Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0386270 | XP_003603860.1 | 98.876 | 178 | 2 | 0 | 1 | 178 | 1 | 178 | 1.89e-126 | 363 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0386270 | sp|Q9SM57|OEP21_PEA | 86.517 | 178 | 23 | 1 | 1 | 178 | 1 | 177 | 2.01e-111 | 317 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0386270 | G7J5Z3 | 98.876 | 178 | 2 | 0 | 1 | 178 | 1 | 178 | 9.03e-127 | 363 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa0386270 | 0.803697 | 3.080169e-49 | -8.615850e-47 |
| Msa0010460 | Msa0386270 | -0.808183 | 3.509314e-50 | -8.615850e-47 |
| Msa0017120 | Msa0386270 | 0.829987 | 3.784683e-55 | -8.615850e-47 |
| Msa0017940 | Msa0386270 | 0.818478 | 1.919397e-52 | -8.615850e-47 |
| Msa0018220 | Msa0386270 | 0.803419 | 3.518460e-49 | -8.615850e-47 |
| Msa0027540 | Msa0386270 | 0.816082 | 6.644109e-52 | -8.615850e-47 |
| Msa0030730 | Msa0386270 | 0.836206 | 1.071606e-56 | -8.615850e-47 |
| Msa0031720 | Msa0386270 | 0.800459 | 1.426946e-48 | -8.615850e-47 |
| Msa0032120 | Msa0386270 | 0.822332 | 2.506701e-53 | -8.615850e-47 |
| Msa0032400 | Msa0386270 | 0.847511 | 1.104033e-59 | -8.615850e-47 |
| Msa0039490 | Msa0386270 | 0.807882 | 4.068381e-50 | -8.615850e-47 |
| Msa0041540 | Msa0386270 | 0.818722 | 1.690373e-52 | -8.615850e-47 |
| Msa0044220 | Msa0386270 | 0.845976 | 2.901816e-59 | -8.615850e-47 |
| Msa0048020 | Msa0386270 | 0.819980 | 8.734582e-53 | -8.615850e-47 |
| Msa0050580 | Msa0386270 | 0.813765 | 2.168402e-51 | -8.615850e-47 |
| Msa0059960 | Msa0386270 | -0.841929 | 3.525701e-58 | -8.615850e-47 |
| Msa0065390 | Msa0386270 | 0.821380 | 4.164879e-53 | -8.615850e-47 |
| Msa0073820 | Msa0386270 | 0.836748 | 7.802115e-57 | -8.615850e-47 |
| Msa0075310 | Msa0386270 | 0.803937 | 2.746978e-49 | -8.615850e-47 |
| Msa0078090 | Msa0386270 | 0.849039 | 4.174709e-60 | -8.615850e-47 |
| Msa0082820 | Msa0386270 | 0.812863 | 3.422265e-51 | -8.615850e-47 |
| Msa0084680 | Msa0386270 | 0.823861 | 1.102447e-53 | -8.615850e-47 |
| Msa0089210 | Msa0386270 | 0.833551 | 4.996598e-56 | -8.615850e-47 |
| Msa0090800 | Msa0386270 | 0.826964 | 2.031190e-54 | -8.615850e-47 |
| Msa0091550 | Msa0386270 | 0.820461 | 6.777499e-53 | -8.615850e-47 |
| Msa0092180 | Msa0386270 | 0.843893 | 1.058881e-58 | -8.615850e-47 |
| Msa0092660 | Msa0386270 | 0.817294 | 3.552484e-52 | -8.615850e-47 |
| Msa0092680 | Msa0386270 | 0.805233 | 1.473979e-49 | -8.615850e-47 |
| Msa0092730 | Msa0386270 | 0.815003 | 1.154643e-51 | -8.615850e-47 |
| Msa0094700 | Msa0386270 | 0.820265 | 7.513404e-53 | -8.615850e-47 |
| Msa0097050 | Msa0386270 | 0.800053 | 1.726425e-48 | -8.615850e-47 |
| Msa0110710 | Msa0386270 | 0.822160 | 2.748516e-53 | -8.615850e-47 |
| Msa0112290 | Msa0386270 | 0.806421 | 8.292127e-50 | -8.615850e-47 |
| Msa0123170 | Msa0386270 | 0.823926 | 1.064426e-53 | -8.615850e-47 |
| Msa0130800 | Msa0386270 | 0.800257 | 1.568523e-48 | -8.615850e-47 |
| Msa0132180 | Msa0386270 | 0.806815 | 6.847822e-50 | -8.615850e-47 |
| Msa0135980 | Msa0386270 | 0.859801 | 3.216315e-63 | -8.615850e-47 |
| Msa0137600 | Msa0386270 | 0.808986 | 2.365372e-50 | -8.615850e-47 |
| Msa0139050 | Msa0386270 | 0.830198 | 3.361649e-55 | -8.615850e-47 |
| Msa0139900 | Msa0386270 | 0.826560 | 2.537161e-54 | -8.615850e-47 |
| Msa0141430 | Msa0386270 | 0.818791 | 1.630422e-52 | -8.615850e-47 |
| Msa0141670 | Msa0386270 | 0.806424 | 8.280378e-50 | -8.615850e-47 |
| Msa0141830 | Msa0386270 | 0.812187 | 4.809047e-51 | -8.615850e-47 |
| Msa0149500 | Msa0386270 | 0.811943 | 5.435339e-51 | -8.615850e-47 |
| Msa0157020 | Msa0386270 | 0.822048 | 2.916836e-53 | -8.615850e-47 |
| Msa0157350 | Msa0386270 | 0.808101 | 3.653645e-50 | -8.615850e-47 |
| Msa0170680 | Msa0386270 | 0.838407 | 2.928942e-57 | -8.615850e-47 |
| Msa0171780 | Msa0386270 | 0.837662 | 4.553166e-57 | -8.615850e-47 |
| Msa0171930 | Msa0386270 | 0.835915 | 1.270328e-56 | -8.615850e-47 |
| Msa0175280 | Msa0386270 | 0.805745 | 1.150639e-49 | -8.615850e-47 |
| Msa0176710 | Msa0386270 | 0.803528 | 3.338612e-49 | -8.615850e-47 |
| Msa0177280 | Msa0386270 | 0.842335 | 2.753813e-58 | -8.615850e-47 |
| Msa0181090 | Msa0386270 | 0.824454 | 8.002763e-54 | -8.615850e-47 |
| Msa0183610 | Msa0386270 | 0.829519 | 4.920444e-55 | -8.615850e-47 |
| Msa0185390 | Msa0386270 | 0.805875 | 1.080556e-49 | -8.615850e-47 |
| Msa0185550 | Msa0386270 | 0.805284 | 1.437728e-49 | -8.615850e-47 |
| Msa0185700 | Msa0386270 | 0.844525 | 7.163031e-59 | -8.615850e-47 |
| Msa0194570 | Msa0386270 | 0.848563 | 5.660069e-60 | -8.615850e-47 |
| Msa0197900 | Msa0386270 | 0.839571 | 1.463733e-57 | -8.615850e-47 |
| Msa0207000 | Msa0386270 | 0.807209 | 5.653364e-50 | -8.615850e-47 |
| Msa0207180 | Msa0386270 | 0.818343 | 2.060230e-52 | -8.615850e-47 |
| Msa0217470 | Msa0386270 | 0.826865 | 2.145735e-54 | -8.615850e-47 |
| Msa0223280 | Msa0386270 | 0.811319 | 7.430399e-51 | -8.615850e-47 |
| Msa0223390 | Msa0386270 | 0.825458 | 4.636113e-54 | -8.615850e-47 |
| Msa0227490 | Msa0386270 | 0.811867 | 5.647210e-51 | -8.615850e-47 |
| Msa0227500 | Msa0386270 | 0.814671 | 1.368317e-51 | -8.615850e-47 |
| Msa0230400 | Msa0386270 | 0.832203 | 1.081065e-55 | -8.615850e-47 |
| Msa0367370 | Msa0386270 | 0.837603 | 4.715030e-57 | -8.615850e-47 |
| Msa0380420 | Msa0386270 | 0.811214 | 7.831368e-51 | -8.615850e-47 |
| Msa0382500 | Msa0386270 | 0.803424 | 3.509413e-49 | -8.615850e-47 |
| Msa0382560 | Msa0386270 | 0.827209 | 1.775588e-54 | -8.615850e-47 |
| Msa0386270 | Msa0413180 | 0.842045 | 3.285044e-58 | -8.615850e-47 |
| Msa0386270 | Msa0415050 | 0.806081 | 9.782470e-50 | -8.615850e-47 |
| Msa0386270 | Msa0417630 | 0.809667 | 1.689496e-50 | -8.615850e-47 |
| Msa0386270 | Msa0429270 | 0.801578 | 8.428955e-49 | -8.615850e-47 |
| Msa0386270 | Msa0432680 | 0.805071 | 1.593064e-49 | -8.615850e-47 |
| Msa0386270 | Msa0436090 | 0.974769 | 9.618360e-139 | -8.615850e-47 |
| Msa0386270 | Msa0446480 | 0.802585 | 5.230856e-49 | -8.615850e-47 |
| Msa0386270 | Msa0450050 | 0.806077 | 9.800199e-50 | -8.615850e-47 |
| Msa0386270 | Msa0458110 | 0.817830 | 2.690711e-52 | -8.615850e-47 |
| Msa0386270 | Msa0472380 | 0.801421 | 9.074634e-49 | -8.615850e-47 |
| Msa0386270 | Msa0476150 | 0.805421 | 1.345581e-49 | -8.615850e-47 |
| Msa0386270 | Msa0476180 | 0.800882 | 1.169734e-48 | -8.615850e-47 |
| Msa0386270 | Msa0504730 | 0.829051 | 6.390927e-55 | -8.615850e-47 |
| Msa0386270 | Msa0506760 | 0.973703 | 7.035657e-137 | -8.615850e-47 |
| Msa0386270 | Msa0511870 | 0.841559 | 4.416707e-58 | -8.615850e-47 |
| Msa0386270 | Msa0524090 | 0.817860 | 2.648892e-52 | -8.615850e-47 |
| Msa0386270 | Msa0524120 | 0.816249 | 6.095422e-52 | -8.615850e-47 |
| Msa0386270 | Msa0524230 | 0.823521 | 1.324205e-53 | -8.615850e-47 |
| Msa0386270 | Msa0527600 | 0.817700 | 2.878316e-52 | -8.615850e-47 |
| Msa0386270 | Msa0532840 | 0.839792 | 1.281598e-57 | -8.615850e-47 |
| Msa0386270 | Msa0533010 | 0.829885 | 4.006204e-55 | -8.615850e-47 |
| Msa0386270 | Msa0542010 | 0.802350 | 5.848588e-49 | -8.615850e-47 |
| Msa0386270 | Msa0546380 | 0.804117 | 2.520000e-49 | -8.615850e-47 |
| Msa0386270 | Msa0546740 | 0.806397 | 8.389887e-50 | -8.615850e-47 |
| Msa0386270 | Msa0546840 | 0.824813 | 6.584929e-54 | -8.615850e-47 |
| Msa0386270 | Msa0555940 | 0.820348 | 7.193014e-53 | -8.615850e-47 |
| Msa0386270 | Msa0563530 | 0.807560 | 4.762079e-50 | -8.615850e-47 |
| Msa0386270 | Msa0567290 | 0.852674 | 3.953555e-61 | -8.615850e-47 |
| Msa0386270 | Msa0574170 | 0.838478 | 2.808920e-57 | -8.615850e-47 |
| Msa0386270 | Msa0575250 | 0.814741 | 1.320254e-51 | -8.615850e-47 |
| Msa0386270 | Msa0576420 | 0.845081 | 5.073067e-59 | -8.615850e-47 |
| Msa0386270 | Msa0578900 | 0.859191 | 4.905583e-63 | -8.615850e-47 |
| Msa0386270 | Msa0581460 | 0.814341 | 1.618655e-51 | -8.615850e-47 |
| Msa0386270 | Msa0594390 | 0.810238 | 1.273042e-50 | -8.615850e-47 |
| Msa0386270 | Msa0600390 | 0.810561 | 1.084406e-50 | -8.615850e-47 |
| Msa0386270 | Msa0605620 | 0.809417 | 1.911582e-50 | -8.615850e-47 |
| Msa0386270 | Msa0607300 | 0.819263 | 1.273221e-52 | -8.615850e-47 |
| Msa0386270 | Msa0610860 | 0.849354 | 3.411965e-60 | -8.615850e-47 |
| Msa0386270 | Msa0619330 | 0.824089 | 9.750398e-54 | -8.615850e-47 |
| Msa0386270 | Msa0629290 | 0.827719 | 1.339482e-54 | -8.615850e-47 |
| Msa0386270 | Msa0639370 | 0.885342 | 8.835422e-72 | -8.615850e-47 |
| Msa0386270 | Msa0640880 | 0.819070 | 1.408796e-52 | -8.615850e-47 |
| Msa0386270 | Msa0642650 | 0.818594 | 1.806468e-52 | -8.615850e-47 |
| Msa0386270 | Msa0651350 | 0.855181 | 7.493765e-62 | -8.615850e-47 |
| Msa0386270 | Msa0661470 | 0.973587 | 1.109586e-136 | -8.615850e-47 |
| Msa0386270 | Msa0667120 | 0.836778 | 7.664843e-57 | -8.615850e-47 |
| Msa0386270 | Msa0667970 | 0.835004 | 2.159143e-56 | -8.615850e-47 |
| Msa0386270 | Msa0681890 | 0.814042 | 1.884280e-51 | -8.615850e-47 |
| Msa0386270 | Msa0682400 | 0.812007 | 5.265667e-51 | -8.615850e-47 |
| Msa0386270 | Msa0682460 | 0.875421 | 3.123321e-68 | -8.615850e-47 |
| Msa0386270 | Msa0683650 | 0.805093 | 1.576875e-49 | -8.615850e-47 |
| Msa0386270 | Msa0685540 | 0.812551 | 4.004371e-51 | -8.615850e-47 |
| Msa0386270 | Msa0689400 | 0.807155 | 5.802162e-50 | -8.615850e-47 |
| Msa0386270 | Msa0690350 | 0.819289 | 1.255926e-52 | -8.615850e-47 |
| Msa0386270 | Msa0693570 | 0.809547 | 1.793134e-50 | -8.615850e-47 |
| Msa0386270 | Msa0703720 | 0.802850 | 4.613625e-49 | -8.615850e-47 |
| Msa0386270 | Msa0703760 | 0.850182 | 2.003908e-60 | -8.615850e-47 |
| Msa0386270 | Msa0707780 | 0.852725 | 3.822412e-61 | -8.615850e-47 |
| Msa0386270 | Msa0709480 | 0.838059 | 3.600609e-57 | -8.615850e-47 |
| Msa0386270 | Msa0720270 | 0.810302 | 1.233483e-50 | -8.615850e-47 |
| Msa0386270 | Msa0730180 | 0.835664 | 1.471355e-56 | -8.615850e-47 |
| Msa0386270 | Msa0746600 | 0.816013 | 6.881091e-52 | -8.615850e-47 |
| Msa0386270 | Msa0761790 | 0.815261 | 1.011963e-51 | -8.615850e-47 |
| Msa0386270 | Msa0764020 | 0.806879 | 6.639538e-50 | -8.615850e-47 |
| Msa0386270 | Msa0770430 | 0.814236 | 1.707026e-51 | -8.615850e-47 |
| Msa0386270 | Msa0776480 | 0.805263 | 1.452651e-49 | -8.615850e-47 |
| Msa0386270 | Msa0780140 | 0.804916 | 1.716390e-49 | -8.615850e-47 |
| Msa0386270 | Msa0790180 | 0.826295 | 2.933510e-54 | -8.615850e-47 |
| Msa0386270 | Msa0790830 | 0.826398 | 2.773395e-54 | -8.615850e-47 |
| Msa0386270 | Msa0802210 | 0.816461 | 5.465665e-52 | -8.615850e-47 |
| Msa0386270 | Msa0803130 | 0.817309 | 3.525287e-52 | -8.615850e-47 |
| Msa0386270 | Msa0804110 | 0.837786 | 4.231607e-57 | -8.615850e-47 |
| Msa0386270 | Msa0805940 | 0.863465 | 2.442231e-64 | -8.615850e-47 |
| Msa0386270 | Msa0808420 | 0.833654 | 4.709731e-56 | -8.615850e-47 |
| Msa0386270 | Msa0824140 | 0.831195 | 1.915773e-55 | -8.615850e-47 |
| Msa0386270 | Msa0841490 | 0.812534 | 4.039837e-51 | -8.615850e-47 |
| Msa0386270 | Msa0842220 | 0.800689 | 1.280955e-48 | -8.615850e-47 |
| Msa0386270 | Msa0843690 | 0.845919 | 3.006596e-59 | -8.615850e-47 |
| Msa0386270 | Msa0848360 | 0.804040 | 2.614352e-49 | -8.615850e-47 |
| Msa0386270 | Msa0863250 | 0.824171 | 9.325242e-54 | -8.615850e-47 |
| Msa0386270 | Msa0864150 | 0.829109 | 6.187133e-55 | -8.615850e-47 |
| Msa0386270 | Msa0867340 | 0.814496 | 1.495895e-51 | -8.615850e-47 |
| Msa0386270 | Msa0898720 | 0.801531 | 8.617382e-49 | -8.615850e-47 |
| Msa0386270 | Msa0925160 | 0.826173 | 3.137787e-54 | -8.615850e-47 |
| Msa0386270 | Msa0930330 | 0.841547 | 4.446888e-58 | -8.615850e-47 |
| Msa0386270 | Msa0931480 | 0.803858 | 2.852586e-49 | -8.615850e-47 |
| Msa0386270 | Msa0938970 | 0.803886 | 2.814401e-49 | -8.615850e-47 |
| Msa0386270 | Msa0955260 | 0.819140 | 1.358224e-52 | -8.615850e-47 |
| Msa0386270 | Msa0990520 | 0.801086 | 1.062709e-48 | -8.615850e-47 |
| Msa0386270 | Msa1004500 | 0.831761 | 1.390031e-55 | -8.615850e-47 |
| Msa0386270 | Msa1004520 | 0.816564 | 5.181585e-52 | -8.615850e-47 |
| Msa0386270 | Msa1009790 | 0.813526 | 2.448578e-51 | -8.615850e-47 |
| Msa0386270 | Msa1011210 | 0.816990 | 4.159595e-52 | -8.615850e-47 |
| Msa0386270 | Msa1011240 | 0.823307 | 1.486250e-53 | -8.615850e-47 |
| Msa0386270 | Msa1018790 | 0.823936 | 1.059017e-53 | -8.615850e-47 |
| Msa0386270 | Msa1027790 | 0.819099 | 1.387579e-52 | -8.615850e-47 |
| Msa0386270 | Msa1028460 | 0.844286 | 8.306803e-59 | -8.615850e-47 |
| Msa0386270 | Msa1032140 | 0.804774 | 1.838071e-49 | -8.615850e-47 |
| Msa0386270 | Msa1033960 | 0.806309 | 8.759185e-50 | -8.615850e-47 |
| Msa0386270 | Msa1045880 | 0.807679 | 4.492079e-50 | -8.615850e-47 |
| Msa0386270 | Msa1045970 | 0.803209 | 3.888953e-49 | -8.615850e-47 |
| Msa0386270 | Msa1046870 | 0.835242 | 1.880668e-56 | -8.615850e-47 |
| Msa0386270 | Msa1061180 | 0.812209 | 4.756829e-51 | -8.615850e-47 |
| Msa0386270 | Msa1067430 | 0.811657 | 6.274123e-51 | -8.615850e-47 |
| Msa0386270 | Msa1072080 | 0.841815 | 3.780226e-58 | -8.615850e-47 |
| Msa0386270 | Msa1080620 | 0.813193 | 2.896728e-51 | -8.615850e-47 |
| Msa0386270 | Msa1080690 | 0.801665 | 8.087568e-49 | -8.615850e-47 |
| Msa0386270 | Msa1084490 | 0.836529 | 8.872705e-57 | -8.615850e-47 |
| Msa0386270 | Msa1087500 | 0.803939 | 2.744163e-49 | -8.615850e-47 |
| Msa0386270 | Msa1097850 | 0.817540 | 3.126921e-52 | -8.615850e-47 |
| Msa0386270 | Msa1103670 | 0.812762 | 3.600627e-51 | -8.615850e-47 |
| Msa0386270 | Msa1105290 | 0.816721 | 4.777949e-52 | -8.615850e-47 |
| Msa0386270 | Msa1106560 | 0.828887 | 7.002205e-55 | -8.615850e-47 |
| Msa0386270 | Msa1107970 | 0.801167 | 1.023223e-48 | -8.615850e-47 |
| Msa0386270 | Msa1112610 | 0.818387 | 2.012734e-52 | -8.615850e-47 |
| Msa0386270 | Msa1122160 | 0.804659 | 1.942183e-49 | -8.615850e-47 |
| Msa0386270 | Msa1125780 | 0.840796 | 7.007857e-58 | -8.615850e-47 |
| Msa0386270 | Msa1125950 | 0.841885 | 3.621525e-58 | -8.615850e-47 |
| Msa0386270 | Msa1126310 | 0.806849 | 6.737118e-50 | -8.615850e-47 |
| Msa0386270 | Msa1129560 | 0.816679 | 4.882645e-52 | -8.615850e-47 |
| Msa0386270 | Msa1129720 | 0.835135 | 2.000726e-56 | -8.615850e-47 |
| Msa0386270 | Msa1134400 | 0.826338 | 2.865686e-54 | -8.615850e-47 |
| Msa0386270 | Msa1147270 | 0.820803 | 5.654352e-53 | -8.615850e-47 |
| Msa0386270 | Msa1148780 | 0.812477 | 4.157223e-51 | -8.615850e-47 |
| Msa0386270 | Msa1149760 | 0.815851 | 7.480917e-52 | -8.615850e-47 |
| Msa0386270 | Msa1159100 | 0.833620 | 4.802480e-56 | -8.615850e-47 |
| Msa0386270 | Msa1159990 | 0.819762 | 9.797594e-53 | -8.615850e-47 |
| Msa0386270 | Msa1166180 | 0.825988 | 3.470526e-54 | -8.615850e-47 |
| Msa0386270 | Msa1166280 | 0.825398 | 4.791583e-54 | -8.615850e-47 |
| Msa0386270 | Msa1167160 | 0.822565 | 2.212855e-53 | -8.615850e-47 |
| Msa0386270 | Msa1171340 | 0.840963 | 6.333512e-58 | -8.615850e-47 |
| Msa0386270 | Msa1175750 | 0.809125 | 2.207997e-50 | -8.615850e-47 |
| Msa0386270 | Msa1183390 | 0.836229 | 1.057316e-56 | -8.615850e-47 |
| Msa0386270 | Msa1183610 | 0.812673 | 3.765686e-51 | -8.615850e-47 |
| Msa0386270 | Msa1186210 | 0.816092 | 6.607268e-52 | -8.615850e-47 |
| Msa0386270 | Msa1197110 | 0.828104 | 1.082454e-54 | -8.615850e-47 |
| Msa0386270 | Msa1200920 | 0.808760 | 2.643137e-50 | -8.615850e-47 |
| Msa0386270 | Msa1209150 | 0.807801 | 4.233496e-50 | -8.615850e-47 |
| Msa0386270 | Msa1210640 | 0.806007 | 1.013750e-49 | -8.615850e-47 |
| Msa0386270 | Msa1210770 | 0.810336 | 1.212673e-50 | -8.615850e-47 |
| Msa0386270 | Msa1211040 | 0.808041 | 3.763651e-50 | -8.615850e-47 |
| Msa0386270 | Msa1219250 | 0.833833 | 4.248767e-56 | -8.615850e-47 |
| Msa0386270 | Msa1226360 | 0.818661 | 1.744966e-52 | -8.615850e-47 |
| Msa0386270 | Msa1228950 | 0.800059 | 1.721523e-48 | -8.615850e-47 |
| Msa0386270 | Msa1229050 | 0.828227 | 1.010817e-54 | -8.615850e-47 |
| Msa0386270 | Msa1229690 | 0.819158 | 1.344891e-52 | -8.615850e-47 |
| Msa0386270 | Msa1235890 | 0.836416 | 9.477339e-57 | -8.615850e-47 |
| Msa0386270 | Msa1238710 | 0.800664 | 1.295857e-48 | -8.615850e-47 |
| Msa0386270 | Msa1250670 | 0.809762 | 1.612357e-50 | -8.615850e-47 |
| Msa0386270 | Msa1254770 | 0.800641 | 1.310494e-48 | -8.615850e-47 |
| Msa0386270 | Msa1254800 | 0.801999 | 6.906237e-49 | -8.615850e-47 |
| Msa0386270 | Msa1259470 | 0.833244 | 5.960687e-56 | -8.615850e-47 |
| Msa0386270 | Msa1262310 | 0.807734 | 4.374065e-50 | -8.615850e-47 |
| Msa0386270 | Msa1271490 | 0.827552 | 1.469080e-54 | -8.615850e-47 |
| Msa0386270 | Msa1271510 | 0.845758 | 3.324841e-59 | -8.615850e-47 |
| Msa0386270 | Msa1271600 | 0.838366 | 3.000720e-57 | -8.615850e-47 |
| Msa0386270 | Msa1274740 | 0.818161 | 2.264784e-52 | -8.615850e-47 |
| Msa0386270 | Msa1280120 | 0.807365 | 5.238420e-50 | -8.615850e-47 |
| Msa0386270 | Msa1293530 | 0.805256 | 1.457069e-49 | -8.615850e-47 |
| Msa0386270 | Msa1299160 | 0.808302 | 3.311247e-50 | -8.615850e-47 |
| Msa0386270 | Msa1302150 | 0.808894 | 2.474614e-50 | -8.615850e-47 |
| Msa0386270 | Msa1303750 | 0.843788 | 1.129382e-58 | -8.615850e-47 |
| Msa0386270 | Msa1303810 | 0.837170 | 6.087849e-57 | -8.615850e-47 |
| Msa0386270 | Msa1305520 | 0.821268 | 4.419325e-53 | -8.615850e-47 |
| Msa0386270 | Msa1307370 | 0.816321 | 5.872511e-52 | -8.615850e-47 |
| Msa0386270 | Msa1309360 | 0.835275 | 1.845153e-56 | -8.615850e-47 |
| Msa0386270 | Msa1312730 | 0.827422 | 1.578267e-54 | -8.615850e-47 |
| Msa0386270 | Msa1315980 | 0.832209 | 1.076866e-55 | -8.615850e-47 |
| Msa0386270 | Msa1317030 | 0.807063 | 6.070732e-50 | -8.615850e-47 |
| Msa0386270 | Msa1325980 | 0.806680 | 7.311601e-50 | -8.615850e-47 |
| Msa0386270 | Msa1344430 | 0.801825 | 7.499740e-49 | -8.615850e-47 |
| Msa0386270 | Msa1352290 | 0.815272 | 1.006287e-51 | -8.615850e-47 |
| Msa0386270 | Msa1354040 | 0.848807 | 4.844626e-60 | -8.615850e-47 |
| Msa0386270 | Msa1363080 | 0.842315 | 2.787878e-58 | -8.615850e-47 |
| Msa0386270 | Msa1365000 | 0.818970 | 1.484724e-52 | -8.615850e-47 |
| Msa0386270 | Msa1365320 | 0.824412 | 8.184945e-54 | -8.615850e-47 |
| Msa0386270 | Msa1365640 | -0.819647 | 1.040615e-52 | -8.615850e-47 |
| Msa0386270 | Msa1365870 | 0.828145 | 1.058083e-54 | -8.615850e-47 |
| Msa0386270 | Msa1367430 | 0.823502 | 1.338013e-53 | -8.615850e-47 |
| Msa0386270 | Msa1367600 | 0.840681 | 7.509664e-58 | -8.615850e-47 |
| Msa0386270 | Msa1375630 | 0.810927 | 9.037914e-51 | -8.615850e-47 |
| Msa0386270 | Msa1376400 | 0.828817 | 7.281289e-55 | -8.615850e-47 |
| Msa0386270 | Msa1376530 | 0.807120 | 5.901702e-50 | -8.615850e-47 |
| Msa0386270 | Msa1376640 | 0.820696 | 5.983943e-53 | -8.615850e-47 |
| Msa0386270 | Msa1379990 | 0.801631 | 8.221078e-49 | -8.615850e-47 |
| Msa0386270 | Msa1385900 | 0.810984 | 8.781865e-51 | -8.615850e-47 |
| Msa0386270 | Msa1391590 | 0.809290 | 2.035362e-50 | -8.615850e-47 |
| Msa0386270 | Msa1398480 | 0.843395 | 1.438421e-58 | -8.615850e-47 |
| Msa0386270 | Msa1404370 | 0.824513 | 7.751341e-54 | -8.615850e-47 |
| Msa0386270 | Msa1405770 | 0.803103 | 4.090164e-49 | -8.615850e-47 |
| Msa0386270 | Msa1407710 | 0.857617 | 1.444786e-62 | -8.615850e-47 |
| Msa0386270 | Msa1408770 | 0.809222 | 2.105047e-50 | -8.615850e-47 |
| Msa0386270 | Msa1410170 | 0.826535 | 2.572134e-54 | -8.615850e-47 |
| Msa0386270 | Msa1412520 | 0.820534 | 6.519062e-53 | -8.615850e-47 |
| Msa0386270 | Msa1415250 | 0.805590 | 1.240263e-49 | -8.615850e-47 |
| Msa0386270 | Msa1417630 | 0.803064 | 4.166566e-49 | -8.615850e-47 |
| Msa0386270 | Msa1418200 | 0.803634 | 3.174118e-49 | -8.615850e-47 |
| Msa0386270 | Msa1419850 | 0.808319 | 3.282708e-50 | -8.615850e-47 |
| Msa0386270 | Msa1424240 | 0.802658 | 5.053200e-49 | -8.615850e-47 |
| Msa0386270 | Msa1428420 | 0.815806 | 7.655129e-52 | -8.615850e-47 |
| Msa0386270 | Msa1429830 | 0.815542 | 8.763308e-52 | -8.615850e-47 |
| Msa0386270 | Msa1430270 | 0.857232 | 1.878184e-62 | -8.615850e-47 |
| Msa0386270 | Msa1435040 | 0.800555 | 1.364452e-48 | -8.615850e-47 |
| Msa0386270 | Msa1435580 | 0.828425 | 9.052906e-55 | -8.615850e-47 |
| Msa0386270 | Msa1435670 | 0.804654 | 1.947773e-49 | -8.615850e-47 |
| Msa0386270 | Msa1438360 | 0.975630 | 2.631395e-140 | -8.615850e-47 |
| Msa0386270 | Msa1439670 | 0.829606 | 4.684682e-55 | -8.615850e-47 |
| Msa0386270 | Msa1447230 | 0.817781 | 2.760427e-52 | -8.615850e-47 |
| Msa0239660 | Msa0386270 | 0.819058 | 1.417136e-52 | -8.615850e-47 |
| Msa0246690 | Msa0386270 | 0.807694 | 4.459231e-50 | -8.615850e-47 |
| Msa0247310 | Msa0386270 | 0.807407 | 5.132602e-50 | -8.615850e-47 |
| Msa0255990 | Msa0386270 | 0.809641 | 1.711756e-50 | -8.615850e-47 |
| Msa0257130 | Msa0386270 | 0.804171 | 2.454966e-49 | -8.615850e-47 |
| Msa0257310 | Msa0386270 | 0.817024 | 4.085506e-52 | -8.615850e-47 |
| Msa0258380 | Msa0386270 | 0.818137 | 2.293222e-52 | -8.615850e-47 |
| Msa0259980 | Msa0386270 | 0.820208 | 7.745045e-53 | -8.615850e-47 |
| Msa0274780 | Msa0386270 | 0.838038 | 3.646686e-57 | -8.615850e-47 |
| Msa0277640 | Msa0386270 | 0.834361 | 3.133159e-56 | -8.615850e-47 |
| Msa0285740 | Msa0386270 | 0.823552 | 1.302385e-53 | -8.615850e-47 |
| Msa0289780 | Msa0386270 | 0.812850 | 3.445364e-51 | -8.615850e-47 |
| Msa0296610 | Msa0386270 | 0.823622 | 1.254552e-53 | -8.615850e-47 |
| Msa0298940 | Msa0386270 | 0.816295 | 5.953982e-52 | -8.615850e-47 |
| Msa0298970 | Msa0386270 | 0.839524 | 1.505282e-57 | -8.615850e-47 |
| Msa0301180 | Msa0386270 | 0.815126 | 1.084559e-51 | -8.615850e-47 |
| Msa0302660 | Msa0386270 | 0.811074 | 8.397276e-51 | -8.615850e-47 |
| Msa0314790 | Msa0386270 | 0.856914 | 2.330367e-62 | -8.615850e-47 |
| Msa0315480 | Msa0386270 | 0.828639 | 8.038951e-55 | -8.615850e-47 |
| Msa0317260 | Msa0386270 | 0.838655 | 2.527704e-57 | -8.615850e-47 |
| Msa0320540 | Msa0386270 | 0.820107 | 8.169286e-53 | -8.615850e-47 |
| Msa0323990 | Msa0386270 | 0.833830 | 4.257239e-56 | -8.615850e-47 |
| Msa0324010 | Msa0386270 | 0.821054 | 4.951084e-53 | -8.615850e-47 |
| Msa0327550 | Msa0386270 | 0.807182 | 5.727439e-50 | -8.615850e-47 |
| Msa0331780 | Msa0386270 | 0.804680 | 1.922689e-49 | -8.615850e-47 |
| Msa0339860 | Msa0386270 | 0.835699 | 1.441473e-56 | -8.615850e-47 |
| Msa0344070 | Msa0386270 | 0.816691 | 4.853015e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0386270 | MtrunA17_Chr3g0144231 | 98.876 | 178 | 2 | 0 | 1 | 178 | 1 | 178 | 1.74e-130 | 363 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0386270 | AT1G76405.2 | 51.685 | 178 | 75 | 1 | 1 | 178 | 1 | 167 | 5.17e-68 | 204 |
| Msa0386270 | AT1G20816.1 | 55.056 | 178 | 69 | 1 | 1 | 178 | 1 | 167 | 1.67e-67 | 203 |
| Msa0386270 | AT1G76405.1 | 50.000 | 56 | 28 | 0 | 1 | 56 | 1 | 56 | 4.39e-17 | 72.0 |
Find 49 sgRNAs with CRISPR-Local
Find 185 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTGTTAACTTCAAAATTA+AGG | 0.130885 | 3_1:+90044212 | Msa0386270:CDS |
| ACGAGGGCACGCAAAGAATT+AGG | 0.268380 | 3_1:-90043927 | None:intergenic |
| CTTAGATGAGGCTTAGGGTT+GGG | 0.274478 | 3_1:-90046088 | None:intergenic |
| CTTGTTAACTTCAAAATTAA+GGG | 0.310936 | 3_1:+90044213 | Msa0386270:CDS |
| TTAGATGAGGCTTAGGGTTG+GGG | 0.312711 | 3_1:-90046087 | None:intergenic |
| AGGTTCCTTATGTGCAGATT+AGG | 0.316574 | 3_1:+90045931 | Msa0386270:intron |
| TGCAGATTAGGGAGAATAAT+TGG | 0.319583 | 3_1:+90045943 | Msa0386270:CDS |
| CCAAATTTAAAATGTATTCA+TGG | 0.337210 | 3_1:-90046119 | None:intergenic |
| TAGAATTCTTAACCGCAAAA+TGG | 0.344605 | 3_1:+90046212 | Msa0386270:three_prime_UTR |
| TACACAAATTAATCTGTTAT+CGG | 0.348741 | 3_1:-90046236 | None:intergenic |
| CCTCTACTTAGATGAGGCTT+AGG | 0.357289 | 3_1:-90046094 | None:intergenic |
| TCACTTCTACTATTATCTTC+TGG | 0.360989 | 3_1:+90043688 | Msa0386270:five_prime_UTR |
| ATAGTACCTCCTTAAAATCT+TGG | 0.365451 | 3_1:-90044251 | None:intergenic |
| GGTTCCTTATGTGCAGATTA+GGG | 0.369973 | 3_1:+90045932 | Msa0386270:intron |
| CGACACCAATACCTTCTTCC+AGG | 0.391747 | 3_1:+90043790 | Msa0386270:CDS |
| ATGGAGACATCTCTGCGATA+TGG | 0.406246 | 3_1:+90043719 | Msa0386270:CDS |
| GAAGTTAACAAGACCATCTT+CGG | 0.418600 | 3_1:-90044202 | None:intergenic |
| TGGCTATGAAGCTATTGAAC+AGG | 0.420836 | 3_1:+90044431 | Msa0386270:CDS |
| ATGCAGACTACAAAGGTAGA+TGG | 0.424259 | 3_1:+90045973 | Msa0386270:CDS |
| TTCTCCCTAATCTGCACATA+AGG | 0.440186 | 3_1:-90045936 | None:intergenic |
| TGAAAACTCAGCTCCTCCTC+TGG | 0.449354 | 3_1:-90044361 | None:intergenic |
| CAAGATGTTAGACTCAGAAT+TGG | 0.460040 | 3_1:+90044411 | Msa0386270:CDS |
| CTCTACTTAGATGAGGCTTA+GGG | 0.465411 | 3_1:-90046093 | None:intergenic |
| ACTTAGATGAGGCTTAGGGT+TGG | 0.470779 | 3_1:-90046089 | None:intergenic |
| TATGATAAACTTAACAATGT+TGG | 0.478350 | 3_1:+90044111 | Msa0386270:CDS |
| CAATTCTGAGTCTAACATCT+TGG | 0.479633 | 3_1:-90044410 | None:intergenic |
| CATTAAATTGAAGTGCAATA+CGG | 0.483730 | 3_1:+90046143 | Msa0386270:three_prime_UTR |
| ACACAAATTAATCTGTTATC+GGG | 0.487883 | 3_1:-90046235 | None:intergenic |
| AAAATCTTGGTCAACATCAC+AGG | 0.522085 | 3_1:-90044238 | None:intergenic |
| CCTAAGCCTCATCTAAGTAG+AGG | 0.525734 | 3_1:+90046094 | Msa0386270:three_prime_UTR |
| TCAACCACTTGAATTACGCC+GGG | 0.528669 | 3_1:-90046326 | None:intergenic |
| AAATGTGATTACCTGGAAGA+AGG | 0.550658 | 3_1:-90043801 | None:intergenic |
| TTGTAGTTATCAGCCACGCT+TGG | 0.552067 | 3_1:+90044075 | Msa0386270:intron |
| CTCAACCACTTGAATTACGC+CGG | 0.556128 | 3_1:-90046327 | None:intergenic |
| TTATCAGCCACGCTTGGTGT+AGG | 0.569861 | 3_1:+90044081 | Msa0386270:CDS |
| TAGATGAGGCTTAGGGTTGG+GGG | 0.579677 | 3_1:-90046086 | None:intergenic |
| TGTTATCCCAACAAGGTTCG+CGG | 0.581115 | 3_1:+90043879 | Msa0386270:intron |
| GATTACCTGGAAGAAGGTAT+TGG | 0.592385 | 3_1:-90043795 | None:intergenic |
| CTAAGCCTCATCTAAGTAGA+GGG | 0.593097 | 3_1:+90046095 | Msa0386270:three_prime_UTR |
| ATGGTCCCTCTACTTAGATG+AGG | 0.601077 | 3_1:-90046100 | None:intergenic |
| CATCCCCGGCGTAATTCAAG+TGG | 0.603117 | 3_1:+90046322 | Msa0386270:three_prime_UTR |
| GAGACATCTCTGCGATATGG+AGG | 0.610703 | 3_1:+90043722 | Msa0386270:CDS |
| TTGTAGAGGAAATCCAGAGG+AGG | 0.623791 | 3_1:+90044348 | Msa0386270:intron |
| CTGGATAGAAATGTCGAACG+AGG | 0.632953 | 3_1:-90043944 | None:intergenic |
| ACGATATGACATTACATCCC+CGG | 0.636528 | 3_1:+90046308 | Msa0386270:three_prime_UTR |
| ACATTTAATGCAGACTACAA+AGG | 0.641965 | 3_1:+90045966 | Msa0386270:CDS |
| TTGCACTCCTACACCAAGCG+TGG | 0.667569 | 3_1:-90044088 | None:intergenic |
| TGGATAGAAATGTCGAACGA+GGG | 0.694230 | 3_1:-90043943 | None:intergenic |
| CAACCACTTGAATTACGCCG+GGG | 0.728751 | 3_1:-90046325 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTTGTAG+AGG | + | chr3_1:90044334-90044353 | Msa0386270:intron | 10.0% |
| !! | TTAAGTTCTTAAAAATATAA+TGG | - | chr3_1:90044653-90044672 | None:intergenic | 10.0% |
| !! | AATGTAATAAAAAGAAAATA+GGG | - | chr3_1:90045283-90045302 | None:intergenic | 10.0% |
| !! | GAATTATAAATAGAAAAGAT+TGG | - | chr3_1:90043829-90043848 | None:intergenic | 15.0% |
| !! | TTAATTGATTAATACTTGTT+TGG | + | chr3_1:90044037-90044056 | Msa0386270:intron | 15.0% |
| !! | TAATTGATTAATACTTGTTT+GGG | + | chr3_1:90044038-90044057 | Msa0386270:intron | 15.0% |
| !!! | TATTTATATTTCTGTAAAGT+AGG | + | chr3_1:90044742-90044761 | Msa0386270:intron | 15.0% |
| !!! | GTTTTTAAAAGTTTAGAATT+GGG | - | chr3_1:90044874-90044893 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTCTTCCTATATA+TGG | - | chr3_1:90045111-90045130 | None:intergenic | 15.0% |
| !! | ATGTAATAAAAAGAAAATAG+GGG | - | chr3_1:90045282-90045301 | None:intergenic | 15.0% |
| !! | GAATGTAATAAAAAGAAAAT+AGG | - | chr3_1:90045284-90045303 | None:intergenic | 15.0% |
| !!! | AATTTAACATTTTTTCAACT+TGG | - | chr3_1:90045410-90045429 | None:intergenic | 15.0% |
| !! | AAAATAGTCAATAAAATGAT+TGG | - | chr3_1:90045783-90045802 | None:intergenic | 15.0% |
| !! | TTATCTTCTGGATAAAAAAA+TGG | + | chr3_1:90043700-90043719 | Msa0386270:exon | 20.0% |
| !! | TATGATAAACTTAACAATGT+TGG | + | chr3_1:90044111-90044130 | Msa0386270:CDS | 20.0% |
| !! | TCTTGTTAACTTCAAAATTA+AGG | + | chr3_1:90044212-90044231 | Msa0386270:CDS | 20.0% |
| !! | CTTGTTAACTTCAAAATTAA+GGG | + | chr3_1:90044213-90044232 | Msa0386270:CDS | 20.0% |
| !! | ATTAAATTTCACAAAATGAG+TGG | - | chr3_1:90044292-90044311 | None:intergenic | 20.0% |
| !! | ATTGGATTATATAGATATCA+AGG | + | chr3_1:90044607-90044626 | Msa0386270:intron | 20.0% |
| !! | TTGGATTATATAGATATCAA+GGG | + | chr3_1:90044608-90044627 | Msa0386270:intron | 20.0% |
| !! | TAAAAATATAATGGCATTGT+AGG | - | chr3_1:90044644-90044663 | None:intergenic | 20.0% |
| !!! | ACCTAAGAATTGATTTTTAA+TGG | + | chr3_1:90044776-90044795 | Msa0386270:intron | 20.0% |
| !! | ACCATTAAAAATCAATTCTT+AGG | - | chr3_1:90044780-90044799 | None:intergenic | 20.0% |
| !!! | GATTTTTAATGGTTAAGAAT+CGG | + | chr3_1:90044787-90044806 | Msa0386270:intron | 20.0% |
| !!! | GGTTTTTAAAAGTTTAGAAT+TGG | - | chr3_1:90044875-90044894 | None:intergenic | 20.0% |
| !! | ATTAAAGGGATCAAATATAT+AGG | + | chr3_1:90045002-90045021 | Msa0386270:intron | 20.0% |
| !!! | GCATTAAGTATTGAATTTAA+TGG | + | chr3_1:90045511-90045530 | Msa0386270:intron | 20.0% |
| !!! | TTAAGTATTGAATTTAATGG+AGG | + | chr3_1:90045514-90045533 | Msa0386270:intron | 20.0% |
| !! | AAAGATAAAATGCATTACTA+AGG | - | chr3_1:90045868-90045887 | None:intergenic | 20.0% |
| !!! | CCAAATTTAAAATGTATTCA+TGG | - | chr3_1:90046122-90046141 | None:intergenic | 20.0% |
| !!! | CCATGAATACATTTTAAATT+TGG | + | chr3_1:90046119-90046138 | Msa0386270:three_prime_UTR | 20.0% |
| !! | TACACAAATTAATCTGTTAT+CGG | - | chr3_1:90046239-90046258 | None:intergenic | 20.0% |
| ! | TATTACTAGATACATACATC+TGG | - | chr3_1:90043966-90043985 | None:intergenic | 25.0% |
| !! | GAACATATTCAATTTTCAGA+AGG | + | chr3_1:90044386-90044405 | Msa0386270:CDS | 25.0% |
| !! | TGAACTAATTGCTATTATTC+TGG | + | chr3_1:90044517-90044536 | Msa0386270:intron | 25.0% |
| !! | GAACTAATTGCTATTATTCT+GGG | + | chr3_1:90044518-90044537 | Msa0386270:intron | 25.0% |
| !!! | TACAAAGTTTTGTTAACTAG+CGG | + | chr3_1:90044560-90044579 | Msa0386270:intron | 25.0% |
| !!! | AAAACTTTAAGACCTTCAAA+TGG | + | chr3_1:90044702-90044721 | Msa0386270:intron | 25.0% |
| !!! | AAACTTTTAAAAACCGTCAT+TGG | + | chr3_1:90044880-90044899 | Msa0386270:intron | 25.0% |
| ! | ATAGTACGCAGATAAATTAA+AGG | + | chr3_1:90044987-90045006 | Msa0386270:intron | 25.0% |
| ! | TAGTACGCAGATAAATTAAA+GGG | + | chr3_1:90044988-90045007 | Msa0386270:intron | 25.0% |
| ! | TTCTACCATAAACCATATAT+AGG | + | chr3_1:90045096-90045115 | Msa0386270:intron | 25.0% |
| ! | TTCTTCCTATATATGGTTTA+TGG | - | chr3_1:90045104-90045123 | None:intergenic | 25.0% |
| ! | AGGAAGAAAAAAAAAAACAC+TGG | + | chr3_1:90045116-90045135 | Msa0386270:intron | 25.0% |
| ! | GTAAACTAACAATAACTACA+TGG | - | chr3_1:90045314-90045333 | None:intergenic | 25.0% |
| ! | TGTCCAATATCTATATTTGA+AGG | + | chr3_1:90045489-90045508 | Msa0386270:intron | 25.0% |
| ! | ATGCCTTCAAATATAGATAT+TGG | - | chr3_1:90045495-90045514 | None:intergenic | 25.0% |
| ! | TTTAACAGCAGTTAAATGTA+AGG | - | chr3_1:90045651-90045670 | None:intergenic | 25.0% |
| ! | AACTGCTGTTAAAAAGAATT+TGG | + | chr3_1:90045658-90045677 | Msa0386270:intron | 25.0% |
| ! | AAAAGAATTTGGTCTAAAAG+TGG | + | chr3_1:90045669-90045688 | Msa0386270:intron | 25.0% |
| !!! | GTTTTAAGACAATGAAATCT+TGG | - | chr3_1:90045899-90045918 | None:intergenic | 25.0% |
| ! | CATTAAATTGAAGTGCAATA+CGG | + | chr3_1:90046143-90046162 | Msa0386270:three_prime_UTR | 25.0% |
| ! | ACACAAATTAATCTGTTATC+GGG | - | chr3_1:90046238-90046257 | None:intergenic | 25.0% |
| TCACTTCTACTATTATCTTC+TGG | + | chr3_1:90043688-90043707 | Msa0386270:five_prime_UTR | 30.0% | |
| ATTGGAAAAATGTGATTACC+TGG | - | chr3_1:90043811-90043830 | None:intergenic | 30.0% | |
| TGATTAATACTTGTTTGGGT+TGG | + | chr3_1:90044042-90044061 | Msa0386270:intron | 30.0% | |
| ! | GATTAATACTTGTTTGGGTT+GGG | + | chr3_1:90044043-90044062 | Msa0386270:intron | 30.0% |
| ! | TGATGTTGACCAAGATTTTA+AGG | + | chr3_1:90044242-90044261 | Msa0386270:CDS | 30.0% |
| ATAGTACCTCCTTAAAATCT+TGG | - | chr3_1:90044254-90044273 | None:intergenic | 30.0% | |
| ATTTCACAAAATGAGTGGAT+TGG | - | chr3_1:90044287-90044306 | None:intergenic | 30.0% | |
| TCAACACCGATATAATCTAT+GGG | - | chr3_1:90044469-90044488 | None:intergenic | 30.0% | |
| ! | TATTATTCTGGGAATTCGAT+AGG | + | chr3_1:90044529-90044548 | Msa0386270:intron | 30.0% |
| ATATAATGGCATTGTAGGAT+AGG | - | chr3_1:90044639-90044658 | None:intergenic | 30.0% | |
| ATCAATTCTTAGGTAACATG+TGG | - | chr3_1:90044770-90044789 | None:intergenic | 30.0% | |
| ! | AATCGGTTCTTATACAAGAA+TGG | + | chr3_1:90044804-90044823 | Msa0386270:intron | 30.0% |
| TTATCTGCGTACTATTAACA+AGG | - | chr3_1:90044982-90045001 | None:intergenic | 30.0% | |
| CAGATTACTAAATGTTGCAA+GGG | + | chr3_1:90045190-90045209 | Msa0386270:intron | 30.0% | |
| TTCCAATCATTTCCAATGTA+TGG | + | chr3_1:90045243-90045262 | Msa0386270:intron | 30.0% | |
| TTCCATACATTGGAAATGAT+TGG | - | chr3_1:90045248-90045267 | None:intergenic | 30.0% | |
| ! | TAACTGTCAACTATGGATTT+TGG | + | chr3_1:90045384-90045403 | Msa0386270:intron | 30.0% |
| GTATAGCATTAGCAAACATT+TGG | - | chr3_1:90045460-90045479 | None:intergenic | 30.0% | |
| TAGATATTGGACATGAGTAT+AGG | - | chr3_1:90045482-90045501 | None:intergenic | 30.0% | |
| ! | TTTAATGGAGGCAAGTATTT+TGG | + | chr3_1:90045526-90045545 | Msa0386270:intron | 30.0% |
| ! | TTAATGGAGGCAAGTATTTT+GGG | + | chr3_1:90045527-90045546 | Msa0386270:intron | 30.0% |
| !!! | AGTATTTTGGGATTGAAAAC+TGG | + | chr3_1:90045539-90045558 | Msa0386270:intron | 30.0% |
| !!! | GTTGTCGATTTTTCATTTGT+TGG | + | chr3_1:90045712-90045731 | Msa0386270:intron | 30.0% |
| AGAATAACTCGGCAAAATTA+GGG | - | chr3_1:90045830-90045849 | None:intergenic | 30.0% | |
| AAGAATAACTCGGCAAAATT+AGG | - | chr3_1:90045831-90045850 | None:intergenic | 30.0% | |
| ACACCATGAAAAGAATAACT+CGG | - | chr3_1:90045841-90045860 | None:intergenic | 30.0% | |
| ACATTTAATGCAGACTACAA+AGG | + | chr3_1:90045966-90045985 | Msa0386270:CDS | 30.0% | |
| !!! | ATGTTCTGCTTGTCATTTTT+TGG | + | chr3_1:90046044-90046063 | Msa0386270:three_prime_UTR | 30.0% |
| !!! | TGTTCTGCTTGTCATTTTTT+GGG | + | chr3_1:90046045-90046064 | Msa0386270:three_prime_UTR | 30.0% |
| TAGAATTCTTAACCGCAAAA+TGG | + | chr3_1:90046212-90046231 | Msa0386270:three_prime_UTR | 30.0% | |
| !!! | CGCATGAATTTTTAAGGCTT+TGG | - | chr3_1:90043753-90043772 | None:intergenic | 35.0% |
| ! | CTGCTTCGCATGAATTTTTA+AGG | - | chr3_1:90043759-90043778 | None:intergenic | 35.0% |
| AAATGTGATTACCTGGAAGA+AGG | - | chr3_1:90043804-90043823 | None:intergenic | 35.0% | |
| GAAGTTAACAAGACCATCTT+CGG | - | chr3_1:90044205-90044224 | None:intergenic | 35.0% | |
| AAAATCTTGGTCAACATCAC+AGG | - | chr3_1:90044241-90044260 | None:intergenic | 35.0% | |
| !! | TGTTGACCAAGATTTTAAGG+AGG | + | chr3_1:90044245-90044264 | Msa0386270:CDS | 35.0% |
| ! | TTTTTGTAGAGGAAATCCAG+AGG | + | chr3_1:90044345-90044364 | Msa0386270:intron | 35.0% |
| CAATTCTGAGTCTAACATCT+TGG | - | chr3_1:90044413-90044432 | None:intergenic | 35.0% | |
| CAAGATGTTAGACTCAGAAT+TGG | + | chr3_1:90044411-90044430 | Msa0386270:CDS | 35.0% | |
| TATGCCCCCATAGATTATAT+CGG | + | chr3_1:90044460-90044479 | Msa0386270:intron | 35.0% | |
| AACACCGATATAATCTATGG+GGG | - | chr3_1:90044467-90044486 | None:intergenic | 35.0% | |
| CAACACCGATATAATCTATG+GGG | - | chr3_1:90044468-90044487 | None:intergenic | 35.0% | |
| CTCAACACCGATATAATCTA+TGG | - | chr3_1:90044470-90044489 | None:intergenic | 35.0% | |
| AATTAGTTCAAATCCCGCTA+TGG | - | chr3_1:90044507-90044526 | None:intergenic | 35.0% | |
| AACTTGTCAGATCCATTTGA+AGG | - | chr3_1:90044717-90044736 | None:intergenic | 35.0% | |
| AGGTACTTTCATTATCCTCT+TGG | + | chr3_1:90044837-90044856 | Msa0386270:intron | 35.0% | |
| ! | TTTTTCGCTCACAATAGCTT+AGG | + | chr3_1:90044942-90044961 | Msa0386270:intron | 35.0% |
| GCAGATTACTAAATGTTGCA+AGG | + | chr3_1:90045189-90045208 | Msa0386270:intron | 35.0% | |
| ACATAAGTTAGTTACGCTCT+AGG | + | chr3_1:90045339-90045358 | Msa0386270:intron | 35.0% | |
| CATAAGTTAGTTACGCTCTA+GGG | + | chr3_1:90045340-90045359 | Msa0386270:intron | 35.0% | |
| GTACAAGTAACTGTCAACTA+TGG | + | chr3_1:90045377-90045396 | Msa0386270:intron | 35.0% | |
| TGAAAACTGGAAATTGCTCA+TGG | + | chr3_1:90045552-90045571 | Msa0386270:intron | 35.0% | |
| GAAAAATCGACAACTCTCTA+TGG | - | chr3_1:90045706-90045725 | None:intergenic | 35.0% | |
| ! | TTGCCGAGTTATTCTTTTCA+TGG | + | chr3_1:90045835-90045854 | Msa0386270:intron | 35.0% |
| CTTAAAACTACTCTTGTTCC+AGG | + | chr3_1:90045911-90045930 | Msa0386270:intron | 35.0% | |
| TGCAGATTAGGGAGAATAAT+TGG | + | chr3_1:90045943-90045962 | Msa0386270:CDS | 35.0% | |
| ! | GATTACCTGGAAGAAGGTAT+TGG | - | chr3_1:90043798-90043817 | None:intergenic | 40.0% |
| TGGATAGAAATGTCGAACGA+GGG | - | chr3_1:90043946-90043965 | None:intergenic | 40.0% | |
| ! | GGTGACACGAAAAGTTTTCT+TGG | - | chr3_1:90044184-90044203 | None:intergenic | 40.0% |
| TGGCTATGAAGCTATTGAAC+AGG | + | chr3_1:90044431-90044450 | Msa0386270:CDS | 40.0% | |
| !! | ATATCGGTGTTGAGAAACAG+CGG | + | chr3_1:90044476-90044495 | Msa0386270:intron | 40.0% |
| ACAAGAATGGTTCTTACACG+AGG | + | chr3_1:90044817-90044836 | Msa0386270:intron | 40.0% | |
| !! | CAGTTTGTTTTTCGCTCAAG+CGG | + | chr3_1:90044911-90044930 | Msa0386270:intron | 40.0% |
| !! | AGTTTGTTTTTCGCTCAAGC+GGG | + | chr3_1:90044912-90044931 | Msa0386270:intron | 40.0% |
| GCTATTGTGAGCGAAAAACA+AGG | - | chr3_1:90044940-90044959 | None:intergenic | 40.0% | |
| TGCGTACTATTAACAAGGAC+GGG | - | chr3_1:90044977-90044996 | None:intergenic | 40.0% | |
| CTGCGTACTATTAACAAGGA+CGG | - | chr3_1:90044978-90044997 | None:intergenic | 40.0% | |
| !! | AGGCTTTGTTGAACAACAAG+AGG | - | chr3_1:90045168-90045187 | None:intergenic | 40.0% |
| !! | TCTTGTTGTTCAACAAAGCC+TGG | + | chr3_1:90045167-90045186 | Msa0386270:intron | 40.0% |
| GCAACATTTAGTAATCTGCC+AGG | - | chr3_1:90045188-90045207 | None:intergenic | 40.0% | |
| AAGCGAGGATTTCCATACAT+TGG | - | chr3_1:90045258-90045277 | None:intergenic | 40.0% | |
| TTGACAGTTACTTGTACCCT+AGG | - | chr3_1:90045374-90045393 | None:intergenic | 40.0% | |
| CAGCAGTTAAATGTAAGGCT+TGG | - | chr3_1:90045646-90045665 | None:intergenic | 40.0% | |
| AACTCGGCAAAATTAGGGAA+AGG | - | chr3_1:90045825-90045844 | None:intergenic | 40.0% | |
| TAATCTGCACATAAGGAACC+TGG | - | chr3_1:90045932-90045951 | None:intergenic | 40.0% | |
| AGGTTCCTTATGTGCAGATT+AGG | + | chr3_1:90045931-90045950 | Msa0386270:intron | 40.0% | |
| GGTTCCTTATGTGCAGATTA+GGG | + | chr3_1:90045932-90045951 | Msa0386270:intron | 40.0% | |
| TTCTCCCTAATCTGCACATA+AGG | - | chr3_1:90045939-90045958 | None:intergenic | 40.0% | |
| ATGCAGACTACAAAGGTAGA+TGG | + | chr3_1:90045973-90045992 | Msa0386270:CDS | 40.0% | |
| CTCTACTTAGATGAGGCTTA+GGG | - | chr3_1:90046096-90046115 | None:intergenic | 40.0% | |
| CTAAGCCTCATCTAAGTAGA+GGG | + | chr3_1:90046095-90046114 | Msa0386270:three_prime_UTR | 40.0% | |
| ACGATATGACATTACATCCC+CGG | + | chr3_1:90046308-90046327 | Msa0386270:three_prime_UTR | 40.0% | |
| ATGGAGACATCTCTGCGATA+TGG | + | chr3_1:90043719-90043738 | Msa0386270:CDS | 45.0% | |
| CAAGTCGTGTTATCCCAACA+AGG | + | chr3_1:90043872-90043891 | Msa0386270:intron | 45.0% | |
| TGTTATCCCAACAAGGTTCG+CGG | + | chr3_1:90043879-90043898 | Msa0386270:intron | 45.0% | |
| GGAGAGCTTGACACGAAAAA+TGG | + | chr3_1:90043900-90043919 | Msa0386270:CDS | 45.0% | |
| CTGGATAGAAATGTCGAACG+AGG | - | chr3_1:90043947-90043966 | None:intergenic | 45.0% | |
| TTGTAGTTATCAGCCACGCT+TGG | + | chr3_1:90044075-90044094 | Msa0386270:intron | 45.0% | |
| ! | ACTTTTCGTGTCACCGAAGA+TGG | + | chr3_1:90044189-90044208 | Msa0386270:CDS | 45.0% |
| TTGTAGAGGAAATCCAGAGG+AGG | + | chr3_1:90044348-90044367 | Msa0386270:intron | 45.0% | |
| TAGTTCAAATCCCGCTATGG+TGG | - | chr3_1:90044504-90044523 | None:intergenic | 45.0% | |
| TTGTTAACTAGCGGCTGTAG+TGG | + | chr3_1:90044569-90044588 | Msa0386270:intron | 45.0% | |
| TGTAGTGGCGGTATATTGAC+AGG | + | chr3_1:90044584-90044603 | Msa0386270:intron | 45.0% | |
| TGGCGGTATATTGACAGGAT+TGG | + | chr3_1:90044589-90044608 | Msa0386270:intron | 45.0% | |
| TGGGTCTTACAAGTACCAAG+AGG | - | chr3_1:90044855-90044874 | None:intergenic | 45.0% | |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr3_1:90045041-90045060 | Msa0386270:intron | 45.0% |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr3_1:90045042-90045061 | Msa0386270:intron | 45.0% |
| AAAGAAAATAGGGGCAAGCG+AGG | - | chr3_1:90045273-90045292 | None:intergenic | 45.0% | |
| TTAGATGAGGCTTAGGGTTG+GGG | - | chr3_1:90046090-90046109 | None:intergenic | 45.0% | |
| CTTAGATGAGGCTTAGGGTT+GGG | - | chr3_1:90046091-90046110 | None:intergenic | 45.0% | |
| ACTTAGATGAGGCTTAGGGT+TGG | - | chr3_1:90046092-90046111 | None:intergenic | 45.0% | |
| CCTCTACTTAGATGAGGCTT+AGG | - | chr3_1:90046097-90046116 | None:intergenic | 45.0% | |
| CCTAAGCCTCATCTAAGTAG+AGG | + | chr3_1:90046094-90046113 | Msa0386270:three_prime_UTR | 45.0% | |
| ATGGTCCCTCTACTTAGATG+AGG | - | chr3_1:90046103-90046122 | None:intergenic | 45.0% | |
| !! | TCTGTTATCGGGCCATTTTG+CGG | - | chr3_1:90046227-90046246 | None:intergenic | 45.0% |
| TCAACCACTTGAATTACGCC+GGG | - | chr3_1:90046329-90046348 | None:intergenic | 45.0% | |
| CTCAACCACTTGAATTACGC+CGG | - | chr3_1:90046330-90046349 | None:intergenic | 45.0% | |
| GAGACATCTCTGCGATATGG+AGG | + | chr3_1:90043722-90043741 | Msa0386270:CDS | 50.0% | |
| CGACACCAATACCTTCTTCC+AGG | + | chr3_1:90043790-90043809 | Msa0386270:CDS | 50.0% | |
| ! | ACGAGGGCACGCAAAGAATT+AGG | - | chr3_1:90043930-90043949 | None:intergenic | 50.0% |
| !! | TTATCAGCCACGCTTGGTGT+AGG | + | chr3_1:90044081-90044100 | Msa0386270:CDS | 50.0% |
| TGAAAACTCAGCTCCTCCTC+TGG | - | chr3_1:90044364-90044383 | None:intergenic | 50.0% | |
| ! | GAGGAGGAGCTGAGTTTTCA+TGG | + | chr3_1:90044364-90044383 | Msa0386270:CDS | 50.0% |
| TTAACTAGCGGCTGTAGTGG+CGG | + | chr3_1:90044572-90044591 | Msa0386270:intron | 50.0% | |
| AACTGACGCGTCTCCAATGA+CGG | - | chr3_1:90044896-90044915 | None:intergenic | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr3_1:90045043-90045062 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr3_1:90045040-90045059 | Msa0386270:intron | 50.0% |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr3_1:90045046-90045065 | Msa0386270:intron | 50.0% | |
| !! | CTCTAGGGTGAACTGTCCTA+GGG | + | chr3_1:90045355-90045374 | Msa0386270:intron | 50.0% |
| TAGATGAGGCTTAGGGTTGG+GGG | - | chr3_1:90046089-90046108 | None:intergenic | 50.0% | |
| CAACCACTTGAATTACGCCG+GGG | - | chr3_1:90046328-90046347 | None:intergenic | 50.0% | |
| AGCTCTCCGCGAACCTTGTT+GGG | - | chr3_1:90043888-90043907 | None:intergenic | 55.0% | |
| AAGCTCTCCGCGAACCTTGT+TGG | - | chr3_1:90043889-90043908 | None:intergenic | 55.0% | |
| TTGCACTCCTACACCAAGCG+TGG | - | chr3_1:90044091-90044110 | None:intergenic | 55.0% | |
| !! | AAACAGCGGTGCCACCATAG+CGG | + | chr3_1:90044490-90044509 | Msa0386270:intron | 55.0% |
| CGACCCCACTTAGTGGGATA+AGG | - | chr3_1:90045048-90045067 | None:intergenic | 55.0% | |
| !! | GCTCTAGGGTGAACTGTCCT+AGG | + | chr3_1:90045354-90045373 | Msa0386270:intron | 55.0% |
| CATCCCCGGCGTAATTCAAG+TGG | + | chr3_1:90046322-90046341 | Msa0386270:three_prime_UTR | 55.0% | |
| !! | AACAGCGGTGCCACCATAGC+GGG | + | chr3_1:90044491-90044510 | Msa0386270:intron | 60.0% |
| TGCAGCCGACCCCACTTAGT+GGG | - | chr3_1:90045054-90045073 | None:intergenic | 60.0% | |
| ATGCAGCCGACCCCACTTAG+TGG | - | chr3_1:90045055-90045074 | None:intergenic | 60.0% | |
| ACTAAGTGGGGTCGGCTGCA+TGG | + | chr3_1:90045054-90045073 | Msa0386270:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 90043664 | 90046361 | 90043664 | ID=Msa0386270;Name=Msa0386270 |
| chr3_1 | mRNA | 90043664 | 90046361 | 90043664 | ID=Msa0386270-mRNA-1;Parent=Msa0386270;Name=Msa0386270-mRNA-1;_AED=0.11;_eAED=0.11;_QI=55|1|1|1|1|1|5|345|178 |
| chr3_1 | exon | 90043664 | 90043811 | 90043664 | ID=Msa0386270-mRNA-1:exon:24714;Parent=Msa0386270-mRNA-1 |
| chr3_1 | exon | 90043894 | 90043968 | 90043894 | ID=Msa0386270-mRNA-1:exon:24715;Parent=Msa0386270-mRNA-1 |
| chr3_1 | exon | 90044081 | 90044266 | 90044081 | ID=Msa0386270-mRNA-1:exon:24716;Parent=Msa0386270-mRNA-1 |
| chr3_1 | exon | 90044354 | 90044452 | 90044354 | ID=Msa0386270-mRNA-1:exon:24717;Parent=Msa0386270-mRNA-1 |
| chr3_1 | exon | 90045933 | 90046361 | 90045933 | ID=Msa0386270-mRNA-1:exon:24718;Parent=Msa0386270-mRNA-1 |
| chr3_1 | five_prime_UTR | 90043664 | 90043718 | 90043664 | ID=Msa0386270-mRNA-1:five_prime_utr;Parent=Msa0386270-mRNA-1 |
| chr3_1 | CDS | 90043719 | 90043811 | 90043719 | ID=Msa0386270-mRNA-1:cds;Parent=Msa0386270-mRNA-1 |
| chr3_1 | CDS | 90043894 | 90043968 | 90043894 | ID=Msa0386270-mRNA-1:cds;Parent=Msa0386270-mRNA-1 |
| chr3_1 | CDS | 90044081 | 90044266 | 90044081 | ID=Msa0386270-mRNA-1:cds;Parent=Msa0386270-mRNA-1 |
| chr3_1 | CDS | 90044354 | 90044452 | 90044354 | ID=Msa0386270-mRNA-1:cds;Parent=Msa0386270-mRNA-1 |
| chr3_1 | CDS | 90045933 | 90046016 | 90045933 | ID=Msa0386270-mRNA-1:cds;Parent=Msa0386270-mRNA-1 |
| chr3_1 | three_prime_UTR | 90046017 | 90046361 | 90046017 | ID=Msa0386270-mRNA-1:three_prime_utr;Parent=Msa0386270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
