AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0452700

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0452700 MtrunA17_Chr3g0097801 97.765 537 12 0 1 537 1 537 0.0 1073
Msa0452700 MtrunA17_Chr2g0279961 33.636 440 253 10 90 520 179 588 2.07e-48 177
Msa0452700 MtrunA17_Chr3g0130801 31.648 455 249 14 78 515 239 648 7.14e-44 165
Msa0452700 MtrunA17_Chr8g0384851 30.995 442 257 11 85 515 181 585 9.62e-42 158
Msa0452700 MtrunA17_Chr8g0377701 32.298 322 196 6 1 316 13 318 6.04e-36 140
Msa0452700 MtrunA17_Chr8g0377681 26.534 554 304 19 18 531 18 508 1.29e-34 136
Msa0452700 MtrunA17_Chr4g0037521 26.476 525 291 15 37 520 29 499 1.07e-33 134
Msa0452700 MtrunA17_Chr8g0377651 26.223 511 308 15 46 531 44 510 1.68e-33 133
Msa0452700 MtrunA17_Chr8g0377691 33.094 278 175 5 46 316 44 317 1.81e-32 130
Msa0452700 MtrunA17_Chr8g0377641 30.719 306 194 6 17 316 21 314 2.90e-32 130
Msa0452700 MtrunA17_Chr8g0385461 31.020 245 153 4 43 282 163 396 7.78e-29 120
Msa0452700 MtrunA17_Chr1g0191741 46.429 112 60 0 141 252 63 174 6.37e-23 101
Msa0452700 MtrunA17_Chr4g0050371 45.631 103 56 0 151 253 119 221 2.55e-19 91.7
Msa0452700 MtrunA17_Chr8g0393041 41.441 111 65 0 143 253 101 211 5.97e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0452700 AT3G25660.1 73.557 537 135 3 3 534 1 535 0.0 773
Msa0452700 AT5G64440.1 28.337 487 299 11 48 520 139 589 1.01e-44 167
Msa0452700 AT4G34880.2 27.711 498 298 14 43 520 45 500 3.38e-30 124
Msa0452700 AT5G07360.1 29.876 241 155 3 43 278 205 436 1.00e-26 115
Msa0452700 AT5G07360.3 29.876 241 155 3 43 278 205 436 1.00e-26 115
Msa0452700 AT5G07360.2 29.876 241 148 4 43 278 205 429 4.20e-25 110
Msa0452700 AT1G08980.1 45.299 117 64 0 141 257 64 180 3.33e-22 99.8
Msa0452700 AT4G34880.1 24.187 492 277 15 43 520 45 454 5.94e-20 93.2
Msa0452700 AT5G09420.1 35.260 173 106 3 141 313 107 273 3.25e-19 91.7
Msa0452700 AT3G17970.2 40.909 110 65 0 144 253 97 206 9.54e-16 80.5
Msa0452700 AT3G17970.1 41.905 105 61 0 149 253 102 206 1.16e-15 80.5

Find 209 sgRNAs with CRISPR-Local

Find 682 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTGAAGCTTCTGCATTTC+AGG 0.094048 3_3:-41782978 Msa0452700:intron
GACATTACAGGCAAATATTT+TGG 0.147728 3_3:-41775716 Msa0452700:three_prime_UTR
CCAACCCGTGGGATGTTAAT+AGG 0.184295 3_3:-41781180 Msa0452700:CDS
CCTTCAGCTGCTTATAAAAT+TGG 0.189323 3_3:-41779443 Msa0452700:intron
GTCAAAATGAGATAGAAAAT+TGG 0.232450 3_3:+41780648 None:intergenic
CTTGATGCCATTGGCTGCTT+TGG 0.241283 3_3:-41780977 Msa0452700:CDS
GAGGAAGTTGGTCCTCTTGC+TGG 0.242177 3_3:-41783178 Msa0452700:CDS
CTTGAAGCTATTCCTTATAA+TGG 0.275796 3_3:+41779508 None:intergenic
GAAAATTTGGTTGACATTAC+AGG 0.277069 3_3:-41775728 Msa0452700:three_prime_UTR
TACCAAATAGAAGGAAAATT+TGG 0.281683 3_3:-41775741 Msa0452700:three_prime_UTR
GGTTCATCTGTCGCTGATGC+TGG 0.285798 3_3:-41780956 Msa0452700:CDS
TGGCTGAAGCAGGTATGTTT+AGG 0.296796 3_3:-41775775 Msa0452700:three_prime_UTR
CCATGTGGATTTATTGAGAA+TGG 0.335224 3_3:-41778454 Msa0452700:CDS
TGGTCACACATGATTGAATC+TGG 0.337048 3_3:-41775696 Msa0452700:three_prime_UTR
TGTCTCGCTATGATGGTATT+AGG 0.343270 3_3:-41780278 Msa0452700:intron
TGGTGTTCTTGTTGCTGTTA+AGG 0.344765 3_3:-41783158 Msa0452700:CDS
TATGGGCGCGTCTCAAGATT+TGG 0.346456 3_3:-41781022 Msa0452700:CDS
CCCTTGAAAGGACTGAGAAT+TGG 0.350069 3_3:-41780601 Msa0452700:CDS
CCTGTTGGCCTGCAAATGAT+TGG 0.354266 3_3:-41778418 Msa0452700:CDS
TGGTGAGAAGGGAGTGGCGG+AGG 0.367615 3_3:+41783347 None:intergenic
TCTTCTCATTGCTGAAACTT+AGG 0.372350 3_3:+41774089 None:intergenic
ATTCTCCTCCATGCAATTGC+TGG 0.372958 3_3:-41780932 Msa0452700:CDS
GAAGGGAGTGGCGGAGGGTG+AGG 0.374672 3_3:+41783353 None:intergenic
TGTTGTTGGGAAGACAAATA+TGG 0.379050 3_3:-41783023 Msa0452700:CDS
AAGACAAATATGGATGAGTT+TGG 0.381868 3_3:-41783013 Msa0452700:CDS
ATTGGTCGGAAGGGAGGTGG+AGG 0.387082 3_3:+41783248 None:intergenic
GGTGGAGGAAGGAACGGAGG+TGG 0.388259 3_3:+41783263 None:intergenic
ATGCTGCACCAATCATTTGC+AGG 0.388800 3_3:+41778410 None:intergenic
GAGATTGGTCGGAAGGGAGG+TGG 0.391446 3_3:+41783245 None:intergenic
CGGAGAGGGTGTTGGTGAGA+AGG 0.396294 3_3:+41783335 None:intergenic
GGGGTGCGGTTGTAGGTTGG+GGG 0.400004 3_3:+41783386 None:intergenic
CGGTCAGACGGAGGCGGGTG+AGG 0.402657 3_3:+41783290 None:intergenic
GAGTTGGGTGGGATTGTTGT+TGG 0.403136 3_3:-41783037 Msa0452700:CDS
AACAGGTGAGAACCATTATA+AGG 0.404504 3_3:-41779520 Msa0452700:intron
CGAGGATACTTGAGGGTTAT+CGG 0.406609 3_3:-41783096 Msa0452700:CDS
TCAAAATGAGATAGAAAATT+GGG 0.409705 3_3:+41780649 None:intergenic
GAGGGTGAGGATTTGAGAGG+GGG 0.409941 3_3:+41783366 None:intergenic
ACCAATTCTCAGTCCTTTCA+AGG 0.410994 3_3:+41780600 None:intergenic
AGAGAGTGGAACGTGGGGTT+TGG 0.412341 3_3:+41783461 None:intergenic
GAAGGAACGGAGGTGGGGTT+CGG 0.415482 3_3:+41783270 None:intergenic
CAACCCGTGGGATGTTAATA+GGG 0.416432 3_3:-41781179 Msa0452700:CDS
GGGGTTCGGTCAGACGGAGG+CGG 0.416687 3_3:+41783284 None:intergenic
GTAGGTTTGAAGCCAACATA+TGG 0.418336 3_3:-41781040 Msa0452700:CDS
AACTGCAGCTGCCGATCCTC+CGG 0.421581 3_3:+41781141 None:intergenic
GTTCAGTGTTACCAAATAGA+AGG 0.422874 3_3:-41775750 Msa0452700:three_prime_UTR
AGTTGGGTGGGATTGTTGTT+GGG 0.424283 3_3:-41783036 Msa0452700:CDS
CCAATCATTTGCAGGCCAAC+AGG 0.424765 3_3:+41778418 None:intergenic
GGCTGAAGCAGGTATGTTTA+GGG 0.424828 3_3:-41775774 Msa0452700:three_prime_UTR
GGAGAGGGTGTTGGTGAGAA+GGG 0.425159 3_3:+41783336 None:intergenic
GTGCCTGAGCGAGGAGAGAT+TGG 0.433862 3_3:+41783230 None:intergenic
GTGGAGGAAGGAACGGAGGT+GGG 0.435354 3_3:+41783264 None:intergenic
GAATCCCGAGCCAAAGGGTT+AGG 0.438985 3_3:-41780071 Msa0452700:CDS
GATCCTCCGGATGATCCTCC+TGG 0.440465 3_3:+41781154 None:intergenic
CTAGCTCATCAGCATAAACT+TGG 0.445051 3_3:+41780108 None:intergenic
GGAGGTGGAGGAAGGAACGG+AGG 0.445202 3_3:+41783260 None:intergenic
GGGGTGTGTGAGAGTAGCTT+GGG 0.445406 3_3:+41783405 None:intergenic
TTCACCGCCGTCGCATCAAA+TGG 0.448776 3_3:+41783070 None:intergenic
TCAACGCCATCAGCTATGAT+TGG 0.451573 3_3:+41775869 None:intergenic
TTAATAATATAAGATCAATA+AGG 0.458220 3_3:+41774065 None:intergenic
GTTCATCTGTCGCTGATGCT+GGG 0.461237 3_3:-41780955 Msa0452700:CDS
TCAGACGGAGGCGGGTGAGG+TGG 0.463017 3_3:+41783293 None:intergenic
GGGACATATGCCCTTTCAGC+TGG 0.466577 3_3:-41779873 Msa0452700:CDS
GAAAATGCGGTGGCTGAAGC+AGG 0.466998 3_3:-41775785 Msa0452700:three_prime_UTR
TAGGTAAATGTCAACCTAGC+TGG 0.467203 3_3:-41778496 Msa0452700:CDS
AGAACCTAACCCTTTGGCTC+GGG 0.470303 3_3:+41780067 None:intergenic
AGTAGCTTGGGTGGTGATGG+TGG 0.470306 3_3:+41783417 None:intergenic
ACACTTGATCAATCTATAGC+TGG 0.472209 3_3:+41775513 None:intergenic
TACCTCAGAACCTAACCCTT+TGG 0.473794 3_3:+41780061 None:intergenic
GGGTTCGGTCAGACGGAGGC+GGG 0.475235 3_3:+41783285 None:intergenic
GTATCGTTGGGAAGTGATAC+TGG 0.476953 3_3:-41781100 Msa0452700:CDS
AAATATGGATGAGTTTGGTA+TGG 0.478381 3_3:-41783008 Msa0452700:CDS
TGAAACTGATAAATTGTGTA+TGG 0.480278 3_3:+41775809 None:intergenic
GAGAGTAGCTTGGGTGGTGA+TGG 0.480412 3_3:+41783414 None:intergenic
TCCAACTTGTCTCGCTATGA+TGG 0.480589 3_3:-41780285 Msa0452700:CDS
GTGAAGAGAGTTAAGGAGTT+GGG 0.481622 3_3:-41783052 Msa0452700:CDS
GGAGGGTGAGGATTTGAGAG+GGG 0.482570 3_3:+41783365 None:intergenic
CGGCAGCTGCAGTTTCTGCC+AGG 0.482964 3_3:-41781132 Msa0452700:CDS
GATGAGCTAGACTCTCTCTA+TGG 0.484664 3_3:-41780095 Msa0452700:CDS
TGGGTGGTGATGGTGGATGA+TGG 0.484855 3_3:+41783424 None:intergenic
GGAACGTGGGGTTTGGAGTG+TGG 0.485069 3_3:+41783468 None:intergenic
CGACCAATCTCTCCTCGCTC+AGG 0.485149 3_3:-41783233 Msa0452700:CDS
TGGTGATGGTGGATGATGGA+AGG 0.487720 3_3:+41783428 None:intergenic
TGCTGGCAACCCAAGTGAAA+AGG 0.489336 3_3:+41780338 None:intergenic
ATTGAAGATGGTGTTGATGC+TGG 0.494844 3_3:-41780562 Msa0452700:CDS
CAGACGGAGGCGGGTGAGGT+GGG 0.495572 3_3:+41783294 None:intergenic
CAACGATACAACACATTGCC+TGG 0.499311 3_3:+41781114 None:intergenic
TGGGATGTTAATAGGGTGCC+AGG 0.501326 3_3:-41781172 Msa0452700:CDS
AATATGGATGAGTTTGGTAT+GGG 0.501931 3_3:-41783007 Msa0452700:CDS
TAAGCAGCTGAAGGAGCTGC+AGG 0.503173 3_3:+41779452 None:intergenic
GGAGGTGGGGTTCGGTCAGA+CGG 0.506358 3_3:+41783278 None:intergenic
GGGTGTTGGTGAGAAGGGAG+TGG 0.507696 3_3:+41783341 None:intergenic
AGGGTGCCAGGAGGATCATC+CGG 0.508700 3_3:-41781160 Msa0452700:CDS
CATTATAAGGAATAGCTTCA+AGG 0.510073 3_3:-41779507 Msa0452700:CDS
GGTGAGAAGGGAGTGGCGGA+GGG 0.510097 3_3:+41783348 None:intergenic
GCGGAGGGTGAGGATTTGAG+AGG 0.510822 3_3:+41783363 None:intergenic
TAAGCGATCGTTCTACATCT+TGG 0.510844 3_3:-41775836 Msa0452700:three_prime_UTR
CCTAGCTGGACTACCTGCCT+TGG 0.511239 3_3:-41778482 Msa0452700:CDS
GGTGGGGTTCGGTCAGACGG+AGG 0.514187 3_3:+41783281 None:intergenic
ATCATAGTAACCAGCTGAAA+GGG 0.518202 3_3:+41779863 None:intergenic
ATTCGTGAAACTATTGAAGA+TGG 0.519456 3_3:-41780574 Msa0452700:CDS
GAATAGCTTCAAGGAAGCGC+TGG 0.521105 3_3:-41779498 Msa0452700:CDS
TTGGAAAGTAAGCCCTTGAA+AGG 0.521290 3_3:-41780613 Msa0452700:CDS
GTGTGTGAGAGTAGCTTGGG+TGG 0.521382 3_3:+41783408 None:intergenic
CTCGACCGTAGAATCGCTGC+GGG 0.522696 3_3:-41783202 Msa0452700:CDS
TGTTAAGGATAATATTTGTA+CGG 0.523699 3_3:-41783143 Msa0452700:CDS
GCGAGGAGAGATTGGTCGGA+AGG 0.525327 3_3:+41783238 None:intergenic
TGGAGGAAGGAACGGAGGTG+GGG 0.527467 3_3:+41783265 None:intergenic
CCAATTCTCAGTCCTTTCAA+GGG 0.528903 3_3:+41780601 None:intergenic
AGGAGGATCATCCGGAGGAT+CGG 0.529125 3_3:-41781152 Msa0452700:CDS
ATATTACAAACGAGCGCAGC+AGG 0.530821 3_3:-41779838 Msa0452700:intron
GCTGACATGCCGTCGACTGG+TGG 0.531775 3_3:-41783121 Msa0452700:CDS
CTTGAGACGCGCCCATATGT+TGG 0.532165 3_3:+41781028 None:intergenic
CGTCTCAAGATTTGGACTCA+TGG 0.533310 3_3:-41781014 Msa0452700:CDS
GGGAAATCAAGATATCATAT+TGG 0.533729 3_3:+41779474 None:intergenic
AATGAGGTCGGTAGCGGAGA+GGG 0.535014 3_3:+41783321 None:intergenic
CGGAGGGTGAGGATTTGAGA+GGG 0.535379 3_3:+41783364 None:intergenic
ACGGCTGACATGCCGTCGAC+TGG 0.535541 3_3:-41783124 Msa0452700:CDS
GGATCGACTGGCCTTCCTGT+TGG 0.537162 3_3:-41778433 Msa0452700:CDS
AAGGGAGAAGCGTGAGAGAG+TGG 0.537183 3_3:+41783447 None:intergenic
ACCATCATAGCGAGACAAGT+TGG 0.538119 3_3:+41780284 None:intergenic
CGAGGAGAGATTGGTCGGAA+GGG 0.538386 3_3:+41783239 None:intergenic
TGCCGTCGACTGGTGGGTCG+AGG 0.539238 3_3:-41783114 Msa0452700:CDS
GTCGGTAGCGGAGAGGGTGT+TGG 0.539807 3_3:+41783327 None:intergenic
CATCATAGTAACCAGCTGAA+AGG 0.540452 3_3:+41779862 None:intergenic
TATCATGACCAGCAATTGCA+TGG 0.543365 3_3:+41780924 None:intergenic
TGTTGGTGAGAAGGGAGTGG+CGG 0.543948 3_3:+41783344 None:intergenic
AAGAGAGTTAAGGAGTTGGG+TGG 0.544145 3_3:-41783049 Msa0452700:CDS
TAGGTTTGAAGCCAACATAT+GGG 0.545372 3_3:-41781039 Msa0452700:CDS
CAGAACCTAACCCTTTGGCT+CGG 0.546221 3_3:+41780066 None:intergenic
TGGTGGAAGTGTGAGGCAGC+CGG 0.546383 3_3:-41781080 Msa0452700:CDS
GATCCTTTGGCTATGTATGC+TGG 0.549623 3_3:-41779323 Msa0452700:CDS
AGTTGAAAGAAGATATACTA+GGG 0.549706 3_3:+41783544 None:intergenic
GGCACCCTATTAACATCCCA+CGG 0.550526 3_3:+41781175 None:intergenic
AAGGGAGGTGGAGGAAGGAA+CGG 0.550801 3_3:+41783257 None:intergenic
AGAGAGTTAAGGAGTTGGGT+GGG 0.551590 3_3:-41783048 Msa0452700:CDS
TCACACTCACTCTAGAGTCT+AGG 0.552794 3_3:-41783512 Msa0452700:five_prime_UTR
TGATGCCACATCAAGTAAGC+AGG 0.552918 3_3:-41780897 Msa0452700:intron
CAGGCAATGTGTTGTATCGT+TGG 0.553276 3_3:-41781113 Msa0452700:CDS
CCACATGGTAAAACCAAGGC+AGG 0.555507 3_3:+41778469 None:intergenic
GTCGGAAGGGAGGTGGAGGA+AGG 0.557260 3_3:+41783252 None:intergenic
TATGGTGAATCCCGAGCCAA+AGG 0.561140 3_3:-41780077 Msa0452700:CDS
CCGCAGCGATTCTACGGTCG+AGG 0.563454 3_3:+41783203 None:intergenic
GATTGGTGCAGCATTTAATG+AGG 0.564316 3_3:-41778401 Msa0452700:intron
TTTATTGAGAATGGATCGAC+TGG 0.565848 3_3:-41778445 Msa0452700:CDS
ACGCCATCAGCTATGATTGG+TGG 0.566635 3_3:+41775872 None:intergenic
CCAAGGCAGGTAGTCCAGCT+AGG 0.568026 3_3:+41778482 None:intergenic
TATAGATTGATCAAGTGTAA+AGG 0.571333 3_3:-41775508 Msa0452700:three_prime_UTR
GTTCCACCAATCATAGCTGA+TGG 0.572843 3_3:-41775875 Msa0452700:CDS
TAGTTGAAAGAAGATATACT+AGG 0.574306 3_3:+41783543 None:intergenic
AGCCAAAGGGTTAGGTTCTG+AGG 0.574572 3_3:-41780063 Msa0452700:intron
TGGTGGGTCGAGGATACTTG+AGG 0.574780 3_3:-41783104 Msa0452700:CDS
GGTGATGGTGGATGATGGAA+GGG 0.575534 3_3:+41783429 None:intergenic
TCGGCCTCCATTTGATGCGA+CGG 0.576869 3_3:-41783077 Msa0452700:CDS
TCATACCTGCTTACTTGATG+TGG 0.577058 3_3:+41780892 None:intergenic
GGAGAGATTGGTCGGAAGGG+AGG 0.579060 3_3:+41783242 None:intergenic
GACGGCGGTGAAGAGAGTTA+AGG 0.579689 3_3:-41783059 Msa0452700:CDS
AGGGTGAGGATTTGAGAGGG+GGG 0.579792 3_3:+41783367 None:intergenic
TAGGGAGAGCTGCTGAGAGT+GGG 0.580834 3_3:-41775935 Msa0452700:CDS
GGATTGAATGAGGTCGGTAG+CGG 0.581115 3_3:+41783315 None:intergenic
AGGCAATGTGTTGTATCGTT+GGG 0.585368 3_3:-41781112 Msa0452700:CDS
AGCAGCTGAAGGAGCTGCAG+GGG 0.585773 3_3:+41779454 None:intergenic
CTGAAATGCAGAAGCTTCAG+TGG 0.585857 3_3:+41782979 None:intergenic
ACAACACCGCAAAATGATGC+CGG 0.586556 3_3:+41781061 None:intergenic
AGCGTGAGAGAGTGGAACGT+GGG 0.590701 3_3:+41783455 None:intergenic
GGTGAAGAGAGTTAAGGAGT+TGG 0.591063 3_3:-41783053 Msa0452700:CDS
GTAGGGAGAGCTGCTGAGAG+TGG 0.592088 3_3:-41775936 Msa0452700:intron
GGGTGAGGTGGGATTGAATG+AGG 0.593659 3_3:+41783305 None:intergenic
GCGTCATCACTTGATGCCAT+TGG 0.595721 3_3:-41780986 Msa0452700:CDS
GAGGTGGGATTGAATGAGGT+CGG 0.596851 3_3:+41783309 None:intergenic
GCTTTAATTGAGAATTCATG+AGG 0.596876 3_3:-41774148 Msa0452700:three_prime_UTR
GGTGGGTCGAGGATACTTGA+GGG 0.597676 3_3:-41783103 Msa0452700:CDS
AATAGGTGACTGCCAACCCG+TGG 0.597933 3_3:-41781192 Msa0452700:intron
CGAGGTCATGTGCCTGAGCG+AGG 0.598443 3_3:+41783221 None:intergenic
CCTATTAACATCCCACGGGT+TGG 0.601481 3_3:+41781180 None:intergenic
TTATCAGTTTCATGAAAATG+CGG 0.606283 3_3:-41775798 Msa0452700:three_prime_UTR
CTGAGCGAGGAGAGATTGGT+CGG 0.606794 3_3:+41783234 None:intergenic
ATCCTCGACCCACCAGTCGA+CGG 0.609093 3_3:+41783112 None:intergenic
TCATTTGCAGGCCAACAGGA+AGG 0.610270 3_3:+41778422 None:intergenic
GCAACAAGAACACCAGCAAG+AGG 0.610406 3_3:+41783166 None:intergenic
AAAGCGAGGACATAGTATGC+TGG 0.610724 3_3:+41780321 None:intergenic
AGATGAACCAAAGCAGCCAA+TGG 0.614909 3_3:+41780970 None:intergenic
CGACCGTAGAATCGCTGCGG+GGG 0.617202 3_3:-41783200 Msa0452700:CDS
AAGCAGCTGAAGGAGCTGCA+GGG 0.619430 3_3:+41779453 None:intergenic
GCACCCTATTAACATCCCAC+GGG 0.621175 3_3:+41781176 None:intergenic
ATGGTGAATCCCGAGCCAAA+GGG 0.624972 3_3:-41780076 Msa0452700:CDS
GCCTCCATTTGATGCGACGG+CGG 0.628308 3_3:-41783074 Msa0452700:CDS
ATATGGATGAGTTTGGTATG+GGG 0.631089 3_3:-41783006 Msa0452700:CDS
AAGCGTGAGAGAGTGGAACG+TGG 0.633684 3_3:+41783454 None:intergenic
CTGACATGCCGTCGACTGGT+GGG 0.633780 3_3:-41783120 Msa0452700:CDS
GGCAACCCAAGTGAAAAGGA+TGG 0.642277 3_3:+41780342 None:intergenic
ACCGCCGTCGCATCAAATGG+AGG 0.645246 3_3:+41783073 None:intergenic
TCAGTTTCATGAAAATGCGG+TGG 0.646417 3_3:-41775795 Msa0452700:three_prime_UTR
ATTAGGATGCTCTGTGAACG+AGG 0.648039 3_3:-41780497 Msa0452700:intron
CCATTCTCAATAAATCCACA+TGG 0.649598 3_3:+41778454 None:intergenic
TCACCAGCATACATAGCCAA+AGG 0.651194 3_3:+41779320 None:intergenic
ATAGGTGACTGCCAACCCGT+GGG 0.663939 3_3:-41781191 Msa0452700:intron
AAGATGATTCAGACAAAGCG+AGG 0.664996 3_3:+41780307 None:intergenic
GAATGAGGTCGGTAGCGGAG+AGG 0.669174 3_3:+41783320 None:intergenic
AAATCCACATGGTAAAACCA+AGG 0.672604 3_3:+41778465 None:intergenic
CTGATGGCGTTGAATAACGA+GGG 0.678961 3_3:-41775859 Msa0452700:exon
GCGTGAGAGAGTGGAACGTG+GGG 0.681489 3_3:+41783456 None:intergenic
GCTGATGGCGTTGAATAACG+AGG 0.685403 3_3:-41775860 Msa0452700:exon
CCTCGACCGTAGAATCGCTG+CGG 0.687794 3_3:-41783203 Msa0452700:CDS
GTGATACTGGTGGAAGTGTG+AGG 0.689164 3_3:-41781087 Msa0452700:CDS
GTGCCAGGAGGATCATCCGG+AGG 0.699333 3_3:-41781157 Msa0452700:CDS
CATGACCAGCAATTGCATGG+AGG 0.725633 3_3:+41780927 None:intergenic
TCGACCGTAGAATCGCTGCG+GGG 0.729315 3_3:-41783201 Msa0452700:CDS
GATGTTAATAGGGTGCCAGG+AGG 0.756629 3_3:-41781169 Msa0452700:CDS
TCGTTGGGAAGTGATACTGG+TGG 0.795744 3_3:-41781097 Msa0452700:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAATACAACATAAATAT+TGG - chr3_3:41778910-41778929 Msa0452700:intron 10.0%
!! ATATACAAAAAAATATTCTA+GGG + chr3_3:41779772-41779791 None:intergenic 10.0%
!!! CAATTTTATTTTATTTTTGA+AGG + chr3_3:41782423-41782442 None:intergenic 10.0%
!!! TTTGATTTTTATTTTATATC+CGG - chr3_3:41782590-41782609 Msa0452700:intron 10.0%
!! TTATTATTATAACAAACTTA+AGG + chr3_3:41782658-41782677 None:intergenic 10.0%
!!! TTAAAAAAATTTAAGATCAT+GGG + chr3_3:41783430-41783449 None:intergenic 10.0%
!!! ATTAAAAAAATTTAAGATCA+TGG + chr3_3:41783431-41783450 None:intergenic 10.0%
!! TTAATAATATAAGATCAATA+AGG + chr3_3:41783603-41783622 None:intergenic 10.0%
!!! ACTAATTTTTTTTTTTTGTC+AGG + chr3_3:41774079-41774098 None:intergenic 15.0%
!!! GTTAGTTTTTTTTTTTTGTT+TGG - chr3_3:41774858-41774877 Msa0452700:intron 15.0%
!! TTTGCAATTTCAATAAATTT+AGG - chr3_3:41775091-41775110 Msa0452700:intron 15.0%
!! TTGCAATTTCAATAAATTTA+GGG - chr3_3:41775092-41775111 Msa0452700:intron 15.0%
!! TTTCAAATATTTATAATGTC+AGG - chr3_3:41775533-41775552 Msa0452700:intron 15.0%
!! TTCAAATATTTATAATGTCA+GGG - chr3_3:41775534-41775553 Msa0452700:intron 15.0%
!!! GGTTTTTTTTTTTTTTTATC+CGG - chr3_3:41775657-41775676 Msa0452700:three_prime_UTR 15.0%
!! ATTGTTAAAAGGTAATTAAT+TGG + chr3_3:41776964-41776983 None:intergenic 15.0%
!!! TTCTATTTTTAATACATTTC+AGG - chr3_3:41777749-41777768 Msa0452700:intron 15.0%
!!! ACTTTATTTTATGTTTTTCT+TGG - chr3_3:41777858-41777877 Msa0452700:intron 15.0%
!!! TTTCATTTATTTTAGAAGTT+TGG - chr3_3:41778090-41778109 Msa0452700:intron 15.0%
!!! TTCATTTATTTTAGAAGTTT+GGG - chr3_3:41778091-41778110 Msa0452700:intron 15.0%
!! TGATTAATTAAGATATTTCT+TGG + chr3_3:41778677-41778696 None:intergenic 15.0%
!! CATATACAAAAAAATATTCT+AGG + chr3_3:41779773-41779792 None:intergenic 15.0%
!!! AGTTGATATACAATAAATAA+GGG + chr3_3:41780091-41780110 None:intergenic 15.0%
!!! TAGTTGATATACAATAAATA+AGG + chr3_3:41780092-41780111 None:intergenic 15.0%
!!! ATTAATTACACTAATTTTCA+AGG + chr3_3:41780187-41780206 None:intergenic 15.0%
!!! TATAGATGCTAAATTATTTT+AGG + chr3_3:41781625-41781644 None:intergenic 15.0%
!!! TTTAGTAAGTAAAAAACTTT+TGG - chr3_3:41782241-41782260 Msa0452700:intron 15.0%
!!! AAAAATATTTGAAATTCTAC+CGG - chr3_3:41782278-41782297 Msa0452700:intron 15.0%
!!! TATCATTTTAACAAACTTAA+GGG + chr3_3:41782717-41782736 None:intergenic 15.0%
!!! TTATCATTTTAACAAACTTA+AGG + chr3_3:41782718-41782737 None:intergenic 15.0%
!! AAATAAACCGTTAAATAAAA+CGG + chr3_3:41783106-41783125 None:intergenic 15.0%
!!! AACTTTTTAGTTTTTTATGA+TGG - chr3_3:41783476-41783495 Msa0452700:CDS 15.0%
!! TGTTAAGGATAATATTTGTA+CGG - chr3_3:41774522-41774541 Msa0452700:intron 20.0%
!! TTAAAGTGAATATTAATCTC+AGG - chr3_3:41774806-41774825 Msa0452700:intron 20.0%
!!! CTAATTTGACAGTAATTTTA+AGG + chr3_3:41775057-41775076 None:intergenic 20.0%
!! CTTAAAATTACTGTCAAATT+AGG - chr3_3:41775055-41775074 Msa0452700:intron 20.0%
!! ATGGTAAGTTGTTAAAATAT+AGG - chr3_3:41775444-41775463 Msa0452700:intron 20.0%
!! TGGTAAGTTGTTAAAATATA+GGG - chr3_3:41775445-41775464 Msa0452700:intron 20.0%
!! ATTTGAAAGTTTAATAGAGT+CGG - chr3_3:41775504-41775523 Msa0452700:three_prime_UTR 20.0%
!! AGCAAAAAAAGAATATGAAA+TGG + chr3_3:41775614-41775633 None:intergenic 20.0%
!! TCTAAAAGTTCAAAAAACAA+GGG + chr3_3:41775790-41775809 None:intergenic 20.0%
!! ATCTAAAAGTTCAAAAAACA+AGG + chr3_3:41775791-41775810 None:intergenic 20.0%
!! ATTACAAAACATACAAAAAG+TGG - chr3_3:41776319-41776338 Msa0452700:intron 20.0%
!! TTACAAAACATACAAAAAGT+GGG - chr3_3:41776320-41776339 Msa0452700:intron 20.0%
!!! CTTTTTTTCATTATTAGCAA+TGG - chr3_3:41776833-41776852 Msa0452700:intron 20.0%
!!! AATTAATTGGCTTAATAACA+AGG + chr3_3:41776951-41776970 None:intergenic 20.0%
!! TCAAAATGAGATAGAAAATT+GGG + chr3_3:41777019-41777038 None:intergenic 20.0%
!! ACAAAATAAAACATTGTGTT+CGG + chr3_3:41777468-41777487 None:intergenic 20.0%
!!! TCATTGATAATCATTTTGTT+TGG - chr3_3:41777499-41777518 Msa0452700:intron 20.0%
!! ATCCTTCTTAATTTCAAATT+TGG - chr3_3:41777638-41777657 Msa0452700:intron 20.0%
!! AATACCAATGCATATAAAAT+TGG + chr3_3:41777718-41777737 None:intergenic 20.0%
!!! TTATTTTATGTTTTTCTTGG+TGG - chr3_3:41777861-41777880 Msa0452700:intron 20.0%
!!! TATTTTATGTTTTTCTTGGT+GGG - chr3_3:41777862-41777881 Msa0452700:intron 20.0%
!! AAGTATTTCATTCTTCTTAT+TGG - chr3_3:41778380-41778399 Msa0452700:intron 20.0%
!! TTAACAACATATAATGAGAT+CGG + chr3_3:41778434-41778453 None:intergenic 20.0%
!!! TGAATCAAGTTTAATTTCAA+TGG + chr3_3:41778551-41778570 None:intergenic 20.0%
!! ATTGTATAGGATTATTGTTT+AGG + chr3_3:41778978-41778997 None:intergenic 20.0%
!!! TAATGTTTGCTTTTCTTTAT+TGG - chr3_3:41779131-41779150 Msa0452700:intron 20.0%
!!! TTTTTAAAGAGCATTAAAGA+GGG - chr3_3:41779376-41779395 Msa0452700:intron 20.0%
!!! ATCTTTAAGAAAATATTCTC+AGG + chr3_3:41779534-41779553 None:intergenic 20.0%
!! TTAAAGAGCAAATAATCTTT+AGG + chr3_3:41779872-41779891 None:intergenic 20.0%
!! ATTTGAAGATGATTAAACAA+AGG - chr3_3:41779891-41779910 Msa0452700:CDS 20.0%
!! AAATGAGATAGTTGTATAAA+AGG - chr3_3:41779975-41779994 Msa0452700:intron 20.0%
!! CTCAATGAAATGTAAAATTT+AGG + chr3_3:41780346-41780365 None:intergenic 20.0%
!!! CATTTGATAACTTTTAATCT+TGG + chr3_3:41781507-41781526 None:intergenic 20.0%
!! CAAGATTAAAAGTTATCAAA+TGG - chr3_3:41781505-41781524 Msa0452700:intron 20.0%
!! AATTGTGATCATTTCAAAAA+AGG + chr3_3:41782084-41782103 None:intergenic 20.0%
!!! TTTTTGAAATGATCACAATT+TGG - chr3_3:41782084-41782103 Msa0452700:intron 20.0%
!!! ATGGATTGTTCATATTTTAA+TGG - chr3_3:41782303-41782322 Msa0452700:intron 20.0%
!! TAAATTGAACAAAGATACAT+GGG + chr3_3:41783377-41783396 None:intergenic 20.0%
!! TTAAATTGAACAAAGATACA+TGG + chr3_3:41783378-41783397 None:intergenic 20.0%
!! AAAGCTAAAATCTATCAAAA+GGG + chr3_3:41783502-41783521 None:intergenic 20.0%
!! TAAAGCTAAAATCTATCAAA+AGG + chr3_3:41783503-41783522 None:intergenic 20.0%
! AGTTGAAAGAAGATATACTA+GGG + chr3_3:41774124-41774143 None:intergenic 25.0%
! TAGTTGAAAGAAGATATACT+AGG + chr3_3:41774125-41774144 None:intergenic 25.0%
! ATAGTTCAACGTTTCAAATA+AGG + chr3_3:41774776-41774795 None:intergenic 25.0%
! ACTAATAAAAAATGCACTTG+TGG + chr3_3:41774961-41774980 None:intergenic 25.0%
!!! TCTTTGAATGTGTTTTTACT+TGG - chr3_3:41775021-41775040 Msa0452700:intron 25.0%
! GATTATGAGTGTTTGAAAAA+AGG - chr3_3:41775326-41775345 Msa0452700:intron 25.0%
! TTATATCTTCTGAGTATGTT+AGG - chr3_3:41775379-41775398 Msa0452700:intron 25.0%
! TATATCTTCTGAGTATGTTA+GGG - chr3_3:41775380-41775399 Msa0452700:intron 25.0%
! AAATGTAGGGAATAAATTGA+TGG - chr3_3:41775425-41775444 Msa0452700:intron 25.0%
! ATAGCAAGTGGTTAAATAAA+GGG - chr3_3:41775477-41775496 Msa0452700:intron 25.0%
! ATTCTTAGATACATTAGTGT+GGG - chr3_3:41775848-41775867 Msa0452700:exon 25.0%
! TTACTACTAACATTACAAAC+TGG + chr3_3:41776006-41776025 None:intergenic 25.0%
! TTGAATTAAATTTGTGAGCA+TGG - chr3_3:41776090-41776109 Msa0452700:intron 25.0%
! TGAATTAAATTTGTGAGCAT+GGG - chr3_3:41776091-41776110 Msa0452700:intron 25.0%
! GAAGAATGAAAATTGCAAAT+CGG - chr3_3:41776142-41776161 Msa0452700:intron 25.0%
! TCTCTACGTCTTAAATATAA+TGG + chr3_3:41776207-41776226 None:intergenic 25.0%
! TACAAAACATACAAAAAGTG+GGG - chr3_3:41776321-41776340 Msa0452700:intron 25.0%
! AACATATCTCAGTTATCAAT+GGG + chr3_3:41776427-41776446 None:intergenic 25.0%
! AAACATATCTCAGTTATCAA+TGG + chr3_3:41776428-41776447 None:intergenic 25.0%
! GATGCATATGTTAATTCAAT+AGG - chr3_3:41776456-41776475 Msa0452700:intron 25.0%
!! AACAACATTTTTACCAAACA+TGG + chr3_3:41776807-41776826 None:intergenic 25.0%
! GTTAGCTATTCATTGTTAAA+AGG + chr3_3:41776975-41776994 None:intergenic 25.0%
! AGCTAACAATGTAATTTATC+AGG - chr3_3:41776988-41777007 Msa0452700:intron 25.0%
! TAACAATGTAATTTATCAGG+AGG - chr3_3:41776991-41777010 Msa0452700:intron 25.0%
! GTCAAAATGAGATAGAAAAT+TGG + chr3_3:41777020-41777039 None:intergenic 25.0%
! AGTTATAGAGAAAAATGAAG+TGG + chr3_3:41777198-41777217 None:intergenic 25.0%
!!! ATAATCATTTTGTTTGGCTT+GGG - chr3_3:41777505-41777524 Msa0452700:intron 25.0%
! TGAAATTAAGAAGGATTGAA+AGG + chr3_3:41777634-41777653 None:intergenic 25.0%
!! AGCCAAATTTGAAATTAAGA+AGG + chr3_3:41777643-41777662 None:intergenic 25.0%
!! TTGGATCAATTCTTTTATAC+AGG + chr3_3:41777699-41777718 None:intergenic 25.0%
!! TGATCCAATTTTATATGCAT+TGG - chr3_3:41777711-41777730 Msa0452700:intron 25.0%
!!! GTGAAAATGAGAATTTTGAT+GGG - chr3_3:41777771-41777790 Msa0452700:intron 25.0%
!!! TGAAAATGAGAATTTTGATG+GGG - chr3_3:41777772-41777791 Msa0452700:intron 25.0%
! TGACTGAATTCATTATCATT+GGG + chr3_3:41777915-41777934 None:intergenic 25.0%
! TGAAAAGAAAAATGATCCTT+TGG - chr3_3:41778329-41778348 Msa0452700:intron 25.0%
! GATTGAATATATACCATCTA+AGG + chr3_3:41778646-41778665 None:intergenic 25.0%
! CTTAATTAATCAATAACTGC+CGG - chr3_3:41778685-41778704 Msa0452700:intron 25.0%
! TTAATTAATCAATAACTGCC+GGG - chr3_3:41778686-41778705 Msa0452700:intron 25.0%
! TATATACTTGACACATGTTA+AGG + chr3_3:41778730-41778749 None:intergenic 25.0%
! TGTTGAATTAGAGAAAATAG+AGG - chr3_3:41778827-41778846 Msa0452700:intron 25.0%
! CGTCTCTATATTTATTGTAT+AGG + chr3_3:41778991-41779010 None:intergenic 25.0%
!!! TTGGTGGTTTTTCTTTTTAT+AGG - chr3_3:41779150-41779169 Msa0452700:intron 25.0%
!! CTCTTTAATGCTCTTTAAAA+AGG + chr3_3:41779377-41779396 None:intergenic 25.0%
!!! CTTTTTAAAGAGCATTAAAG+AGG - chr3_3:41779375-41779394 Msa0452700:intron 25.0%
!! CACAATTTTTAAACTCTCTT+TGG + chr3_3:41779491-41779510 None:intergenic 25.0%
! GAGAGTTTAAAAATTGTGTT+TGG - chr3_3:41779493-41779512 Msa0452700:CDS 25.0%
!!! ACATATTGGTTTATAAACGT+GGG - chr3_3:41779602-41779621 Msa0452700:intron 25.0%
! TTTAGTTGAAAAAAGTTACC+AGG - chr3_3:41779735-41779754 Msa0452700:intron 25.0%
! GAATTATTTATTCCCATCTT+TGG + chr3_3:41779800-41779819 None:intergenic 25.0%
!!! AAATTCTTTAGAACGTAACA+TGG + chr3_3:41779935-41779954 None:intergenic 25.0%
! TATACAACTATCTCATTTGA+TGG + chr3_3:41779973-41779992 None:intergenic 25.0%
! TAAACAACAAACAATATGAG+AGG - chr3_3:41780234-41780253 Msa0452700:intron 25.0%
! AAACAACAAACAATATGAGA+GGG - chr3_3:41780235-41780254 Msa0452700:intron 25.0%
!! ATTTTACATTTCATTGAGCA+TGG - chr3_3:41780348-41780367 Msa0452700:CDS 25.0%
! AAAGATTCTATCACAAAAGT+TGG + chr3_3:41780384-41780403 None:intergenic 25.0%
! TTTGTGATAGAATCTTTCTA+TGG - chr3_3:41780387-41780406 Msa0452700:intron 25.0%
! ATTCTCATGTATAAAGATGA+GGG + chr3_3:41780546-41780565 None:intergenic 25.0%
! AATTCTCATGTATAAAGATG+AGG + chr3_3:41780547-41780566 None:intergenic 25.0%
! TTGTACTAACAGTTACTAAT+AGG - chr3_3:41780614-41780633 Msa0452700:CDS 25.0%
! TTCTTATAATACGAGATATC+AGG + chr3_3:41780809-41780828 None:intergenic 25.0%
! ACAAATAAGAGGAATTAAGA+GGG + chr3_3:41780909-41780928 None:intergenic 25.0%
! TACAAATAAGAGGAATTAAG+AGG + chr3_3:41780910-41780929 None:intergenic 25.0%
!! TCTTAATTCCTCTTATTTGT+AGG - chr3_3:41780909-41780928 Msa0452700:CDS 25.0%
! TGAGATAATTGGAAGAAATT+TGG + chr3_3:41780943-41780962 None:intergenic 25.0%
! GGAATTTCAATCAAAATGTT+AGG + chr3_3:41781008-41781027 None:intergenic 25.0%
! AAAGATTAGACACATTCAAA+AGG - chr3_3:41781087-41781106 Msa0452700:CDS 25.0%
!!! TAGCTCGGTTTATTTTTTTT+TGG - chr3_3:41781196-41781215 Msa0452700:intron 25.0%
!!! AGCTCGGTTTATTTTTTTTT+GGG - chr3_3:41781197-41781216 Msa0452700:intron 25.0%
! GTAATCTCTTAAGTTCATAA+AGG - chr3_3:41781260-41781279 Msa0452700:intron 25.0%
! AACATGAAAGTTTAGCAAAT+AGG + chr3_3:41781416-41781435 None:intergenic 25.0%
! TATCTAATATACGTCTTTCT+TGG - chr3_3:41781572-41781591 Msa0452700:intron 25.0%
! ATCTAATATACGTCTTTCTT+GGG - chr3_3:41781573-41781592 Msa0452700:intron 25.0%
! TGAAACTGATAAATTGTGTA+TGG + chr3_3:41781859-41781878 None:intergenic 25.0%
! TTATCAGTTTCATGAAAATG+CGG - chr3_3:41781867-41781886 Msa0452700:intron 25.0%
! TACCAAATAGAAGGAAAATT+TGG - chr3_3:41781924-41781943 Msa0452700:intron 25.0%
!! AACCAAATTTTCCTTCTATT+TGG + chr3_3:41781929-41781948 None:intergenic 25.0%
! TATAGATTGATCAAGTGTAA+AGG - chr3_3:41782157-41782176 Msa0452700:intron 25.0%
! ATAACAATACTAGAATCAAG+AGG - chr3_3:41782510-41782529 Msa0452700:intron 25.0%
! ATCATCTAAACCAAATTGAA+TGG - chr3_3:41782565-41782584 Msa0452700:intron 25.0%
! AAATCAAATGCCATTCAATT+TGG + chr3_3:41782578-41782597 None:intergenic 25.0%
!! TTTGACAAACATGATAATGA+TGG - chr3_3:41782756-41782775 Msa0452700:intron 25.0%
!! TACTATTTTATGGCAAACTT+AGG + chr3_3:41782954-41782973 None:intergenic 25.0%
!! TAGCGTGATTTACTATTTTA+TGG + chr3_3:41782964-41782983 None:intergenic 25.0%
!!! AGCATTTCCGTTTTATTTAA+CGG - chr3_3:41783096-41783115 Msa0452700:CDS 25.0%
AAGACAAATATGGATGAGTT+TGG - chr3_3:41774652-41774671 Msa0452700:intron 30.0%
AAATATGGATGAGTTTGGTA+TGG - chr3_3:41774657-41774676 Msa0452700:intron 30.0%
AATATGGATGAGTTTGGTAT+GGG - chr3_3:41774658-41774677 Msa0452700:intron 30.0%
ATAGTAAGCGGTTAAATGTA+GGG - chr3_3:41775412-41775431 Msa0452700:intron 30.0%
!! TTAACCACTTGCTATCAATT+AGG + chr3_3:41775472-41775491 None:intergenic 30.0%
GATAGCAAGTGGTTAAATAA+AGG - chr3_3:41775476-41775495 Msa0452700:intron 30.0%
ACAAACAAACAAACAACTAC+CGG + chr3_3:41775679-41775698 None:intergenic 30.0%
!!! TGTGTTTTTGTTTTCCAGTT+TGG - chr3_3:41775724-41775743 Msa0452700:three_prime_UTR 30.0%
!!! GTGTTTTTGTTTTCCAGTTT+GGG - chr3_3:41775725-41775744 Msa0452700:three_prime_UTR 30.0%
GATTCTTAGATACATTAGTG+TGG - chr3_3:41775847-41775866 Msa0452700:exon 30.0%
TTCTTAGATACATTAGTGTG+GGG - chr3_3:41775849-41775868 Msa0452700:exon 30.0%
! ATGATGTTTGATGATCCATT+TGG - chr3_3:41775891-41775910 Msa0452700:CDS 30.0%
TGTTAGTAGTAAATGTGAGA+AGG - chr3_3:41776014-41776033 Msa0452700:intron 30.0%
! TTTTCTCTCCAAATAAATGC+TGG + chr3_3:41776119-41776138 None:intergenic 30.0%
! ATATCCTACAGTTGCTTTAT+GGG - chr3_3:41776165-41776184 Msa0452700:intron 30.0%
TAACTGAGATATGTTTACTC+AGG - chr3_3:41776432-41776451 Msa0452700:intron 30.0%
! TATGAGTTTTTCACCATGTT+TGG - chr3_3:41776791-41776810 Msa0452700:intron 30.0%
GGCTCTTTGTTAAATATGAA+GGG - chr3_3:41776886-41776905 Msa0452700:intron 30.0%
!! TTTTGACTATGCAAGTTCTT+TGG - chr3_3:41777033-41777052 Msa0452700:intron 30.0%
ATTCGTGAAACTATTGAAGA+TGG - chr3_3:41777091-41777110 Msa0452700:intron 30.0%
TATAGAGAAAAATGAAGTGG+AGG + chr3_3:41777195-41777214 None:intergenic 30.0%
! AGTTAATGGACAGATGAAAA+GGG + chr3_3:41777289-41777308 None:intergenic 30.0%
! AAGTTAATGGACAGATGAAA+AGG + chr3_3:41777290-41777309 None:intergenic 30.0%
!! GATAATCATTTTGTTTGGCT+TGG - chr3_3:41777504-41777523 Msa0452700:intron 30.0%
ATATCTAGATATAGAGAAGG+TGG + chr3_3:41777532-41777551 None:intergenic 30.0%
ACCTTCTCTATATCTAGATA+TGG - chr3_3:41777531-41777550 Msa0452700:intron 30.0%
TCCATATCTAGATATAGAGA+AGG + chr3_3:41777535-41777554 None:intergenic 30.0%
! GGTGAAAATGAGAATTTTGA+TGG - chr3_3:41777770-41777789 Msa0452700:intron 30.0%
GTGACTGAATTCATTATCAT+TGG + chr3_3:41777916-41777935 None:intergenic 30.0%
! ATGATAATGAATTCAGTCAC+AGG - chr3_3:41777916-41777935 Msa0452700:intron 30.0%
TTACATAGAACACGCATAAA+AGG + chr3_3:41778127-41778146 None:intergenic 30.0%
CTTGAAGCTATTCCTTATAA+TGG + chr3_3:41778160-41778179 None:intergenic 30.0%
CATTATAAGGAATAGCTTCA+AGG - chr3_3:41778158-41778177 Msa0452700:intron 30.0%
GGGAAATCAAGATATCATAT+TGG + chr3_3:41778194-41778213 None:intergenic 30.0%
CTAACATGCAATAATGCAAA+AGG + chr3_3:41778267-41778286 None:intergenic 30.0%
AAGAGAACGATTACAATTAC+AGG + chr3_3:41778292-41778311 None:intergenic 30.0%
! AGACAAATAGTGTTAGTTTG+AGG - chr3_3:41778497-41778516 Msa0452700:intron 30.0%
! AATAGTGTTAGTTTGAGGTT+TGG - chr3_3:41778502-41778521 Msa0452700:intron 30.0%
! CAGCAGAGTCAATTTTATAT+AGG - chr3_3:41778879-41778898 Msa0452700:intron 30.0%
AGAAAAGCAAACATTATGCT+CGG + chr3_3:41779127-41779146 None:intergenic 30.0%
!! TGTTTGCTTTTCTTTATTGG+TGG - chr3_3:41779134-41779153 Msa0452700:intron 30.0%
AATTCATGTGTGATATTCCA+GGG + chr3_3:41779463-41779482 None:intergenic 30.0%
AAATTCATGTGTGATATTCC+AGG + chr3_3:41779464-41779483 None:intergenic 30.0%
!! AATTGTGTTTGGTTGATGAT+TGG - chr3_3:41779504-41779523 Msa0452700:CDS 30.0%
! TCGTCTAGTTTACATGATAA+GGG + chr3_3:41779577-41779596 None:intergenic 30.0%
!! CACATATTGGTTTATAAACG+TGG - chr3_3:41779601-41779620 Msa0452700:intron 30.0%
!! AATGGCCTTTTAAGAAACAA+AGG - chr3_3:41779652-41779671 Msa0452700:intron 30.0%
! GACTTCCTTTGTTTCTTAAA+AGG + chr3_3:41779660-41779679 None:intergenic 30.0%
TCTAGGGAATAAATTATTCC+TGG + chr3_3:41779756-41779775 None:intergenic 30.0%
TTGTATATGTCTACCAAAGA+TGG - chr3_3:41779784-41779803 Msa0452700:intron 30.0%
TGTATATGTCTACCAAAGAT+GGG - chr3_3:41779785-41779804 Msa0452700:intron 30.0%
AAGAGCAAATAATCTTTAGG+AGG + chr3_3:41779869-41779888 None:intergenic 30.0%
ACAGTTAATAGGAGACAAAT+GGG + chr3_3:41780004-41780023 None:intergenic 30.0%
TTCCAAACAAGACAGTTAAT+AGG + chr3_3:41780015-41780034 None:intergenic 30.0%
TCGAATGACTAATGATTATG+GGG + chr3_3:41780115-41780134 None:intergenic 30.0%
GTCGAATGACTAATGATTAT+GGG + chr3_3:41780116-41780135 None:intergenic 30.0%
TGTCGAATGACTAATGATTA+TGG + chr3_3:41780117-41780136 None:intergenic 30.0%
TTCTATCTCCTTTCTTTCTT+GGG - chr3_3:41780298-41780317 Msa0452700:CDS 30.0%
TTCTCATGTATAAAGATGAG+GGG + chr3_3:41780545-41780564 None:intergenic 30.0%
TTATAATACGAGATATCAGG+TGG + chr3_3:41780806-41780825 None:intergenic 30.0%
CAACATCTTTCTGTAATTGA+GGG + chr3_3:41780845-41780864 None:intergenic 30.0%
AAGTATATAGTCCTTTGGTT+GGG + chr3_3:41780884-41780903 None:intergenic 30.0%
GTTAGTTGGATTGAGATAAT+TGG + chr3_3:41780954-41780973 None:intergenic 30.0%
CAAAAGGAAATAGTAAAGAG+AGG - chr3_3:41781103-41781122 Msa0452700:CDS 30.0%
!!! TTTTTTTTGGGCTAAAAGAG+AGG - chr3_3:41781209-41781228 Msa0452700:intron 30.0%
ATGAACTTAAGAGATTACCA+GGG + chr3_3:41781258-41781277 None:intergenic 30.0%
TATGAACTTAAGAGATTACC+AGG + chr3_3:41781259-41781278 None:intergenic 30.0%
TGAACAATAGAATCATCCTT+TGG - chr3_3:41781692-41781711 Msa0452700:intron 30.0%
ACAAATAAATTCCAAGCCAA+AGG + chr3_3:41781711-41781730 None:intergenic 30.0%
!! TTGGCTTGGAATTTATTTGT+AGG - chr3_3:41781711-41781730 Msa0452700:intron 30.0%
! TGGCTTGGAATTTATTTGTA+GGG - chr3_3:41781712-41781731 Msa0452700:intron 30.0%
GAAAATTTGGTTGACATTAC+AGG - chr3_3:41781937-41781956 Msa0452700:intron 30.0%
! GACATTACAGGCAAATATTT+TGG - chr3_3:41781949-41781968 Msa0452700:intron 30.0%
TCGGAACTTAACAAATAAGT+TGG - chr3_3:41782192-41782211 Msa0452700:intron 30.0%
ATCCTCAACAGTAAATTACA+AGG + chr3_3:41782218-41782237 None:intergenic 30.0%
AAATATGAACAATCCATAGC+CGG + chr3_3:41782300-41782319 None:intergenic 30.0%
TTCACTTGATCAGAATTTGT+AGG - chr3_3:41782390-41782409 Msa0452700:intron 30.0%
TCACTTGATCAGAATTTGTA+GGG - chr3_3:41782391-41782410 Msa0452700:intron 30.0%
! TAACAAACTTAAGGTGTTTG+TGG + chr3_3:41782649-41782668 None:intergenic 30.0%
! ACTTGTAACTAGTCTACTAA+TGG - chr3_3:41782838-41782857 Msa0452700:intron 30.0%
!! CTTTTTCTGAAGGTGATTAA+CGG + chr3_3:41783198-41783217 None:intergenic 30.0%
GCTTTAATTGAGAATTCATG+AGG - chr3_3:41783517-41783536 Msa0452700:five_prime_UTR 30.0%
!!! TTTTTTGTCAGGTAGCTTAG+TGG + chr3_3:41774068-41774087 None:intergenic 35.0%
TGTTGTTGGGAAGACAAATA+TGG - chr3_3:41774642-41774661 Msa0452700:intron 35.0%
ATATGGATGAGTTTGGTATG+GGG - chr3_3:41774659-41774678 Msa0452700:intron 35.0%
ACTTTCAAGGACGTAAATTG+TGG + chr3_3:41774888-41774907 None:intergenic 35.0%
GACAGCAAGTTATACTTTCA+AGG + chr3_3:41774901-41774920 None:intergenic 35.0%
!! AGTATAACTTGCTGTCTCAT+TGG - chr3_3:41774905-41774924 Msa0452700:intron 35.0%
!! TAGTCCTCAAGTCTGTTTTT+AGG - chr3_3:41774986-41775005 Msa0452700:intron 35.0%
ACAACCTAAAAACAGACTTG+AGG + chr3_3:41774993-41775012 None:intergenic 35.0%
TTACTGTCAAATTAGGTGCT+AGG - chr3_3:41775062-41775081 Msa0452700:intron 35.0%
TACTGTCAAATTAGGTGCTA+GGG - chr3_3:41775063-41775082 Msa0452700:intron 35.0%
! GGGACTAAATTGATAGTAAG+CGG - chr3_3:41775400-41775419 Msa0452700:intron 35.0%
GATAGTAAGCGGTTAAATGT+AGG - chr3_3:41775411-41775430 Msa0452700:intron 35.0%
! GTTGTAGTGCATTTCTGTTT+TGG - chr3_3:41775636-41775655 Msa0452700:three_prime_UTR 35.0%
!!! TTTTTGTTTTCCAGTTTGGG+TGG - chr3_3:41775728-41775747 Msa0452700:three_prime_UTR 35.0%
AAAGAATAGTGTCGTATGCT+AGG - chr3_3:41775944-41775963 Msa0452700:intron 35.0%
! CTGGACATTTGAAATTTGAG+AGG + chr3_3:41775987-41776006 None:intergenic 35.0%
TAAATGTGAGAAGGTTTGAG+TGG - chr3_3:41776023-41776042 Msa0452700:intron 35.0%
! GATATCCTACAGTTGCTTTA+TGG - chr3_3:41776164-41776183 Msa0452700:intron 35.0%
! TATCCTACAGTTGCTTTATG+GGG - chr3_3:41776166-41776185 Msa0452700:intron 35.0%
! TAGGTTTGAAGCCAACATAT+GGG - chr3_3:41776626-41776645 Msa0452700:intron 35.0%
GACAATGTTTGGTATAGTCT+CGG - chr3_3:41776864-41776883 Msa0452700:intron 35.0%
ACAATGTTTGGTATAGTCTC+GGG - chr3_3:41776865-41776884 Msa0452700:intron 35.0%
GGGCTCTTTGTTAAATATGA+AGG - chr3_3:41776885-41776904 Msa0452700:intron 35.0%
TCATCTGTCCATTAACTTAC+AGG - chr3_3:41777292-41777311 Msa0452700:intron 35.0%
!! TATGCATTGGTATTTTGAGC+TGG - chr3_3:41777724-41777743 Msa0452700:intron 35.0%
ATCATAGTAACCAGCTGAAA+GGG + chr3_3:41777805-41777824 None:intergenic 35.0%
CTAAAAGACACGTAAAGAAC+AGG + chr3_3:41778017-41778036 None:intergenic 35.0%
AAACTCTTGCTTCATTTCCT+AGG - chr3_3:41778046-41778065 Msa0452700:intron 35.0%
! TTAGAAGTTTGGGATCTACT+AGG - chr3_3:41778101-41778120 Msa0452700:intron 35.0%
TTATGCGTGTTCTATGTAAC+AGG - chr3_3:41778128-41778147 Msa0452700:intron 35.0%
AACAGGTGAGAACCATTATA+AGG - chr3_3:41778145-41778164 Msa0452700:intron 35.0%
! CCAATTTTATAAGCAGCTGA+AGG + chr3_3:41778225-41778244 None:intergenic 35.0%
CCTTCAGCTGCTTATAAAAT+TGG - chr3_3:41778222-41778241 Msa0452700:intron 35.0%
TCTCTTTCTTTGACATTTGC+AGG - chr3_3:41778306-41778325 Msa0452700:intron 35.0%
! GACTTCTAGTTACTCCATAA+AGG - chr3_3:41778765-41778784 Msa0452700:intron 35.0%
ATCAAACTCTCTAAACCACT+GGG + chr3_3:41779052-41779071 None:intergenic 35.0%
AAATCCACATGGTAAAACCA+AGG + chr3_3:41779203-41779222 None:intergenic 35.0%
CCATTCTCAATAAATCCACA+TGG + chr3_3:41779214-41779233 None:intergenic 35.0%
CCATGTGGATTTATTGAGAA+TGG - chr3_3:41779211-41779230 Msa0452700:intron 35.0%
TTTATTGAGAATGGATCGAC+TGG - chr3_3:41779220-41779239 Msa0452700:intron 35.0%
TACACTAAACTTCGTGTTGA+CGG - chr3_3:41779307-41779326 Msa0452700:intron 35.0%
TATTCCAGGGAATCAATTCT+GGG + chr3_3:41779450-41779469 None:intergenic 35.0%
ATATTCCAGGGAATCAATTC+TGG + chr3_3:41779451-41779470 None:intergenic 35.0%
! CTCGTCTAGTTTACATGATA+AGG + chr3_3:41779578-41779597 None:intergenic 35.0%
CTTATCATGTAAACTAGACG+AGG - chr3_3:41779576-41779595 Msa0452700:intron 35.0%
! GTTACTTAGGAGGGTATAAA+TGG - chr3_3:41779634-41779653 Msa0452700:intron 35.0%
! ATTTTCATTCCCAGCACAAA+AGG + chr3_3:41779708-41779727 None:intergenic 35.0%
! TTTTGTGCTGGGAATGAAAA+TGG - chr3_3:41779707-41779726 Msa0452700:intron 35.0%
TTTGTGCTGGGAATGAAAAT+GGG - chr3_3:41779708-41779727 Msa0452700:intron 35.0%
CTGCTACAAATTAAGTTCCT+GGG + chr3_3:41779835-41779854 None:intergenic 35.0%
ACTGCTACAAATTAAGTTCC+TGG + chr3_3:41779836-41779855 None:intergenic 35.0%
TCATTTGATGGAGGAAGAAA+AGG + chr3_3:41779961-41779980 None:intergenic 35.0%
ACAACTATCTCATTTGATGG+AGG + chr3_3:41779970-41779989 None:intergenic 35.0%
CAGTTAATAGGAGACAAATG+GGG + chr3_3:41780003-41780022 None:intergenic 35.0%
GACAGTTAATAGGAGACAAA+TGG + chr3_3:41780005-41780024 None:intergenic 35.0%
! CTCCTATTAACTGTCTTGTT+TGG - chr3_3:41780010-41780029 Msa0452700:intron 35.0%
AATGTAATGCACGTGTCTTA+AGG + chr3_3:41780215-41780234 None:intergenic 35.0%
GAGGGATGAAGTACAAATTT+CGG - chr3_3:41780253-41780272 Msa0452700:intron 35.0%
AAAGGAGATAGAACCAACAT+CGG + chr3_3:41780291-41780310 None:intergenic 35.0%
GTTCTATCTCCTTTCTTTCT+TGG - chr3_3:41780297-41780316 Msa0452700:CDS 35.0%
TCTATCTCCTTTCTTTCTTG+GGG - chr3_3:41780299-41780318 Msa0452700:CDS 35.0%
! TCTGCAACTCCTGTAATTTT+GGG + chr3_3:41780445-41780464 None:intergenic 35.0%
! TTCTGCAACTCCTGTAATTT+TGG + chr3_3:41780446-41780465 None:intergenic 35.0%
TTGTGATTGAGTGAAGGATT+GGG + chr3_3:41780505-41780524 None:intergenic 35.0%
AATTGTTAAAGAGTCCCATC+AGG - chr3_3:41780694-41780713 Msa0452700:intron 35.0%
GCAACATCTTTCTGTAATTG+AGG + chr3_3:41780846-41780865 None:intergenic 35.0%
TTACAGAAAGATGTTGCAGA+TGG - chr3_3:41780849-41780868 Msa0452700:intron 35.0%
GAAGTATATAGTCCTTTGGT+TGG + chr3_3:41780885-41780904 None:intergenic 35.0%
! CATTTTCGCCTACAAATAAG+AGG + chr3_3:41780920-41780939 None:intergenic 35.0%
CAACTAACTCTTACTCTTAC+CGG - chr3_3:41780966-41780985 Msa0452700:CDS 35.0%
TTTGCTTACAAACTGTAGCT+CGG - chr3_3:41781181-41781200 Msa0452700:CDS 35.0%
TGAACTTAAGAGATTACCAG+GGG + chr3_3:41781257-41781276 None:intergenic 35.0%
AAAACGTACTGAACTACATG+TGG - chr3_3:41781371-41781390 Msa0452700:intron 35.0%
! ATAGGACAGAAAAGTACACT+TGG + chr3_3:41781398-41781417 None:intergenic 35.0%
ATGGTCAAAGATAACTAACC+TGG - chr3_3:41781524-41781543 Msa0452700:intron 35.0%
GTCTTTCTTGGGTAAAAGTT+TGG - chr3_3:41781584-41781603 Msa0452700:intron 35.0%
CATTATCTCTTGTAGAACTC+AGG + chr3_3:41781650-41781669 None:intergenic 35.0%
AATAGAATCATCCTTTGGCT+TGG - chr3_3:41781697-41781716 Msa0452700:intron 35.0%
GTTCAGTGTTACCAAATAGA+AGG - chr3_3:41781915-41781934 Msa0452700:intron 35.0%
ACACTTGATCAATCTATAGC+TGG + chr3_3:41782155-41782174 None:intergenic 35.0%
! ATTTGAAATTCTACCGGCTA+TGG - chr3_3:41782284-41782303 Msa0452700:intron 35.0%
CAGCTTACATTGAATTCTAC+CGG - chr3_3:41782332-41782351 Msa0452700:intron 35.0%
TTGTTACAAACGCGAAAAGA+CGG + chr3_3:41782538-41782557 None:intergenic 35.0%
!!! ATTTTGAGGCAAAAACTCAC+CGG + chr3_3:41782612-41782631 None:intergenic 35.0%
!! TTTCGTTTGGACTGATTTTG+AGG + chr3_3:41782626-41782645 None:intergenic 35.0%
! TTACATGTGTTGGATTGGAA+GGG + chr3_3:41783149-41783168 None:intergenic 35.0%
! GTTTGTTACATGTGTTGGAT+TGG + chr3_3:41783154-41783173 None:intergenic 35.0%
CCAACACATGTAACAAACAA+CGG - chr3_3:41783156-41783175 Msa0452700:CDS 35.0%
TTGCAAGAGAAGAACGATTA+TGG + chr3_3:41783244-41783263 None:intergenic 35.0%
!! TACAGATTCTGTTGATTCGA+AGG + chr3_3:41783339-41783358 None:intergenic 35.0%
AACAGAATCTGTAAGCACTT+CGG - chr3_3:41783346-41783365 Msa0452700:CDS 35.0%
TCTTCTCATTGCTGAAACTT+AGG + chr3_3:41783579-41783598 None:intergenic 35.0%
! TGGTGTTCTTGTTGCTGTTA+AGG - chr3_3:41774507-41774526 Msa0452700:intron 40.0%
GTGAAGAGAGTTAAGGAGTT+GGG - chr3_3:41774613-41774632 Msa0452700:intron 40.0%
TACAAAGTCAGAGTCTGGTT+TGG + chr3_3:41775282-41775301 None:intergenic 40.0%
AAACCAGACTCTGACTTTGT+AGG - chr3_3:41775281-41775300 Msa0452700:intron 40.0%
AACCAGACTCTGACTTTGTA+GGG - chr3_3:41775282-41775301 Msa0452700:intron 40.0%
GTTTGAGTGGTGACATTATG+TGG - chr3_3:41776036-41776055 Msa0452700:intron 40.0%
CATGGGTTCCAGCATTTATT+TGG - chr3_3:41776108-41776127 Msa0452700:intron 40.0%
ATTGTTGACGAATGACCTGA+TGG - chr3_3:41776257-41776276 Msa0452700:intron 40.0%
CATCACATTATGCATCCATC+AGG + chr3_3:41776275-41776294 None:intergenic 40.0%
AGGCAATGTGTTGTATCGTT+GGG - chr3_3:41776553-41776572 Msa0452700:intron 40.0%
! GTAGGTTTGAAGCCAACATA+TGG - chr3_3:41776625-41776644 Msa0452700:intron 40.0%
TATCATGACCAGCAATTGCA+TGG + chr3_3:41776744-41776763 None:intergenic 40.0%
TCATACCTGCTTACTTGATG+TGG + chr3_3:41776776-41776795 None:intergenic 40.0%
TGGTCATTGACGACAATGTT+TGG - chr3_3:41776853-41776872 Msa0452700:intron 40.0%
TTGGAAAGTAAGCCCTTGAA+AGG - chr3_3:41777052-41777071 Msa0452700:intron 40.0%
CCAATTCTCAGTCCTTTCAA+GGG + chr3_3:41777067-41777086 None:intergenic 40.0%
ACCAATTCTCAGTCCTTTCA+AGG + chr3_3:41777068-41777087 None:intergenic 40.0%
!! ATTGAAGATGGTGTTGATGC+TGG - chr3_3:41777103-41777122 Msa0452700:intron 40.0%
!! TGATGCTGCTTCACATTTTG+AGG - chr3_3:41777144-41777163 Msa0452700:intron 40.0%
!!! GCTTCACATTTTGAGGCATT+AGG - chr3_3:41777151-41777170 Msa0452700:intron 40.0%
CAGTGACACCTGTAAGTTAA+TGG + chr3_3:41777303-41777322 None:intergenic 40.0%
AAGATGATTCAGACAAAGCG+AGG + chr3_3:41777361-41777380 None:intergenic 40.0%
TGTCTCGCTATGATGGTATT+AGG - chr3_3:41777387-41777406 Msa0452700:intron 40.0%
CTATGATGGTATTAGGTCAG+TGG - chr3_3:41777394-41777413 Msa0452700:intron 40.0%
TGTGTTCGGTTGTGTGTATT+TGG + chr3_3:41777454-41777473 None:intergenic 40.0%
CTAGCTCATCAGCATAAACT+TGG + chr3_3:41777560-41777579 None:intergenic 40.0%
CATCATAGTAACCAGCTGAA+AGG + chr3_3:41777806-41777825 None:intergenic 40.0%
ATGCAAAAGGAAAGCTACAC+AGG + chr3_3:41778254-41778273 None:intergenic 40.0%
TACTACAATATGCAACGACC+CGG + chr3_3:41778707-41778726 None:intergenic 40.0%
AACTGATGACTTCATTCGCT+GGG + chr3_3:41778796-41778815 None:intergenic 40.0%
TAACTGATGACTTCATTCGC+TGG + chr3_3:41778797-41778816 None:intergenic 40.0%
ATAACTAGTTATGCACCCAG+TGG - chr3_3:41779034-41779053 Msa0452700:intron 40.0%
GATCAAACTCTCTAAACCAC+TGG + chr3_3:41779053-41779072 None:intergenic 40.0%
TAGGTAAATGTCAACCTAGC+TGG - chr3_3:41779169-41779188 Msa0452700:intron 40.0%
GATTGGTGCAGCATTTAATG+AGG - chr3_3:41779264-41779283 Msa0452700:intron 40.0%
! ACACTAAACTTCGTGTTGAC+GGG - chr3_3:41779308-41779327 Msa0452700:intron 40.0%
!! AAGAGCATTAAAGAGGGAGA+TGG - chr3_3:41779382-41779401 Msa0452700:intron 40.0%
AGGGAGATGGTTAAAACCTA+AGG - chr3_3:41779395-41779414 Msa0452700:intron 40.0%
GGGAGATGGTTAAAACCTAA+GGG - chr3_3:41779396-41779415 Msa0452700:intron 40.0%
! TATTCCCAGAATTGATTCCC+TGG - chr3_3:41779443-41779462 Msa0452700:intron 40.0%
ACTAGACGAGGTACACATAT+TGG - chr3_3:41779588-41779607 Msa0452700:intron 40.0%
TTCCTTGCAGTTACTTAGGA+GGG - chr3_3:41779625-41779644 Msa0452700:intron 40.0%
AAACAAAGGAAGTCAACTGC+TGG - chr3_3:41779666-41779685 Msa0452700:intron 40.0%
AACAAAGGAAGTCAACTGCT+GGG - chr3_3:41779667-41779686 Msa0452700:intron 40.0%
TTGTGCTGGGAATGAAAATG+GGG - chr3_3:41779709-41779728 Msa0452700:intron 40.0%
AATTCCCATGTTAGATTCCC+AGG - chr3_3:41779815-41779834 Msa0452700:intron 40.0%
AGTTCCTGGGAATCTAACAT+GGG + chr3_3:41779822-41779841 None:intergenic 40.0%
AAGTTCCTGGGAATCTAACA+TGG + chr3_3:41779823-41779842 None:intergenic 40.0%
GGATGAAGTACAAATTTCGG+TGG - chr3_3:41780256-41780275 Msa0452700:intron 40.0%
AACCATTCCCCAAGAAAGAA+AGG + chr3_3:41780309-41780328 None:intergenic 40.0%
!! AACTCCTGTAATTTTGGGGA+GGG + chr3_3:41780440-41780459 None:intergenic 40.0%
! CTGCAACTCCTGTAATTTTG+GGG + chr3_3:41780444-41780463 None:intergenic 40.0%
TGTGATTGAGTGAAGGATTG+GGG + chr3_3:41780504-41780523 None:intergenic 40.0%
CTTGTGATTGAGTGAAGGAT+TGG + chr3_3:41780506-41780525 None:intergenic 40.0%
GGTATCTTGTGATTGAGTGA+AGG + chr3_3:41780511-41780530 None:intergenic 40.0%
TATAAAGATGAGGGGTGAGA+GGG + chr3_3:41780537-41780556 None:intergenic 40.0%
GTAACTGTTAGTACAAGAGC+AGG + chr3_3:41780610-41780629 None:intergenic 40.0%
ACAAGGAGAATAGTTGTGAG+GGG + chr3_3:41780654-41780673 None:intergenic 40.0%
GACAAGGAGAATAGTTGTGA+GGG + chr3_3:41780655-41780674 None:intergenic 40.0%
AACTATTCTCCTTGTCCTCA+AGG - chr3_3:41780659-41780678 Msa0452700:intron 40.0%
ATTACAAGATGTCCACCTTG+AGG + chr3_3:41780677-41780696 None:intergenic 40.0%
ATAACAGGAACATCAGACAG+TGG + chr3_3:41780723-41780742 None:intergenic 40.0%
TATATAGTCCTTTGGTTGGG+AGG + chr3_3:41780881-41780900 None:intergenic 40.0%
! GGGAGAAGTATATAGTCCTT+TGG + chr3_3:41780889-41780908 None:intergenic 40.0%
CGGTAAGAGTAAGAGTTAGT+TGG + chr3_3:41780968-41780987 None:intergenic 40.0%
! AGGTGTTTGTTAGTAAGTGC+CGG + chr3_3:41780988-41781007 None:intergenic 40.0%
TGTGAGTTGTATCACAGATG+AGG + chr3_3:41781029-41781048 None:intergenic 40.0%
!!! ATTTTTTATTGCTGTCCCCC+TGG - chr3_3:41781238-41781257 Msa0452700:intron 40.0%
GAACTTAAGAGATTACCAGG+GGG + chr3_3:41781256-41781275 None:intergenic 40.0%
CTCACGTACTATTACACTGT+CGG - chr3_3:41781464-41781483 Msa0452700:intron 40.0%
CCAAAAAGAGTAGTAAGACC+AGG + chr3_3:41781545-41781564 None:intergenic 40.0%
!!! CCTGGTCTTACTACTCTTTT+TGG - chr3_3:41781542-41781561 Msa0452700:intron 40.0%
TAAGCGATCGTTCTACATCT+TGG - chr3_3:41781829-41781848 Msa0452700:intron 40.0%
TCAGTTTCATGAAAATGCGG+TGG - chr3_3:41781870-41781889 Msa0452700:intron 40.0%
TGGTCACACATGATTGAATC+TGG - chr3_3:41781969-41781988 Msa0452700:intron 40.0%
! GGCCTTGTAATTTACTGTTG+AGG - chr3_3:41782213-41782232 Msa0452700:intron 40.0%
! ACCTTGCTGCTTATTGTAAC+CGG + chr3_3:41782354-41782373 None:intergenic 40.0%
TGTTACAAACGCGAAAAGAC+GGG + chr3_3:41782537-41782556 None:intergenic 40.0%
! AAGGTGTTTGTGGTTTCGTT+TGG + chr3_3:41782639-41782658 None:intergenic 40.0%
! GTTACATGTGTTGGATTGGA+AGG + chr3_3:41783150-41783169 None:intergenic 40.0%
! CCGTTGTTTGTTACATGTGT+TGG + chr3_3:41783159-41783178 None:intergenic 40.0%
!! TAAAGAGTGTGCTTTTCCCA+AGG + chr3_3:41783267-41783286 None:intergenic 40.0%
!! AGATTCTGTTGATTCGAAGG+TGG + chr3_3:41783336-41783355 None:intergenic 40.0%
!! TCACACTCACTCTAGAGTCT+AGG - chr3_3:41774153-41774172 Msa0452700:intron 45.0%
CGAGGATACTTGAGGGTTAT+CGG - chr3_3:41774569-41774588 Msa0452700:intron 45.0%
GGTGAAGAGAGTTAAGGAGT+TGG - chr3_3:41774612-41774631 Msa0452700:intron 45.0%
AAGAGAGTTAAGGAGTTGGG+TGG - chr3_3:41774616-41774635 Msa0452700:intron 45.0%
AGAGAGTTAAGGAGTTGGGT+GGG - chr3_3:41774617-41774636 Msa0452700:intron 45.0%
! AGTTGGGTGGGATTGTTGTT+GGG - chr3_3:41774629-41774648 Msa0452700:intron 45.0%
CTGAAATGCAGAAGCTTCAG+TGG + chr3_3:41774689-41774708 None:intergenic 45.0%
CACTGAAGCTTCTGCATTTC+AGG - chr3_3:41774687-41774706 Msa0452700:intron 45.0%
!! AAAGTCAGAGTCTGGTTTGG+TGG + chr3_3:41775279-41775298 None:intergenic 45.0%
! TTTGTAGGGCGTTCTCAGAT+AGG - chr3_3:41775296-41775315 Msa0452700:intron 45.0%
! GGGACCTAATTGATAGCAAG+TGG - chr3_3:41775465-41775484 Msa0452700:intron 45.0%
TTCGTATGGCGCTCTCAAAT+AGG + chr3_3:41775561-41775580 None:intergenic 45.0%
AACTAGTCCCAGACTTCGTA+TGG + chr3_3:41775575-41775594 None:intergenic 45.0%
!! TACGAAGTCTGGGACTAGTT+TGG - chr3_3:41775575-41775594 Msa0452700:three_prime_UTR 45.0%
GCTTAAATGTCCACCCAAAC+TGG + chr3_3:41775741-41775760 None:intergenic 45.0%
! CATTAGTGTGGGGTTAGTGT+TGG - chr3_3:41775859-41775878 Msa0452700:exon 45.0%
CATGACTGACATCAGCCAAA+TGG + chr3_3:41775909-41775928 None:intergenic 45.0%
CTGATGTCAGTCATGTTGAG+CGG - chr3_3:41775914-41775933 Msa0452700:CDS 45.0%
TACAAAAAGTGGGGTTGTGC+TGG - chr3_3:41776330-41776349 Msa0452700:intron 45.0%
CAACCCGTGGGATGTTAATA+GGG - chr3_3:41776486-41776505 Msa0452700:intron 45.0%
CAACGATACAACACATTGCC+TGG + chr3_3:41776554-41776573 None:intergenic 45.0%
CAGGCAATGTGTTGTATCGT+TGG - chr3_3:41776552-41776571 Msa0452700:intron 45.0%
GTATCGTTGGGAAGTGATAC+TGG - chr3_3:41776565-41776584 Msa0452700:intron 45.0%
ACAACACCGCAAAATGATGC+CGG + chr3_3:41776607-41776626 None:intergenic 45.0%
!!! GCATCATTTTGCGGTGTTGT+AGG - chr3_3:41776607-41776626 Msa0452700:intron 45.0%
CGTCTCAAGATTTGGACTCA+TGG - chr3_3:41776651-41776670 Msa0452700:intron 45.0%
AGATGAACCAAAGCAGCCAA+TGG + chr3_3:41776698-41776717 None:intergenic 45.0%
ATTCTCCTCCATGCAATTGC+TGG - chr3_3:41776733-41776752 Msa0452700:intron 45.0%
TGATGCCACATCAAGTAAGC+AGG - chr3_3:41776768-41776787 Msa0452700:intron 45.0%
CCCTTGAAAGGACTGAGAAT+TGG - chr3_3:41777064-41777083 Msa0452700:intron 45.0%
ATTAGGATGCTCTGTGAACG+AGG - chr3_3:41777168-41777187 Msa0452700:intron 45.0%
! TCACTGCCATCCTTTTCACT+TGG - chr3_3:41777317-41777336 Msa0452700:intron 45.0%
! CACTGCCATCCTTTTCACTT+GGG - chr3_3:41777318-41777337 Msa0452700:intron 45.0%
AAAGCGAGGACATAGTATGC+TGG + chr3_3:41777347-41777366 None:intergenic 45.0%
TCCAACTTGTCTCGCTATGA+TGG - chr3_3:41777380-41777399 Msa0452700:intron 45.0%
ACCATCATAGCGAGACAAGT+TGG + chr3_3:41777384-41777403 None:intergenic 45.0%
GATGAGCTAGACTCTCTCTA+TGG - chr3_3:41777570-41777589 Msa0452700:intron 45.0%
TACCTCAGAACCTAACCCTT+TGG + chr3_3:41777607-41777626 None:intergenic 45.0%
ATATTACAAACGAGCGCAGC+AGG - chr3_3:41777827-41777846 Msa0452700:intron 45.0%
TTGGGTTAAGAAGAACCGAG+AGG + chr3_3:41777897-41777916 None:intergenic 45.0%
AGACACGTAAAGAACAGGAG+TGG + chr3_3:41778012-41778031 None:intergenic 45.0%
GAACGCTGATAAGACAACCT+AGG + chr3_3:41778066-41778085 None:intergenic 45.0%
GATCCTTTGGCTATGTATGC+TGG - chr3_3:41778342-41778361 Msa0452700:intron 45.0%
TCACCAGCATACATAGCCAA+AGG + chr3_3:41778348-41778367 None:intergenic 45.0%
!! CTGCTGGTTTATGCCTTAGA+TGG - chr3_3:41778630-41778649 Msa0452700:intron 45.0%
TTCGCTGGGATACTCCTTTA+TGG + chr3_3:41778782-41778801 None:intergenic 45.0%
TCTGCTGTGTAGTTGAGACA+CGG + chr3_3:41778866-41778885 None:intergenic 45.0%
! CACTAAACTTCGTGTTGACG+GGG - chr3_3:41779309-41779328 Msa0452700:intron 45.0%
!! AACCTAAGGGAGCGTTTGAT+TGG - chr3_3:41779409-41779428 Msa0452700:intron 45.0%
!! ACCTAAGGGAGCGTTTGATT+GGG - chr3_3:41779410-41779429 Msa0452700:intron 45.0%
TGGGTTCCTTGCAGTTACTT+AGG - chr3_3:41779621-41779640 Msa0452700:intron 45.0%
GTTCCTTGCAGTTACTTAGG+AGG - chr3_3:41779624-41779643 Msa0452700:intron 45.0%
TACCCTCCTAAGTAACTGCA+AGG + chr3_3:41779630-41779649 None:intergenic 45.0%
! ATCATTCCCACCTTTTGTGC+TGG - chr3_3:41779695-41779714 Msa0452700:intron 45.0%
! TCATTCCCACCTTTTGTGCT+GGG - chr3_3:41779696-41779715 Msa0452700:intron 45.0%
TCATTCCCAGCACAAAAGGT+GGG + chr3_3:41779704-41779723 None:intergenic 45.0%
TTCATTCCCAGCACAAAAGG+TGG + chr3_3:41779705-41779724 None:intergenic 45.0%
CTCCTTTCTTTCTTGGGGAA+TGG - chr3_3:41780304-41780323 Msa0452700:CDS 45.0%
TTTCTTGGGGAATGGTTCGA+AGG - chr3_3:41780312-41780331 Msa0452700:CDS 45.0%
!! ACTCCTGTAATTTTGGGGAG+GGG + chr3_3:41780439-41780458 None:intergenic 45.0%
!! CAACTCCTGTAATTTTGGGG+AGG + chr3_3:41780441-41780460 None:intergenic 45.0%
GTATAAAGATGAGGGGTGAG+AGG + chr3_3:41780538-41780557 None:intergenic 45.0%
! AAGAGCAGGTTAGTTCAGCT+GGG + chr3_3:41780596-41780615 None:intergenic 45.0%
GGACAAGGAGAATAGTTGTG+AGG + chr3_3:41780656-41780675 None:intergenic 45.0%
TATTCTCCTTGTCCTCAAGG+TGG - chr3_3:41780662-41780681 Msa0452700:intron 45.0%
TCAGACAGTGGAATCCTGAT+GGG + chr3_3:41780711-41780730 None:intergenic 45.0%
ATCAGACAGTGGAATCCTGA+TGG + chr3_3:41780712-41780731 None:intergenic 45.0%
CACACACAAGGGTTCATAAC+AGG + chr3_3:41780738-41780757 None:intergenic 45.0%
AGTGACTCGATCACACACAA+GGG + chr3_3:41780749-41780768 None:intergenic 45.0%
TGGTATAAGAGCTCCGATCT+TGG + chr3_3:41780775-41780794 None:intergenic 45.0%
GATATCAGGTGGTTATCGAC+TGG + chr3_3:41780795-41780814 None:intergenic 45.0%
! GCTGCATTTTGCCCTAGATT+GGG - chr3_3:41781327-41781346 Msa0452700:intron 45.0%
! CATTTTGCCCTAGATTGGGT+TGG - chr3_3:41781331-41781350 Msa0452700:intron 45.0%
AATGCAGCCAACCCAATCTA+GGG + chr3_3:41781341-41781360 None:intergenic 45.0%
AAATGCAGCCAACCCAATCT+AGG + chr3_3:41781342-41781361 None:intergenic 45.0%
CGTACTATTACACTGTCGGT+AGG - chr3_3:41781468-41781487 Msa0452700:intron 45.0%
GTTCCACCAATCATAGCTGA+TGG - chr3_3:41781790-41781809 Msa0452700:intron 45.0%
TCAACGCCATCAGCTATGAT+TGG + chr3_3:41781799-41781818 None:intergenic 45.0%
! CTGATGGCGTTGAATAACGA+GGG - chr3_3:41781806-41781825 Msa0452700:intron 45.0%
TGGCTGAAGCAGGTATGTTT+AGG - chr3_3:41781890-41781909 Msa0452700:intron 45.0%
GGCTGAAGCAGGTATGTTTA+GGG - chr3_3:41781891-41781910 Msa0452700:intron 45.0%
GTAAAGGAGCAACTGCTCAT+CGG - chr3_3:41782173-41782192 Msa0452700:intron 45.0%
ACCGGTTACAATAAGCAGCA+AGG - chr3_3:41782350-41782369 Msa0452700:intron 45.0%
! TGGATTGGAAGGGCTAGAAA+CGG + chr3_3:41783139-41783158 None:intergenic 45.0%
TCGTTCTTCTCTTGCAACCT+TGG - chr3_3:41783247-41783266 Msa0452700:CDS 45.0%
CGTTCTTCTCTTGCAACCTT+GGG - chr3_3:41783248-41783267 Msa0452700:CDS 45.0%
!! AAAAAAAAAAATTAGTTATT+AGG - chr3_3:41774083-41774102 Msa0452700:three_prime_UTR 5.0%
!! NNNNNNNNNNAAAATTAACT+AGG + chr3_3:41775144-41775163 None:intergenic 5.0%
!! GGTGATGGTGGATGATGGAA+GGG + chr3_3:41774239-41774258 None:intergenic 50.0%
!! TGGTGATGGTGGATGATGGA+AGG + chr3_3:41774240-41774259 None:intergenic 50.0%
GGATTGAATGAGGTCGGTAG+CGG + chr3_3:41774353-41774372 None:intergenic 50.0%
GAGGTGGGATTGAATGAGGT+CGG + chr3_3:41774359-41774378 None:intergenic 50.0%
GCAACAAGAACACCAGCAAG+AGG + chr3_3:41774502-41774521 None:intergenic 50.0%
GAGTTGGGTGGGATTGTTGT+TGG - chr3_3:41774628-41774647 Msa0452700:intron 50.0%
!! GAAGTCTGGGACTAGTTTGG+TGG - chr3_3:41775578-41775597 Msa0452700:three_prime_UTR 50.0%
CTGCCCCATAAAGCAACTGT+AGG + chr3_3:41776172-41776191 None:intergenic 50.0%
!!! TGCTGGTTTTTCTCCGTCTG+TGG - chr3_3:41776347-41776366 Msa0452700:intron 50.0%
!!! GCTGGTTTTTCTCCGTCTGT+GGG - chr3_3:41776348-41776367 Msa0452700:intron 50.0%
! GTTTTTCTCCGTCTGTGGGT+GGG - chr3_3:41776352-41776371 Msa0452700:intron 50.0%
CCTATTAACATCCCACGGGT+TGG + chr3_3:41776488-41776507 None:intergenic 50.0%
CCAACCCGTGGGATGTTAAT+AGG - chr3_3:41776485-41776504 Msa0452700:intron 50.0%
GCACCCTATTAACATCCCAC+GGG + chr3_3:41776492-41776511 None:intergenic 50.0%
GGCACCCTATTAACATCCCA+CGG + chr3_3:41776493-41776512 None:intergenic 50.0%
! TGGGATGTTAATAGGGTGCC+AGG - chr3_3:41776493-41776512 Msa0452700:intron 50.0%
! GATGTTAATAGGGTGCCAGG+AGG - chr3_3:41776496-41776515 Msa0452700:intron 50.0%
TCGTTGGGAAGTGATACTGG+TGG - chr3_3:41776568-41776587 Msa0452700:intron 50.0%
! GTGATACTGGTGGAAGTGTG+AGG - chr3_3:41776578-41776597 Msa0452700:intron 50.0%
TATGGGCGCGTCTCAAGATT+TGG - chr3_3:41776643-41776662 Msa0452700:intron 50.0%
GCGTCATCACTTGATGCCAT+TGG - chr3_3:41776679-41776698 Msa0452700:intron 50.0%
! CTTGATGCCATTGGCTGCTT+TGG - chr3_3:41776688-41776707 Msa0452700:intron 50.0%
GTTCATCTGTCGCTGATGCT+GGG - chr3_3:41776710-41776729 Msa0452700:intron 50.0%
CATGACCAGCAATTGCATGG+AGG + chr3_3:41776741-41776760 None:intergenic 50.0%
GGCAACCCAAGTGAAAAGGA+TGG + chr3_3:41777326-41777345 None:intergenic 50.0%
TGCTGGCAACCCAAGTGAAA+AGG + chr3_3:41777330-41777349 None:intergenic 50.0%
TTTGGACGAAGAGAGCGAGA+GGG + chr3_3:41777436-41777455 None:intergenic 50.0%
ATTTGGACGAAGAGAGCGAG+AGG + chr3_3:41777437-41777456 None:intergenic 50.0%
TATGGTGAATCCCGAGCCAA+AGG - chr3_3:41777588-41777607 Msa0452700:intron 50.0%
ATGGTGAATCCCGAGCCAAA+GGG - chr3_3:41777589-41777608 Msa0452700:intron 50.0%
! AGAACCTAACCCTTTGGCTC+GGG + chr3_3:41777601-41777620 None:intergenic 50.0%
CAGAACCTAACCCTTTGGCT+CGG + chr3_3:41777602-41777621 None:intergenic 50.0%
AGCCAAAGGGTTAGGTTCTG+AGG - chr3_3:41777602-41777621 Msa0452700:intron 50.0%
GGTGGGTCTGATATACCTCT+CGG - chr3_3:41777879-41777898 Msa0452700:intron 50.0%
! GAATAGCTTCAAGGAAGCGC+TGG - chr3_3:41778167-41778186 Msa0452700:intron 50.0%
GGCATAAACCAGCAGTACTG+TGG + chr3_3:41778625-41778644 None:intergenic 50.0%
CCACATGGTAAAACCAAGGC+AGG + chr3_3:41779199-41779218 None:intergenic 50.0%
!!! CCTGCCTTGGTTTTACCATG+TGG - chr3_3:41779196-41779215 Msa0452700:intron 50.0%
ACCCAATCAAACGCTCCCTT+AGG + chr3_3:41779414-41779433 None:intergenic 50.0%
!! GTGGTCTTATGCTCCGATGT+TGG - chr3_3:41780275-41780294 Msa0452700:intron 50.0%
!! TCCTGTAATTTTGGGGAGGG+GGG + chr3_3:41780437-41780456 None:intergenic 50.0%
!! CTCCTGTAATTTTGGGGAGG+GGG + chr3_3:41780438-41780457 None:intergenic 50.0%
! CAAGAGCAGGTTAGTTCAGC+TGG + chr3_3:41780597-41780616 None:intergenic 50.0%
AGATGTCCACCTTGAGGACA+AGG + chr3_3:41780671-41780690 None:intergenic 50.0%
CAGTGACTCGATCACACACA+AGG + chr3_3:41780750-41780769 None:intergenic 50.0%
CTTGTGTGTGATCGAGTCAC+TGG - chr3_3:41780748-41780767 Msa0452700:intron 50.0%
TCGAGTCACTGGTCCAAGAT+CGG - chr3_3:41780759-41780778 Msa0452700:intron 50.0%
! GGTTTGTTCCTCCCAACCAA+AGG - chr3_3:41780870-41780889 Msa0452700:intron 50.0%
! CGCTGCATTTTGCCCTAGAT+TGG - chr3_3:41781326-41781345 Msa0452700:intron 50.0%
ACGCCATCAGCTATGATTGG+TGG + chr3_3:41781796-41781815 None:intergenic 50.0%
! GCTGATGGCGTTGAATAACG+AGG - chr3_3:41781805-41781824 Msa0452700:intron 50.0%
ATTGGAAGGGCTAGAAACGG+AGG + chr3_3:41783136-41783155 None:intergenic 50.0%
! GCGCGCTGTTCTTTTTCTGA+AGG + chr3_3:41783208-41783227 None:intergenic 50.0%
CTGGTGAATCGAAGAGGAGA+TGG + chr3_3:41783291-41783310 None:intergenic 50.0%
AGCAAGCTGGTGAATCGAAG+AGG + chr3_3:41783297-41783316 None:intergenic 50.0%
AGAAACGAGGAACAGCAAGC+TGG + chr3_3:41783310-41783329 None:intergenic 50.0%
TCGAAGGTGGATCAGAAACG+AGG + chr3_3:41783323-41783342 None:intergenic 50.0%
AGAGAGTGGAACGTGGGGTT+TGG + chr3_3:41774207-41774226 None:intergenic 55.0%
AGCGTGAGAGAGTGGAACGT+GGG + chr3_3:41774213-41774232 None:intergenic 55.0%
AAGCGTGAGAGAGTGGAACG+TGG + chr3_3:41774214-41774233 None:intergenic 55.0%
! AAGGGAGAAGCGTGAGAGAG+TGG + chr3_3:41774221-41774240 None:intergenic 55.0%
!! TGGGTGGTGATGGTGGATGA+TGG + chr3_3:41774244-41774263 None:intergenic 55.0%
!! AGTAGCTTGGGTGGTGATGG+TGG + chr3_3:41774251-41774270 None:intergenic 55.0%
GAGAGTAGCTTGGGTGGTGA+TGG + chr3_3:41774254-41774273 None:intergenic 55.0%
GTGTGTGAGAGTAGCTTGGG+TGG + chr3_3:41774260-41774279 None:intergenic 55.0%
GGGGTGTGTGAGAGTAGCTT+GGG + chr3_3:41774263-41774282 None:intergenic 55.0%
AGGGTGAGGATTTGAGAGGG+GGG + chr3_3:41774301-41774320 None:intergenic 55.0%
GAGGGTGAGGATTTGAGAGG+GGG + chr3_3:41774302-41774321 None:intergenic 55.0%
GGAGGGTGAGGATTTGAGAG+GGG + chr3_3:41774303-41774322 None:intergenic 55.0%
CGGAGGGTGAGGATTTGAGA+GGG + chr3_3:41774304-41774323 None:intergenic 55.0%
! TGTTGGTGAGAAGGGAGTGG+CGG + chr3_3:41774324-41774343 None:intergenic 55.0%
!! GGAGAGGGTGTTGGTGAGAA+GGG + chr3_3:41774332-41774351 None:intergenic 55.0%
!! AATGAGGTCGGTAGCGGAGA+GGG + chr3_3:41774347-41774366 None:intergenic 55.0%
GGGTGAGGTGGGATTGAATG+AGG + chr3_3:41774363-41774382 None:intergenic 55.0%
AAGGGAGGTGGAGGAAGGAA+CGG + chr3_3:41774411-41774430 None:intergenic 55.0%
! CGAGGAGAGATTGGTCGGAA+GGG + chr3_3:41774429-41774448 None:intergenic 55.0%
CTGAGCGAGGAGAGATTGGT+CGG + chr3_3:41774434-41774453 None:intergenic 55.0%
! GAGGAAGTTGGTCCTCTTGC+TGG - chr3_3:41774487-41774506 Msa0452700:intron 55.0%
! TGGTGGGTCGAGGATACTTG+AGG - chr3_3:41774561-41774580 Msa0452700:intron 55.0%
GGTGGGTCGAGGATACTTGA+GGG - chr3_3:41774562-41774581 Msa0452700:intron 55.0%
TCGGCCTCCATTTGATGCGA+CGG - chr3_3:41774588-41774607 Msa0452700:intron 55.0%
TTCACCGCCGTCGCATCAAA+TGG + chr3_3:41774598-41774617 None:intergenic 55.0%
GACGGCGGTGAAGAGAGTTA+AGG - chr3_3:41774606-41774625 Msa0452700:intron 55.0%
CGCCCTACAAAGTCAGAGTC+TGG + chr3_3:41775287-41775306 None:intergenic 55.0%
!! TGAGAGCGCCATACGAAGTC+TGG - chr3_3:41775564-41775583 Msa0452700:three_prime_UTR 55.0%
!! GAGAGCGCCATACGAAGTCT+GGG - chr3_3:41775565-41775584 Msa0452700:three_prime_UTR 55.0%
!! GTGTGGGGTTAGTGTTGGTG+AGG - chr3_3:41775864-41775883 Msa0452700:exon 55.0%
GCTTTATGGGGCAGCAGCTA+TGG - chr3_3:41776178-41776197 Msa0452700:intron 55.0%
! GGTTTTTCTCCGTCTGTGGG+TGG - chr3_3:41776351-41776370 Msa0452700:intron 55.0%
TTAGCCAACCCACCCACAGA+CGG + chr3_3:41776363-41776382 None:intergenic 55.0%
AATAGGTGACTGCCAACCCG+TGG - chr3_3:41776473-41776492 Msa0452700:intron 55.0%
ATAGGTGACTGCCAACCCGT+GGG - chr3_3:41776474-41776493 Msa0452700:intron 55.0%
AGGAGGATCATCCGGAGGAT+CGG - chr3_3:41776513-41776532 Msa0452700:intron 55.0%
! AGGCAGCCGGCATCATTTTG+CGG - chr3_3:41776598-41776617 Msa0452700:intron 55.0%
CTTGAGACGCGCCCATATGT+TGG + chr3_3:41776640-41776659 None:intergenic 55.0%
GGTTCATCTGTCGCTGATGC+TGG - chr3_3:41776709-41776728 Msa0452700:intron 55.0%
TTGGACGAAGAGAGCGAGAG+GGG + chr3_3:41777435-41777454 None:intergenic 55.0%
GAATCCCGAGCCAAAGGGTT+AGG - chr3_3:41777594-41777613 Msa0452700:intron 55.0%
GGGACATATGCCCTTTCAGC+TGG - chr3_3:41777792-41777811 Msa0452700:intron 55.0%
AAGCAGCTGAAGGAGCTGCA+GGG + chr3_3:41778215-41778234 None:intergenic 55.0%
TAAGCAGCTGAAGGAGCTGC+AGG + chr3_3:41778216-41778235 None:intergenic 55.0%
!! AGAGCTCTGAGCCATTGAGC+AGG - chr3_3:41778599-41778618 Msa0452700:intron 55.0%
CAGTACTGTGGCCTGCTCAA+TGG + chr3_3:41778613-41778632 None:intergenic 55.0%
TCCCCCCTCCCCAAAATTAC+AGG - chr3_3:41780433-41780452 Msa0452700:intron 55.0%
TTTCCAGAGCTAGGGAGGAG+TGG + chr3_3:41780479-41780498 None:intergenic 55.0%
!! ACTCCTCCCTAGCTCTGGAA+AGG - chr3_3:41780478-41780497 Msa0452700:intron 55.0%
TTGGGGCCTTTCCAGAGCTA+GGG + chr3_3:41780487-41780506 None:intergenic 55.0%
ATTGGGGCCTTTCCAGAGCT+AGG + chr3_3:41780488-41780507 None:intergenic 55.0%
!! GTTGTGAGGGGTGTCTTGTG+AGG + chr3_3:41780642-41780661 None:intergenic 55.0%
TAGGGAGAGCTGCTGAGAGT+GGG - chr3_3:41781730-41781749 Msa0452700:intron 55.0%
GAAAATGCGGTGGCTGAAGC+AGG - chr3_3:41781880-41781899 Msa0452700:intron 55.0%
! GGAACGTGGGGTTTGGAGTG+TGG + chr3_3:41774200-41774219 None:intergenic 60.0%
GCGTGAGAGAGTGGAACGTG+GGG + chr3_3:41774212-41774231 None:intergenic 60.0%
! GGGGGTGTGTGAGAGTAGCT+TGG + chr3_3:41774264-41774283 None:intergenic 60.0%
GAGGATTTGAGAGGGGGGTG+CGG + chr3_3:41774296-41774315 None:intergenic 60.0%
GCGGAGGGTGAGGATTTGAG+AGG + chr3_3:41774305-41774324 None:intergenic 60.0%
!! GGGTGTTGGTGAGAAGGGAG+TGG + chr3_3:41774327-41774346 None:intergenic 60.0%
!! CGGAGAGGGTGTTGGTGAGA+AGG + chr3_3:41774333-41774352 None:intergenic 60.0%
!! GAATGAGGTCGGTAGCGGAG+AGG + chr3_3:41774348-41774367 None:intergenic 60.0%
GAAGGAACGGAGGTGGGGTT+CGG + chr3_3:41774398-41774417 None:intergenic 60.0%
TGGAGGAAGGAACGGAGGTG+GGG + chr3_3:41774403-41774422 None:intergenic 60.0%
GTGGAGGAAGGAACGGAGGT+GGG + chr3_3:41774404-41774423 None:intergenic 60.0%
ATTGGTCGGAAGGGAGGTGG+AGG + chr3_3:41774420-41774439 None:intergenic 60.0%
! GAGATTGGTCGGAAGGGAGG+TGG + chr3_3:41774423-41774442 None:intergenic 60.0%
! GGAGAGATTGGTCGGAAGGG+AGG + chr3_3:41774426-41774445 None:intergenic 60.0%
! GCGAGGAGAGATTGGTCGGA+AGG + chr3_3:41774430-41774449 None:intergenic 60.0%
CGACCAATCTCTCCTCGCTC+AGG - chr3_3:41774432-41774451 Msa0452700:intron 60.0%
GTGCCTGAGCGAGGAGAGAT+TGG + chr3_3:41774438-41774457 None:intergenic 60.0%
CCTCGACCGTAGAATCGCTG+CGG - chr3_3:41774462-41774481 Msa0452700:intron 60.0%
CTCGACCGTAGAATCGCTGC+GGG - chr3_3:41774463-41774482 Msa0452700:intron 60.0%
TCGACCGTAGAATCGCTGCG+GGG - chr3_3:41774464-41774483 Msa0452700:intron 60.0%
! CTGACATGCCGTCGACTGGT+GGG - chr3_3:41774545-41774564 Msa0452700:intron 60.0%
ATCCTCGACCCACCAGTCGA+CGG + chr3_3:41774556-41774575 None:intergenic 60.0%
GCCTCCATTTGATGCGACGG+CGG - chr3_3:41774591-41774610 Msa0452700:intron 60.0%
ACCGCCGTCGCATCAAATGG+AGG + chr3_3:41774595-41774614 None:intergenic 60.0%
TTCTCCGTCTGTGGGTGGGT+TGG - chr3_3:41776356-41776375 Msa0452700:intron 60.0%
! AGGGTGCCAGGAGGATCATC+CGG - chr3_3:41776505-41776524 Msa0452700:intron 60.0%
GATCCTCCGGATGATCCTCC+TGG + chr3_3:41776514-41776533 None:intergenic 60.0%
AACTGCAGCTGCCGATCCTC+CGG + chr3_3:41776527-41776546 None:intergenic 60.0%
! TGGTGGAAGTGTGAGGCAGC+CGG - chr3_3:41776585-41776604 Msa0452700:intron 60.0%
! GAGAGCGAGAGGGGTACATG+AGG + chr3_3:41777426-41777445 None:intergenic 60.0%
AGCAGCTGAAGGAGCTGCAG+GGG + chr3_3:41778214-41778233 None:intergenic 60.0%
TGAGCAGGCCACAGTACTGC+TGG - chr3_3:41778614-41778633 Msa0452700:intron 60.0%
CCAAGGCAGGTAGTCCAGCT+AGG + chr3_3:41779186-41779205 None:intergenic 60.0%
CCTAGCTGGACTACCTGCCT+TGG - chr3_3:41779183-41779202 Msa0452700:intron 60.0%
!! GGATCGACTGGCCTTCCTGT+TGG - chr3_3:41779232-41779251 Msa0452700:intron 60.0%
TGTCCACTCCTCCCTAGCTC+TGG - chr3_3:41780473-41780492 Msa0452700:intron 60.0%
AGATGAGGGGTGAGAGGGAG+AGG + chr3_3:41780532-41780551 None:intergenic 60.0%
GTAGGGAGAGCTGCTGAGAG+TGG - chr3_3:41781729-41781748 Msa0452700:intron 60.0%
! GGGGTGCGGTTGTAGGTTGG+GGG + chr3_3:41774282-41774301 None:intergenic 65.0%
! GGGGGTGCGGTTGTAGGTTG+GGG + chr3_3:41774283-41774302 None:intergenic 65.0%
! GGGGGGTGCGGTTGTAGGTT+GGG + chr3_3:41774284-41774303 None:intergenic 65.0%
! AGGGGGGTGCGGTTGTAGGT+TGG + chr3_3:41774285-41774304 None:intergenic 65.0%
! TGAGAGGGGGGTGCGGTTGT+AGG + chr3_3:41774289-41774308 None:intergenic 65.0%
! GGTGAGAAGGGAGTGGCGGA+GGG + chr3_3:41774320-41774339 None:intergenic 65.0%
TGGTGAGAAGGGAGTGGCGG+AGG + chr3_3:41774321-41774340 None:intergenic 65.0%
!! GTCGGTAGCGGAGAGGGTGT+TGG + chr3_3:41774341-41774360 None:intergenic 65.0%
! GGAGGTGGGGTTCGGTCAGA+CGG + chr3_3:41774390-41774409 None:intergenic 65.0%
GGTGGAGGAAGGAACGGAGG+TGG + chr3_3:41774405-41774424 None:intergenic 65.0%
GGAGGTGGAGGAAGGAACGG+AGG + chr3_3:41774408-41774427 None:intergenic 65.0%
GTCGGAAGGGAGGTGGAGGA+AGG + chr3_3:41774416-41774435 None:intergenic 65.0%
CGAGGTCATGTGCCTGAGCG+AGG + chr3_3:41774447-41774466 None:intergenic 65.0%
CCGCAGCGATTCTACGGTCG+AGG + chr3_3:41774465-41774484 None:intergenic 65.0%
CGACCGTAGAATCGCTGCGG+GGG - chr3_3:41774465-41774484 Msa0452700:intron 65.0%
CCTCCCCCGCAGCGATTCTA+CGG + chr3_3:41774471-41774490 None:intergenic 65.0%
ATCGCTGCGGGGGAGGAAGT+TGG - chr3_3:41774475-41774494 Msa0452700:intron 65.0%
ACGGCTGACATGCCGTCGAC+TGG - chr3_3:41774541-41774560 Msa0452700:intron 65.0%
! GCTGACATGCCGTCGACTGG+TGG - chr3_3:41774544-41774563 Msa0452700:intron 65.0%
GTGCCAGGAGGATCATCCGG+AGG - chr3_3:41776508-41776527 Msa0452700:intron 65.0%
CGGCAGCTGCAGTTTCTGCC+AGG - chr3_3:41776533-41776552 Msa0452700:intron 65.0%
GGGCCTTTCCAGAGCTAGGG+AGG + chr3_3:41780484-41780503 None:intergenic 65.0%
! GAAGGGAGTGGCGGAGGGTG+AGG + chr3_3:41774315-41774334 None:intergenic 70.0%
CAGACGGAGGCGGGTGAGGT+GGG + chr3_3:41774374-41774393 None:intergenic 70.0%
TCAGACGGAGGCGGGTGAGG+TGG + chr3_3:41774375-41774394 None:intergenic 70.0%
! GGGTTCGGTCAGACGGAGGC+GGG + chr3_3:41774383-41774402 None:intergenic 70.0%
! GGGGTTCGGTCAGACGGAGG+CGG + chr3_3:41774384-41774403 None:intergenic 70.0%
! GGTGGGGTTCGGTCAGACGG+AGG + chr3_3:41774387-41774406 None:intergenic 70.0%
CCGTAGAATCGCTGCGGGGG+AGG - chr3_3:41774468-41774487 Msa0452700:intron 70.0%
! TGCCGTCGACTGGTGGGTCG+AGG - chr3_3:41774551-41774570 Msa0452700:intron 70.0%
CGGTCAGACGGAGGCGGGTG+AGG + chr3_3:41774378-41774397 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 41774059 41783628 41774059 ID=Msa0452700;Name=Msa0452700
chr3_3 mRNA 41774059 41783628 41774059 ID=Msa0452700-mRNA-1;Parent=Msa0452700;Name=Msa0452700-mRNA-1;_AED=0.23;_eAED=0.23;_QI=125|1|1|1|0.81|0.75|12|455|537
chr3_3 exon 41774059 41774169 41774059 ID=Msa0452700-mRNA-1:exon:7617;Parent=Msa0452700-mRNA-1
chr3_3 exon 41775501 41775540 41775501 ID=Msa0452700-mRNA-1:exon:7616;Parent=Msa0452700-mRNA-1
chr3_3 exon 41775561 41775954 41775561 ID=Msa0452700-mRNA-1:exon:7615;Parent=Msa0452700-mRNA-1
chr3_3 exon 41778402 41778515 41778402 ID=Msa0452700-mRNA-1:exon:7614;Parent=Msa0452700-mRNA-1
chr3_3 exon 41779310 41779359 41779310 ID=Msa0452700-mRNA-1:exon:7613;Parent=Msa0452700-mRNA-1
chr3_3 exon 41779444 41779537 41779444 ID=Msa0452700-mRNA-1:exon:7612;Parent=Msa0452700-mRNA-1
chr3_3 exon 41779839 41779916 41779839 ID=Msa0452700-mRNA-1:exon:7611;Parent=Msa0452700-mRNA-1
chr3_3 exon 41780064 41780139 41780064 ID=Msa0452700-mRNA-1:exon:7610;Parent=Msa0452700-mRNA-1
chr3_3 exon 41780279 41780373 41780279 ID=Msa0452700-mRNA-1:exon:7609;Parent=Msa0452700-mRNA-1
chr3_3 exon 41780498 41780677 41780498 ID=Msa0452700-mRNA-1:exon:7608;Parent=Msa0452700-mRNA-1
chr3_3 exon 41780898 41781209 41780898 ID=Msa0452700-mRNA-1:exon:7607;Parent=Msa0452700-mRNA-1
chr3_3 exon 41782979 41783628 41782979 ID=Msa0452700-mRNA-1:exon:7606;Parent=Msa0452700-mRNA-1
chr3_3 five_prime_UTR 41783504 41783628 41783504 ID=Msa0452700-mRNA-1:five_prime_utr;Parent=Msa0452700-mRNA-1
chr3_3 CDS 41782979 41783503 41782979 ID=Msa0452700-mRNA-1:cds;Parent=Msa0452700-mRNA-1
chr3_3 CDS 41780898 41781209 41780898 ID=Msa0452700-mRNA-1:cds;Parent=Msa0452700-mRNA-1
chr3_3 CDS 41780498 41780677 41780498 ID=Msa0452700-mRNA-1:cds;Parent=Msa0452700-mRNA-1
chr3_3 CDS 41780279 41780373 41780279 ID=Msa0452700-mRNA-1:cds;Parent=Msa0452700-mRNA-1
chr3_3 CDS 41780064 41780139 41780064 ID=Msa0452700-mRNA-1:cds;Parent=Msa0452700-mRNA-1
chr3_3 CDS 41779839 41779916 41779839 ID=Msa0452700-mRNA-1:cds;Parent=Msa0452700-mRNA-1
chr3_3 CDS 41779444 41779537 41779444 ID=Msa0452700-mRNA-1:cds;Parent=Msa0452700-mRNA-1
chr3_3 CDS 41779310 41779359 41779310 ID=Msa0452700-mRNA-1:cds;Parent=Msa0452700-mRNA-1
chr3_3 CDS 41778402 41778515 41778402 ID=Msa0452700-mRNA-1:cds;Parent=Msa0452700-mRNA-1
chr3_3 CDS 41775865 41775954 41775865 ID=Msa0452700-mRNA-1:cds;Parent=Msa0452700-mRNA-1
chr3_3 three_prime_UTR 41775561 41775864 41775561 ID=Msa0452700-mRNA-1:three_prime_utr;Parent=Msa0452700-mRNA-1
chr3_3 three_prime_UTR 41775501 41775540 41775501 ID=Msa0452700-mRNA-1:three_prime_utr;Parent=Msa0452700-mRNA-1
chr3_3 three_prime_UTR 41774059 41774169 41774059 ID=Msa0452700-mRNA-1:three_prime_utr;Parent=Msa0452700-mRNA-1
Gene Sequence

>Msa0452700

ATGAAAATGCTATCCACACTCCAAACCCCACGTTCCACTCTCTCACGCTTCTCCCTTCCATCATCCACCATCACCACCCAAGCTACTCTCACACACCCCCAACCTACAACCGCACCCCCCTCTCAAATCCTCACCCTCCGCCACTCCCTTCTCACCAACACCCTCTCCGCTACCGACCTCATTCAATCCCACCTCACCCGCCTCCGTCTGACCGAACCCCACCTCCGTTCCTTCCTCCACCTCCCTTCCGACCAATCTCTCCTCGCTCAGGCACATGACCTCGACCGTAGAATCGCTGCGGGGGAGGAAGTTGGTCCTCTTGCTGGTGTTCTTGTTGCTGTTAAGGATAATATTTGTACGGCTGACATGCCGTCGACTGGTGGGTCGAGGATACTTGAGGGTTATCGGCCTCCATTTGATGCGACGGCGGTGAAGAGAGTTAAGGAGTTGGGTGGGATTGTTGTTGGGAAGACAAATATGGATGAGTTTGGTATGGGGAGTACCACTGAAGCTTCTGCATTTCAGGTGACTGCCAACCCGTGGGATGTTAATAGGGTGCCAGGAGGATCATCCGGAGGATCGGCAGCTGCAGTTTCTGCCAGGCAATGTGTTGTATCGTTGGGAAGTGATACTGGTGGAAGTGTGAGGCAGCCGGCATCATTTTGCGGTGTTGTAGGTTTGAAGCCAACATATGGGCGCGTCTCAAGATTTGGACTCATGGCGTATGCGTCATCACTTGATGCCATTGGCTGCTTTGGTTCATCTGTCGCTGATGCTGGGATTCTCCTCCATGCAATTGCTGGTCATGATAGATTTGATGCCACATCAAGTAAGCAGGAGGTGCCCAATTTTCTATCTCATTTTGACTATGCAAGTTCTTTGGAAAGTAAGCCCTTGAAAGGACTGAGAATTGGTTTGATTCGTGAAACTATTGAAGATGGTGTTGATGCTGGAGTAGTTTCTGCAATTCGTGATGCTGCTTCACATTTTGAGGCATTAGGATGCTCTGTGAACGAGGTGTCACTGCCATCCTTTTCACTTGGGTTGCCAGCATACTATGTCCTCGCTTTGTCTGAATCATCTTCCAACTTGTCTCGCTATGATGGTATTAGATATGGAAACCAAGTTTATGCTGATGAGCTAGACTCTCTCTATGGTGAATCCCGAGCCAAAGGGTTAGGTTCTGAGGTGAAAATGAGAATTTTGATGGGGACATATGCCCTTTCAGCTGGTTACTATGATGCATATTACAAACGAGCGCAGCAGGTGAGAACCATTATAAGGAATAGCTTCAAGGAAGCGCTGGACCAATATGATATCTTGATTTCCCCTGCAGCTCCTTCAGCTGCTTATAAAATTGGTGAAAAGAAAAATGATCCTTTGGCTATGTATGCTGGTGACATCATGACTGTAAATGTCAACCTAGCTGGACTACCTGCCTTGGTTTTACCATGTGGATTTATTGAGAATGGATCGACTGGCCTTCCTGTTGGCCTGCAAATGATTGGTGCAGCATTTAATGAGGGAGAGCTGCTGAGAGTGGGACATATCTTTGAGCAAACTCTTGAGAATTGCAGATTTGTTCCACCAATCATAGCTGATGGCGTTGAATAA
Protein sequence

>Msa0452700

MKMLSTLQTPRSTLSRFSLPSSTITTQATLTHPQPTTAPPSQILTLRHSLLTNTLSATDLIQSHLTRLRLTEPHLRSFLHLPSDQSLLAQAHDLDRRIAAGEEVGPLAGVLVAVKDNICTADMPSTGGSRILEGYRPPFDATAVKRVKELGGIVVGKTNMDEFGMGSTTEASAFQVTANPWDVNRVPGGSSGGSAAAVSARQCVVSLGSDTGGSVRQPASFCGVVGLKPTYGRVSRFGLMAYASSLDAIGCFGSSVADAGILLHAIAGHDRFDATSSKQEVPNFLSHFDYASSLESKPLKGLRIGLIRETIEDGVDAGVVSAIRDAASHFEALGCSVNEVSLPSFSLGLPAYYVLALSESSSNLSRYDGIRYGNQVYADELDSLYGESRAKGLGSEVKMRILMGTYALSAGYYDAYYKRAQQVRTIIRNSFKEALDQYDILISPAAPSAAYKIGEKKNDPLAMYAGDIMTVNVNLAGLPALVLPCGFIENGSTGLPVGLQMIGAAFNEGELLRVGHIFEQTLENCRFVPPIIADGVE*