AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1238710


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1238710 MtrunA17_Chr8g0350161 97.568 370 4 2 1 366 1 369 0.0 713
Msa1238710 MtrunA17_Chr7g0266491 33.444 302 188 5 66 365 70 360 7.00e-39 145
Msa1238710 MtrunA17_Chr2g0333241 32.082 293 181 6 76 365 18 295 5.22e-34 130
Msa1238710 MtrunA17_Chr4g0003161 30.508 295 189 4 73 365 15 295 1.56e-33 130
Msa1238710 MtrunA17_Chr4g0073891 29.730 296 179 7 91 365 343 630 3.21e-21 95.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1238710 AT2G45770.1 79.235 366 74 2 1 365 1 365 0.0 577
Msa1238710 AT5G03940.1 35.664 286 172 4 82 365 95 370 1.37e-41 153
Msa1238710 AT1G15310.1 32.653 294 178 6 76 365 18 295 1.48e-35 135
Msa1238710 AT1G48900.2 30.450 289 185 5 76 362 18 292 3.55e-32 125
Msa1238710 AT1G48900.1 30.137 292 188 5 76 365 18 295 2.79e-31 124
Msa1238710 AT5G49500.1 28.289 304 199 6 66 365 9 297 1.03e-27 114
Msa1238710 AT5G49500.2 32.584 178 113 2 188 365 5 175 1.67e-22 97.8
Msa1238710 AT4G30600.2 30.667 300 177 8 89 365 342 633 1.18e-21 97.1
Msa1238710 AT4G30600.1 30.667 300 177 8 89 365 342 633 1.18e-21 97.1

Find 118 sgRNAs with CRISPR-Local

Find 552 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAAGATTGTAGAGAATTTA+AGG 0.111402 8_2:+19359423 Msa1238710:CDS
TACATACCAAAGCCTATTTA+TGG 0.132553 8_2:-19365697 None:intergenic
GCTTTATTAGTTTCTGATTT+TGG 0.146686 8_2:+19359386 Msa1238710:CDS
TTGATGAGCTTCTTCTTTAT+TGG 0.152429 8_2:+19359226 Msa1238710:CDS
CTCTTCCATTAGCCTGTAAT+TGG 0.202802 8_2:-19363636 None:intergenic
GGAGAGATTGTTACGAGTTT+TGG 0.248300 8_2:-19359199 None:intergenic
TTAAGGGAGGATATACTTTC+TGG 0.258111 8_2:+19359440 Msa1238710:CDS
GGACAGGTTGTGGGTGTAAC+TGG 0.259487 8_2:+19365381 Msa1238710:intron
GAAGCTTGTCCTCTCAATTA+TGG 0.270209 8_2:-19367246 None:intergenic
TGCTTTGTGGTTGGCAGTTT+CGG 0.271943 8_2:+19367347 Msa1238710:three_prime_UTR
GCAGGAGATCTTACTGGTTC+TGG 0.276643 8_2:+19364792 Msa1238710:intron
AGAGTTAATTTCTTGTAAAA+AGG 0.283124 8_2:+19363655 Msa1238710:CDS
ACGAATGTTTCACGAATCTT+AGG 0.290102 8_2:+19367687 Msa1238710:three_prime_UTR
CAGGTTTACACACCAATTAC+AGG 0.291032 8_2:+19363624 Msa1238710:intron
TGCTCCGCCGCCGGTGAAAC+TGG 0.319936 8_2:+19359102 Msa1238710:CDS
AGCACTGAAGAAGAATGTTT+TGG 0.320378 8_2:+19361452 Msa1238710:CDS
ATTTGTACCTGCTGATGCTT+TGG 0.322384 8_2:-19363305 None:intergenic
CTAGTGATCAGCTAGAAATA+TGG 0.333355 8_2:+19363236 Msa1238710:CDS
TAAATCAGGGAGTGAGATTA+AGG 0.344186 8_2:+19359469 Msa1238710:CDS
AAGATGAGGAATTGTGGTTT+TGG 0.349517 8_2:-19359030 None:intergenic
TGGCGGGAAGACAACATCTT+TGG 0.352330 8_2:+19361663 Msa1238710:CDS
CTGAACTTCAACTTGGATAT+AGG 0.353693 8_2:+19361502 Msa1238710:CDS
TAAGATTGTAGAGAATTTAA+GGG 0.354233 8_2:+19359424 Msa1238710:CDS
AACACCAACTATCATTATTA+CGG 0.358526 8_2:-19361635 None:intergenic
ATGCTTGCAGGAGATCTTAC+TGG 0.362667 8_2:+19364786 Msa1238710:intron
CGAAGCTATTCTTGCTTTGA+AGG 0.366512 8_2:+19367297 Msa1238710:three_prime_UTR
TGTAAACCATAAATAGGCTT+TGG 0.372692 8_2:+19365691 Msa1238710:exon
CTTTCTGGGAAGCTTAAATC+AGG 0.373488 8_2:+19359455 Msa1238710:CDS
ATAATGATAGTTGGTGTTAA+TGG 0.374585 8_2:+19361640 Msa1238710:CDS
ATGGGGTTTATTTCCACTCT+TGG 0.377556 8_2:+19367384 Msa1238710:three_prime_UTR
CTGGTTCTGGATGGAACTAC+TGG 0.380978 8_2:+19364805 Msa1238710:CDS
ATTTACTTCATTGAATTCTC+TGG 0.387565 8_2:-19364848 None:intergenic
CAGTTATTGACAAATAATAA+TGG 0.388395 8_2:-19367485 None:intergenic
GCTCAACCACACTGCAGAAA+TGG 0.401090 8_2:+19358966 Msa1238710:exon
TGCTTTGAAGGAAGCTCAGC+TGG 0.409080 8_2:+19367309 Msa1238710:three_prime_UTR
GAAATATGGGCTGAAAGGAC+TGG 0.422519 8_2:+19363250 Msa1238710:CDS
TTTGTCTTGGGACAGGTTGT+GGG 0.424495 8_2:+19365372 Msa1238710:intron
ACACACCAATTACAGGCTAA+TGG 0.426484 8_2:+19363631 Msa1238710:CDS
GGCGGGAAGACAACATCTTT+GGG 0.437333 8_2:+19361664 Msa1238710:CDS
CCTCTGCATCGAAGGGTTGA+AGG 0.441432 8_2:-19365647 None:intergenic
GGGTTTGGTTTGAAATGGGG+AGG 0.443567 8_2:-19359055 None:intergenic
TAACCCCTTTGCATGCTTTG+TGG 0.450371 8_2:+19367334 Msa1238710:three_prime_UTR
CCTGTAAAATTTGTTGGTGT+TGG 0.450968 8_2:+19365609 Msa1238710:CDS
GGAATCCCTGTAAAATTTGT+TGG 0.460807 8_2:+19365603 Msa1238710:CDS
AAAATTCTACCAGATATTGT+TGG 0.466991 8_2:+19363186 Msa1238710:intron
GAACATGAAGAGTGAACATA+TGG 0.467626 8_2:+19367461 Msa1238710:three_prime_UTR
TAAGGGAGGATATACTTTCT+GGG 0.477748 8_2:+19359441 Msa1238710:CDS
GGCGGCGGAGCATGTGAAAC+GGG 0.482249 8_2:-19359091 None:intergenic
CCCTTTGCATGCTTTGTGGT+TGG 0.482595 8_2:+19367338 Msa1238710:three_prime_UTR
GTGAAACGGGTTCGAGATGA+GGG 0.485870 8_2:-19359078 None:intergenic
TCGGACAATACTACAATGAT+GGG 0.488340 8_2:+19367366 Msa1238710:three_prime_UTR
GGTCAGTGTGGTTGATGAGC+TGG 0.490176 8_2:+19365581 Msa1238710:intron
GCTGTTGCTAAAGTAGTTGC+TGG 0.491147 8_2:+19363677 Msa1238710:CDS
AGCTAGAAATATGGGCTGAA+AGG 0.492518 8_2:+19363245 Msa1238710:CDS
CCAACTATCATTATTACGGC+TGG 0.492849 8_2:-19361631 None:intergenic
CCAACCACAAAGCATGCAAA+GGG 0.493705 8_2:-19367338 None:intergenic
TTCGGACAATACTACAATGA+TGG 0.494840 8_2:+19367365 Msa1238710:three_prime_UTR
GACAAAGGCCTCTGCATCGA+AGG 0.495480 8_2:-19365655 None:intergenic
CGGCCGGTTACTAAAAGAAA+AGG 0.498498 8_2:+19359140 Msa1238710:CDS
CTTTCTTCAACTTCTCAATG+AGG 0.499357 8_2:+19367528 Msa1238710:three_prime_UTR
TAGTGATCAGCTAGAAATAT+GGG 0.501137 8_2:+19363237 Msa1238710:CDS
ATTGTATTATGTGATACATC+TGG 0.501382 8_2:+19363513 Msa1238710:CDS
TACCAGATATTGTTGGCAGC+TGG 0.506306 8_2:+19363193 Msa1238710:intron
CTCATTGAGAAGTTGAAGAA+AGG 0.512308 8_2:-19367527 None:intergenic
AAATATGGGCTGAAAGGACT+GGG 0.523298 8_2:+19363251 Msa1238710:CDS
CGTTTCACATGCTCCGCCGC+CGG 0.524530 8_2:+19359093 Msa1238710:CDS
CGGCGGCGGAGCATGTGAAA+CGG 0.530454 8_2:-19359092 None:intergenic
GAGAGGACAAGCTTCGCAAA+AGG 0.536140 8_2:+19367254 Msa1238710:three_prime_UTR
TGAAACGGGTTCGAGATGAG+GGG 0.538865 8_2:-19359077 None:intergenic
CGAATATGCTGAGCAACACT+AGG 0.541197 8_2:+19367192 Msa1238710:three_prime_UTR
CTGGCTTATAGATTGAAGAA+TGG 0.541325 8_2:+19361949 Msa1238710:CDS
ATTGAAGAATGGAGGTGCTA+AGG 0.542507 8_2:+19361960 Msa1238710:CDS
ATAGTTGGTGTTAATGGTGG+CGG 0.543515 8_2:+19361646 Msa1238710:CDS
TGTGAATAGACCAGTTTCAC+CGG 0.543773 8_2:-19359112 None:intergenic
TCATTGAATTCTCTGGCTTG+TGG 0.544319 8_2:-19364841 None:intergenic
TAGACCAGTTTCACCGGCGG+CGG 0.551496 8_2:-19359106 None:intergenic
TTCAAGTTCAATGCCAAGAG+TGG 0.551912 8_2:-19367397 None:intergenic
GTCTATTCACAAAACTCGGC+CGG 0.553966 8_2:+19359124 Msa1238710:CDS
GAGAAATCCAAAGCATCAGC+AGG 0.562472 8_2:+19363298 Msa1238710:CDS
AGTAAAACTGAACTTCAACT+TGG 0.564527 8_2:+19361495 Msa1238710:CDS
AAATTTGTTGGTGTTGGTGA+AGG 0.564716 8_2:+19365615 Msa1238710:CDS
GTCAGTGTGGTTGATGAGCT+GGG 0.566152 8_2:+19365582 Msa1238710:CDS
GATTGTAGAGAATTTAAGGG+AGG 0.567119 8_2:+19359427 Msa1238710:CDS
AATGTTTCACGAATCTTAGG+TGG 0.568595 8_2:+19367690 Msa1238710:three_prime_UTR
TGTGAAACGGGTTCGAGATG+AGG 0.574121 8_2:-19359079 None:intergenic
TTTGGATTTGTTAAGCAACA+AGG 0.578155 8_2:+19361470 Msa1238710:CDS
AAGCTGGATGGTTCTGCAAG+AGG 0.579304 8_2:+19365417 Msa1238710:CDS
CTCGGGACAACTTTCGAACA+AGG 0.581771 8_2:+19367576 Msa1238710:three_prime_UTR
CCAGCCGTAATAATGATAGT+TGG 0.582690 8_2:+19361631 Msa1238710:CDS
TCTTGCAGAACCATCCAGCT+TGG 0.585467 8_2:-19365415 None:intergenic
AAGAAGAAGCTCATCAATGA+CGG 0.586886 8_2:-19359220 None:intergenic
CCTTCAACCCTTCGATGCAG+AGG 0.587775 8_2:+19365647 Msa1238710:CDS
GCCAACCACAAAGCATGCAA+AGG 0.588604 8_2:-19367339 None:intergenic
TCATTTAATCCATAATTGAG+AGG 0.588721 8_2:+19367237 Msa1238710:three_prime_UTR
TTGGATTTGTTAAGCAACAA+GGG 0.588870 8_2:+19361471 Msa1238710:CDS
GAAATGGGGAGGTGAAGATG+AGG 0.589668 8_2:-19359044 None:intergenic
GAGATCTTACTGGTTCTGGA+TGG 0.592324 8_2:+19364796 Msa1238710:CDS
GAAACGGGTTCGAGATGAGG+GGG 0.597458 8_2:-19359076 None:intergenic
AGTTCTTGATGAACTCGAAG+AGG 0.599876 8_2:+19359269 Msa1238710:CDS
ACTGGTCTATTCACAAAACT+CGG 0.602723 8_2:+19359120 Msa1238710:CDS
TAGTTGGTGTTAATGGTGGC+GGG 0.606074 8_2:+19361647 Msa1238710:CDS
TGGATTTGTTAAGCAACAAG+GGG 0.614912 8_2:+19361472 Msa1238710:CDS
ACAAAGGCCTCTGCATCGAA+GGG 0.616242 8_2:-19365654 None:intergenic
GAGGCGGTTGAATGAAGCAG+AGG 0.618672 8_2:-19358998 None:intergenic
TTGTAGCCATTTCTGCAGTG+TGG 0.620189 8_2:-19358972 None:intergenic
TTTCTGGGAAGCTTAAATCA+GGG 0.624720 8_2:+19359456 Msa1238710:CDS
GAGGTGAAGATGAGGAATTG+TGG 0.629913 8_2:-19359036 None:intergenic
CTGGATGGTTCTGCAAGAGG+TGG 0.633895 8_2:+19365420 Msa1238710:CDS
AAACGGGTTCGAGATGAGGG+GGG 0.640952 8_2:-19359075 None:intergenic
CGGACAATACTACAATGATG+GGG 0.643389 8_2:+19367367 Msa1238710:three_prime_UTR
ATGATAGTTGGTGTTAATGG+TGG 0.644334 8_2:+19361643 Msa1238710:CDS
TATTTCTAGCTGATCACTAG+CGG 0.649322 8_2:-19363233 None:intergenic
GCTTATAGATTGAAGAATGG+AGG 0.650080 8_2:+19361952 Msa1238710:CDS
GACTGGGTGTGAGATTGTTG+TGG 0.655858 8_2:+19363267 Msa1238710:CDS
TTCTGCAAGAGGTGGCTGTG+TGG 0.671813 8_2:+19365428 Msa1238710:CDS
GAATAGACCAGTTTCACCGG+CGG 0.703416 8_2:-19359109 None:intergenic
TTACTGTTGGCAGGTCAGTG+TGG 0.716550 8_2:+19365569 Msa1238710:intron
CAACCACAAAGCATGCAAAG+GGG 0.738803 8_2:-19367337 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATAATAATATAATAATA+AGG - chr8_2:19363407-19363426 None:intergenic 0.0%
!! TATTATTATATTATTATATA+TGG + chr8_2:19363407-19363426 Msa1238710:intron 0.0%
!!! TATTATTATGACTTTTATAA+TGG - chr8_2:19360010-19360029 None:intergenic 10.0%
!! ATTTAAATAATAAATACTAG+TGG + chr8_2:19360842-19360861 Msa1238710:intron 10.0%
!! CTTAGTAAAATAATATAATA+AGG - chr8_2:19360957-19360976 None:intergenic 10.0%
!! TTATAAATATTTGACTATAT+AGG + chr8_2:19361319-19361338 Msa1238710:intron 10.0%
!!! TTAATTGTTTTTCTATTTTT+GGG + chr8_2:19365087-19365106 Msa1238710:intron 10.0%
!!! ATCTCTTAATTTTTTTTTTT+AGG + chr8_2:19365480-19365499 Msa1238710:intron 10.0%
!!! AATTATTTTTATTTCTATCA+AGG + chr8_2:19365527-19365546 Msa1238710:intron 10.0%
!!! ATTATTTTTATTTCTATCAA+GGG + chr8_2:19365528-19365547 Msa1238710:intron 10.0%
!!! TATGCTTTAAAATAAAAAAA+GGG - chr8_2:19366126-19366145 None:intergenic 10.0%
!!! CTAAAATTTAAAACAAAAAA+TGG + chr8_2:19367036-19367055 Msa1238710:intron 10.0%
!! AATATACTCTTATTATTATT+TGG + chr8_2:19367129-19367148 Msa1238710:intron 10.0%
!!! CTTTGTTTATTAATTATTAC+AGG + chr8_2:19359364-19359383 Msa1238710:intron 15.0%
!!! ACAATCTTAATAGTAATTTT+CGG - chr8_2:19359413-19359432 None:intergenic 15.0%
!!! TGTATTGATAATCATATTAT+AGG - chr8_2:19360777-19360796 None:intergenic 15.0%
!! ATGATTATCAATACAAATAT+TGG + chr8_2:19360782-19360801 Msa1238710:intron 15.0%
!! CTATATAGGATATTTATTTA+TGG + chr8_2:19361333-19361352 Msa1238710:intron 15.0%
!!! TTCAATTTTTATGATATGAA+TGG + chr8_2:19361421-19361440 Msa1238710:intron 15.0%
!! TTGAATTAAATTTCATTTAC+AGG + chr8_2:19361605-19361624 Msa1238710:intron 15.0%
!!! ATTGTTGATTCTATTATTTA+TGG + chr8_2:19361702-19361721 Msa1238710:intron 15.0%
!! TTACGTATATTATGTAATTA+AGG + chr8_2:19362143-19362162 Msa1238710:intron 15.0%
!! ATAAAAAGACAAACAATAAA+TGG + chr8_2:19362581-19362600 Msa1238710:intron 15.0%
!! AAAACTTATAAAGTGATAAA+CGG - chr8_2:19363356-19363375 None:intergenic 15.0%
!!! TTATATTGTTATCTTCTTTT+TGG + chr8_2:19363860-19363879 Msa1238710:intron 15.0%
!!! TCTAAAATTGTATGAATTAA+CGG + chr8_2:19364756-19364775 Msa1238710:intron 15.0%
!! CAAAAATAGAAAAACAATTA+AGG - chr8_2:19365088-19365107 None:intergenic 15.0%
!!! CTTAATTGTTTTTCTATTTT+TGG + chr8_2:19365086-19365105 Msa1238710:intron 15.0%
!! AAAAAATTAAGAGATTATTG+AGG - chr8_2:19365475-19365494 None:intergenic 15.0%
!! AATACAACACAATAAATAAA+AGG - chr8_2:19365920-19365939 None:intergenic 15.0%
!!! GTATGCTTTAAAATAAAAAA+AGG - chr8_2:19366127-19366146 None:intergenic 15.0%
!!! GATTTACATTCTTTAATTTA+AGG + chr8_2:19366452-19366471 Msa1238710:intron 15.0%
!!! TTGTTATTTTGTATATTTGA+GGG + chr8_2:19366481-19366500 Msa1238710:intron 15.0%
!!! TTATGAGTAAATAATCATTT+TGG - chr8_2:19366539-19366558 None:intergenic 15.0%
!!! TACTCATAAATAATTTGTTA+TGG + chr8_2:19366550-19366569 Msa1238710:intron 15.0%
!!! AAGTATAGTTTAAAATAAGA+GGG + chr8_2:19366873-19366892 Msa1238710:intron 15.0%
!! TGAAAAAAATACTAATAGCT+TGG - chr8_2:19359321-19359340 None:intergenic 20.0%
!! TTAAGATTGTAGAGAATTTA+AGG + chr8_2:19359423-19359442 Msa1238710:CDS 20.0%
!! TAAGATTGTAGAGAATTTAA+GGG + chr8_2:19359424-19359443 Msa1238710:CDS 20.0%
!!! ATTAGTTTTTTTTACACAGA+CGG + chr8_2:19359524-19359543 Msa1238710:intron 20.0%
!!! ATACCAAGTAGATATTTTTA+GGG + chr8_2:19359581-19359600 Msa1238710:intron 20.0%
!! CATATTACAATCAATCATAA+CGG - chr8_2:19359865-19359884 None:intergenic 20.0%
!!! ATAAAATTGGTTTGTTTGAT+TGG - chr8_2:19360292-19360311 None:intergenic 20.0%
!! TAATCATATTATAGGTATGA+AGG - chr8_2:19360769-19360788 None:intergenic 20.0%
!! AATAAAAGGATTACTTTCAA+AGG - chr8_2:19360825-19360844 None:intergenic 20.0%
!! AATATTTATAAAATGCAGGA+TGG - chr8_2:19361310-19361329 None:intergenic 20.0%
!! GTCAAATATTTATAAAATGC+AGG - chr8_2:19361314-19361333 None:intergenic 20.0%
!!! TTATTTATGGTTTTAAGTCT+TGG + chr8_2:19361346-19361365 Msa1238710:intron 20.0%
!! TTACTATTTGATAAATGCAA+GGG - chr8_2:19361400-19361419 None:intergenic 20.0%
!! ATTACTATTTGATAAATGCA+AGG - chr8_2:19361401-19361420 None:intergenic 20.0%
!!! TTTATGATATGAATGGTTTT+AGG + chr8_2:19361428-19361447 Msa1238710:intron 20.0%
!!! CCTTTAAAGTTTAAACATTT+TGG - chr8_2:19361812-19361831 None:intergenic 20.0%
!! CCAAAATGTTTAAACTTTAA+AGG + chr8_2:19361809-19361828 Msa1238710:intron 20.0%
!! AGTTAATAGATAATTGTCAA+AGG + chr8_2:19361848-19361867 Msa1238710:intron 20.0%
!! TTCTATATTGTTAATTGCTT+TGG - chr8_2:19361885-19361904 None:intergenic 20.0%
!! ATAAAAGATATCCAATAATG+AGG - chr8_2:19362377-19362396 None:intergenic 20.0%
!!! GCTATTTCTTGTATAAATTT+AGG + chr8_2:19362437-19362456 Msa1238710:intron 20.0%
!! AAAAAATATCTTTAGATCCT+TGG + chr8_2:19362463-19362482 Msa1238710:intron 20.0%
!!! AAACTGTTTAAAATGAGATT+AGG + chr8_2:19362780-19362799 Msa1238710:intron 20.0%
!! TATTGTATACAATAAATGCA+TGG - chr8_2:19362808-19362827 None:intergenic 20.0%
!!! ATTTTAAATGTTTGTGTTGA+GGG - chr8_2:19362984-19363003 None:intergenic 20.0%
!!! AATTTTAAATGTTTGTGTTG+AGG - chr8_2:19362985-19363004 None:intergenic 20.0%
!! AGAAAATATGATATGATCTT+AGG - chr8_2:19363101-19363120 None:intergenic 20.0%
!!! AAGATCATATCATATTTTCT+TGG + chr8_2:19363101-19363120 Msa1238710:intron 20.0%
!! AGAGTTAATTTCTTGTAAAA+AGG + chr8_2:19363655-19363674 Msa1238710:CDS 20.0%
!! ACAAGAAAATTATGATGTAA+AGG - chr8_2:19363784-19363803 None:intergenic 20.0%
!!! AACAAAAAAAGTCTTTAAAG+AGG - chr8_2:19363821-19363840 None:intergenic 20.0%
!! AGAAGATAACAATATAACTT+AGG - chr8_2:19363857-19363876 None:intergenic 20.0%
!! ATGAACAATTATTATGTGAT+GGG + chr8_2:19363933-19363952 Msa1238710:intron 20.0%
!!! TTTTTATTCTTCAAACAAAG+TGG + chr8_2:19364044-19364063 Msa1238710:intron 20.0%
!!! TTTTATTCTTCAAACAAAGT+GGG + chr8_2:19364045-19364064 Msa1238710:intron 20.0%
!!! AACACAATCTTTTTTTAATG+AGG + chr8_2:19364195-19364214 Msa1238710:intron 20.0%
!!! TGCATTGATTAATAGATAAA+TGG - chr8_2:19364337-19364356 None:intergenic 20.0%
!! AATATACAAAAAAGATGCTA+GGG - chr8_2:19364577-19364596 None:intergenic 20.0%
!! AAATATACAAAAAAGATGCT+AGG - chr8_2:19364578-19364597 None:intergenic 20.0%
!! AGTACAATTTCATATTTGAT+AGG + chr8_2:19364599-19364618 Msa1238710:intron 20.0%
!! AAATAGAAAAACAATTAAGG+CGG - chr8_2:19365085-19365104 None:intergenic 20.0%
!! TATTTCGATATTTGGTATTA+CGG + chr8_2:19365297-19365316 Msa1238710:intron 20.0%
!! ATTTATGGTTTACAGAAAAA+TGG - chr8_2:19365685-19365704 None:intergenic 20.0%
!!! TTTTTCTGTAAACCATAAAT+AGG + chr8_2:19365685-19365704 Msa1238710:exon 20.0%
!! ATCATATATTGAATAGTGAA+GGG - chr8_2:19365804-19365823 None:intergenic 20.0%
!! AATCATATATTGAATAGTGA+AGG - chr8_2:19365805-19365824 None:intergenic 20.0%
!! CACTATTCAATATATGATTA+CGG + chr8_2:19365806-19365825 Msa1238710:intron 20.0%
!! TTTAAACTTCATTAAGAGAA+GGG - chr8_2:19366090-19366109 None:intergenic 20.0%
!! ATTTAAACTTCATTAAGAGA+AGG - chr8_2:19366091-19366110 None:intergenic 20.0%
!! TAACAATATTCCTTTCTTAA+AGG - chr8_2:19366158-19366177 None:intergenic 20.0%
!!! TTTTAGTCATTGAAATTGTA+AGG + chr8_2:19366221-19366240 Msa1238710:intron 20.0%
!! TTTAGTCATTGAAATTGTAA+GGG + chr8_2:19366222-19366241 Msa1238710:intron 20.0%
!!! AAATTGCTATTTCGTAAATT+TGG - chr8_2:19366265-19366284 None:intergenic 20.0%
!!! TGTTTACTAAAGAAACATTT+TGG + chr8_2:19366414-19366433 Msa1238710:intron 20.0%
!!! GTTGTTATTTTGTATATTTG+AGG + chr8_2:19366480-19366499 Msa1238710:intron 20.0%
!!! ATATGAAAGTGAACAATTTT+AGG + chr8_2:19366644-19366663 Msa1238710:intron 20.0%
!!! TGGTAATAAAGTTTTTAGAT+TGG + chr8_2:19366729-19366748 Msa1238710:intron 20.0%
!!! ATAAACAAAACTTTTAGCAA+GGG - chr8_2:19366823-19366842 None:intergenic 20.0%
!!! TATAAACAAAACTTTTAGCA+AGG - chr8_2:19366824-19366843 None:intergenic 20.0%
!!! GAAGTATAGTTTAAAATAAG+AGG + chr8_2:19366872-19366891 Msa1238710:intron 20.0%
!!! AAAATGGATAATCACATTTT+TGG + chr8_2:19367052-19367071 Msa1238710:intron 20.0%
!!! AAATGGATAATCACATTTTT+GGG + chr8_2:19367053-19367072 Msa1238710:intron 20.0%
!!! TTATTATTATTTGGTTTACC+AGG + chr8_2:19367138-19367157 Msa1238710:intron 20.0%
!!! AAAAGGTGAAAATGATTTTT+GGG + chr8_2:19367271-19367290 Msa1238710:three_prime_UTR 20.0%
!! CAGTTATTGACAAATAATAA+TGG - chr8_2:19367488-19367507 None:intergenic 20.0%
!!! GCTTTATTAGTTTCTGATTT+TGG + chr8_2:19359386-19359405 Msa1238710:CDS 25.0%
! CTAAAAATATCTACTTGGTA+TGG - chr8_2:19359582-19359601 None:intergenic 25.0%
!! CATACCAAGTAGATATTTTT+AGG + chr8_2:19359580-19359599 Msa1238710:intron 25.0%
! TATCCCTAAAAATATCTACT+TGG - chr8_2:19359587-19359606 None:intergenic 25.0%
! AATGAACTTACCTATAAAGA+TGG + chr8_2:19359610-19359629 Msa1238710:intron 25.0%
!! TGCATGTAAGAAATTTTACA+TGG + chr8_2:19359729-19359748 Msa1238710:intron 25.0%
! TTGGATTTAATTGAATTGTG+CGG + chr8_2:19359910-19359929 Msa1238710:intron 25.0%
! TCAGCAATTGTAATTGATAA+CGG - chr8_2:19359957-19359976 None:intergenic 25.0%
!!! TTACAAAGTTGTTGATTTCT+TGG - chr8_2:19360150-19360169 None:intergenic 25.0%
! TGTTGAAGATACAATCATTT+CGG + chr8_2:19360223-19360242 Msa1238710:intron 25.0%
!!! TAAATGCTTTTGGAAACATT+TGG + chr8_2:19360346-19360365 Msa1238710:intron 25.0%
! TACTTTCAAAAATTGTAGCT+TGG - chr8_2:19360415-19360434 None:intergenic 25.0%
!!! AGCTACAATTTTTGAAAGTA+TGG + chr8_2:19360415-19360434 Msa1238710:intron 25.0%
! ATGACAGTGAATAAACTATT+AGG + chr8_2:19360588-19360607 Msa1238710:intron 25.0%
! GTATGAAGAAAATTTGATAG+AGG + chr8_2:19360695-19360714 Msa1238710:intron 25.0%
!!! CAAACTATTTTTTTTAGCCA+AGG + chr8_2:19361012-19361031 Msa1238710:intron 25.0%
! AACACCAACTATCATTATTA+CGG - chr8_2:19361638-19361657 None:intergenic 25.0%
!!! ATAATGATAGTTGGTGTTAA+TGG + chr8_2:19361640-19361659 Msa1238710:CDS 25.0%
! ATTCTATTATTTATGGAGCA+AGG + chr8_2:19361709-19361728 Msa1238710:intron 25.0%
! AACTTAAAGAAAATCTTTCC+AGG - chr8_2:19361779-19361798 None:intergenic 25.0%
! TATATTGTTAATTGCTTTGG+AGG - chr8_2:19361882-19361901 None:intergenic 25.0%
!! TTATACTGTGAGTTTTTCTT+TGG + chr8_2:19361988-19362007 Msa1238710:intron 25.0%
! AGTAGATTACTTTATACCTA+AGG - chr8_2:19362197-19362216 None:intergenic 25.0%
! TATACTCAAATGAGAAAAGA+GGG + chr8_2:19362495-19362514 Msa1238710:intron 25.0%
!!! CAAACAATAAATGGTTTTAC+AGG + chr8_2:19362590-19362609 Msa1238710:intron 25.0%
!!! AAATGGTTTTACAGGAAAAT+TGG + chr8_2:19362598-19362617 Msa1238710:intron 25.0%
! AGTATAAAACATATACACTG+GGG - chr8_2:19363010-19363029 None:intergenic 25.0%
! CAGTATAAAACATATACACT+GGG - chr8_2:19363011-19363030 None:intergenic 25.0%
! ACAGTATAAAACATATACAC+TGG - chr8_2:19363012-19363031 None:intergenic 25.0%
! AAAATTCTACCAGATATTGT+TGG + chr8_2:19363186-19363205 Msa1238710:intron 25.0%
! ATTGTATTATGTGATACATC+TGG + chr8_2:19363513-19363532 Msa1238710:CDS 25.0%
!! ACGTAAGTACTAAACTTTTA+CGG + chr8_2:19363536-19363555 Msa1238710:intron 25.0%
!!! CTGTTTTGAACTTTAATACT+TGG + chr8_2:19363563-19363582 Msa1238710:intron 25.0%
!!! TTATCTTCTTTTTGGTTTTC+TGG + chr8_2:19363868-19363887 Msa1238710:intron 25.0%
!! TAAGGTTTTTGACATTTATG+TGG + chr8_2:19363904-19363923 Msa1238710:intron 25.0%
! GATGAACAATTATTATGTGA+TGG + chr8_2:19363932-19363951 Msa1238710:intron 25.0%
! TGAACAATTATTATGTGATG+GGG + chr8_2:19363934-19363953 Msa1238710:intron 25.0%
! TATATCTTCAAACATGACAT+TGG + chr8_2:19364073-19364092 Msa1238710:intron 25.0%
! ATTTACTTCATTGAATTCTC+TGG - chr8_2:19364851-19364870 None:intergenic 25.0%
! AAAATAACAAATTTCCCAAC+AGG - chr8_2:19364911-19364930 None:intergenic 25.0%
! GCATAATATTATTTCAGTAG+AGG + chr8_2:19365109-19365128 Msa1238710:intron 25.0%
!! ATAACACTCACTCTTTTATT+GGG - chr8_2:19365240-19365259 None:intergenic 25.0%
!! TATAACACTCACTCTTTTAT+TGG - chr8_2:19365241-19365260 None:intergenic 25.0%
!!! ATGAAGTTTCTTTTTTGTCT+TGG + chr8_2:19365359-19365378 Msa1238710:intron 25.0%
!!! TGAAGTTTCTTTTTTGTCTT+GGG + chr8_2:19365360-19365379 Msa1238710:intron 25.0%
!!! TTTTATTTCTATCAAGGGTA+AGG + chr8_2:19365533-19365552 Msa1238710:intron 25.0%
! AATAAGATGCTAATTACTGT+TGG + chr8_2:19365556-19365575 Msa1238710:intron 25.0%
! AAGATATAACCATACTCTTT+CGG + chr8_2:19365834-19365853 Msa1238710:intron 25.0%
! ATTTATTGTGTTGTATTGCT+AGG + chr8_2:19365923-19365942 Msa1238710:intron 25.0%
! AATGAAGTTTAAATTTACGC+TGG + chr8_2:19366097-19366116 Msa1238710:intron 25.0%
! TTAGTCATTGAAATTGTAAG+GGG + chr8_2:19366223-19366242 Msa1238710:intron 25.0%
!! ATTTAGCACTACAATTTTAC+TGG + chr8_2:19366320-19366339 Msa1238710:intron 25.0%
! TAAACTACACTTTCTTTATC+TGG - chr8_2:19367014-19367033 None:intergenic 25.0%
! TCATTTAATCCATAATTGAG+AGG + chr8_2:19367237-19367256 Msa1238710:three_prime_UTR 25.0%
!! CAAAAGGTGAAAATGATTTT+TGG + chr8_2:19367270-19367289 Msa1238710:three_prime_UTR 25.0%
!! AAAGGTGAAAATGATTTTTG+GGG + chr8_2:19367272-19367291 Msa1238710:three_prime_UTR 25.0%
!!! TTTCATTGTTTTTGTCATCT+CGG + chr8_2:19367558-19367577 Msa1238710:three_prime_UTR 25.0%
! TTGCCTTTTCTTTTAGTAAC+CGG - chr8_2:19359146-19359165 None:intergenic 30.0%
TTGATGAGCTTCTTCTTTAT+TGG + chr8_2:19359226-19359245 Msa1238710:CDS 30.0%
ATTGAATAAGAGGAACGAAA+AGG - chr8_2:19359297-19359316 None:intergenic 30.0%
ATAGCTTGGAATTGAATAAG+AGG - chr8_2:19359307-19359326 None:intergenic 30.0%
!!! AGTGTCGCATACTTTTTTTT+TGG + chr8_2:19359891-19359910 Msa1238710:intron 30.0%
TTGTATAGGAATGTGATTTG+TGG + chr8_2:19360085-19360104 Msa1238710:intron 30.0%
ACAACTTTGTAATGAGCATT+AGG + chr8_2:19360158-19360177 Msa1238710:intron 30.0%
TTGACAGCATCTCATAAAAT+TGG - chr8_2:19360305-19360324 None:intergenic 30.0%
!! ATGTTTCCAAAAGCATTTAC+AGG - chr8_2:19360345-19360364 None:intergenic 30.0%
TTGTTGTCTTATACATAAGG+TGG - chr8_2:19360538-19360557 None:intergenic 30.0%
CTGTTGTTGTCTTATACATA+AGG - chr8_2:19360541-19360560 None:intergenic 30.0%
TCATACACAAAAACTCAAGT+TGG - chr8_2:19360681-19360700 None:intergenic 30.0%
! AAGGATACCGAAAAATGTTT+TGG + chr8_2:19360885-19360904 Msa1238710:intron 30.0%
!!! TTTTTTTTAGCCAAGGAGTT+TGG + chr8_2:19361019-19361038 Msa1238710:intron 30.0%
TTTCTAACATTCTCATGTTG+TGG - chr8_2:19361066-19361085 None:intergenic 30.0%
!!! TATGGTTTTAAGTCTTGGTA+CGG + chr8_2:19361351-19361370 Msa1238710:intron 30.0%
!! TTTGGATTTGTTAAGCAACA+AGG + chr8_2:19361470-19361489 Msa1238710:CDS 30.0%
!! TTGGATTTGTTAAGCAACAA+GGG + chr8_2:19361471-19361490 Msa1238710:CDS 30.0%
AGTAAAACTGAACTTCAACT+TGG + chr8_2:19361495-19361514 Msa1238710:CDS 30.0%
!!! TTATCAAATCGGTTTGGTTT+TGG - chr8_2:19361910-19361929 None:intergenic 30.0%
AAAAGCTTATCAAATCGGTT+TGG - chr8_2:19361916-19361935 None:intergenic 30.0%
CAAGGAAAAGCTTATCAAAT+CGG - chr8_2:19361921-19361940 None:intergenic 30.0%
ATCTAGATTGTTAAACTAGC+TGG + chr8_2:19362086-19362105 Msa1238710:intron 30.0%
!!! CAACTTTTGGCTTTAGTTTA+GGG + chr8_2:19362288-19362307 Msa1238710:intron 30.0%
! TTTTATGACTCTACTTGTAG+AGG + chr8_2:19362391-19362410 Msa1238710:intron 30.0%
!! GAGGATATTTTTGTCTCATT+TGG + chr8_2:19362410-19362429 Msa1238710:intron 30.0%
CTATACTCAAATGAGAAAAG+AGG + chr8_2:19362494-19362513 Msa1238710:intron 30.0%
TTGTATCATATCTTGCAAAC+AGG + chr8_2:19362831-19362850 Msa1238710:intron 30.0%
TGTATCATATCTTGCAAACA+GGG + chr8_2:19362832-19362851 Msa1238710:intron 30.0%
TTTGTGTAGTTCAAAACACA+CGG + chr8_2:19362913-19362932 Msa1238710:intron 30.0%
TTCTTTCTCATATCCAATTG+AGG + chr8_2:19363063-19363082 Msa1238710:intron 30.0%
GTACTAAAAATCACCTCAAT+TGG - chr8_2:19363079-19363098 None:intergenic 30.0%
! CAATATCTGGTAGAATTTTG+AGG - chr8_2:19363185-19363204 None:intergenic 30.0%
TAGTGATCAGCTAGAAATAT+GGG + chr8_2:19363237-19363256 Msa1238710:CDS 30.0%
TTTGAACTTTAATACTTGGC+AGG + chr8_2:19363567-19363586 Msa1238710:intron 30.0%
GGTGTTTATGTTATATTCTC+AGG + chr8_2:19363605-19363624 Msa1238710:intron 30.0%
ATGATTTACTAGCAGAAAGA+TGG - chr8_2:19363748-19363767 None:intergenic 30.0%
!! TCTGGAAATTTTGAGTAGTA+AGG + chr8_2:19363886-19363905 Msa1238710:intron 30.0%
ATATAAGTTCCCAATTCTGA+AGG - chr8_2:19364105-19364124 None:intergenic 30.0%
CTTATATCTTAACTCCATGT+AGG + chr8_2:19364118-19364137 Msa1238710:intron 30.0%
! TCTTGTGAATTTTACAGCAA+TGG + chr8_2:19364149-19364168 Msa1238710:intron 30.0%
TTAGAACTAGCTGAAATTCT+AGG + chr8_2:19364219-19364238 Msa1238710:intron 30.0%
! ATTACAGTGTTTTCTGATGA+TGG + chr8_2:19364255-19364274 Msa1238710:intron 30.0%
! TTACAGTGTTTTCTGATGAT+GGG + chr8_2:19364256-19364275 Msa1238710:intron 30.0%
AAAGACACAAATATGATCCA+TGG - chr8_2:19364554-19364573 None:intergenic 30.0%
!!! TGTGTTTTAAGAGTATGTGA+TGG + chr8_2:19364675-19364694 Msa1238710:intron 30.0%
AGAGATAAAAAAGATGCTCA+GGG - chr8_2:19364712-19364731 None:intergenic 30.0%
CACCATATGAAAATACCATT+TGG + chr8_2:19364958-19364977 Msa1238710:intron 30.0%
! TGCCAAATGGTATTTTCATA+TGG - chr8_2:19364963-19364982 None:intergenic 30.0%
! AACTCTCTCTACTCTTTTAT+CGG + chr8_2:19365157-19365176 Msa1238710:intron 30.0%
GGGCAAAATCCATATTATAT+GGG + chr8_2:19365178-19365197 Msa1238710:intron 30.0%
TTATTGGGTGAAATCAATGT+GGG - chr8_2:19365225-19365244 None:intergenic 30.0%
TTTATTGGGTGAAATCAATG+TGG - chr8_2:19365226-19365245 None:intergenic 30.0%
CTCTTCTCTATTTCGATATT+TGG + chr8_2:19365289-19365308 Msa1238710:intron 30.0%
AAAGCTAATATGAAACTGCA+AGG - chr8_2:19365326-19365345 None:intergenic 30.0%
! CAACACCAACAAATTTTACA+GGG - chr8_2:19365611-19365630 None:intergenic 30.0%
TGTAAACCATAAATAGGCTT+TGG + chr8_2:19365691-19365710 Msa1238710:exon 30.0%
TACATACCAAAGCCTATTTA+TGG - chr8_2:19365700-19365719 None:intergenic 30.0%
AATTCAGACTTCAATGTGAA+TGG - chr8_2:19365746-19365765 None:intergenic 30.0%
!! TTGCTATTTGACAACTTATC+TGG + chr8_2:19365893-19365912 Msa1238710:intron 30.0%
TCAATATGCAAGTCTTTGAT+AGG + chr8_2:19366381-19366400 Msa1238710:intron 30.0%
ATTAAAAATGTCCTAGAGAG+AGG + chr8_2:19366763-19366782 Msa1238710:intron 30.0%
AATAAGAGGGAAAAACTCAT+TGG + chr8_2:19366886-19366905 Msa1238710:intron 30.0%
AAACACGAGATCAATTTAAG+AGG - chr8_2:19366924-19366943 None:intergenic 30.0%
!!! TTATTTTGGTGTTAGGAGAT+GGG - chr8_2:19366960-19366979 None:intergenic 30.0%
!!! ATTATTTTGGTGTTAGGAGA+TGG - chr8_2:19366961-19366980 None:intergenic 30.0%
!!! TTCCTCATTATTTTGGTGTT+AGG - chr8_2:19366967-19366986 None:intergenic 30.0%
! TTGCACTTTCCTCATTATTT+TGG - chr8_2:19366974-19366993 None:intergenic 30.0%
! TGAACTTGAAGATTTTGTTG+TGG + chr8_2:19367410-19367429 Msa1238710:three_prime_UTR 30.0%
!!! TTCATTGTTTTTGTCATCTC+GGG + chr8_2:19367559-19367578 Msa1238710:three_prime_UTR 30.0%
ACAGTATCCTTATACTGATA+AGG + chr8_2:19367634-19367653 Msa1238710:intron 30.0%
CAGTATCCTTATACTGATAA+GGG + chr8_2:19367635-19367654 Msa1238710:intron 30.0%
! AAGATGAGGAATTGTGGTTT+TGG - chr8_2:19359033-19359052 None:intergenic 35.0%
! ACTGGTCTATTCACAAAACT+CGG + chr8_2:19359120-19359139 Msa1238710:CDS 35.0%
GATGTAGAAAAACTCTTCTC+TGG + chr8_2:19359171-19359190 Msa1238710:CDS 35.0%
AAGAAGAAGCTCATCAATGA+CGG - chr8_2:19359223-19359242 None:intergenic 35.0%
GATTGTAGAGAATTTAAGGG+AGG + chr8_2:19359427-19359446 Msa1238710:CDS 35.0%
TTAAGGGAGGATATACTTTC+TGG + chr8_2:19359440-19359459 Msa1238710:CDS 35.0%
TAAGGGAGGATATACTTTCT+GGG + chr8_2:19359441-19359460 Msa1238710:CDS 35.0%
! TTTCTGGGAAGCTTAAATCA+GGG + chr8_2:19359456-19359475 Msa1238710:CDS 35.0%
TAAATCAGGGAGTGAGATTA+AGG + chr8_2:19359469-19359488 Msa1238710:CDS 35.0%
!! CTCTAAGATGCCATCTTTAT+AGG - chr8_2:19359623-19359642 None:intergenic 35.0%
AGAATGTGGTTGCATTGTAT+AGG + chr8_2:19360071-19360090 Msa1238710:intron 35.0%
!!! ACTGTTTTTTTGAACCGAGA+AGG + chr8_2:19360194-19360213 Msa1238710:intron 35.0%
!! TCTTTTGTTTGGTATTGCTC+TGG - chr8_2:19360267-19360286 None:intergenic 35.0%
AGAGCAATACCAAACAAAAG+AGG + chr8_2:19360266-19360285 Msa1238710:intron 35.0%
!!! TTTGATTGGCCTCTTTTGTT+TGG - chr8_2:19360278-19360297 None:intergenic 35.0%
! GCTATTCCTGTAAATGCTTT+TGG + chr8_2:19360336-19360355 Msa1238710:intron 35.0%
ATCAAGCTAAATGGGAGAAT+GGG - chr8_2:19360374-19360393 None:intergenic 35.0%
!!! GTAGCTTGGCTTTTGATTTA+TGG - chr8_2:19360401-19360420 None:intergenic 35.0%
! TATTCACTGTCATTTCGAAG+TGG - chr8_2:19360581-19360600 None:intergenic 35.0%
!! GAATCTCTAACCACTTTTCT+CGG - chr8_2:19360659-19360678 None:intergenic 35.0%
AAGGTGACTAATCTCAATCA+GGG - chr8_2:19360750-19360769 None:intergenic 35.0%
! TTCTCGGCCAAAACATTTTT+CGG - chr8_2:19360895-19360914 None:intergenic 35.0%
!! TCTTCTAAGGAGTTGTTTCT+CGG - chr8_2:19360911-19360930 None:intergenic 35.0%
ATCAACACATGTGTCTTCTA+AGG - chr8_2:19360924-19360943 None:intergenic 35.0%
!! AGCACTGAAGAAGAATGTTT+TGG + chr8_2:19361452-19361471 Msa1238710:CDS 35.0%
!! TGGATTTGTTAAGCAACAAG+GGG + chr8_2:19361472-19361491 Msa1238710:CDS 35.0%
CTGAACTTCAACTTGGATAT+AGG + chr8_2:19361502-19361521 Msa1238710:CDS 35.0%
!! ATGATAGTTGGTGTTAATGG+TGG + chr8_2:19361643-19361662 Msa1238710:CDS 35.0%
AAAATCTTTCCAGGTACGTA+AGG - chr8_2:19361770-19361789 None:intergenic 35.0%
! TTTGATAAGCTTTTCCTTGC+AGG + chr8_2:19361922-19361941 Msa1238710:intron 35.0%
CTGGCTTATAGATTGAAGAA+TGG + chr8_2:19361949-19361968 Msa1238710:CDS 35.0%
GCTTATAGATTGAAGAATGG+AGG + chr8_2:19361952-19361971 Msa1238710:CDS 35.0%
ATCTACACCAAAAAGTTCGA+TGG + chr8_2:19362023-19362042 Msa1238710:intron 35.0%
! GATATCACCATCGAACTTTT+TGG - chr8_2:19362033-19362052 None:intergenic 35.0%
TTTCCTACTCAGCTTTCTAA+AGG + chr8_2:19362110-19362129 Msa1238710:intron 35.0%
TTGCAATCTGACCATTAATC+AGG + chr8_2:19362171-19362190 Msa1238710:intron 35.0%
TATACCTAAGGCCTGATTAA+TGG - chr8_2:19362185-19362204 None:intergenic 35.0%
AATTATCTCCCATTTCTACC+TGG + chr8_2:19362256-19362275 Msa1238710:intron 35.0%
!!! GCAACTTTTGGCTTTAGTTT+AGG + chr8_2:19362287-19362306 Msa1238710:intron 35.0%
!!! TCAGCCAACTGTTGTTTTAA+CGG + chr8_2:19362312-19362331 Msa1238710:intron 35.0%
AACACCGTTAAAACAACAGT+TGG - chr8_2:19362319-19362338 None:intergenic 35.0%
AGATATCCAATAATGAGGCA+GGG - chr8_2:19362372-19362391 None:intergenic 35.0%
AAGATATCCAATAATGAGGC+AGG - chr8_2:19362373-19362392 None:intergenic 35.0%
ATGAGAAAAGAGGGTCAAAT+AGG + chr8_2:19362504-19362523 Msa1238710:intron 35.0%
AGGAGAGAATCCAATCAAAA+TGG + chr8_2:19362524-19362543 Msa1238710:intron 35.0%
GGAGAGAATCCAATCAAAAT+GGG + chr8_2:19362525-19362544 Msa1238710:intron 35.0%
GAGGAAGAGTAACAACAATT+AGG + chr8_2:19362549-19362568 Msa1238710:intron 35.0%
TCAAAGATGCAACAGAGATT+TGG - chr8_2:19362708-19362727 None:intergenic 35.0%
!! GTGTGTTTTGAACTACACAA+AGG - chr8_2:19362914-19362933 None:intergenic 35.0%
GGATATGAGAAAGAATCTTG+AGG - chr8_2:19363058-19363077 None:intergenic 35.0%
!! TATTTCTAGCTGATCACTAG+CGG - chr8_2:19363236-19363255 None:intergenic 35.0%
CTAGTGATCAGCTAGAAATA+TGG + chr8_2:19363236-19363255 Msa1238710:CDS 35.0%
CTTTCACAAGCTGTAAAAAG+AGG + chr8_2:19363471-19363490 Msa1238710:CDS 35.0%
GTAAAAAGAGGAAAAGAGCT+AGG + chr8_2:19363483-19363502 Msa1238710:CDS 35.0%
GGCAGGTTGTATATTAGTAT+TGG + chr8_2:19363584-19363603 Msa1238710:intron 35.0%
! AAAAGTCTTTAAAGAGGCAG+TGG - chr8_2:19363815-19363834 None:intergenic 35.0%
!! TTGCTTTTGTCCACTTATAC+TGG + chr8_2:19363995-19364014 Msa1238710:intron 35.0%
ACAAGACATGAAAACCTACA+TGG - chr8_2:19364135-19364154 None:intergenic 35.0%
TGTTGCAGCGAACTTTATTA+TGG + chr8_2:19364513-19364532 Msa1238710:intron 35.0%
GGTTATGAGATTATCATCCA+TGG + chr8_2:19364534-19364553 Msa1238710:intron 35.0%
TTTATCCACATTCCGTAAGT+AGG + chr8_2:19364640-19364659 Msa1238710:intron 35.0%
TACATCAACAAGCCTACTTA+CGG - chr8_2:19364655-19364674 None:intergenic 35.0%
GAGAGATAAAAAAGATGCTC+AGG - chr8_2:19364713-19364732 None:intergenic 35.0%
TGTGTTTATCTTCTTCCTGT+TGG + chr8_2:19364893-19364912 Msa1238710:intron 35.0%
GTGTTTATCTTCTTCCTGTT+GGG + chr8_2:19364894-19364913 Msa1238710:intron 35.0%
GAAGAAAAGTGAATGCCAAA+TGG - chr8_2:19364976-19364995 None:intergenic 35.0%
!! TGGCATTCACTTTTCTTCTT+TGG + chr8_2:19364978-19364997 Msa1238710:intron 35.0%
!! GGCATTCACTTTTCTTCTTT+GGG + chr8_2:19364979-19364998 Msa1238710:intron 35.0%
! ACTCTCTCTACTCTTTTATC+GGG + chr8_2:19365158-19365177 Msa1238710:intron 35.0%
CGGGCAAAATCCATATTATA+TGG + chr8_2:19365177-19365196 Msa1238710:intron 35.0%
GAAATGGGTCCCATATAATA+TGG - chr8_2:19365190-19365209 None:intergenic 35.0%
!!! TTTCTTTTTTGTCTTGGGAC+AGG + chr8_2:19365365-19365384 Msa1238710:intron 35.0%
!! TGGTTTAATTTTGACCAAGC+TGG + chr8_2:19365401-19365420 Msa1238710:CDS 35.0%
!! TTAATTTTGACCAAGCTGGA+TGG + chr8_2:19365405-19365424 Msa1238710:CDS 35.0%
GGAATCCCTGTAAAATTTGT+TGG + chr8_2:19365603-19365622 Msa1238710:CDS 35.0%
! CCAACACCAACAAATTTTAC+AGG - chr8_2:19365612-19365631 None:intergenic 35.0%
!! CCTGTAAAATTTGTTGGTGT+TGG + chr8_2:19365609-19365628 Msa1238710:CDS 35.0%
!! AAATTTGTTGGTGTTGGTGA+AGG + chr8_2:19365615-19365634 Msa1238710:CDS 35.0%
!! CAGAAAAATGGCATTGACAA+AGG - chr8_2:19365673-19365692 None:intergenic 35.0%
ATTGAATAGTGAAGGGTGAT+AGG - chr8_2:19365797-19365816 None:intergenic 35.0%
GTGTAAATTCCGAAAGAGTA+TGG - chr8_2:19365846-19365865 None:intergenic 35.0%
CCTAGAGTTAAGTATGATTG+GGG - chr8_2:19365868-19365887 None:intergenic 35.0%
CCCTAGAGTTAAGTATGATT+GGG - chr8_2:19365869-19365888 None:intergenic 35.0%
CCCAATCATACTTAACTCTA+GGG + chr8_2:19365866-19365885 Msa1238710:intron 35.0%
CCAATCATACTTAACTCTAG+GGG + chr8_2:19365867-19365886 Msa1238710:intron 35.0%
! ACACACTCATCCTTTAAGAA+AGG + chr8_2:19366145-19366164 Msa1238710:intron 35.0%
TCATTGAAATTGTAAGGGGT+TGG + chr8_2:19366227-19366246 Msa1238710:intron 35.0%
AGACCAAATTGACTGACATT+GGG - chr8_2:19366291-19366310 None:intergenic 35.0%
AAGACCAAATTGACTGACAT+TGG - chr8_2:19366292-19366311 None:intergenic 35.0%
GATTGACACTTACAATTTCG+AGG + chr8_2:19366512-19366531 Msa1238710:intron 35.0%
TGAATGCATACTGTCTACTA+TGG + chr8_2:19366618-19366637 Msa1238710:intron 35.0%
GAATGCATACTGTCTACTAT+GGG + chr8_2:19366619-19366638 Msa1238710:intron 35.0%
! AAAGTGAACAATTTTAGGCG+AGG + chr8_2:19366649-19366668 Msa1238710:intron 35.0%
ACCTTTGACGTTCTTAAACT+TGG + chr8_2:19366709-19366728 Msa1238710:intron 35.0%
ACCAAGTTTAAGAACGTCAA+AGG - chr8_2:19366713-19366732 None:intergenic 35.0%
ACAAAACTTTACCTCTCTCT+AGG - chr8_2:19366777-19366796 None:intergenic 35.0%
!!! GAGAGAGGTAAAGTTTTGTT+AGG + chr8_2:19366778-19366797 Msa1238710:intron 35.0%
!! GTTTTGTTAGGAGTTGTTCA+TGG + chr8_2:19366790-19366809 Msa1238710:intron 35.0%
ACGAGATCAATTTAAGAGGA+CGG - chr8_2:19366920-19366939 None:intergenic 35.0%
CTCCTAACACCAAAATAATG+AGG + chr8_2:19366962-19366981 Msa1238710:intron 35.0%
! AATCAAGGTTAAGGTACTTC+TGG - chr8_2:19367082-19367101 None:intergenic 35.0%
CGAAGGAAAAATCAAGGTTA+AGG - chr8_2:19367091-19367110 None:intergenic 35.0%
! ATTTTTCCTTCGTTGCACAT+TGG + chr8_2:19367099-19367118 Msa1238710:intron 35.0%
TTCGGACAATACTACAATGA+TGG + chr8_2:19367365-19367384 Msa1238710:three_prime_UTR 35.0%
TCGGACAATACTACAATGAT+GGG + chr8_2:19367366-19367385 Msa1238710:three_prime_UTR 35.0%
GAACATGAAGAGTGAACATA+TGG + chr8_2:19367461-19367480 Msa1238710:three_prime_UTR 35.0%
CTCATTGAGAAGTTGAAGAA+AGG - chr8_2:19367530-19367549 None:intergenic 35.0%
CTTTCTTCAACTTCTCAATG+AGG + chr8_2:19367528-19367547 Msa1238710:three_prime_UTR 35.0%
ACGAATGTTTCACGAATCTT+AGG + chr8_2:19367687-19367706 Msa1238710:three_prime_UTR 35.0%
AATGTTTCACGAATCTTAGG+TGG + chr8_2:19367690-19367709 Msa1238710:three_prime_UTR 35.0%
!!! CGTATTTTTTGGTCAGGAAA+GGG - chr8_2:19367727-19367746 None:intergenic 35.0%
!!! TCGTATTTTTTGGTCAGGAA+AGG - chr8_2:19367728-19367747 None:intergenic 35.0%
TTCCTGACCAAAAAATACGA+CGG + chr8_2:19367728-19367747 Msa1238710:three_prime_UTR 35.0%
!!! GAATTGTGGTTTTGGAGGAA+TGG - chr8_2:19359025-19359044 None:intergenic 40.0%
!!! ATGAGGAATTGTGGTTTTGG+AGG - chr8_2:19359030-19359049 None:intergenic 40.0%
TGTGAATAGACCAGTTTCAC+CGG - chr8_2:19359115-19359134 None:intergenic 40.0%
! GGAGAGATTGTTACGAGTTT+TGG - chr8_2:19359202-19359221 None:intergenic 40.0%
AGTTCTTGATGAACTCGAAG+AGG + chr8_2:19359269-19359288 Msa1238710:CDS 40.0%
! CTTTCTGGGAAGCTTAAATC+AGG + chr8_2:19359455-19359474 Msa1238710:CDS 40.0%
GATGGCATCTTAGAGTGATT+TGG + chr8_2:19359628-19359647 Msa1238710:intron 40.0%
!! GCATCTTAGAGTGATTTGGT+TGG + chr8_2:19359632-19359651 Msa1238710:intron 40.0%
TTGAACACACCAGAAGAATG+TGG + chr8_2:19360057-19360076 Msa1238710:intron 40.0%
ACAATGCAACCACATTCTTC+TGG - chr8_2:19360069-19360088 None:intergenic 40.0%
!! TGGCTTTATACTGAGATGAG+AGG + chr8_2:19360105-19360124 Msa1238710:intron 40.0%
! GGCTTTATACTGAGATGAGA+GGG + chr8_2:19360106-19360125 Msa1238710:intron 40.0%
! TTTTTGAACCGAGAAGGCTT+TGG + chr8_2:19360200-19360219 Msa1238710:intron 40.0%
! TGTTTGGTATTGCTCTGGAT+AGG - chr8_2:19360262-19360281 None:intergenic 40.0%
CATCAAGCTAAATGGGAGAA+TGG - chr8_2:19360375-19360394 None:intergenic 40.0%
!! CATTCTCCCATTTAGCTTGA+TGG + chr8_2:19360373-19360392 Msa1238710:intron 40.0%
ATGGAGCCATCAAGCTAAAT+GGG - chr8_2:19360382-19360401 None:intergenic 40.0%
TATGGAGCCATCAAGCTAAA+TGG - chr8_2:19360383-19360402 None:intergenic 40.0%
! ACTGTCATTTCGAAGTGGAA+GGG - chr8_2:19360576-19360595 None:intergenic 40.0%
ATCTCAATCAGGGAACATGT+TGG - chr8_2:19360740-19360759 None:intergenic 40.0%
GAAGGTGACTAATCTCAATC+AGG - chr8_2:19360751-19360770 None:intergenic 40.0%
CTTGTTCATACTCGGATTCA+CGG - chr8_2:19360868-19360887 None:intergenic 40.0%
TCGGTATCCTTGTTCATACT+CGG - chr8_2:19360876-19360895 None:intergenic 40.0%
GACTACTAATCCAAACTCCT+TGG - chr8_2:19361032-19361051 None:intergenic 40.0%
GAAAGATGCTCTTACGTGAA+AGG + chr8_2:19361082-19361101 Msa1238710:intron 40.0%
! TCCTTTGATGGTAGTACTGT+GGG - chr8_2:19361166-19361185 None:intergenic 40.0%
ACAGTACTACCATCAAAGGA+GGG + chr8_2:19361166-19361185 Msa1238710:intron 40.0%
CCAACTATCATTATTACGGC+TGG - chr8_2:19361634-19361653 None:intergenic 40.0%
CCAGCCGTAATAATGATAGT+TGG + chr8_2:19361631-19361650 Msa1238710:CDS 40.0%
!! ATAGTTGGTGTTAATGGTGG+CGG + chr8_2:19361646-19361665 Msa1238710:CDS 40.0%
!! TGTTAATTGCTTTGGAGGAC+AGG - chr8_2:19361877-19361896 None:intergenic 40.0%
!! ATTGAAGAATGGAGGTGCTA+AGG + chr8_2:19361960-19361979 Msa1238710:CDS 40.0%
GAATCCAATCAAAATGGGAG+AGG + chr8_2:19362530-19362549 Msa1238710:intron 40.0%
!! TCTTCCTCTCCCATTTTGAT+TGG - chr8_2:19362537-19362556 None:intergenic 40.0%
GTTTGAAAATTCGAGCCATG+CGG - chr8_2:19362764-19362783 None:intergenic 40.0%
TCATATCTTGCAAACAGGGA+TGG + chr8_2:19362836-19362855 Msa1238710:intron 40.0%
! AGCTAGAAATATGGGCTGAA+AGG + chr8_2:19363245-19363264 Msa1238710:CDS 40.0%
! AAATATGGGCTGAAAGGACT+GGG + chr8_2:19363251-19363270 Msa1238710:CDS 40.0%
ATTTGTACCTGCTGATGCTT+TGG - chr8_2:19363308-19363327 None:intergenic 40.0%
AAAGTGATAAACGGCAAGCT+AGG - chr8_2:19363347-19363366 None:intergenic 40.0%
CAGGTTTACACACCAATTAC+AGG + chr8_2:19363624-19363643 Msa1238710:intron 40.0%
ACACACCAATTACAGGCTAA+TGG + chr8_2:19363631-19363650 Msa1238710:CDS 40.0%
! CTCTTCCATTAGCCTGTAAT+TGG - chr8_2:19363639-19363658 None:intergenic 40.0%
! GGCTAAGTTGAGAGGAAAAA+GGG - chr8_2:19363727-19363746 None:intergenic 40.0%
! TGGCTAAGTTGAGAGGAAAA+AGG - chr8_2:19363728-19363747 None:intergenic 40.0%
! AGAAAGATGGCTAAGTTGAG+AGG - chr8_2:19363735-19363754 None:intergenic 40.0%
! AATATAAGAGAGCACAAGCG+AGG - chr8_2:19364025-19364044 None:intergenic 40.0%
TTGGTTAGCACCTTCAGAAT+TGG + chr8_2:19364092-19364111 Msa1238710:intron 40.0%
TGGTTAGCACCTTCAGAATT+GGG + chr8_2:19364093-19364112 Msa1238710:intron 40.0%
TTCCCTACTTGTAGTGTATG+AGG + chr8_2:19364357-19364376 Msa1238710:intron 40.0%
CTCCTCATACACTACAAGTA+GGG - chr8_2:19364362-19364381 None:intergenic 40.0%
TCTCCTCATACACTACAAGT+AGG - chr8_2:19364363-19364382 None:intergenic 40.0%
GTCATTTGTTTCATTCCCCT+TGG + chr8_2:19364462-19364481 Msa1238710:intron 40.0%
TCAAGAACCAAGATGTCCAA+GGG - chr8_2:19364481-19364500 None:intergenic 40.0%
! TCATTGAATTCTCTGGCTTG+TGG - chr8_2:19364844-19364863 None:intergenic 40.0%
!! TTCTTCTTTGGGATGAGTGT+TGG + chr8_2:19364990-19365009 Msa1238710:intron 40.0%
!! TATTTCAGTAGAGGAGTGCT+AGG + chr8_2:19365118-19365137 Msa1238710:intron 40.0%
AGATGCTAATTACTGTTGGC+AGG + chr8_2:19365560-19365579 Msa1238710:intron 40.0%
GATAGGAAAGATCGTATGAC+TGG - chr8_2:19365780-19365799 None:intergenic 40.0%
CCCCAATCATACTTAACTCT+AGG + chr8_2:19365865-19365884 Msa1238710:intron 40.0%
CCCCTAGAGTTAAGTATGAT+TGG - chr8_2:19365870-19365889 None:intergenic 40.0%
CTAGGCATGTGTGTTCTATT+TGG + chr8_2:19365941-19365960 Msa1238710:intron 40.0%
!! GAACCTTTCCACTTTTGACT+TGG + chr8_2:19365992-19366011 Msa1238710:intron 40.0%
CATCCAAGTCAAAAGTGGAA+AGG - chr8_2:19365998-19366017 None:intergenic 40.0%
! TGTGAGCTAAGTTTAGAGTG+AGG + chr8_2:19366016-19366035 Msa1238710:intron 40.0%
! GTGAGCTAAGTTTAGAGTGA+GGG + chr8_2:19366017-19366036 Msa1238710:intron 40.0%
AGTCCCAATGTCAGTCAATT+TGG + chr8_2:19366285-19366304 Msa1238710:intron 40.0%
GTGCAACGAAGGAAAAATCA+AGG - chr8_2:19367097-19367116 None:intergenic 40.0%
ATATAGCCAATGTGCAACGA+AGG - chr8_2:19367108-19367127 None:intergenic 40.0%
GAAGCTTGTCCTCTCAATTA+TGG - chr8_2:19367249-19367268 None:intergenic 40.0%
CGAAGCTATTCTTGCTTTGA+AGG + chr8_2:19367297-19367316 Msa1238710:three_prime_UTR 40.0%
CGGACAATACTACAATGATG+GGG + chr8_2:19367367-19367386 Msa1238710:three_prime_UTR 40.0%
ATGGGGTTTATTTCCACTCT+TGG + chr8_2:19367384-19367403 Msa1238710:three_prime_UTR 40.0%
! TTCAAGTTCAATGCCAAGAG+TGG - chr8_2:19367400-19367419 None:intergenic 40.0%
!!! AACCGTCGTATTTTTTGGTC+AGG - chr8_2:19367733-19367752 None:intergenic 40.0%
!!! CCACTAACCGTCGTATTTTT+TGG - chr8_2:19367738-19367757 None:intergenic 40.0%
CCAAAAAATACGACGGTTAG+TGG + chr8_2:19367735-19367754 Msa1238710:three_prime_UTR 40.0%
TTGTAGCCATTTCTGCAGTG+TGG - chr8_2:19358975-19358994 None:intergenic 45.0%
GAGGTGAAGATGAGGAATTG+TGG - chr8_2:19359039-19359058 None:intergenic 45.0%
!! AGGGGGGTTTGGTTTGAAAT+GGG - chr8_2:19359062-19359081 None:intergenic 45.0%
GTCTATTCACAAAACTCGGC+CGG + chr8_2:19359124-19359143 Msa1238710:CDS 45.0%
CGGCCGGTTACTAAAAGAAA+AGG + chr8_2:19359140-19359159 Msa1238710:CDS 45.0%
ATTGCAACCAGTCATGTGTG+TGG + chr8_2:19359790-19359809 Msa1238710:intron 45.0%
AAGTTCACCACACACATGAC+TGG - chr8_2:19359800-19359819 None:intergenic 45.0%
CTTCAACACCAAAGCCTTCT+CGG - chr8_2:19360211-19360230 None:intergenic 45.0%
TGCAAGCATCACTAACTGCT+AGG + chr8_2:19360469-19360488 Msa1238710:intron 45.0%
! CACTGTCATTTCGAAGTGGA+AGG - chr8_2:19360577-19360596 None:intergenic 45.0%
CGTGAATCCGAGTATGAACA+AGG + chr8_2:19360866-19360885 Msa1238710:intron 45.0%
TCTCATGTTGTGGATCAGCT+TGG - chr8_2:19361056-19361075 None:intergenic 45.0%
TATTGACGGAGATCGAACCA+GGG - chr8_2:19361109-19361128 None:intergenic 45.0%
CTCCGTCAATACAATCCTTG+TGG + chr8_2:19361118-19361137 Msa1238710:intron 45.0%
CGCCACAAGGATTGTATTGA+CGG - chr8_2:19361123-19361142 None:intergenic 45.0%
TCAATACAATCCTTGTGGCG+AGG + chr8_2:19361123-19361142 Msa1238710:intron 45.0%
! CTTTGATGGTAGTACTGTGG+GGG - chr8_2:19361164-19361183 None:intergenic 45.0%
! CCTTTGATGGTAGTACTGTG+GGG - chr8_2:19361165-19361184 None:intergenic 45.0%
! CTCCTTTGATGGTAGTACTG+TGG - chr8_2:19361167-19361186 None:intergenic 45.0%
CACAGTACTACCATCAAAGG+AGG + chr8_2:19361165-19361184 Msa1238710:intron 45.0%
CAGTACTACCATCAAAGGAG+GGG + chr8_2:19361167-19361186 Msa1238710:intron 45.0%
!! TAGTTGGTGTTAATGGTGGC+GGG + chr8_2:19361647-19361666 Msa1238710:CDS 45.0%
TCTTTCCAGGTACGTAAGGA+GGG - chr8_2:19361766-19361785 None:intergenic 45.0%
ATCTTTCCAGGTACGTAAGG+AGG - chr8_2:19361767-19361786 None:intergenic 45.0%
TATAAGCCAGCTTTCCTGCA+AGG - chr8_2:19361939-19361958 None:intergenic 45.0%
! CAGCCTTTAGAAAGCTGAGT+AGG - chr8_2:19362116-19362135 None:intergenic 45.0%
CTGACCATTAATCAGGCCTT+AGG + chr8_2:19362178-19362197 Msa1238710:intron 45.0%
TCACTGCTCCAGGTAGAAAT+GGG - chr8_2:19362267-19362286 None:intergenic 45.0%
AGCATTCCCTGCCTCATTAT+TGG + chr8_2:19362363-19362382 Msa1238710:intron 45.0%
TGAGTATAGTGCAGCTTCCA+AGG - chr8_2:19362483-19362502 None:intergenic 45.0%
AAAATTCGAGCCATGCGGAA+GGG - chr8_2:19362759-19362778 None:intergenic 45.0%
TACCAGATATTGTTGGCAGC+TGG + chr8_2:19363193-19363212 Msa1238710:intron 45.0%
! GAAATATGGGCTGAAAGGAC+TGG + chr8_2:19363250-19363269 Msa1238710:CDS 45.0%
! GAGAAATCCAAAGCATCAGC+AGG + chr8_2:19363298-19363317 Msa1238710:CDS 45.0%
GCTGTTGCTAAAGTAGTTGC+TGG + chr8_2:19363677-19363696 Msa1238710:CDS 45.0%
!! GGGTCAAAAGCGCTTACATT+GGG - chr8_2:19363707-19363726 None:intergenic 45.0%
!! AGGGTCAAAAGCGCTTACAT+TGG - chr8_2:19363708-19363727 None:intergenic 45.0%
AGCAAGCAATGCTATTGCTC+AGG - chr8_2:19364312-19364331 None:intergenic 45.0%
TTCATTCCCCTTGGACATCT+TGG + chr8_2:19364471-19364490 Msa1238710:intron 45.0%
CAAGAACCAAGATGTCCAAG+GGG - chr8_2:19364480-19364499 None:intergenic 45.0%
GTCAAGAACCAAGATGTCCA+AGG - chr8_2:19364482-19364501 None:intergenic 45.0%
! GGACATCTTGGTTCTTGACA+TGG + chr8_2:19364483-19364502 Msa1238710:intron 45.0%
ACAAGCCTACTTACGGAATG+TGG - chr8_2:19364648-19364667 None:intergenic 45.0%
!! AACGGTGTTACAATGCTTGC+AGG + chr8_2:19364774-19364793 Msa1238710:intron 45.0%
ATGCTTGCAGGAGATCTTAC+TGG + chr8_2:19364786-19364805 Msa1238710:intron 45.0%
!! GAGATCTTACTGGTTCTGGA+TGG + chr8_2:19364796-19364815 Msa1238710:CDS 45.0%
GGGTCTTACACGTTGGAAAT+GGG - chr8_2:19365205-19365224 None:intergenic 45.0%
TGGGTCTTACACGTTGGAAA+TGG - chr8_2:19365206-19365225 None:intergenic 45.0%
TCAATGTGGGTCTTACACGT+TGG - chr8_2:19365212-19365231 None:intergenic 45.0%
! TTTTGTCTTGGGACAGGTTG+TGG + chr8_2:19365371-19365390 Msa1238710:intron 45.0%
TTTGTCTTGGGACAGGTTGT+GGG + chr8_2:19365372-19365391 Msa1238710:intron 45.0%
GCTCACATCCAAGTCAAAAG+TGG - chr8_2:19366003-19366022 None:intergenic 45.0%
TAGAGTGAGGGCTATGTCTT+TGG + chr8_2:19366029-19366048 Msa1238710:intron 45.0%
TTCTGAATCGTAGCATAGCC+TGG - chr8_2:19367159-19367178 None:intergenic 45.0%
CGAATATGCTGAGCAACACT+AGG + chr8_2:19367192-19367211 Msa1238710:three_prime_UTR 45.0%
TAACCCCTTTGCATGCTTTG+TGG + chr8_2:19367334-19367353 Msa1238710:three_prime_UTR 45.0%
CAACCACAAAGCATGCAAAG+GGG - chr8_2:19367340-19367359 None:intergenic 45.0%
CCAACCACAAAGCATGCAAA+GGG - chr8_2:19367341-19367360 None:intergenic 45.0%
TGCTTTGTGGTTGGCAGTTT+CGG + chr8_2:19367347-19367366 Msa1238710:three_prime_UTR 45.0%
GCACTGCCCTTATCAGTATA+AGG - chr8_2:19367644-19367663 None:intergenic 45.0%
! GGTCAGGAAAGGGTTTTTGT+AGG - chr8_2:19367717-19367736 None:intergenic 45.0%
!! ATTAAAATCTTTAATTAAAT+AGG - chr8_2:19359704-19359723 None:intergenic 5.0%
!! GTATTTATTATTTAAATAAA+AGG - chr8_2:19360839-19360858 None:intergenic 5.0%
!! TTAAAAAAAAAAATATATGT+TGG - chr8_2:19361280-19361299 None:intergenic 5.0%
GCTCAACCACACTGCAGAAA+TGG + chr8_2:19358966-19358985 Msa1238710:exon 50.0%
!!! GTTTTGGAGGAATGGAGAGG+CGG - chr8_2:19359017-19359036 None:intergenic 50.0%
!!! GTGGTTTTGGAGGAATGGAG+AGG - chr8_2:19359020-19359039 None:intergenic 50.0%
GAAATGGGGAGGTGAAGATG+AGG - chr8_2:19359047-19359066 None:intergenic 50.0%
!! GGGTTTGGTTTGAAATGGGG+AGG - chr8_2:19359058-19359077 None:intergenic 50.0%
!! GGGGGGTTTGGTTTGAAATG+GGG - chr8_2:19359061-19359080 None:intergenic 50.0%
!! GAGGGGGGTTTGGTTTGAAA+TGG - chr8_2:19359063-19359082 None:intergenic 50.0%
! TGAAACGGGTTCGAGATGAG+GGG - chr8_2:19359080-19359099 None:intergenic 50.0%
! GTGAAACGGGTTCGAGATGA+GGG - chr8_2:19359081-19359100 None:intergenic 50.0%
! TGTGAAACGGGTTCGAGATG+AGG - chr8_2:19359082-19359101 None:intergenic 50.0%
GAATAGACCAGTTTCACCGG+CGG - chr8_2:19359112-19359131 None:intergenic 50.0%
CGAAGTGGAAGGGTCTTGAA+AGG - chr8_2:19360566-19360585 None:intergenic 50.0%
! GCTGAAGCATCCGAGAAAAG+TGG + chr8_2:19360646-19360665 Msa1238710:intron 50.0%
AGGGAACATGTTGGCACACA+AGG - chr8_2:19360731-19360750 None:intergenic 50.0%
! GTATTGACGGAGATCGAACC+AGG - chr8_2:19361110-19361129 None:intergenic 50.0%
TCCTTGTGGCGAGGCTAAAT+TGG + chr8_2:19361132-19361151 Msa1238710:intron 50.0%
ACCAATTTAGCCTCGCCACA+AGG - chr8_2:19361136-19361155 None:intergenic 50.0%
CCCCACAGTACTACCATCAA+AGG + chr8_2:19361162-19361181 Msa1238710:intron 50.0%
TCTTCAGTCCCCTCCTTTGA+TGG - chr8_2:19361178-19361197 None:intergenic 50.0%
TGGCGGGAAGACAACATCTT+TGG + chr8_2:19361663-19361682 Msa1238710:CDS 50.0%
GGCGGGAAGACAACATCTTT+GGG + chr8_2:19361664-19361683 Msa1238710:CDS 50.0%
TGATTCCCTCCTTACGTACC+TGG + chr8_2:19361758-19361777 Msa1238710:intron 50.0%
! GCTTTTCCTTGCAGGAAAGC+TGG + chr8_2:19361930-19361949 Msa1238710:intron 50.0%
CTCACTGCTCCAGGTAGAAA+TGG - chr8_2:19362268-19362287 None:intergenic 50.0%
CAAAAGTTGCTCACTGCTCC+AGG - chr8_2:19362277-19362296 None:intergenic 50.0%
! CTGGAGCAGTGAGCAACTTT+TGG + chr8_2:19362275-19362294 Msa1238710:intron 50.0%
CAGTGTTATCCCAGCAAACG+AGG - chr8_2:19362668-19362687 None:intergenic 50.0%
CGGAAGGGCTAGACTAATGA+AGG - chr8_2:19362744-19362763 None:intergenic 50.0%
! ATTAGTCTAGCCCTTCCGCA+TGG + chr8_2:19362746-19362765 Msa1238710:intron 50.0%
GAAAATTCGAGCCATGCGGA+AGG - chr8_2:19362760-19362779 None:intergenic 50.0%
CACCAGCTGCCAACAATATC+TGG - chr8_2:19363198-19363217 None:intergenic 50.0%
GACTGGGTGTGAGATTGTTG+TGG + chr8_2:19363267-19363286 Msa1238710:CDS 50.0%
!! ACAGCTTGTGAAAGCACTGC+AGG - chr8_2:19363465-19363484 None:intergenic 50.0%
GCGAGGTGTACCAGTATAAG+TGG - chr8_2:19364008-19364027 None:intergenic 50.0%
ATGCTATTGCTCAGGTCACG+TGG - chr8_2:19364304-19364323 None:intergenic 50.0%
!! GCAGGAGATCTTACTGGTTC+TGG + chr8_2:19364792-19364811 Msa1238710:intron 50.0%
!! CTGGTTCTGGATGGAACTAC+TGG + chr8_2:19364805-19364824 Msa1238710:CDS 50.0%
TCTTGCAGAACCATCCAGCT+TGG - chr8_2:19365418-19365437 None:intergenic 50.0%
! AAGCTGGATGGTTCTGCAAG+AGG + chr8_2:19365417-19365436 Msa1238710:CDS 50.0%
TTACTGTTGGCAGGTCAGTG+TGG + chr8_2:19365569-19365588 Msa1238710:intron 50.0%
!! GTCAGTGTGGTTGATGAGCT+GGG + chr8_2:19365582-19365601 Msa1238710:CDS 50.0%
ACAAAGGCCTCTGCATCGAA+GGG - chr8_2:19365657-19365676 None:intergenic 50.0%
GAGAGGACAAGCTTCGCAAA+AGG + chr8_2:19367254-19367273 Msa1238710:three_prime_UTR 50.0%
!! TGCTTTGAAGGAAGCTCAGC+TGG + chr8_2:19367309-19367328 Msa1238710:three_prime_UTR 50.0%
CCCTTTGCATGCTTTGTGGT+TGG + chr8_2:19367338-19367357 Msa1238710:three_prime_UTR 50.0%
GCCAACCACAAAGCATGCAA+AGG - chr8_2:19367342-19367361 None:intergenic 50.0%
CTCGGGACAACTTTCGAACA+AGG + chr8_2:19367576-19367595 Msa1238710:three_prime_UTR 50.0%
GAGGCGGTTGAATGAAGCAG+AGG - chr8_2:19359001-19359020 None:intergenic 55.0%
! AAACGGGTTCGAGATGAGGG+GGG - chr8_2:19359078-19359097 None:intergenic 55.0%
! GAAACGGGTTCGAGATGAGG+GGG - chr8_2:19359079-19359098 None:intergenic 55.0%
GCTCTTACGTGAAAGGTCCC+TGG + chr8_2:19361089-19361108 Msa1238710:intron 55.0%
GTTATCCCAGCAAACGAGGC+AGG - chr8_2:19362664-19362683 None:intergenic 55.0%
GGACAGGTTGTGGGTGTAAC+TGG + chr8_2:19365381-19365400 Msa1238710:intron 55.0%
! CTGGATGGTTCTGCAAGAGG+TGG + chr8_2:19365420-19365439 Msa1238710:CDS 55.0%
TTCTGCAAGAGGTGGCTGTG+TGG + chr8_2:19365428-19365447 Msa1238710:CDS 55.0%
!! GGTCAGTGTGGTTGATGAGC+TGG + chr8_2:19365581-19365600 Msa1238710:intron 55.0%
CCTCTGCATCGAAGGGTTGA+AGG - chr8_2:19365650-19365669 None:intergenic 55.0%
CCTTCAACCCTTCGATGCAG+AGG + chr8_2:19365647-19365666 Msa1238710:CDS 55.0%
GACAAAGGCCTCTGCATCGA+AGG - chr8_2:19365658-19365677 None:intergenic 55.0%
GGTTCGAGATGAGGGGGGTT+TGG - chr8_2:19359073-19359092 None:intergenic 60.0%
TAGACCAGTTTCACCGGCGG+CGG - chr8_2:19359109-19359128 None:intergenic 60.0%
AGCAAACGAGGCAGGCTACG+TGG - chr8_2:19362656-19362675 None:intergenic 60.0%
ACGTAGCCTGCCTCGTTTGC+TGG + chr8_2:19362655-19362674 Msa1238710:intron 60.0%
CGTAGCCTGCCTCGTTTGCT+GGG + chr8_2:19362656-19362675 Msa1238710:intron 60.0%
GGCGGCGGAGCATGTGAAAC+GGG - chr8_2:19359094-19359113 None:intergenic 65.0%
CGGCGGCGGAGCATGTGAAA+CGG - chr8_2:19359095-19359114 None:intergenic 65.0%
CGTTTCACATGCTCCGCCGC+CGG + chr8_2:19359093-19359112 Msa1238710:CDS 65.0%
TGCTCCGCCGCCGGTGAAAC+TGG + chr8_2:19359102-19359121 Msa1238710:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 19358922 19367782 19358922 ID=Msa1238710;Name=Msa1238710
chr8_2 mRNA 19358922 19367782 19358922 ID=Msa1238710-mRNA-1;Parent=Msa1238710;Name=Msa1238710-mRNA-1;_AED=0.11;_eAED=0.11;_QI=63|1|1|1|0.83|0.76|13|582|366
chr8_2 exon 19358922 19359290 19358922 ID=Msa1238710-mRNA-1:exon:7149;Parent=Msa1238710-mRNA-1
chr8_2 exon 19359386 19359490 19359386 ID=Msa1238710-mRNA-1:exon:7150;Parent=Msa1238710-mRNA-1
chr8_2 exon 19361450 19361523 19361450 ID=Msa1238710-mRNA-1:exon:7151;Parent=Msa1238710-mRNA-1
chr8_2 exon 19361627 19361685 19361627 ID=Msa1238710-mRNA-1:exon:7152;Parent=Msa1238710-mRNA-1
chr8_2 exon 19361944 19361981 19361944 ID=Msa1238710-mRNA-1:exon:7153;Parent=Msa1238710-mRNA-1
chr8_2 exon 19363199 19363319 19363199 ID=Msa1238710-mRNA-1:exon:7154;Parent=Msa1238710-mRNA-1
chr8_2 exon 19363469 19363537 19363469 ID=Msa1238710-mRNA-1:exon:7155;Parent=Msa1238710-mRNA-1
chr8_2 exon 19363627 19363709 19363627 ID=Msa1238710-mRNA-1:exon:7156;Parent=Msa1238710-mRNA-1
chr8_2 exon 19364796 19364864 19364796 ID=Msa1238710-mRNA-1:exon:7157;Parent=Msa1238710-mRNA-1
chr8_2 exon 19365387 19365449 19365387 ID=Msa1238710-mRNA-1:exon:7158;Parent=Msa1238710-mRNA-1
chr8_2 exon 19365582 19365712 19365582 ID=Msa1238710-mRNA-1:exon:7159;Parent=Msa1238710-mRNA-1
chr8_2 exon 19367160 19367597 19367160 ID=Msa1238710-mRNA-1:exon:7160;Parent=Msa1238710-mRNA-1
chr8_2 exon 19367656 19367782 19367656 ID=Msa1238710-mRNA-1:exon:7161;Parent=Msa1238710-mRNA-1
chr8_2 five_prime_UTR 19358922 19358984 19358922 ID=Msa1238710-mRNA-1:five_prime_utr;Parent=Msa1238710-mRNA-1
chr8_2 CDS 19358985 19359290 19358985 ID=Msa1238710-mRNA-1:cds;Parent=Msa1238710-mRNA-1
chr8_2 CDS 19359386 19359490 19359386 ID=Msa1238710-mRNA-1:cds;Parent=Msa1238710-mRNA-1
chr8_2 CDS 19361450 19361523 19361450 ID=Msa1238710-mRNA-1:cds;Parent=Msa1238710-mRNA-1
chr8_2 CDS 19361627 19361685 19361627 ID=Msa1238710-mRNA-1:cds;Parent=Msa1238710-mRNA-1
chr8_2 CDS 19361944 19361981 19361944 ID=Msa1238710-mRNA-1:cds;Parent=Msa1238710-mRNA-1
chr8_2 CDS 19363199 19363319 19363199 ID=Msa1238710-mRNA-1:cds;Parent=Msa1238710-mRNA-1
chr8_2 CDS 19363469 19363537 19363469 ID=Msa1238710-mRNA-1:cds;Parent=Msa1238710-mRNA-1
chr8_2 CDS 19363627 19363709 19363627 ID=Msa1238710-mRNA-1:cds;Parent=Msa1238710-mRNA-1
chr8_2 CDS 19364796 19364864 19364796 ID=Msa1238710-mRNA-1:cds;Parent=Msa1238710-mRNA-1
chr8_2 CDS 19365387 19365449 19365387 ID=Msa1238710-mRNA-1:cds;Parent=Msa1238710-mRNA-1
chr8_2 CDS 19365582 19365695 19365582 ID=Msa1238710-mRNA-1:cds;Parent=Msa1238710-mRNA-1
chr8_2 three_prime_UTR 19365696 19365712 19365696 ID=Msa1238710-mRNA-1:three_prime_utr;Parent=Msa1238710-mRNA-1
chr8_2 three_prime_UTR 19367160 19367597 19367160 ID=Msa1238710-mRNA-1:three_prime_utr;Parent=Msa1238710-mRNA-1
chr8_2 three_prime_UTR 19367656 19367782 19367656 ID=Msa1238710-mRNA-1:three_prime_utr;Parent=Msa1238710-mRNA-1
Gene Sequence

>Msa1238710

ATGGCTACAACTGCCTCTGCTTCATTCAACCGCCTCTCCATTCCTCCAAAACCACAATTCCTCATCTTCACCTCCCCATTTCAAACCAAACCCCCCTCATCTCGAACCCGTTTCACATGCTCCGCCGCCGGTGAAACTGGTCTATTCACAAAACTCGGCCGGTTACTAAAAGAAAAGGCAAAAAGCGATGTAGAAAAACTCTTCTCTGGTTTCTCCAAAACTCGTAACAATCTCTCCGTCATTGATGAGCTTCTTCTTTATTGGAATCTCTCTGATACTGATAGAGTTCTTGATGAACTCGAAGAGGCTTTATTAGTTTCTGATTTTGGACCGAAAATTACTATTAAGATTGTAGAGAATTTAAGGGAGGATATACTTTCTGGGAAGCTTAAATCAGGGAGTGAGATTAAGGAAGCACTGAAGAAGAATGTTTTGGATTTGTTAAGCAACAAGGGGAGTAAAACTGAACTTCAACTTGGATATAGGAAACCAGCCGTAATAATGATAGTTGGTGTTAATGGTGGCGGGAAGACAACATCTTTGGGAAAGCTGGCTTATAGATTGAAGAATGGAGGTGCTAAGATATTGTTGGCAGCTGGTGATACATTCAGAGCAGCCGCTAGTGATCAGCTAGAAATATGGGCTGAAAGGACTGGGTGTGAGATTGTTGTGGCTGAATCTGAGAAATCCAAAGCATCAGCAGTGCTTTCACAAGCTGTAAAAAGAGGAAAAGAGCTAGGTTATGATATTGTATTATGTGATACATCTGGACGTTTACACACCAATTACAGGCTAATGGAAGAGTTAATTTCTTGTAAAAAGGCTGTTGCTAAAGTAGTTGCTGGTGCACCCAATGAGATCTTACTGGTTCTGGATGGAACTACTGGTTTGAATATGTTGCCACAAGCCAGAGAATTCAATGAAGTTGTGGGTGTAACTGGTTTAATTTTGACCAAGCTGGATGGTTCTGCAAGAGGTGGCTGTGTGGTCAGTGTGGTTGATGAGCTGGGAATCCCTGTAAAATTTGTTGGTGTTGGTGAAGGTGTTGAAGACCTTCAACCCTTCGATGCAGAGGCCTTTGTCAATGCCATTTTTCTGTAA

Protein sequence

>Msa1238710

MATTASASFNRLSIPPKPQFLIFTSPFQTKPPSSRTRFTCSAAGETGLFTKLGRLLKEKAKSDVEKLFSGFSKTRNNLSVIDELLLYWNLSDTDRVLDELEEALLVSDFGPKITIKIVENLREDILSGKLKSGSEIKEALKKNVLDLLSNKGSKTELQLGYRKPAVIMIVGVNGGGKTTSLGKLAYRLKNGGAKILLAAGDTFRAAASDQLEIWAERTGCEIVVAESEKSKASAVLSQAVKRGKELGYDIVLCDTSGRLHTNYRLMEELISCKKAVAKVVAGAPNEILLVLDGTTGLNMLPQAREFNEVVGVTGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAIFL*