AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0867340

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0867340 MtrunA17_Chr6g0484411 94.634 764 35 4 20 783 29 786 0.0 1443
Msa0867340 MtrunA17_Chr8g0391141 60.935 535 169 4 208 738 105 603 0.0 650
Msa0867340 MtrunA17_Chr1g0187011 45.596 579 301 6 191 757 193 769 4.07e-164 499
Msa0867340 MtrunA17_Chr4g0071101 47.986 571 269 6 204 757 170 729 2.26e-159 484
Msa0867340 MtrunA17_Chr6g0451621 42.461 577 289 8 201 757 143 696 1.31e-140 444
Msa0867340 MtrunA17_Chr2g0330811 40.554 614 323 6 169 757 140 736 8.76e-134 417
Msa0867340 MtrunA17_Chr8g0366041 38.667 225 112 3 221 429 2 216 1.70e-41 151
Msa0867340 MtrunA17_Chr4g0067911 37.853 177 86 7 591 757 167 329 1.57e-22 100
Msa0867340 MtrunA17_Chr4g0033621 36.601 153 94 1 610 762 165 314 3.15e-20 94.4
Msa0867340 MtrunA17_Chr8g0391361 36.242 149 87 3 580 726 9 151 1.02e-18 84.3
Msa0867340 MtrunA17_Chr1g0171521 38.514 148 85 3 580 725 121 264 3.23e-18 85.9
Msa0867340 MtrunA17_Chr6g0449261 33.962 212 124 6 554 753 77 284 2.19e-16 83.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0867340 AT3G18390.1 59.120 773 258 10 31 757 32 792 0.0 870
Msa0867340 AT4G14510.1 39.832 713 342 14 99 757 125 804 2.01e-150 466
Msa0867340 AT3G01370.1 38.329 754 401 13 65 783 23 747 1.27e-148 464
Msa0867340 AT4G29750.1 42.738 599 315 9 171 754 198 783 1.47e-148 459
Msa0867340 AT4G29750.2 42.738 599 315 9 171 754 198 783 1.82e-148 458
Msa0867340 AT3G23070.1 42.289 603 318 7 170 757 190 777 8.20e-144 448
Msa0867340 AT5G16180.1 38.312 770 345 16 26 757 35 712 1.22e-134 419
Msa0867340 AT5G16180.2 35.607 601 258 14 26 589 35 543 5.97e-85 282
Msa0867340 AT2G28480.1 33.166 199 129 2 564 762 111 305 2.11e-20 94.7
Msa0867340 AT4G13070.1 36.207 174 90 6 580 746 145 304 5.13e-20 93.2
Msa0867340 AT3G25440.2 32.812 192 117 4 590 773 79 266 2.06e-19 91.7
Msa0867340 AT3G25440.1 32.812 192 117 4 590 773 143 330 2.55e-19 92.4
Msa0867340 AT3G25440.4 34.356 163 101 3 613 773 17 175 8.40e-19 88.2
Msa0867340 AT3G25440.3 34.356 163 101 3 613 773 17 175 8.40e-19 88.2
Msa0867340 AT3G25440.5 34.356 163 101 3 613 773 17 175 8.40e-19 88.2
Msa0867340 AT3G27550.2 30.942 223 132 7 554 763 73 286 6.36e-16 82.4
Msa0867340 AT3G27550.3 30.942 223 132 7 554 763 17 230 1.25e-15 81.3
Msa0867340 AT3G27550.1 30.942 223 132 7 554 763 17 230 1.25e-15 81.3

Find 253 sgRNAs with CRISPR-Local

Find 531 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGAATTGTTGAAGATAAAA+TGG 0.175515 6_1:+73641 Msa0867340:CDS
AACCATGGATGATTCTATTT+TGG 0.184470 6_1:-77274 None:intergenic
TTGAAGAAAGTTGCAGAATT+TGG 0.185103 6_1:-73120 None:intergenic
CTACTGTAAACAAGCCTCTT+AGG 0.206775 6_1:-79595 None:intergenic
TTTGACAAGCTTAACATTCT+TGG 0.217554 6_1:-77058 None:intergenic
TTCTTGTTTCATTTGTTCTA+TGG 0.226531 6_1:-77886 None:intergenic
TTGTTTCCAATTCTGTAATA+TGG 0.240309 6_1:-77863 None:intergenic
GCCTTTGTTAGAAGGTTTCT+AGG 0.255818 6_1:-77702 None:intergenic
AACAGGTGTGGCTGCAGTTT+TGG 0.268681 6_1:+76834 Msa0867340:CDS
GTAATAGGCTGTACTCATTT+AGG 0.272574 6_1:+80488 Msa0867340:three_prime_UTR
TTAGTTTATTGTTAGTGTTC+TGG 0.273787 6_1:-76571 None:intergenic
AGCCATGGGCGATACGTATC+AGG 0.274363 6_1:-79513 None:intergenic
CGTATCGCCCATGGCTGTTT+TGG 0.274653 6_1:+79520 Msa0867340:CDS
CTTCATCTGTGATTGTTTCC+TGG 0.275888 6_1:-77317 None:intergenic
AATGCGCTGCTTGATGATTT+AGG 0.275993 6_1:+76188 Msa0867340:CDS
CCTTTACATCGAGTTCCTTC+GGG 0.284225 6_1:-76016 None:intergenic
CTTGTACCCCGCGACTTGTT+TGG 0.287876 6_1:+80540 Msa0867340:three_prime_UTR
CTCATTTAGGTAGTTCAAAA+TGG 0.301632 6_1:+80501 Msa0867340:three_prime_UTR
GGAAGATGAAGAAGAGAAAA+TGG 0.303918 6_1:+73690 Msa0867340:CDS
CAAAAGGTTGCAACAGTTAA+GGG 0.308542 6_1:+80143 Msa0867340:three_prime_UTR
TCCTTTACATCGAGTTCCTT+CGG 0.308718 6_1:-76017 None:intergenic
TCATGAGAGCTGGAGGAAAA+AGG 0.313386 6_1:+73939 Msa0867340:CDS
TGGCCGTTTGAGAGAGGTTA+TGG 0.313623 6_1:+80611 Msa0867340:three_prime_UTR
TAGTGGTGGTGGTGGAATTA+AGG 0.319313 6_1:+73759 Msa0867340:CDS
CTGGTTACAAAACACCTTAT+AGG 0.323685 6_1:+76282 Msa0867340:CDS
TCTTAGTGGTGAAGAAAATA+TGG 0.324172 6_1:+80249 Msa0867340:three_prime_UTR
ATGCCTTTGCCTTTGTTAGA+AGG 0.328786 6_1:-77710 None:intergenic
TCTTGTGTCAATCCAGCTTT+AGG 0.331482 6_1:-73901 None:intergenic
TTCTGTGATTCCGATGCTTT+AGG 0.333777 6_1:+80182 Msa0867340:three_prime_UTR
CATGTGCTATTCTTAAGCTT+TGG 0.334419 6_1:+76507 Msa0867340:CDS
ATGTGCTATTCTTAAGCTTT+GGG 0.337709 6_1:+76508 Msa0867340:CDS
TTAAATTTGTACATTCTTAG+TGG 0.340637 6_1:+80235 Msa0867340:three_prime_UTR
GTTATGGTGCAGACATTAAC+AGG 0.341222 6_1:+76748 Msa0867340:intron
CGAAGACACAGCTAGGTTAC+TGG 0.342545 6_1:+77575 Msa0867340:CDS
AATATGGAGTTTGATTTATT+CGG 0.347176 6_1:+80265 Msa0867340:three_prime_UTR
TCAAAAGGTTGCAACAGTTA+AGG 0.351670 6_1:+80142 Msa0867340:three_prime_UTR
CTATGAGGCCCAAGCTCGTT+GGG 0.353341 6_1:+76981 Msa0867340:CDS
GTTTAAGAAGAGGACATTAA+AGG 0.355622 6_1:+73789 Msa0867340:CDS
TTACTTCCCCGTGAAGTTCC+TGG 0.365954 6_1:+76263 Msa0867340:CDS
ATTGTTAGTGTTCTGGATAC+CGG 0.367898 6_1:-76564 None:intergenic
CTCTCTTCCTCTCTCTTCCA+TGG 0.372454 6_1:-73718 None:intergenic
AACTTATACAAGCATGTATA+TGG 0.373730 6_1:+80743 Msa0867340:three_prime_UTR
CACAACAGTAAGGCCATGTT+TGG 0.374297 6_1:-80805 None:intergenic
ATTGTTTCCTGGTCATAATC+AGG 0.375567 6_1:-77306 None:intergenic
AGGAGATTCAGCGACCCTTT+TGG 0.378882 6_1:-73434 None:intergenic
GATTTAGGTCCTCGATTTGA+TGG 0.382666 6_1:+76203 Msa0867340:CDS
CCTTCATTCTTAAACCAATC+TGG 0.383986 6_1:-77356 None:intergenic
TTGAGTGCATTGAAAGTTAC+TGG 0.384358 6_1:+73604 Msa0867340:CDS
AATTTGGAGAAGGGAACAAT+TGG 0.388992 6_1:-73104 None:intergenic
AAGCTTAACATTCTTGGCTT+TGG 0.389419 6_1:-77052 None:intergenic
TTACTAATTTAACAAGTTCT+CGG 0.390308 6_1:-77527 None:intergenic
GCCATTACCTGCAGCTAGAT+TGG 0.392816 6_1:+80075 Msa0867340:three_prime_UTR
AAATATGTCAACTAGCCTTC+AGG 0.397225 6_1:-80027 None:intergenic
AAGCTATCATGGCGAGCTTA+CGG 0.403566 6_1:-80676 None:intergenic
GGAAGAGAAAATGTTGGATA+AGG 0.404215 6_1:-73064 None:intergenic
GAATTGTTACAAGTGGTGTT+TGG 0.405556 6_1:-73220 None:intergenic
CTTCATGCTCCAGTCATCTT+CGG 0.407149 6_1:-78176 None:intergenic
TGTCCCTTCCCCAACGAGCT+TGG 0.409814 6_1:-76990 None:intergenic
TGAAAAGGGTCATCTTTGAT+AGG 0.410040 6_1:-73454 None:intergenic
AAAATCCATCTTCTCCCAAA+AGG 0.411545 6_1:+73419 Msa0867340:CDS
ATAAACACTTATATACTGTT+TGG 0.411950 6_1:+80591 Msa0867340:three_prime_UTR
AGTAGCTTGATTTCACTAGA+AGG 0.413090 6_1:+79613 Msa0867340:CDS
GTCCCTTCCCCAACGAGCTT+GGG 0.418594 6_1:-76989 None:intergenic
GAGTAACCATATTACAGAAT+TGG 0.420282 6_1:+77857 Msa0867340:CDS
AATTGTTACAAGTGGTGTTT+GGG 0.423944 6_1:-73219 None:intergenic
TTCGTTCCGGATGTCTCATC+GGG 0.425528 6_1:+76053 Msa0867340:CDS
TGCTCTATGCAATTTGTTCG+CGG 0.426028 6_1:-77238 None:intergenic
ACAAGCGGCCACTTACTCTA+AGG 0.428042 6_1:+77679 Msa0867340:CDS
AGCTATCATGGCGAGCTTAC+GGG 0.428202 6_1:-80675 None:intergenic
TCGAAAATAGTGAGCTAGTT+GGG 0.433230 6_1:+76117 Msa0867340:CDS
TGTAGTGTGCAGCGCCGAAC+AGG 0.433452 6_1:+75921 Msa0867340:intron
CCTGTAGGAAGAAGCCTATA+AGG 0.435717 6_1:-76296 None:intergenic
TTTGTGAGCCATGGTGGTGT+TGG 0.436694 6_1:-73397 None:intergenic
GGGAAGGACTTTGTTCCAAC+AGG 0.437012 6_1:+76817 Msa0867340:CDS
CCTTATAGGCTTCTTCCTAC+AGG 0.440890 6_1:+76296 Msa0867340:CDS
TTTCGTTCCGGATGTCTCAT+CGG 0.442215 6_1:+76052 Msa0867340:CDS
GGCCGTTTGAGAGAGGTTAT+GGG 0.443099 6_1:+80612 Msa0867340:three_prime_UTR
ATAGCTTATATGAAAACAAT+TGG 0.443491 6_1:+80692 Msa0867340:three_prime_UTR
TGGATTGACACAAGAGGTTA+TGG 0.444880 6_1:+73909 Msa0867340:CDS
TTGTGAGCCATGGTGGTGTT+GGG 0.444942 6_1:-73396 None:intergenic
GAACACTAACAATAAACTAA+TGG 0.445235 6_1:+76574 Msa0867340:CDS
TACTGTAAACAAGCCTCTTA+GGG 0.445791 6_1:-79594 None:intergenic
AGGGTATGCATTTGAGAGAG+AGG 0.448054 6_1:+73869 Msa0867340:CDS
TGAATTGTTGAAGATAAAAT+GGG 0.448571 6_1:+73642 Msa0867340:CDS
GAACAGGAGGGTTGGTTACA+TGG 0.450146 6_1:+75937 Msa0867340:CDS
CGAGTGGTGTTCCGCCAGAT+TGG 0.452047 6_1:+77342 Msa0867340:CDS
TTTGAGGATGTGGTTGAAAA+GGG 0.452955 6_1:-73468 None:intergenic
AATAAGCTGAAAACAAGTTA+AGG 0.455401 6_1:-80652 None:intergenic
TGGTCATAATCAGGACCAAC+TGG 0.455808 6_1:-77297 None:intergenic
TTGAGGAGGTTGAGAAGAGA+GGG 0.456918 6_1:+73850 Msa0867340:CDS
GTAAATTACCTTATTGCCCC+TGG 0.457263 6_1:+80312 Msa0867340:three_prime_UTR
CAGGAGGTACCTTGCTGCTA+AGG 0.459510 6_1:+76767 Msa0867340:CDS
CCAGATTGGTTTAAGAATGA+AGG 0.461011 6_1:+77356 Msa0867340:CDS
ATTTGGAGAAGGGAACAATT+GGG 0.461715 6_1:-73103 None:intergenic
TGGAGAAGATTCATGAGAGC+TGG 0.462471 6_1:+73929 Msa0867340:CDS
TTGAGAACATGCATTTGCAT+TGG 0.463281 6_1:+77499 Msa0867340:CDS
AGTAGTGAGAGAAGGAAATG+AGG 0.464685 6_1:-73335 None:intergenic
TCATATTGGGATACGTATCA+TGG 0.468368 6_1:+79545 Msa0867340:CDS
ATTATGAGAGAGAGTGAATG+AGG 0.470968 6_1:-73284 None:intergenic
AGGAAGAGGGGTTTAAGAAG+AGG 0.471444 6_1:+73779 Msa0867340:CDS
TCGAGTTCCTTCGGGGAAGC+AGG 0.473250 6_1:-76008 None:intergenic
GTTGAGGAGGTTGAGAAGAG+AGG 0.477194 6_1:+73849 Msa0867340:CDS
TTTGATGGATGGTGGGGTAC+AGG 0.477362 6_1:+76218 Msa0867340:CDS
GTGCCGAGATGACCGATTTG+AGG 0.480059 6_1:+76339 Msa0867340:CDS
GTAGTGAGAGAAGGAAATGA+GGG 0.482735 6_1:-73334 None:intergenic
TCCTCATCCAATAAAACATC+CGG 0.483570 6_1:-73670 None:intergenic
GGAAGTAAATCAGCATCAAC+AGG 0.483745 6_1:-76248 None:intergenic
ACCAATCTAGCTGCAGGTAA+TGG 0.484416 6_1:-80076 None:intergenic
GAATAGCACATGCTAGGCCT+TGG 0.484451 6_1:-76496 None:intergenic
GTCCTCCTCGTCATCCCAAT+CGG 0.487861 6_1:-79971 None:intergenic
TATTTCATTGTTATATATCG+TGG 0.488320 6_1:+76796 Msa0867340:CDS
GAAGATAAAATGGGATCGTC+CGG 0.489396 6_1:+73651 Msa0867340:CDS
TAGGTCCTCGATTTGATGGA+TGG 0.490903 6_1:+76207 Msa0867340:CDS
TAGGTAGTTCAAAATGGTAA+AGG 0.490974 6_1:+80507 Msa0867340:three_prime_UTR
ACGCTTATTCTGTAAGTGCT+TGG 0.492542 6_1:+80769 Msa0867340:three_prime_UTR
TCCTCGATTTGATGGATGGT+GGG 0.493475 6_1:+76211 Msa0867340:CDS
AGCCATGGTGGTGTTGGGTT+AGG 0.497797 6_1:-73391 None:intergenic
GGGTATGCATTTGAGAGAGA+GGG 0.499106 6_1:+73870 Msa0867340:CDS
AGGGTTAATGTACCTAAAGC+TGG 0.499720 6_1:+73889 Msa0867340:CDS
TTTCTAGGCCTTAGAGTAAG+TGG 0.500851 6_1:-77687 None:intergenic
TTGGGTTAGGAGAAGACTGA+TGG 0.501913 6_1:-73378 None:intergenic
GAATTGAGGAGTATTGATAG+TGG 0.503961 6_1:+73742 Msa0867340:CDS
TTTGCTATTATTTACTATCG+TGG 0.505691 6_1:+77648 Msa0867340:CDS
GCAGTCATCATGAAACTTCA+AGG 0.508425 6_1:-80051 None:intergenic
GGGTTGGTTACATGGAGAGC+AGG 0.509038 6_1:+75945 Msa0867340:CDS
GAGAGGAAGAGAGAGAATTG+AGG 0.509480 6_1:+73728 Msa0867340:CDS
AAGAGCTTGCTAAGAATATG+AGG 0.510686 6_1:+73986 Msa0867340:CDS
AAAGTTGCAGAATTTGGAGA+AGG 0.510789 6_1:-73114 None:intergenic
ATCAGGACCAACTGGAACCA+TGG 0.513703 6_1:-77289 None:intergenic
GTTGATACCAATCTAGCTGC+AGG 0.514881 6_1:-80082 None:intergenic
TTGTTAGTGTTCTGGATACC+GGG 0.517192 6_1:-76563 None:intergenic
TTTGGAGAAGGGAACAATTG+GGG 0.518055 6_1:-73102 None:intergenic
AAGAGAAAATGGTGGTTCCA+TGG 0.518411 6_1:+73701 Msa0867340:CDS
AAATCCATCTTCTCCCAAAA+GGG 0.519744 6_1:+73420 Msa0867340:CDS
GAGAGAGTGATGAGTGAGAA+TGG 0.520787 6_1:-73256 None:intergenic
GGAATTGACAAAACAAGTAC+AGG 0.520843 6_1:+76867 Msa0867340:CDS
AGGCCCAAGCTCGTTGGGGA+AGG 0.521156 6_1:+76986 Msa0867340:CDS
CTCGAAAATAGTGAGCTAGT+TGG 0.521407 6_1:+76116 Msa0867340:CDS
AGGGTCTATCCGAAGATGAC+TGG 0.524748 6_1:+78167 Msa0867340:intron
TCTATGAGGCCCAAGCTCGT+TGG 0.525172 6_1:+76980 Msa0867340:CDS
TTTGTAACCAGGAACTTCAC+GGG 0.525703 6_1:-76270 None:intergenic
TTCCCATAACCTCTCTCAAA+CGG 0.527865 6_1:-80614 None:intergenic
ATTTCATTCTGTATACATGT+TGG 0.528310 6_1:+79726 Msa0867340:CDS
ATGTAACCAACCCTCCTGTT+CGG 0.528670 6_1:-75935 None:intergenic
TCATGGGATACTAATTGCAC+TGG 0.529311 6_1:+79562 Msa0867340:CDS
GATGACTGGAGCATGAAGGA+AGG 0.531279 6_1:+78181 Msa0867340:CDS
CCCGAAGGAACTCGATGTAA+AGG 0.532159 6_1:+76016 Msa0867340:CDS
GATGCTTTAGGATAATCAAA+AGG 0.532749 6_1:+80194 Msa0867340:three_prime_UTR
GGTGAAGCAACAGCACCGGC+TGG 0.538189 6_1:+76943 Msa0867340:CDS
TTTCCTCAAATCGGTCATCT+CGG 0.538634 6_1:-76342 None:intergenic
AGTCAATCCAAACAAGTCGC+GGG 0.540394 6_1:-80547 None:intergenic
GGTGGTGGAATTAAGGAAGA+GGG 0.541721 6_1:+73766 Msa0867340:CDS
ATGATGAGGAAGAGACCGAT+TGG 0.541906 6_1:+79956 Msa0867340:CDS
ATTCTGAGGTGTGATCTAGT+TGG 0.543991 6_1:-78213 None:intergenic
GTCCTCGATTTGATGGATGG+TGG 0.546656 6_1:+76210 Msa0867340:CDS
AAATTTCCCGATGAGACATC+CGG 0.546790 6_1:-76059 None:intergenic
AGTATTGATAGTGGTGGTGG+TGG 0.547315 6_1:+73751 Msa0867340:CDS
ATCTTTAGCTGAGTTCTATG+AGG 0.547865 6_1:+76966 Msa0867340:CDS
GAAGAGAAAGTAGTGAGAGA+AGG 0.548013 6_1:-73343 None:intergenic
CATTGTTATATATCGTGGGA+AGG 0.548061 6_1:+76801 Msa0867340:CDS
GGCCCAAGCTCGTTGGGGAA+GGG 0.548840 6_1:+76987 Msa0867340:CDS
CTTTAGGATAATCAAAAGGC+AGG 0.550141 6_1:+80198 Msa0867340:three_prime_UTR
TGGTGGTGGAATTAAGGAAG+AGG 0.550266 6_1:+73765 Msa0867340:CDS
GACATAACATCACAACAGTA+AGG 0.552386 6_1:-80815 None:intergenic
AAAACTGCAGCCACACCTGT+TGG 0.553284 6_1:-76832 None:intergenic
AGGAGTATTGATAGTGGTGG+TGG 0.553803 6_1:+73748 Msa0867340:CDS
CTTATAGGCTTCTTCCTACA+GGG 0.557667 6_1:+76297 Msa0867340:CDS
CTGGAACAAATATCCCTAAG+AGG 0.560763 6_1:+79581 Msa0867340:CDS
TGAAGTGGAAGAGAAAATGT+TGG 0.563354 6_1:-73070 None:intergenic
ATTTCATTGTTATATATCGT+GGG 0.571100 6_1:+76797 Msa0867340:CDS
ATGAAGGCATACTTACAACT+TGG 0.573632 6_1:+77372 Msa0867340:CDS
GCTTAAGAATAGCACATGCT+AGG 0.575164 6_1:-76502 None:intergenic
AGTGTCAATTCAGCTAAAGA+TGG 0.577349 6_1:-73814 None:intergenic
GCCTGAGAAAATGACAGAAG+AGG 0.577742 6_1:+76154 Msa0867340:CDS
CGAAGATGACTGGAGCATGA+AGG 0.578024 6_1:+78177 Msa0867340:CDS
AGGAACCTCATGGCGTAGCA+TGG 0.580345 6_1:-77748 None:intergenic
TTTAGCTGAATTGACACTTG+AGG 0.580547 6_1:+73819 Msa0867340:CDS
ATCAAAAGGCAGGCATACAA+TGG 0.581460 6_1:+80208 Msa0867340:three_prime_UTR
CATATTGGGATACGTATCAT+GGG 0.584058 6_1:+79546 Msa0867340:CDS
CACTTGAGGATGAATTGTTG+AGG 0.587332 6_1:+73833 Msa0867340:CDS
AAGTCAATCCAAACAAGTCG+CGG 0.590919 6_1:-80548 None:intergenic
AGTGTGCAGCGCCGAACAGG+AGG 0.594399 6_1:+75924 Msa0867340:intron
AGTACAGGATGTTGAAGAGA+AGG 0.601070 6_1:+76882 Msa0867340:CDS
ACTGTTTGGCCGTTTGAGAG+AGG 0.602121 6_1:+80605 Msa0867340:three_prime_UTR
TGATGAGGAAGAGACCGATT+GGG 0.602307 6_1:+79957 Msa0867340:CDS
TTAAGTTGTTTATCCAAACA+TGG 0.602442 6_1:+80792 Msa0867340:three_prime_UTR
GCCTAGAAACCTTCTAACAA+AGG 0.602939 6_1:+77701 Msa0867340:CDS
TATGATACCAAAACAGCCAT+GGG 0.603518 6_1:-79527 None:intergenic
AAGTTGCAGAATTTGGAGAA+GGG 0.604683 6_1:-73113 None:intergenic
GTTGCTTCACCTTGTACAGA+CGG 0.605122 6_1:-76931 None:intergenic
AGTCGAGAGCGCATCCCTGT+AGG 0.605541 6_1:-76311 None:intergenic
CCTCGATTTGATGGATGGTG+GGG 0.605967 6_1:+76212 Msa0867340:CDS
TTGGGGATGATGATGTGAAG+TGG 0.606488 6_1:-73085 None:intergenic
AGTTGGTCCTGATTATGACC+AGG 0.606914 6_1:+77299 Msa0867340:CDS
TTACCTAAGGCAAAATGACA+AGG 0.608215 6_1:-76380 None:intergenic
GCCATGGGCGATACGTATCA+GGG 0.609033 6_1:-79512 None:intergenic
GCAGCGCCGAACAGGAGGGT+TGG 0.609425 6_1:+75929 Msa0867340:intron
TGGGTTAGGAGAAGACTGAT+GGG 0.610290 6_1:-73377 None:intergenic
ATGACTGGAGCATGAAGGAA+GGG 0.610304 6_1:+78182 Msa0867340:CDS
ACAAGGTGAAGCAACAGCAC+CGG 0.610406 6_1:+76939 Msa0867340:CDS
ATATGATACCAAAACAGCCA+TGG 0.610600 6_1:-79528 None:intergenic
GAGGATGACGAAGATTCTGA+TGG 0.611452 6_1:+79928 Msa0867340:CDS
GATTGCTCATCAGATTGTTG+AGG 0.613802 6_1:+74008 Msa0867340:CDS
AACTCAGCTAAAGATCCAGC+CGG 0.614166 6_1:-76958 None:intergenic
GGCCAAAATAGAATCATCCA+TGG 0.614524 6_1:+77272 Msa0867340:CDS
GTTGCAACTCCGTCTGTACA+AGG 0.615448 6_1:+76922 Msa0867340:CDS
CTCGATGTAAAGGAAGGTGA+TGG 0.616136 6_1:+76026 Msa0867340:CDS
GTGGTGGAATTAAGGAAGAG+GGG 0.616258 6_1:+73767 Msa0867340:CDS
AAACCTTCTAACAAAGGCAA+AGG 0.618172 6_1:+77707 Msa0867340:CDS
GGACTTTGTTCCAACAGGTG+TGG 0.618264 6_1:+76822 Msa0867340:CDS
AGATGAAGAAGAGAAAATGG+TGG 0.619961 6_1:+73693 Msa0867340:CDS
TCAAGGTCCTGCTTCCCCGA+AGG 0.621520 6_1:+76001 Msa0867340:CDS
GCAAAGATTGCTGTTAAACC+CGG 0.621604 6_1:+76545 Msa0867340:CDS
TCTCACTCGGGTGAATTCTG+AGG 0.622298 6_1:-78227 None:intergenic
GAATCATCCATGGTTCCAGT+TGG 0.624111 6_1:+77282 Msa0867340:CDS
TTGAGGATGAATTGTTGAGG+AGG 0.624387 6_1:+73836 Msa0867340:CDS
TTAAGGGATAAATATCTCCT+CGG 0.624518 6_1:+80159 Msa0867340:three_prime_UTR
TGTAGCCATGCTACGCCATG+AGG 0.625498 6_1:+77743 Msa0867340:CDS
ACCCTGATACGTATCGCCCA+TGG 0.626258 6_1:+79511 Msa0867340:CDS
ATATCTATTCCTTAGCAGCA+AGG 0.627334 6_1:-76776 None:intergenic
AGAAGATTCATGAGAGCTGG+AGG 0.631347 6_1:+73932 Msa0867340:CDS
AAGGAACTCGATGTAAAGGA+AGG 0.632592 6_1:+76020 Msa0867340:CDS
GCATAGAGCAGAAAAGCTGT+TGG 0.634181 6_1:+77251 Msa0867340:CDS
CTCCTAACCCAACACCACCA+TGG 0.637426 6_1:+73389 Msa0867340:CDS
GACCGATTGGGATGACGAGG+AGG 0.642355 6_1:+79969 Msa0867340:CDS
TGATGATGAATTGTTACAAG+TGG 0.646625 6_1:-73227 None:intergenic
CTTTACATCGAGTTCCTTCG+GGG 0.648895 6_1:-76015 None:intergenic
GACGTCGATGAGCATCCTGA+AGG 0.654792 6_1:+80012 Msa0867340:CDS
GTGTGCAGCGCCGAACAGGA+GGG 0.656006 6_1:+75925 Msa0867340:intron
GTCAATCCAAACAAGTCGCG+GGG 0.660933 6_1:-80546 None:intergenic
TGAGAGTGGTGGAATACTCG+TGG 0.662154 6_1:+77602 Msa0867340:CDS
TATGAGGCCCAAGCTCGTTG+GGG 0.663287 6_1:+76982 Msa0867340:CDS
GGTGGTTCCATGGAAGAGAG+AGG 0.664996 6_1:+73711 Msa0867340:CDS
TATCTTCTGAAGAACAAGAG+AGG 0.667701 6_1:+77013 Msa0867340:CDS
TCATTCTTAAACCAATCTGG+CGG 0.669508 6_1:-77353 None:intergenic
TAATCATGTCAACAACAATG+AGG 0.669749 6_1:-80444 None:intergenic
CCCCACCATCCATCAAATCG+AGG 0.674173 6_1:-76212 None:intergenic
AATCACAGATGAAGAACGAG+TGG 0.675351 6_1:+77326 Msa0867340:CDS
AGGTTACTGGAATATGAGAG+TGG 0.675850 6_1:+77588 Msa0867340:CDS
TTGAGGAGTATTGATAGTGG+TGG 0.676065 6_1:+73745 Msa0867340:CDS
AGTGTTATGATCGTGTATCG+TGG 0.678119 6_1:+75969 Msa0867340:CDS
TAAAGCTGGATTGACACAAG+AGG 0.679407 6_1:+73903 Msa0867340:CDS
AGAGACCGATTGGGATGACG+AGG 0.680123 6_1:+79966 Msa0867340:CDS
AGTAAATCAGCATCAACAGG+AGG 0.680215 6_1:-76245 None:intergenic
TTACTGGAATATGAGAGTGG+TGG 0.680241 6_1:+77591 Msa0867340:CDS
AAAACATACACTGAGCTCGT+CGG 0.686366 6_1:-76597 None:intergenic
AGGATGTTGAAGAGAAGGTG+CGG 0.691449 6_1:+76887 Msa0867340:CDS
ATATAATCTTCAGGTATACG+TGG 0.709959 6_1:+77459 Msa0867340:intron
AAAATAGTGAGCTAGTTGGG+AGG 0.710041 6_1:+76120 Msa0867340:CDS
GCATCGGAATCACAGAACCG+AGG 0.724102 6_1:-80176 None:intergenic
TTGTAACCAGGAACTTCACG+GGG 0.728029 6_1:-76269 None:intergenic
GGGAGAAATAGAAATCACCA+AGG 0.742961 6_1:+76479 Msa0867340:intron
ATGGTGCAGACATTAACAGG+AGG 0.752569 6_1:+76751 Msa0867340:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTAAAAAAAAA+AGG - chr6_1:75220-75239 None:intergenic 0.0%
!! TAAATTAAAATAAGTCATTA+TGG - chr6_1:75581-75600 None:intergenic 10.0%
!! AAAAAACATAGTTATTTAAT+TGG - chr6_1:77190-77209 None:intergenic 10.0%
!!! CATTTTTAAAATCAATATTA+AGG + chr6_1:78798-78817 Msa0867340:intron 10.0%
!!! TCTATTACTATTAATATTTT+AGG + chr6_1:79819-79838 Msa0867340:intron 10.0%
!!! CTATTACTATTAATATTTTA+GGG + chr6_1:79820-79839 Msa0867340:intron 10.0%
!!! TCTTTTTCTTAAATTATTAC+TGG + chr6_1:74118-74137 Msa0867340:intron 15.0%
!! ATGATATTATTGAAATAAGT+CGG + chr6_1:74341-74360 Msa0867340:intron 15.0%
!! GAAATAAAGGAATATAAATT+AGG - chr6_1:74564-74583 None:intergenic 15.0%
!! TCAATATAAATATGATATTC+CGG + chr6_1:74809-74828 Msa0867340:intron 15.0%
!! ACAGAAATATAAAAGATAAA+TGG - chr6_1:77799-77818 None:intergenic 15.0%
!!! ATTTGATATTTGAAGTATTT+TGG - chr6_1:79001-79020 None:intergenic 15.0%
!!! AAAAAAGCAGAATTTTTTTT+TGG + chr6_1:79350-79369 Msa0867340:intron 15.0%
!!! TTGGATAAGGTTTTTTTTTT+TGG - chr6_1:73054-73073 None:intergenic 20.0%
!! TGAATTGTTGAAGATAAAAT+GGG + chr6_1:73642-73661 Msa0867340:CDS 20.0%
!! TTAAGAAAAAGAATCAATGT+CGG - chr6_1:74110-74129 None:intergenic 20.0%
!!! TTCCTTTATTTCATTTGATA+AGG + chr6_1:74572-74591 Msa0867340:intron 20.0%
!!! TCCTTTATTTCATTTGATAA+GGG + chr6_1:74573-74592 Msa0867340:intron 20.0%
!!! TCTTTTGTTTCACTAAAATA+TGG + chr6_1:74751-74770 Msa0867340:intron 20.0%
!!! CTTTTGTTTCACTAAAATAT+GGG + chr6_1:74752-74771 Msa0867340:intron 20.0%
!! TAATATAAGTTATAGTTGTG+CGG + chr6_1:74967-74986 Msa0867340:intron 20.0%
!!! TTTTTAAAAAAAAAAGGCAC+CGG - chr6_1:75214-75233 None:intergenic 20.0%
!!! CTTTTTAAAAAGTGTATATG+AGG + chr6_1:75240-75259 Msa0867340:intron 20.0%
!! ATAAGTTATGTAATGAGAAT+TGG + chr6_1:75269-75288 Msa0867340:intron 20.0%
!!! AAACGGGTTTTAAAAATTAT+AGG - chr6_1:75683-75702 None:intergenic 20.0%
!!! AAACATTGTTTGTTTACTTT+TGG + chr6_1:75866-75885 Msa0867340:intron 20.0%
!!! TTTTTTCATGTACTTTATGA+AGG + chr6_1:76458-76477 Msa0867340:intron 20.0%
!!! TTTTTCATGTACTTTATGAA+GGG + chr6_1:76459-76478 Msa0867340:intron 20.0%
!! TATTTCATTGTTATATATCG+TGG + chr6_1:76796-76815 Msa0867340:CDS 20.0%
!! ATTTCATTGTTATATATCGT+GGG + chr6_1:76797-76816 Msa0867340:CDS 20.0%
!! AGATTAAAGAAACTTATGAA+TGG - chr6_1:77412-77431 None:intergenic 20.0%
!!! TCTTTTATGATATAATCTTC+AGG + chr6_1:77450-77469 Msa0867340:intron 20.0%
!! TTACTAATTTAACAAGTTCT+CGG - chr6_1:77530-77549 None:intergenic 20.0%
!! TGAATCATTCAAAACAAATT+TGG - chr6_1:77955-77974 None:intergenic 20.0%
!! AATATATAAATGTCAACAAC+AGG - chr6_1:78019-78038 None:intergenic 20.0%
!! TTATTCTCTTAAAATGATGT+AGG + chr6_1:78147-78166 Msa0867340:intron 20.0%
!! TATTCTCTTAAAATGATGTA+GGG + chr6_1:78148-78167 Msa0867340:intron 20.0%
!! TAATAAAGCAGACAAAAATA+AGG - chr6_1:78267-78286 None:intergenic 20.0%
!! TTACGAGAAAATCATTTAAT+TGG - chr6_1:78315-78334 None:intergenic 20.0%
!! GAAAACTCTTGAATAAAAAA+TGG + chr6_1:79215-79234 Msa0867340:intron 20.0%
!!! CTTTTTTTAAGTATCAGTTA+TGG - chr6_1:79337-79356 None:intergenic 20.0%
!!! ACTATTAATATTTTAGGGTA+TGG + chr6_1:79825-79844 Msa0867340:intron 20.0%
!! TTAAATTTGTACATTCTTAG+TGG + chr6_1:80235-80254 Msa0867340:three_prime_UTR 20.0%
!!! AATATGGAGTTTGATTTATT+CGG + chr6_1:80265-80284 Msa0867340:three_prime_UTR 20.0%
!!! TTTTTGATATAGTAGCTTAT+AGG + chr6_1:80368-80387 Msa0867340:three_prime_UTR 20.0%
!!! AGTTTTCTTCATATTGTAAT+AGG + chr6_1:80473-80492 Msa0867340:three_prime_UTR 20.0%
!! ATAAACACTTATATACTGTT+TGG + chr6_1:80591-80610 Msa0867340:three_prime_UTR 20.0%
!! ATAGCTTATATGAAAACAAT+TGG + chr6_1:80692-80711 Msa0867340:three_prime_UTR 20.0%
!!! ATTTCGATGTTTTTAAGGTT+TGG - chr6_1:73166-73185 None:intergenic 25.0%
!! ATTCTTTCAACAGGATTTTT+CGG - chr6_1:73496-73515 None:intergenic 25.0%
! CTAAAAACAATTCTTTCAAC+AGG - chr6_1:73505-73524 None:intergenic 25.0%
!!! CTGTTGAAAGAATTGTTTTT+AGG + chr6_1:73503-73522 Msa0867340:CDS 25.0%
!!! GTTTTTAGGTTAAGAAACTT+AGG + chr6_1:73517-73536 Msa0867340:CDS 25.0%
! GTGAATTGTTGAAGATAAAA+TGG + chr6_1:73641-73660 Msa0867340:CDS 25.0%
! GAAATGTTACAATGAAGTAA+AGG - chr6_1:74046-74065 None:intergenic 25.0%
! GTGTATTGAAAGACTAATAT+AGG + chr6_1:74404-74423 Msa0867340:intron 25.0%
!!! TATTAATTTGGATCGGTTTT+TGG - chr6_1:74484-74503 None:intergenic 25.0%
!! CCTATGTTATTAATTTGGAT+CGG - chr6_1:74491-74510 None:intergenic 25.0%
! AGCAACCTATGTTATTAATT+TGG - chr6_1:74496-74515 None:intergenic 25.0%
! AATTAGGCAAATAAAAGCAA+AGG - chr6_1:74548-74567 None:intergenic 25.0%
! ACCCTTATCAAATGAAATAA+AGG - chr6_1:74577-74596 None:intergenic 25.0%
! ATATAAATATGATATTCCGG+AGG + chr6_1:74812-74831 Msa0867340:intron 25.0%
! TATAAATATGATATTCCGGA+GGG + chr6_1:74813-74832 Msa0867340:intron 25.0%
! AGCTTAATTTAGTGCTTATT+TGG + chr6_1:74867-74886 Msa0867340:intron 25.0%
! AAATCAGCATAAATGAAACT+AGG - chr6_1:75049-75068 None:intergenic 25.0%
!! TACATGCATGCATATATTTT+AGG - chr6_1:75318-75337 None:intergenic 25.0%
! AAAATATATGCATGCATGTA+CGG + chr6_1:75318-75337 Msa0867340:intron 25.0%
! TATCGTGGTAAAAATTATCA+AGG + chr6_1:75984-76003 Msa0867340:CDS 25.0%
!!! TAGTAAAGTATTGAAGTGAA+TGG - chr6_1:76409-76428 None:intergenic 25.0%
! TTAGTTTATTGTTAGTGTTC+TGG - chr6_1:76574-76593 None:intergenic 25.0%
! GAACACTAACAATAAACTAA+TGG + chr6_1:76574-76593 Msa0867340:CDS 25.0%
!! ATGATATCTCTTTTCTGTTA+TGG + chr6_1:76732-76751 Msa0867340:intron 25.0%
!! ATGTTTTATGAAGATATGCT+TGG + chr6_1:77117-77136 Msa0867340:intron 25.0%
! TAGTTATTTAATTGGCATTC+TGG - chr6_1:77182-77201 None:intergenic 25.0%
!!! TTTGCTATTATTTACTATCG+TGG + chr6_1:77648-77667 Msa0867340:CDS 25.0%
!! TAACTTGTCACATAGAAAAT+AGG - chr6_1:77771-77790 None:intergenic 25.0%
! TTGTTTCCAATTCTGTAATA+TGG - chr6_1:77866-77885 None:intergenic 25.0%
!! TTCTTGTTTCATTTGTTCTA+TGG - chr6_1:77889-77908 None:intergenic 25.0%
! TAAATTTCACATGTTGAAGT+TGG - chr6_1:77922-77941 None:intergenic 25.0%
! AACATGTGAAATTTATCAAG+TGG + chr6_1:77927-77946 Msa0867340:intron 25.0%
! CATATTGTTGACATGTTAAT+AGG - chr6_1:78093-78112 None:intergenic 25.0%
!! TCAACAATATGTTTTCTCTA+AGG + chr6_1:78102-78121 Msa0867340:intron 25.0%
! CAAAAATAAGGAGAGAAAAA+GGG - chr6_1:78255-78274 None:intergenic 25.0%
! ACAAAAATAAGGAGAGAAAA+AGG - chr6_1:78256-78275 None:intergenic 25.0%
!! AATTTTTAAACTTAGCAGAG+AGG - chr6_1:78580-78599 None:intergenic 25.0%
! AAAATCACAAAACAAGAAAG+AGG - chr6_1:78666-78685 None:intergenic 25.0%
!!! ATCTTGAGTGAATTTTAAAG+TGG + chr6_1:78752-78771 Msa0867340:intron 25.0%
!!! ATTTTAAAGTGGATCAGTAA+AGG + chr6_1:78763-78782 Msa0867340:intron 25.0%
! ACAAATCATTGTAGTCAAAT+CGG + chr6_1:78867-78886 Msa0867340:intron 25.0%
!!! GTTTGGTTTTGATTGAATTA+AGG - chr6_1:79083-79102 None:intergenic 25.0%
!!! TTTTTTTTGGAAATTTTGCC+CGG + chr6_1:79363-79382 Msa0867340:intron 25.0%
! ATTTCATTCTGTATACATGT+TGG + chr6_1:79726-79745 Msa0867340:CDS 25.0%
! TAAAAATACAGAAACTAGCA+AGG + chr6_1:79757-79776 Msa0867340:CDS 25.0%
!!! GAAAACTGTTTTGTTCATAT+GGG - chr6_1:79863-79882 None:intergenic 25.0%
!!! TGAAAACTGTTTTGTTCATA+TGG - chr6_1:79864-79883 None:intergenic 25.0%
!!! TTGTTATTATTTTCAGAGTG+AGG + chr6_1:79909-79928 Msa0867340:intron 25.0%
!!! TTTTGATTATCCTAAAGCAT+CGG - chr6_1:80195-80214 None:intergenic 25.0%
! TAATTCAAATGAAAAACCAG+GGG - chr6_1:80331-80350 None:intergenic 25.0%
! GTAATTCAAATGAAAAACCA+GGG - chr6_1:80332-80351 None:intergenic 25.0%
! TGTAATTCAAATGAAAAACC+AGG - chr6_1:80333-80352 None:intergenic 25.0%
! AATAAGCTGAAAACAAGTTA+AGG - chr6_1:80655-80674 None:intergenic 25.0%
!! TGTTTTCATATAAGCTATCA+TGG - chr6_1:80690-80709 None:intergenic 25.0%
! AACTTATACAAGCATGTATA+TGG + chr6_1:80743-80762 Msa0867340:three_prime_UTR 25.0%
!! TTAAGTTGTTTATCCAAACA+TGG + chr6_1:80792-80811 Msa0867340:three_prime_UTR 25.0%
TTGAAGAAAGTTGCAGAATT+TGG - chr6_1:73123-73142 None:intergenic 30.0%
!! GTTGCATTTCGATGTTTTTA+AGG - chr6_1:73171-73190 None:intergenic 30.0%
AATTGTTACAAGTGGTGTTT+GGG - chr6_1:73222-73241 None:intergenic 30.0%
! TGATGATGAATTGTTACAAG+TGG - chr6_1:73230-73249 None:intergenic 30.0%
GTTTAAGAAGAGGACATTAA+AGG + chr6_1:73789-73808 Msa0867340:CDS 30.0%
!! ATTTCAGATTGATAGTGTGT+TGG + chr6_1:74061-74080 Msa0867340:intron 30.0%
! ATTCCTTTATTTCACTTGCA+AGG + chr6_1:74202-74221 Msa0867340:intron 30.0%
! TTCCTTTATTTCACTTGCAA+GGG + chr6_1:74203-74222 Msa0867340:intron 30.0%
! AGTTTAGTTTAGTGCTTGTT+TGG + chr6_1:74318-74337 Msa0867340:intron 30.0%
ATAGGTTGTAACAAGAGATT+AGG + chr6_1:74422-74441 Msa0867340:intron 30.0%
CGTGTCTAAGAAAACTTATT+TGG - chr6_1:74448-74467 None:intergenic 30.0%
! TTTTCTTAGACACGTATATC+TGG + chr6_1:74454-74473 Msa0867340:intron 30.0%
CCGATCCAAATTAATAACAT+AGG + chr6_1:74488-74507 Msa0867340:intron 30.0%
!!! TCATTTGATAAGGGTGTTTT+TGG + chr6_1:74582-74601 Msa0867340:intron 30.0%
AATGAACTGTTAAGAACATG+AGG + chr6_1:74658-74677 Msa0867340:intron 30.0%
GATTGCTTATGAGATTGTTT+AGG + chr6_1:74680-74699 Msa0867340:intron 30.0%
TAAAGCCAGGCAAAATAAAA+CGG - chr6_1:74719-74738 None:intergenic 30.0%
CACTAAAATATGGGTATGTT+TGG + chr6_1:74761-74780 Msa0867340:intron 30.0%
GGATTAATTAAGTGCTTGTA+TGG + chr6_1:74834-74853 Msa0867340:intron 30.0%
!! ATGCTGATTTCTTCAGTAAT+AGG + chr6_1:75059-75078 Msa0867340:intron 30.0%
TGAGGAATCATAACTTATTG+AGG + chr6_1:75108-75127 Msa0867340:intron 30.0%
GAGGAATCATAACTTATTGA+GGG + chr6_1:75109-75128 Msa0867340:intron 30.0%
AGGAATCATAACTTATTGAG+GGG + chr6_1:75110-75129 Msa0867340:intron 30.0%
AGTGTTTGACAGAATTTCTT+TGG - chr6_1:75295-75314 None:intergenic 30.0%
ATACAAGTTATGACATGACA+TGG - chr6_1:75434-75453 None:intergenic 30.0%
! TCATAACTTGTATTTGTGCT+AGG + chr6_1:75441-75460 Msa0867340:intron 30.0%
! CATAACTTGTATTTGTGCTA+GGG + chr6_1:75442-75461 Msa0867340:intron 30.0%
! CTTTGCAATTTTCCTCAAAT+CGG - chr6_1:76354-76373 None:intergenic 30.0%
!! AAGTGAATGGATTTTACCTA+AGG - chr6_1:76396-76415 None:intergenic 30.0%
! ATGTGCTATTCTTAAGCTTT+GGG + chr6_1:76508-76527 Msa0867340:CDS 30.0%
! ATTCTTTTGTTGCCAAGATA+TGG + chr6_1:76669-76688 Msa0867340:intron 30.0%
!! TTCTAGTCTTAACCATATCT+TGG - chr6_1:76684-76703 None:intergenic 30.0%
TTTGACAAGCTTAACATTCT+TGG - chr6_1:77061-77080 None:intergenic 30.0%
TATCACTCTTATGTGTGAAT+AGG + chr6_1:77215-77234 Msa0867340:intron 30.0%
! AACCATGGATGATTCTATTT+TGG - chr6_1:77277-77296 None:intergenic 30.0%
ATATAATCTTCAGGTATACG+TGG + chr6_1:77459-77478 Msa0867340:intron 30.0%
ATCGTGGAAAAAATTACAAG+CGG + chr6_1:77664-77683 Msa0867340:CDS 30.0%
GAGTAACCATATTACAGAAT+TGG + chr6_1:77857-77876 Msa0867340:CDS 30.0%
!! TTTCTCTAAGGTCAGTATAT+CGG + chr6_1:78114-78133 Msa0867340:intron 30.0%
!!! CTATAAACACTTGTTTTGTC+AGG - chr6_1:78394-78413 None:intergenic 30.0%
CTGACAAAACAAGTGTTTAT+AGG + chr6_1:78392-78411 Msa0867340:intron 30.0%
ACAAAACAAGTGTTTATAGG+TGG + chr6_1:78395-78414 Msa0867340:intron 30.0%
AAAACTGGATTGTAAGATGA+GGG - chr6_1:78428-78447 None:intergenic 30.0%
!! ATCTTACAATCCAGTTTTGT+AGG + chr6_1:78430-78449 Msa0867340:intron 30.0%
!! TCTTACAATCCAGTTTTGTA+GGG + chr6_1:78431-78450 Msa0867340:intron 30.0%
TTTAAATATTATCGCACCCA+AGG - chr6_1:78504-78523 None:intergenic 30.0%
AATTTACATCTCTCAAGTGA+TGG - chr6_1:78550-78569 None:intergenic 30.0%
TAGACGATTGTATTTCACTT+CGG + chr6_1:78612-78631 Msa0867340:intron 30.0%
! AATATTAAGGTGTTCAGAGT+TGG + chr6_1:78811-78830 Msa0867340:intron 30.0%
CAAATCATTGTAGTCAAATC+GGG + chr6_1:78868-78887 Msa0867340:intron 30.0%
CACTATACACTCTATATGTT+TGG - chr6_1:79100-79119 None:intergenic 30.0%
ATAGCTCCAAATTAATTGGT+CGG + chr6_1:79184-79203 Msa0867340:intron 30.0%
TTGTAACCGACCAATTAATT+TGG - chr6_1:79193-79212 None:intergenic 30.0%
GTTCATTTGCAATATCTGAT+GGG + chr6_1:79237-79256 Msa0867340:intron 30.0%
! CAAATTTACCCGATTTTCTT+GGG - chr6_1:79277-79296 None:intergenic 30.0%
CAAGAAAATCGGGTAAATTT+GGG + chr6_1:79276-79295 Msa0867340:intron 30.0%
! ACAGCTCATAAGTTTTCAAA+AGG + chr6_1:80127-80146 Msa0867340:three_prime_UTR 30.0%
TTAAGGGATAAATATCTCCT+CGG + chr6_1:80159-80178 Msa0867340:three_prime_UTR 30.0%
!! GATGCTTTAGGATAATCAAA+AGG + chr6_1:80194-80213 Msa0867340:three_prime_UTR 30.0%
TCTTAGTGGTGAAGAAAATA+TGG + chr6_1:80249-80268 Msa0867340:three_prime_UTR 30.0%
TAATCATGTCAACAACAATG+AGG - chr6_1:80447-80466 None:intergenic 30.0%
CTCATTTAGGTAGTTCAAAA+TGG + chr6_1:80501-80520 Msa0867340:three_prime_UTR 30.0%
TAGGTAGTTCAAAATGGTAA+AGG + chr6_1:80507-80526 Msa0867340:three_prime_UTR 30.0%
ACACACCAAAAATGATACAT+GGG - chr6_1:80844-80863 None:intergenic 30.0%
AACACACCAAAAATGATACA+TGG - chr6_1:80845-80864 None:intergenic 30.0%
GGAAGAGAAAATGTTGGATA+AGG - chr6_1:73067-73086 None:intergenic 35.0%
TGAAGTGGAAGAGAAAATGT+TGG - chr6_1:73073-73092 None:intergenic 35.0%
ATTTGGAGAAGGGAACAATT+GGG - chr6_1:73106-73125 None:intergenic 35.0%
AATTTGGAGAAGGGAACAAT+TGG - chr6_1:73107-73126 None:intergenic 35.0%
AAGTTGCAGAATTTGGAGAA+GGG - chr6_1:73116-73135 None:intergenic 35.0%
AAAGTTGCAGAATTTGGAGA+AGG - chr6_1:73117-73136 None:intergenic 35.0%
GAATTGTTACAAGTGGTGTT+TGG - chr6_1:73223-73242 None:intergenic 35.0%
ATTATGAGAGAGAGTGAATG+AGG - chr6_1:73287-73306 None:intergenic 35.0%
!!! GAAGGAAATGAGGGTTTTTT+GGG - chr6_1:73328-73347 None:intergenic 35.0%
!!! AGAAGGAAATGAGGGTTTTT+TGG - chr6_1:73329-73348 None:intergenic 35.0%
AAAATCCATCTTCTCCCAAA+AGG + chr6_1:73419-73438 Msa0867340:CDS 35.0%
AAATCCATCTTCTCCCAAAA+GGG + chr6_1:73420-73439 Msa0867340:CDS 35.0%
TGAAAAGGGTCATCTTTGAT+AGG - chr6_1:73457-73476 None:intergenic 35.0%
TTTGAGGATGTGGTTGAAAA+GGG - chr6_1:73471-73490 None:intergenic 35.0%
!! TTTTGAGGATGTGGTTGAAA+AGG - chr6_1:73472-73491 None:intergenic 35.0%
!! TTTTTCGGTTTTTGAGGATG+TGG - chr6_1:73481-73500 None:intergenic 35.0%
!! ACAGGATTTTTCGGTTTTTG+AGG - chr6_1:73487-73506 None:intergenic 35.0%
TTGAGTGCATTGAAAGTTAC+TGG + chr6_1:73604-73623 Msa0867340:CDS 35.0%
TCCTCATCCAATAAAACATC+CGG - chr6_1:73673-73692 None:intergenic 35.0%
GGAAGATGAAGAAGAGAAAA+TGG + chr6_1:73690-73709 Msa0867340:CDS 35.0%
AGATGAAGAAGAGAAAATGG+TGG + chr6_1:73693-73712 Msa0867340:CDS 35.0%
!! GAATTGAGGAGTATTGATAG+TGG + chr6_1:73742-73761 Msa0867340:CDS 35.0%
AGTGTCAATTCAGCTAAAGA+TGG - chr6_1:73817-73836 None:intergenic 35.0%
TTTAGCTGAATTGACACTTG+AGG + chr6_1:73819-73838 Msa0867340:CDS 35.0%
!! AAGAGCTTGCTAAGAATATG+AGG + chr6_1:73986-74005 Msa0867340:CDS 35.0%
!!! TGGTTTTATGAGACACTTGT+CGG + chr6_1:74081-74100 Msa0867340:intron 35.0%
!! TAAGCTAAGAAGCACTAACA+CGG - chr6_1:74173-74192 None:intergenic 35.0%
AAAGCCAGGCAAAATAAAAC+GGG - chr6_1:74718-74737 None:intergenic 35.0%
AATGTAAAGTGAGTAAAGCC+AGG - chr6_1:74732-74751 None:intergenic 35.0%
AAGCACTTAATTAATCCCTC+CGG - chr6_1:74831-74850 None:intergenic 35.0%
!! GATTCATGGTTTGGTTTGAT+GGG + chr6_1:75015-75034 Msa0867340:intron 35.0%
!! GGTGTTGCTTATGATTGTTT+GGG + chr6_1:75131-75150 Msa0867340:intron 35.0%
TTGCTTATGATTGTTTGGGT+TGG + chr6_1:75135-75154 Msa0867340:intron 35.0%
! TGCTTATGATTGTTTGGGTT+GGG + chr6_1:75136-75155 Msa0867340:intron 35.0%
! GTTGGGGTGTCAATAAAATT+GGG + chr6_1:75153-75172 Msa0867340:intron 35.0%
CATGGCTACTGTTTCAAAAT+GGG - chr6_1:75416-75435 None:intergenic 35.0%
ACATGGCTACTGTTTCAAAA+TGG - chr6_1:75417-75436 None:intergenic 35.0%
AATAGACTGAATGCGAACAT+GGG - chr6_1:75708-75727 None:intergenic 35.0%
AGTGAATGTACTATGCACAA+TGG - chr6_1:75824-75843 None:intergenic 35.0%
! AACTAGCTCACTATTTTCGA+GGG - chr6_1:76117-76136 None:intergenic 35.0%
TCGAAAATAGTGAGCTAGTT+GGG + chr6_1:76117-76136 Msa0867340:CDS 35.0%
! TTTTGTAACCAGGAACTTCA+CGG - chr6_1:76274-76293 None:intergenic 35.0%
!! CTATAAGGTGTTTTGTAACC+AGG - chr6_1:76284-76303 None:intergenic 35.0%
CTGGTTACAAAACACCTTAT+AGG + chr6_1:76282-76301 Msa0867340:CDS 35.0%
TTACCTAAGGCAAAATGACA+AGG - chr6_1:76383-76402 None:intergenic 35.0%
! CATGTGCTATTCTTAAGCTT+TGG + chr6_1:76507-76526 Msa0867340:CDS 35.0%
! ATTGTTAGTGTTCTGGATAC+CGG - chr6_1:76567-76586 None:intergenic 35.0%
ATTTCCTTGTTCATCGTTCT+AGG - chr6_1:76708-76727 None:intergenic 35.0%
ATATCTATTCCTTAGCAGCA+AGG - chr6_1:76779-76798 None:intergenic 35.0%
CATTGTTATATATCGTGGGA+AGG + chr6_1:76801-76820 Msa0867340:CDS 35.0%
GGAATTGACAAAACAAGTAC+AGG + chr6_1:76867-76886 Msa0867340:CDS 35.0%
ATCTTTAGCTGAGTTCTATG+AGG + chr6_1:76966-76985 Msa0867340:CDS 35.0%
! TATCTTCTGAAGAACAAGAG+AGG + chr6_1:77013-77032 Msa0867340:CDS 35.0%
AAGCTTAACATTCTTGGCTT+TGG - chr6_1:77055-77074 None:intergenic 35.0%
ATTGTTTCCTGGTCATAATC+AGG - chr6_1:77309-77328 None:intergenic 35.0%
TCATTCTTAAACCAATCTGG+CGG - chr6_1:77356-77375 None:intergenic 35.0%
CCTTCATTCTTAAACCAATC+TGG - chr6_1:77359-77378 None:intergenic 35.0%
!! CCAGATTGGTTTAAGAATGA+AGG + chr6_1:77356-77375 Msa0867340:CDS 35.0%
! ATGAAGGCATACTTACAACT+TGG + chr6_1:77372-77391 Msa0867340:CDS 35.0%
TTGAGAACATGCATTTGCAT+TGG + chr6_1:77499-77518 Msa0867340:CDS 35.0%
AAACCTTCTAACAAAGGCAA+AGG + chr6_1:77707-77726 Msa0867340:CDS 35.0%
CATAGAAAATAGGAACCTCA+TGG - chr6_1:77761-77780 None:intergenic 35.0%
ACATTCGTAATTCTCTCATC+TGG + chr6_1:77988-78007 Msa0867340:intron 35.0%
! TTGTCTGCTTTATTATGCGA+AGG + chr6_1:78272-78291 Msa0867340:intron 35.0%
GGCTATATCTCATCTAATGT+GGG - chr6_1:78373-78392 None:intergenic 35.0%
AGGCTATATCTCATCTAATG+TGG - chr6_1:78374-78393 None:intergenic 35.0%
CAAAACTGGATTGTAAGATG+AGG - chr6_1:78429-78448 None:intergenic 35.0%
CAAGGTTTCTCTCAGAAATT+AGG - chr6_1:78479-78498 None:intergenic 35.0%
GAAGTGAAATACAATCGTCT+AGG - chr6_1:78613-78632 None:intergenic 35.0%
!! AAGTACTCAAGTTGATAGCA+GGG - chr6_1:78716-78735 None:intergenic 35.0%
!! TAAGTACTCAAGTTGATAGC+AGG - chr6_1:78717-78736 None:intergenic 35.0%
TGCTATCAACTTGAGTACTT+AGG + chr6_1:78716-78735 Msa0867340:intron 35.0%
ACACCAGAAGTTGTAGATAA+AGG + chr6_1:78843-78862 Msa0867340:intron 35.0%
GTTCCTTTATCTACAACTTC+TGG - chr6_1:78849-78868 None:intergenic 35.0%
ATATGTGTTAGAAGCCGTAA+AGG + chr6_1:79136-79155 Msa0867340:intron 35.0%
GGGAATAGCTCCAAATTAAT+TGG + chr6_1:79180-79199 Msa0867340:intron 35.0%
GGTTCATTTGCAATATCTGA+TGG + chr6_1:79236-79255 Msa0867340:intron 35.0%
! CCAAATTTACCCGATTTTCT+TGG - chr6_1:79278-79297 None:intergenic 35.0%
CCAAGAAAATCGGGTAAATT+TGG + chr6_1:79275-79294 Msa0867340:intron 35.0%
TTAAGTATCAGTTATGGAGC+CGG - chr6_1:79331-79350 None:intergenic 35.0%
TGCAAATTTCACAGTATCGT+AGG + chr6_1:79419-79438 Msa0867340:intron 35.0%
CGTAGGATACTAGATTGAAT+CGG + chr6_1:79436-79455 Msa0867340:intron 35.0%
GTAGGATACTAGATTGAATC+GGG + chr6_1:79437-79456 Msa0867340:intron 35.0%
TAGATTGAATCGGGATACAT+GGG + chr6_1:79446-79465 Msa0867340:intron 35.0%
ACATGGGATACAATGTCATT+TGG + chr6_1:79482-79501 Msa0867340:intron 35.0%
! CATGGGATACAATGTCATTT+GGG + chr6_1:79483-79502 Msa0867340:intron 35.0%
TATGATACCAAAACAGCCAT+GGG - chr6_1:79530-79549 None:intergenic 35.0%
ATATGATACCAAAACAGCCA+TGG - chr6_1:79531-79550 None:intergenic 35.0%
!!! TGGCTGTTTTGGTATCATAT+TGG + chr6_1:79531-79550 Msa0867340:CDS 35.0%
!!! GGCTGTTTTGGTATCATATT+GGG + chr6_1:79532-79551 Msa0867340:CDS 35.0%
TCATATTGGGATACGTATCA+TGG + chr6_1:79545-79564 Msa0867340:CDS 35.0%
CATATTGGGATACGTATCAT+GGG + chr6_1:79546-79565 Msa0867340:CDS 35.0%
TACTGTAAACAAGCCTCTTA+GGG - chr6_1:79597-79616 None:intergenic 35.0%
AGTAGCTTGATTTCACTAGA+AGG + chr6_1:79613-79632 Msa0867340:CDS 35.0%
ATACAGAAACTAGCAAGGTA+TGG + chr6_1:79762-79781 Msa0867340:intron 35.0%
AACTAGCAAGGTATGGTATA+AGG + chr6_1:79769-79788 Msa0867340:intron 35.0%
ACTAGCAAGGTATGGTATAA+GGG + chr6_1:79770-79789 Msa0867340:intron 35.0%
!!! TTCTGATGGTTTTGATGATG+AGG + chr6_1:79942-79961 Msa0867340:CDS 35.0%
!! AAATATGTCAACTAGCCTTC+AGG - chr6_1:80030-80049 None:intergenic 35.0%
TCAAAAGGTTGCAACAGTTA+AGG + chr6_1:80142-80161 Msa0867340:three_prime_UTR 35.0%
CAAAAGGTTGCAACAGTTAA+GGG + chr6_1:80143-80162 Msa0867340:three_prime_UTR 35.0%
!! CTTTAGGATAATCAAAAGGC+AGG + chr6_1:80198-80217 Msa0867340:three_prime_UTR 35.0%
!! CTGAATTTTGAGTAGCATGA+TGG + chr6_1:80398-80417 Msa0867340:three_prime_UTR 35.0%
GTAATAGGCTGTACTCATTT+AGG + chr6_1:80488-80507 Msa0867340:three_prime_UTR 35.0%
GACATAACATCACAACAGTA+AGG - chr6_1:80818-80837 None:intergenic 35.0%
! TCTTCCCCATGTATCATTTT+TGG + chr6_1:80836-80855 Msa0867340:three_prime_UTR 35.0%
CACACCAAAAATGATACATG+GGG - chr6_1:80843-80862 None:intergenic 35.0%
TTTGGAGAAGGGAACAATTG+GGG - chr6_1:73105-73124 None:intergenic 40.0%
GTAGTGAGAGAAGGAAATGA+GGG - chr6_1:73337-73356 None:intergenic 40.0%
AGTAGTGAGAGAAGGAAATG+AGG - chr6_1:73338-73357 None:intergenic 40.0%
GAAGAGAAAGTAGTGAGAGA+AGG - chr6_1:73346-73365 None:intergenic 40.0%
!!! GATGGATTTTTTGTGAGCCA+TGG - chr6_1:73409-73428 None:intergenic 40.0%
GAAGATAAAATGGGATCGTC+CGG + chr6_1:73651-73670 Msa0867340:CDS 40.0%
!! TCCGGATGTTTTATTGGATG+AGG + chr6_1:73669-73688 Msa0867340:CDS 40.0%
AAGAGAAAATGGTGGTTCCA+TGG + chr6_1:73701-73720 Msa0867340:CDS 40.0%
!! TTGAGGAGTATTGATAGTGG+TGG + chr6_1:73745-73764 Msa0867340:CDS 40.0%
CACTTGAGGATGAATTGTTG+AGG + chr6_1:73833-73852 Msa0867340:CDS 40.0%
TTGAGGATGAATTGTTGAGG+AGG + chr6_1:73836-73855 Msa0867340:CDS 40.0%
AGGGTTAATGTACCTAAAGC+TGG + chr6_1:73889-73908 Msa0867340:CDS 40.0%
TCTTGTGTCAATCCAGCTTT+AGG - chr6_1:73904-73923 None:intergenic 40.0%
TAAAGCTGGATTGACACAAG+AGG + chr6_1:73903-73922 Msa0867340:CDS 40.0%
TGGATTGACACAAGAGGTTA+TGG + chr6_1:73909-73928 Msa0867340:CDS 40.0%
GATTGCTCATCAGATTGTTG+AGG + chr6_1:74008-74027 Msa0867340:CDS 40.0%
!! ATTACTGGTGTCGACATGTT+AGG + chr6_1:74133-74152 Msa0867340:intron 40.0%
!! TTACTGGTGTCGACATGTTA+GGG + chr6_1:74134-74153 Msa0867340:intron 40.0%
AGTGCTTGTCATGTCTTGTA+TGG + chr6_1:74293-74312 Msa0867340:intron 40.0%
GTGCTTGTCATGTCTTGTAT+GGG + chr6_1:74294-74313 Msa0867340:intron 40.0%
TGCTTGTCATGTCTTGTATG+GGG + chr6_1:74295-74314 Msa0867340:intron 40.0%
!!! TTTGCCCGTTTTATTTTGCC+TGG + chr6_1:74711-74730 Msa0867340:intron 40.0%
TAAGTGCTTGTATGGAGAGA+TGG + chr6_1:74842-74861 Msa0867340:intron 40.0%
! AAGCTTGCTTCTCATGGTAT+TGG + chr6_1:74992-75011 Msa0867340:intron 40.0%
! AGCTTGCTTCTCATGGTATT+GGG + chr6_1:74993-75012 Msa0867340:intron 40.0%
! TCTCATGGTATTGGGATTCA+TGG + chr6_1:75001-75020 Msa0867340:intron 40.0%
! TGGTATTGGGATTCATGGTT+TGG + chr6_1:75006-75025 Msa0867340:intron 40.0%
!! GGATTCATGGTTTGGTTTGA+TGG + chr6_1:75014-75033 Msa0867340:intron 40.0%
AGTAATAGGAATGACATGCC+TGG + chr6_1:75073-75092 Msa0867340:intron 40.0%
!! GGGTGTTGCTTATGATTGTT+TGG + chr6_1:75130-75149 Msa0867340:intron 40.0%
!! GCTTATGATTGTTTGGGTTG+GGG + chr6_1:75137-75156 Msa0867340:intron 40.0%
! GGTTGGGGTGTCAATAAAAT+TGG + chr6_1:75152-75171 Msa0867340:intron 40.0%
AATGCGAACATGGGAAAAAC+GGG - chr6_1:75699-75718 None:intergenic 40.0%
GAATGCGAACATGGGAAAAA+CGG - chr6_1:75700-75719 None:intergenic 40.0%
GAATAGACTGAATGCGAACA+TGG - chr6_1:75709-75728 None:intergenic 40.0%
AGTGTTATGATCGTGTATCG+TGG + chr6_1:75969-75988 Msa0867340:CDS 40.0%
TCCTTTACATCGAGTTCCTT+CGG - chr6_1:76020-76039 None:intergenic 40.0%
AAGGAACTCGATGTAAAGGA+AGG + chr6_1:76020-76039 Msa0867340:CDS 40.0%
!!! AGGTGATGGTTTTTTCGTTC+CGG + chr6_1:76040-76059 Msa0867340:CDS 40.0%
AAATTTCCCGATGAGACATC+CGG - chr6_1:76062-76081 None:intergenic 40.0%
! CAACTAGCTCACTATTTTCG+AGG - chr6_1:76118-76137 None:intergenic 40.0%
CTCGAAAATAGTGAGCTAGT+TGG + chr6_1:76116-76135 Msa0867340:CDS 40.0%
AAAATAGTGAGCTAGTTGGG+AGG + chr6_1:76120-76139 Msa0867340:CDS 40.0%
!!! TCCTCTTCTGTCATTTTCTC+AGG - chr6_1:76158-76177 None:intergenic 40.0%
! AATGCGCTGCTTGATGATTT+AGG + chr6_1:76188-76207 Msa0867340:CDS 40.0%
! GATTTAGGTCCTCGATTTGA+TGG + chr6_1:76203-76222 Msa0867340:CDS 40.0%
AGTAAATCAGCATCAACAGG+AGG - chr6_1:76248-76267 None:intergenic 40.0%
GGAAGTAAATCAGCATCAAC+AGG - chr6_1:76251-76270 None:intergenic 40.0%
TTTGTAACCAGGAACTTCAC+GGG - chr6_1:76273-76292 None:intergenic 40.0%
CTTATAGGCTTCTTCCTACA+GGG + chr6_1:76297-76316 Msa0867340:CDS 40.0%
TTTCCTCAAATCGGTCATCT+CGG - chr6_1:76345-76364 None:intergenic 40.0%
!!! CTTCCTTGTCATTTTGCCTT+AGG + chr6_1:76377-76396 Msa0867340:CDS 40.0%
GGGAGAAATAGAAATCACCA+AGG + chr6_1:76479-76498 Msa0867340:intron 40.0%
GCTTAAGAATAGCACATGCT+AGG - chr6_1:76505-76524 None:intergenic 40.0%
! GCAAAGATTGCTGTTAAACC+CGG + chr6_1:76545-76564 Msa0867340:CDS 40.0%
! TTGTTAGTGTTCTGGATACC+GGG - chr6_1:76566-76585 None:intergenic 40.0%
AAAACATACACTGAGCTCGT+CGG - chr6_1:76600-76619 None:intergenic 40.0%
GTTATGGTGCAGACATTAAC+AGG + chr6_1:76748-76767 Msa0867340:intron 40.0%
AGTACAGGATGTTGAAGAGA+AGG + chr6_1:76882-76901 Msa0867340:CDS 40.0%
! TGCTCTATGCAATTTGTTCG+CGG - chr6_1:77241-77260 None:intergenic 40.0%
GGCCAAAATAGAATCATCCA+TGG + chr6_1:77272-77291 Msa0867340:CDS 40.0%
CTTCATCTGTGATTGTTTCC+TGG - chr6_1:77320-77339 None:intergenic 40.0%
AATCACAGATGAAGAACGAG+TGG + chr6_1:77326-77345 Msa0867340:CDS 40.0%
AGGTTACTGGAATATGAGAG+TGG + chr6_1:77588-77607 Msa0867340:CDS 40.0%
TTACTGGAATATGAGAGTGG+TGG + chr6_1:77591-77610 Msa0867340:CDS 40.0%
TTTCTAGGCCTTAGAGTAAG+TGG - chr6_1:77690-77709 None:intergenic 40.0%
GCCTAGAAACCTTCTAACAA+AGG + chr6_1:77701-77720 Msa0867340:CDS 40.0%
GCCTTTGTTAGAAGGTTTCT+AGG - chr6_1:77705-77724 None:intergenic 40.0%
ATGCCTTTGCCTTTGTTAGA+AGG - chr6_1:77713-77732 None:intergenic 40.0%
TGATCTTGCATGAACTGTAC+AGG + chr6_1:77830-77849 Msa0867340:intron 40.0%
!! ATTCTGAGGTGTGATCTAGT+TGG - chr6_1:78216-78235 None:intergenic 40.0%
!! AGAAAAAGGGTATCTCACTC+GGG - chr6_1:78242-78261 None:intergenic 40.0%
!! GAGAAAAAGGGTATCTCACT+CGG - chr6_1:78243-78262 None:intergenic 40.0%
!! ATCCAGTTTTGTAGGGTTGA+AGG + chr6_1:78438-78457 Msa0867340:intron 40.0%
AACCTTCAACCCTACAAAAC+TGG - chr6_1:78443-78462 None:intergenic 40.0%
TGAGAGAAACCTTGAACCTT+GGG + chr6_1:78485-78504 Msa0867340:intron 40.0%
ACTCACCTTCTCTTCCTTTA+CGG - chr6_1:79153-79172 None:intergenic 40.0%
TAAACCCGACCCAAGAAAAT+CGG + chr6_1:79265-79284 Msa0867340:intron 40.0%
! TTTACCCGATTTTCTTGGGT+CGG - chr6_1:79273-79292 None:intergenic 40.0%
!! TAAATTTGGGCTTTTCTGGC+AGG + chr6_1:79289-79308 Msa0867340:intron 40.0%
TAAGTATCAGTTATGGAGCC+GGG - chr6_1:79330-79349 None:intergenic 40.0%
CTAGATTGAATCGGGATACA+TGG + chr6_1:79445-79464 Msa0867340:intron 40.0%
ACATTGTATCCCATGTATCG+TGG - chr6_1:79478-79497 None:intergenic 40.0%
TCATGGGATACTAATTGCAC+TGG + chr6_1:79562-79581 Msa0867340:CDS 40.0%
CTGGAACAAATATCCCTAAG+AGG + chr6_1:79581-79600 Msa0867340:CDS 40.0%
CTACTGTAAACAAGCCTCTT+AGG - chr6_1:79598-79617 None:intergenic 40.0%
GCAGTCATCATGAAACTTCA+AGG - chr6_1:80054-80073 None:intergenic 40.0%
TTCTGTGATTCCGATGCTTT+AGG + chr6_1:80182-80201 Msa0867340:three_prime_UTR 40.0%
ATCAAAAGGCAGGCATACAA+TGG + chr6_1:80208-80227 Msa0867340:three_prime_UTR 40.0%
GTAAATTACCTTATTGCCCC+TGG + chr6_1:80312-80331 Msa0867340:three_prime_UTR 40.0%
ATGAAAAACCAGGGGCAATA+AGG - chr6_1:80323-80342 None:intergenic 40.0%
AAGTCAATCCAAACAAGTCG+CGG - chr6_1:80551-80570 None:intergenic 40.0%
TTCCCATAACCTCTCTCAAA+CGG - chr6_1:80617-80636 None:intergenic 40.0%
ACGCTTATTCTGTAAGTGCT+TGG + chr6_1:80769-80788 Msa0867340:three_prime_UTR 40.0%
! TTGGGGATGATGATGTGAAG+TGG - chr6_1:73088-73107 None:intergenic 45.0%
GAGAGAGTGATGAGTGAGAA+TGG - chr6_1:73259-73278 None:intergenic 45.0%
! TGGGTTAGGAGAAGACTGAT+GGG - chr6_1:73380-73399 None:intergenic 45.0%
! TTGGGTTAGGAGAAGACTGA+TGG - chr6_1:73381-73400 None:intergenic 45.0%
!!! GGATTTTTTGTGAGCCATGG+TGG - chr6_1:73406-73425 None:intergenic 45.0%
! GGATCGTCCGGATGTTTTAT+TGG + chr6_1:73663-73682 Msa0867340:CDS 45.0%
GAGAGGAAGAGAGAGAATTG+AGG + chr6_1:73728-73747 Msa0867340:CDS 45.0%
!! AGGAGTATTGATAGTGGTGG+TGG + chr6_1:73748-73767 Msa0867340:CDS 45.0%
!! AGTATTGATAGTGGTGGTGG+TGG + chr6_1:73751-73770 Msa0867340:CDS 45.0%
!! TAGTGGTGGTGGTGGAATTA+AGG + chr6_1:73759-73778 Msa0867340:CDS 45.0%
!! TGGTGGTGGAATTAAGGAAG+AGG + chr6_1:73765-73784 Msa0867340:CDS 45.0%
!! GGTGGTGGAATTAAGGAAGA+GGG + chr6_1:73766-73785 Msa0867340:CDS 45.0%
! GTGGTGGAATTAAGGAAGAG+GGG + chr6_1:73767-73786 Msa0867340:CDS 45.0%
AGGAAGAGGGGTTTAAGAAG+AGG + chr6_1:73779-73798 Msa0867340:CDS 45.0%
TTGAGGAGGTTGAGAAGAGA+GGG + chr6_1:73850-73869 Msa0867340:CDS 45.0%
AGGGTATGCATTTGAGAGAG+AGG + chr6_1:73869-73888 Msa0867340:CDS 45.0%
GGGTATGCATTTGAGAGAGA+GGG + chr6_1:73870-73889 Msa0867340:CDS 45.0%
TGGAGAAGATTCATGAGAGC+TGG + chr6_1:73929-73948 Msa0867340:CDS 45.0%
AGAAGATTCATGAGAGCTGG+AGG + chr6_1:73932-73951 Msa0867340:CDS 45.0%
TCATGAGAGCTGGAGGAAAA+AGG + chr6_1:73939-73958 Msa0867340:CDS 45.0%
! GGAGGAAAAAGGAGTTGGTT+AGG + chr6_1:73950-73969 Msa0867340:CDS 45.0%
!! AGAAGCACTAACACGGACAT+CGG - chr6_1:74166-74185 None:intergenic 45.0%
CGCCCTTGCAAGTGAAATAA+AGG - chr6_1:74208-74227 None:intergenic 45.0%
GGTTGCTCATGAGATTGTTG+AGG + chr6_1:74509-74528 Msa0867340:intron 45.0%
! GTGTAAAGGCGCGATTATAG+AGG - chr6_1:75188-75207 None:intergenic 45.0%
TTCTTAATGTGCACCTGTCG+TGG + chr6_1:75751-75770 Msa0867340:intron 45.0%
TTACTTGACTGAACCACGAC+AGG - chr6_1:75767-75786 None:intergenic 45.0%
ATGTAACCAACCCTCCTGTT+CGG - chr6_1:75938-75957 None:intergenic 45.0%
CTTTACATCGAGTTCCTTCG+GGG - chr6_1:76018-76037 None:intergenic 45.0%
CCTTTACATCGAGTTCCTTC+GGG - chr6_1:76019-76038 None:intergenic 45.0%
CTCGATGTAAAGGAAGGTGA+TGG + chr6_1:76026-76045 Msa0867340:CDS 45.0%
TTTCGTTCCGGATGTCTCAT+CGG + chr6_1:76052-76071 Msa0867340:CDS 45.0%
!! CTCACTATTTTCGAGGGATG+AGG - chr6_1:76111-76130 None:intergenic 45.0%
GCCTGAGAAAATGACAGAAG+AGG + chr6_1:76154-76173 Msa0867340:CDS 45.0%
! TAGGTCCTCGATTTGATGGA+TGG + chr6_1:76207-76226 Msa0867340:CDS 45.0%
! TCCTCGATTTGATGGATGGT+GGG + chr6_1:76211-76230 Msa0867340:CDS 45.0%
TTGTAACCAGGAACTTCACG+GGG - chr6_1:76272-76291 None:intergenic 45.0%
CCTGTAGGAAGAAGCCTATA+AGG - chr6_1:76299-76318 None:intergenic 45.0%
CCTTATAGGCTTCTTCCTAC+AGG + chr6_1:76296-76315 Msa0867340:CDS 45.0%
GAAGCCTAGAACGATGAACA+AGG + chr6_1:76701-76720 Msa0867340:intron 45.0%
ATGGTGCAGACATTAACAGG+AGG + chr6_1:76751-76770 Msa0867340:intron 45.0%
!!! TGCAGTTTTGGCTGAAAGAC+AGG + chr6_1:76846-76865 Msa0867340:CDS 45.0%
AGGATGTTGAAGAGAAGGTG+CGG + chr6_1:76887-76906 Msa0867340:CDS 45.0%
GTTGCTTCACCTTGTACAGA+CGG - chr6_1:76934-76953 None:intergenic 45.0%
AACTCAGCTAAAGATCCAGC+CGG - chr6_1:76961-76980 None:intergenic 45.0%
GCATAGAGCAGAAAAGCTGT+TGG + chr6_1:77251-77270 Msa0867340:CDS 45.0%
GAATCATCCATGGTTCCAGT+TGG + chr6_1:77282-77301 Msa0867340:CDS 45.0%
TGGTCATAATCAGGACCAAC+TGG - chr6_1:77300-77319 None:intergenic 45.0%
AGTTGGTCCTGATTATGACC+AGG + chr6_1:77299-77318 Msa0867340:CDS 45.0%
! GGTATACGTGGTGTTTTCGA+TGG + chr6_1:77471-77490 Msa0867340:intron 45.0%
! CTTTTGTCGAAGACACAGCT+AGG + chr6_1:77568-77587 Msa0867340:CDS 45.0%
CTTCATGCTCCAGTCATCTT+CGG - chr6_1:78179-78198 None:intergenic 45.0%
ATGACTGGAGCATGAAGGAA+GGG + chr6_1:78182-78201 Msa0867340:CDS 45.0%
GTAGGGTTGAAGGTTGAGTT+AGG + chr6_1:78448-78467 Msa0867340:intron 45.0%
CTGAGAGAAACCTTGAACCT+TGG + chr6_1:78484-78503 Msa0867340:intron 45.0%
ATTATCGCACCCAAGGTTCA+AGG - chr6_1:78497-78516 None:intergenic 45.0%
AGAAGCCGTAAAGGAAGAGA+AGG + chr6_1:79145-79164 Msa0867340:intron 45.0%
GTAAAGGAAGAGAAGGTGAG+TGG + chr6_1:79152-79171 Msa0867340:intron 45.0%
! AAGAGAAGGTGAGTGGCTTT+TGG + chr6_1:79159-79178 Msa0867340:intron 45.0%
! AGAGAAGGTGAGTGGCTTTT+GGG + chr6_1:79160-79179 Msa0867340:intron 45.0%
AAACCCGACCCAAGAAAATC+GGG + chr6_1:79266-79285 Msa0867340:intron 45.0%
! TTACCCGATTTTCTTGGGTC+GGG - chr6_1:79272-79291 None:intergenic 45.0%
! CGGGTAAATTTGGGCTTTTC+TGG + chr6_1:79285-79304 Msa0867340:intron 45.0%
GCATTTCAGTTGCAGAAACC+AGG - chr6_1:79402-79421 None:intergenic 45.0%
GAGGATGACGAAGATTCTGA+TGG + chr6_1:79928-79947 Msa0867340:CDS 45.0%
ATGATGAGGAAGAGACCGAT+TGG + chr6_1:79956-79975 Msa0867340:CDS 45.0%
TGATGAGGAAGAGACCGATT+GGG + chr6_1:79957-79976 Msa0867340:CDS 45.0%
ACCAATCTAGCTGCAGGTAA+TGG - chr6_1:80079-80098 None:intergenic 45.0%
GTTGATACCAATCTAGCTGC+AGG - chr6_1:80085-80104 None:intergenic 45.0%
AGTCAATCCAAACAAGTCGC+GGG - chr6_1:80550-80569 None:intergenic 45.0%
AAGCTATCATGGCGAGCTTA+CGG - chr6_1:80679-80698 None:intergenic 45.0%
CACAACAGTAAGGCCATGTT+TGG - chr6_1:80808-80827 None:intergenic 45.0%
! TTGTGAGCCATGGTGGTGTT+GGG - chr6_1:73399-73418 None:intergenic 50.0%
! TTTGTGAGCCATGGTGGTGT+TGG - chr6_1:73400-73419 None:intergenic 50.0%
! GGAGATTCAGCGACCCTTTT+GGG - chr6_1:73436-73455 None:intergenic 50.0%
! AGGAGATTCAGCGACCCTTT+TGG - chr6_1:73437-73456 None:intergenic 50.0%
CTCTCTTCCTCTCTCTTCCA+TGG - chr6_1:73721-73740 None:intergenic 50.0%
GTTGAGGAGGTTGAGAAGAG+AGG + chr6_1:73849-73868 Msa0867340:CDS 50.0%
GAGCTGGAGGAAAAAGGAGT+TGG + chr6_1:73945-73964 Msa0867340:CDS 50.0%
!! TTCACTTGCAAGGGCGTCAA+TGG + chr6_1:74212-74231 Msa0867340:intron 50.0%
! GCGGATAAGCTTGCTTCTCA+TGG + chr6_1:74986-75005 Msa0867340:intron 50.0%
TCCTCAATCGTGTTACAGCC+AGG - chr6_1:75094-75113 None:intergenic 50.0%
AATCGCGCCTTTACACTCAC+CGG + chr6_1:75192-75211 Msa0867340:intron 50.0%
!! AAAGGCACCGGTGAGTGTAA+AGG - chr6_1:75202-75221 None:intergenic 50.0%
!! GAACAGGAGGGTTGGTTACA+TGG + chr6_1:75937-75956 Msa0867340:CDS 50.0%
CCCGAAGGAACTCGATGTAA+AGG + chr6_1:76016-76035 Msa0867340:CDS 50.0%
TTCGTTCCGGATGTCTCATC+GGG + chr6_1:76053-76072 Msa0867340:CDS 50.0%
! GTCCTCGATTTGATGGATGG+TGG + chr6_1:76210-76229 Msa0867340:CDS 50.0%
! CCTCGATTTGATGGATGGTG+GGG + chr6_1:76212-76231 Msa0867340:CDS 50.0%
!! TTTGATGGATGGTGGGGTAC+AGG + chr6_1:76218-76237 Msa0867340:CDS 50.0%
TTACTTCCCCGTGAAGTTCC+TGG + chr6_1:76263-76282 Msa0867340:CDS 50.0%
GAATAGCACATGCTAGGCCT+TGG - chr6_1:76499-76518 None:intergenic 50.0%
GGGAAGGACTTTGTTCCAAC+AGG + chr6_1:76817-76836 Msa0867340:CDS 50.0%
GGACTTTGTTCCAACAGGTG+TGG + chr6_1:76822-76841 Msa0867340:CDS 50.0%
AAAACTGCAGCCACACCTGT+TGG - chr6_1:76835-76854 None:intergenic 50.0%
! AACAGGTGTGGCTGCAGTTT+TGG + chr6_1:76834-76853 Msa0867340:CDS 50.0%
GTTGCAACTCCGTCTGTACA+AGG + chr6_1:76922-76941 Msa0867340:CDS 50.0%
ACAAGGTGAAGCAACAGCAC+CGG + chr6_1:76939-76958 Msa0867340:CDS 50.0%
ATCAGGACCAACTGGAACCA+TGG - chr6_1:77292-77311 None:intergenic 50.0%
CGAAGACACAGCTAGGTTAC+TGG + chr6_1:77575-77594 Msa0867340:CDS 50.0%
! TGAGAGTGGTGGAATACTCG+TGG + chr6_1:77602-77621 Msa0867340:CDS 50.0%
ACAAGCGGCCACTTACTCTA+AGG + chr6_1:77679-77698 Msa0867340:CDS 50.0%
AGGGTCTATCCGAAGATGAC+TGG + chr6_1:78167-78186 Msa0867340:intron 50.0%
CGAAGATGACTGGAGCATGA+AGG + chr6_1:78177-78196 Msa0867340:CDS 50.0%
GATGACTGGAGCATGAAGGA+AGG + chr6_1:78181-78200 Msa0867340:CDS 50.0%
TCTCACTCGGGTGAATTCTG+AGG - chr6_1:78230-78249 None:intergenic 50.0%
AGGTCATGCAAAACCTGACC+CGG + chr6_1:79309-79328 Msa0867340:intron 50.0%
TTCAGTTGCAGAAACCAGGC+CGG - chr6_1:79398-79417 None:intergenic 50.0%
TGGGATACGTCCACGATACA+TGG + chr6_1:79465-79484 Msa0867340:intron 50.0%
GGGATACGTCCACGATACAT+GGG + chr6_1:79466-79485 Msa0867340:intron 50.0%
! CGAGGAGGACTCTGAGTTTT+TGG + chr6_1:79984-80003 Msa0867340:CDS 50.0%
GCCATTACCTGCAGCTAGAT+TGG + chr6_1:80075-80094 Msa0867340:three_prime_UTR 50.0%
GTCAATCCAAACAAGTCGCG+GGG - chr6_1:80549-80568 None:intergenic 50.0%
ACTGTTTGGCCGTTTGAGAG+AGG + chr6_1:80605-80624 Msa0867340:three_prime_UTR 50.0%
TGGCCGTTTGAGAGAGGTTA+TGG + chr6_1:80611-80630 Msa0867340:three_prime_UTR 50.0%
GGCCGTTTGAGAGAGGTTAT+GGG + chr6_1:80612-80631 Msa0867340:three_prime_UTR 50.0%
AGCTATCATGGCGAGCTTAC+GGG - chr6_1:80678-80697 None:intergenic 50.0%
CTCCTAACCCAACACCACCA+TGG + chr6_1:73389-73408 Msa0867340:CDS 55.0%
! AGCCATGGTGGTGTTGGGTT+AGG - chr6_1:73394-73413 None:intergenic 55.0%
!! GCGACCCTTTTGGGAGAAGA+TGG - chr6_1:73427-73446 None:intergenic 55.0%
GGTGGTTCCATGGAAGAGAG+AGG + chr6_1:73711-73730 Msa0867340:CDS 55.0%
GCCTGGCTGTAACACGATTG+AGG + chr6_1:75090-75109 Msa0867340:intron 55.0%
!! GGGTTGGTTACATGGAGAGC+AGG + chr6_1:75945-75964 Msa0867340:CDS 55.0%
CCCCACCATCCATCAAATCG+AGG - chr6_1:76215-76234 None:intergenic 55.0%
!! GTGCCGAGATGACCGATTTG+AGG + chr6_1:76339-76358 Msa0867340:CDS 55.0%
!! CAGGAGGTACCTTGCTGCTA+AGG + chr6_1:76767-76786 Msa0867340:CDS 55.0%
TCTATGAGGCCCAAGCTCGT+TGG + chr6_1:76980-76999 Msa0867340:CDS 55.0%
CTATGAGGCCCAAGCTCGTT+GGG + chr6_1:76981-77000 Msa0867340:CDS 55.0%
TATGAGGCCCAAGCTCGTTG+GGG + chr6_1:76982-77001 Msa0867340:CDS 55.0%
TGTAGCCATGCTACGCCATG+AGG + chr6_1:77743-77762 Msa0867340:CDS 55.0%
AGGAACCTCATGGCGTAGCA+TGG - chr6_1:77751-77770 None:intergenic 55.0%
ATCAGTTATGGAGCCGGGTC+AGG - chr6_1:79325-79344 None:intergenic 55.0%
TCAGTTGCAGAAACCAGGCC+GGG - chr6_1:79397-79416 None:intergenic 55.0%
ACCCTGATACGTATCGCCCA+TGG + chr6_1:79511-79530 Msa0867340:CDS 55.0%
GCCATGGGCGATACGTATCA+GGG - chr6_1:79515-79534 None:intergenic 55.0%
AGCCATGGGCGATACGTATC+AGG - chr6_1:79516-79535 None:intergenic 55.0%
! CGTATCGCCCATGGCTGTTT+TGG + chr6_1:79520-79539 Msa0867340:CDS 55.0%
AGAGACCGATTGGGATGACG+AGG + chr6_1:79966-79985 Msa0867340:CDS 55.0%
GTCCTCCTCGTCATCCCAAT+CGG - chr6_1:79974-79993 None:intergenic 55.0%
GACGTCGATGAGCATCCTGA+AGG + chr6_1:80012-80031 Msa0867340:CDS 55.0%
GCATCGGAATCACAGAACCG+AGG - chr6_1:80179-80198 None:intergenic 55.0%
! CTTGTACCCCGCGACTTGTT+TGG + chr6_1:80540-80559 Msa0867340:three_prime_UTR 55.0%
TCGGCGCTGCACACTACAAC+AGG - chr6_1:75919-75938 None:intergenic 60.0%
! TGTAGTGTGCAGCGCCGAAC+AGG + chr6_1:75921-75940 Msa0867340:intron 60.0%
TCAAGGTCCTGCTTCCCCGA+AGG + chr6_1:76001-76020 Msa0867340:CDS 60.0%
TCGAGTTCCTTCGGGGAAGC+AGG - chr6_1:76011-76030 None:intergenic 60.0%
! AGTCGAGAGCGCATCCCTGT+AGG - chr6_1:76314-76333 None:intergenic 60.0%
GTCCCTTCCCCAACGAGCTT+GGG - chr6_1:76992-77011 None:intergenic 60.0%
TGTCCCTTCCCCAACGAGCT+TGG - chr6_1:76993-77012 None:intergenic 60.0%
CGAGTGGTGTTCCGCCAGAT+TGG + chr6_1:77342-77361 Msa0867340:CDS 60.0%
GACCGATTGGGATGACGAGG+AGG + chr6_1:79969-79988 Msa0867340:CDS 60.0%
! AGTGTGCAGCGCCGAACAGG+AGG + chr6_1:75924-75943 Msa0867340:intron 65.0%
! GTGTGCAGCGCCGAACAGGA+GGG + chr6_1:75925-75944 Msa0867340:intron 65.0%
!! GGTGAAGCAACAGCACCGGC+TGG + chr6_1:76943-76962 Msa0867340:CDS 65.0%
AGGCCCAAGCTCGTTGGGGA+AGG + chr6_1:76986-77005 Msa0867340:CDS 65.0%
GGCCCAAGCTCGTTGGGGAA+GGG + chr6_1:76987-77006 Msa0867340:CDS 65.0%
! TTTTGCCCGGTCGCGCAACC+CGG + chr6_1:79376-79395 Msa0867340:intron 65.0%
! GCAGCGCCGAACAGGAGGGT+TGG + chr6_1:75929-75948 Msa0867340:intron 70.0%
ACCAGGCCGGGTTGCGCGAC+CGG - chr6_1:79385-79404 None:intergenic 75.0%
! CCAGGCCGGGTTGCGCGACC+GGG - chr6_1:79384-79403 None:intergenic 80.0%
! CCCGGTCGCGCAACCCGGCC+TGG + chr6_1:79381-79400 Msa0867340:intron 85.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 73045 80877 73045 ID=Msa0867340;Name=Msa0867340
chr6_1 mRNA 73045 80877 73045 ID=Msa0867340-mRNA-1;Parent=Msa0867340;Name=Msa0867340-mRNA-1;_AED=0.08;_eAED=0.08;_QI=166|0.7|0.81|0.81|1|1|11|839|883
chr6_1 exon 73045 74029 73045 ID=Msa0867340-mRNA-1:exon:14;Parent=Msa0867340-mRNA-1
chr6_1 exon 75933 76398 75933 ID=Msa0867340-mRNA-1:exon:15;Parent=Msa0867340-mRNA-1
chr6_1 exon 76480 76610 76480 ID=Msa0867340-mRNA-1:exon:16;Parent=Msa0867340-mRNA-1
chr6_1 exon 76760 77104 76760 ID=Msa0867340-mRNA-1:exon:17;Parent=Msa0867340-mRNA-1
chr6_1 exon 77237 77393 77237 ID=Msa0867340-mRNA-1:exon:18;Parent=Msa0867340-mRNA-1
chr6_1 exon 77472 77764 77472 ID=Msa0867340-mRNA-1:exon:19;Parent=Msa0867340-mRNA-1
chr6_1 exon 77852 77911 77852 ID=Msa0867340-mRNA-1:exon:20;Parent=Msa0867340-mRNA-1
chr6_1 exon 78169 78243 78169 ID=Msa0867340-mRNA-1:exon:21;Parent=Msa0867340-mRNA-1
chr6_1 exon 79511 79634 79511 ID=Msa0867340-mRNA-1:exon:22;Parent=Msa0867340-mRNA-1
chr6_1 exon 79711 79778 79711 ID=Msa0867340-mRNA-1:exon:23;Parent=Msa0867340-mRNA-1
chr6_1 exon 79925 80877 79925 ID=Msa0867340-mRNA-1:exon:24;Parent=Msa0867340-mRNA-1
chr6_1 five_prime_UTR 73045 73210 73045 ID=Msa0867340-mRNA-1:five_prime_utr;Parent=Msa0867340-mRNA-1
chr6_1 CDS 73211 74029 73211 ID=Msa0867340-mRNA-1:cds;Parent=Msa0867340-mRNA-1
chr6_1 CDS 75933 76398 75933 ID=Msa0867340-mRNA-1:cds;Parent=Msa0867340-mRNA-1
chr6_1 CDS 76480 76610 76480 ID=Msa0867340-mRNA-1:cds;Parent=Msa0867340-mRNA-1
chr6_1 CDS 76760 77104 76760 ID=Msa0867340-mRNA-1:cds;Parent=Msa0867340-mRNA-1
chr6_1 CDS 77237 77393 77237 ID=Msa0867340-mRNA-1:cds;Parent=Msa0867340-mRNA-1
chr6_1 CDS 77472 77764 77472 ID=Msa0867340-mRNA-1:cds;Parent=Msa0867340-mRNA-1
chr6_1 CDS 77852 77911 77852 ID=Msa0867340-mRNA-1:cds;Parent=Msa0867340-mRNA-1
chr6_1 CDS 78169 78243 78169 ID=Msa0867340-mRNA-1:cds;Parent=Msa0867340-mRNA-1
chr6_1 CDS 79511 79634 79511 ID=Msa0867340-mRNA-1:cds;Parent=Msa0867340-mRNA-1
chr6_1 CDS 79711 79778 79711 ID=Msa0867340-mRNA-1:cds;Parent=Msa0867340-mRNA-1
chr6_1 CDS 79925 80038 79925 ID=Msa0867340-mRNA-1:cds;Parent=Msa0867340-mRNA-1
chr6_1 three_prime_UTR 80039 80877 80039 ID=Msa0867340-mRNA-1:three_prime_utr;Parent=Msa0867340-mRNA-1
Gene Sequence

>Msa0867340

ATGTCATTCCCAAACACCACTTGTAACAATTCATCATCATCATCACCATTCTCACTCATCACTCTCTCTCGCTCCTCATTCACTCTCTCTCATAATCATCACTTTCTCTCTCATCCCAAAAAACCCTCATTTCCTTCTCTCACTACTTTCTCTTCTCTCAAAACAACCCATCAGTCTTCTCCTAACCCAACACCACCATGGCTCACAAAAAATCCATCTTCTCCCAAAAGGGTCGCTGAATCTCCTATCAAAGATGACCCTTTTCAACCACATCCTCAAAAACCGAAAAATCCTGTTGAAAGAATTGTTTTTAGGTTAAGAAACTTAGGTTTAGTAGAAGAAGAAGATGATGAACAAGAAGAAAAAGTTAAAGAAGAAGAAGAAGAAGTTAAGTTGAGTGCATTGAAAGTTACTGGTGATGAGAAGTTAAGTGAATTGTTGAAGATAAAATGGGATCGTCCGGATGTTTTATTGGATGAGGAAGATGAAGAAGAGAAAATGGTGGTTCCATGGAAGAGAGAGGAAGAGAGAGAATTGAGGAGTATTGATAGTGGTGGTGGTGGAATTAAGGAAGAGGGGTTTAAGAAGAGGACATTAAAGGCACCATCTTTAGCTGAATTGACACTTGAGGATGAATTGTTGAGGAGGTTGAGAAGAGAGGGTATGCATTTGAGAGAGAGGGTTAATGTACCTAAAGCTGGATTGACACAAGAGGTTATGGAGAAGATTCATGAGAGCTGGAGGAAAAAGGAGTTGGTTAGGCTTAAGTTTCATGAAGAGCTTGCTAAGAATATGAGGATTGCTCATCAGATTGTTGAGCGCCGAACAGGAGGGTTGGTTACATGGAGAGCAGGAAGTGTTATGATCGTGTATCGTGGTAAAAATTATCAAGGTCCTGCTTCCCCGAAGGAACTCGATGTAAAGGAAGGTGATGGTTTTTTCGTTCCGGATGTCTCATCGGGAAATTTGTCGAAAACAAAAGACAATAATGCAACCTCATCCCTCGAAAATAGTGAGCTAGTTGGGAGGAACATTGAACTGCCTGAGAAAATGACAGAAGAGGAAGCAGAGTACAATGCGCTGCTTGATGATTTAGGTCCTCGATTTGATGGATGGTGGGGTACAGGAATACCTCCTGTTGATGCTGATTTACTTCCCCGTGAAGTTCCTGGTTACAAAACACCTTATAGGCTTCTTCCTACAGGGATGCGCTCTCGACTAACAAGTGCCGAGATGACCGATTTGAGGAAAATTGCAAAGTCACTTCCTTGTCATTTTGCCTTAGGGAGAAATAGAAATCACCAAGGCCTAGCATGTGCTATTCTTAAGCTTTGGGAGAAGAGTTTAATCGCAAAGATTGCTGTTAAACCCGGTATCCAGAACACTAACAATAAACTAATGGCCGACGAGCTCAGTACATTAACAGGAGGTACCTTGCTGCTAAGGAATAGATATTTCATTGTTATATATCGTGGGAAGGACTTTGTTCCAACAGGTGTGGCTGCAGTTTTGGCTGAAAGACAGGAATTGACAAAACAAGTACAGGATGTTGAAGAGAAGGTGCGGTGCAAAGATGTTGTTGCAACTCCGTCTGTACAAGGTGAAGCAACAGCACCGGCTGGATCTTTAGCTGAGTTCTATGAGGCCCAAGCTCGTTGGGGAAGGGACATATCTTCTGAAGAACAAGAGAGGATGATAAAAGAAGCTACCAAAGCCAAGAATGTTAAGCTTGTCAAACAAATTGAACACAAACTCTCTCTTGCCGCGAACAAATTGCATAGAGCAGAAAAGCTGTTGGCCAAAATAGAATCATCCATGGTTCCAGTTGGTCCTGATTATGACCAGGAAACAATCACAGATGAAGAACGAGTGGTGTTCCGCCAGATTGGTTTAAGAATGAAGGCATACTTACAACTTGGTATACGTGGTGTTTTCGATGGTGTCATTGAGAACATGCATTTGCATTGGAAACACCGAGAACTTGTTAAATTAGTAACAAAACAGAAGAATCGTGCTTTTGTCGAAGACACAGCTAGGTTACTGGAATATGAGAGTGGTGGAATACTCGTGGCAATAGAGAAAGTTTCAAAAGAATTTGCTATTATTTACTATCGTGGAAAAAATTACAAGCGGCCACTTACTCTAAGGCCTAGAAACCTTCTAACAAAGGCAAAGGCATTGAAGCGTTCTGTAGCCATGCTACGCCATGAGGCTCTGAGTAACCATATTACAGAATTGGAAACAACCATAGAACAAATGAAACAAGAACTTGGTCTATCCGAAGATGACTGGAGCATGAAGGAAGGGCATGAAAACCAACTAGATCACACCTCAGAATTCACCCGAACCCTGATACGTATCGCCCATGGCTGTTTTGGTATCATATTGGGATACGTATCATGGGATACTAATTGCACTGGAACAAATATCCCTAAGAGGCTTGTTTACAGTAGCTTGATTTCACTAGAAGAAACAAGCTTAATGCATTTCATTCTGTATACATGTTGGAATATTGATAAAAATACAGAAACTAGCAAGAGTGAGGATGACGAAGATTCTGATGGTTTTGATGATGAGGAAGAGACCGATTGGGATGACGAGGAGGACTCTGAGTTTTTGGAACTCGACGTCGATGAGCATCCTGAAGGCTAG
Protein sequence

>Msa0867340

MSFPNTTCNNSSSSSPFSLITLSRSSFTLSHNHHFLSHPKKPSFPSLTTFSSLKTTHQSSPNPTPPWLTKNPSSPKRVAESPIKDDPFQPHPQKPKNPVERIVFRLRNLGLVEEEDDEQEEKVKEEEEEVKLSALKVTGDEKLSELLKIKWDRPDVLLDEEDEEEKMVVPWKREEERELRSIDSGGGGIKEEGFKKRTLKAPSLAELTLEDELLRRLRREGMHLRERVNVPKAGLTQEVMEKIHESWRKKELVRLKFHEELAKNMRIAHQIVERRTGGLVTWRAGSVMIVYRGKNYQGPASPKELDVKEGDGFFVPDVSSGNLSKTKDNNATSSLENSELVGRNIELPEKMTEEEAEYNALLDDLGPRFDGWWGTGIPPVDADLLPREVPGYKTPYRLLPTGMRSRLTSAEMTDLRKIAKSLPCHFALGRNRNHQGLACAILKLWEKSLIAKIAVKPGIQNTNNKLMADELSTLTGGTLLLRNRYFIVIYRGKDFVPTGVAAVLAERQELTKQVQDVEEKVRCKDVVATPSVQGEATAPAGSLAEFYEAQARWGRDISSEEQERMIKEATKAKNVKLVKQIEHKLSLAANKLHRAEKLLAKIESSMVPVGPDYDQETITDEERVVFRQIGLRMKAYLQLGIRGVFDGVIENMHLHWKHRELVKLVTKQKNRAFVEDTARLLEYESGGILVAIEKVSKEFAIIYYRGKNYKRPLTLRPRNLLTKAKALKRSVAMLRHEALSNHITELETTIEQMKQELGLSEDDWSMKEGHENQLDHTSEFTRTLIRIAHGCFGIILGYVSWDTNCTGTNIPKRLVYSSLISLEETSLMHFILYTCWNIDKNTETSKSEDDEDSDGFDDEEETDWDDEEDSEFLELDVDEHPEG*