AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0415050


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0415050 MtrunA17_Chr3g0108671 95.370 216 10 0 1 216 1 216 3.30e-155 428
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0415050 AT5G58250.1 77.698 139 31 0 75 213 70 208 4.13e-77 231

Find 83 sgRNAs with CRISPR-Local

Find 345 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTATGTTTCTTGAAATTT+TGG 0.059619 3_2:+61105171 None:intergenic
CACCACCCAGATTCATATTT+AGG 0.214169 3_2:+61101304 None:intergenic
TTATTGATTGGCATATAAAA+AGG 0.239359 3_2:-61100850 None:intergenic
CCCTATCCTAAATATGAATC+TGG 0.285716 3_2:-61101310 Msa0415050:CDS
TAAAATAAAGTAAGAATATA+AGG 0.289363 3_2:-61105531 None:intergenic
GACGTCAAAGATGAGATATT+TGG 0.293677 3_2:-61100941 Msa0415050:three_prime_UTR
TGTCATTGAGCCTAAGTTCT+TGG 0.311126 3_2:-61103606 Msa0415050:CDS
TTTGAACGCCGTCGCTACTA+TGG 0.311898 3_2:-61103659 Msa0415050:CDS
CCCCATTCTGTTTCAGTAAC+CGG 0.313035 3_2:-61101225 Msa0415050:three_prime_UTR
GAAGCAACAGCAGTGATAAA+AGG 0.313085 3_2:+61105149 None:intergenic
AAGAGAGAGTGGGACAATTC+GGG 0.320498 3_2:+61105469 None:intergenic
GTTAGAAAGGATGTGCCTTT+TGG 0.329162 3_2:+61105235 None:intergenic
GGCGTTCAAATAGTTGTTCT+TGG 0.330758 3_2:+61103672 None:intergenic
TCACTCTTTACCAATGAGTT+TGG 0.337284 3_2:-61105207 Msa0415050:CDS
AGAAATAGATCTACAAATTC+CGG 0.337387 3_2:+61101206 None:intergenic
GAAGAGAGAGTGGGACAATT+CGG 0.339603 3_2:+61105468 None:intergenic
GTCCTTAGGCTCTAAGTTCT+AGG 0.343635 3_2:-61101076 Msa0415050:three_prime_UTR
GTAATAAAGAACAGGATTAC+TGG 0.361902 3_2:-61103631 Msa0415050:CDS
CGCAGTTTCTTGATAAAGTC+AGG 0.393349 3_2:+61103575 None:intergenic
ATCTATATTTCACTCATTTG+AGG 0.401260 3_2:+61101040 None:intergenic
TGGGAAACTTTCTTGCCCTC+TGG 0.417486 3_2:-61101283 Msa0415050:CDS
TTCTCAAATTCCAGCTTAGT+AGG 0.423773 3_2:+61101352 None:intergenic
AAATTCCAGCTTAGTAGGAT+TGG 0.428131 3_2:+61101357 None:intergenic
AAAGTTGAAGTGTTGTCCTT+AGG 0.436163 3_2:-61101090 Msa0415050:three_prime_UTR
TCCGGTTACTGAAACAGAAT+GGG 0.442631 3_2:+61101224 None:intergenic
AATTTGAGAAGCCTGCAAAA+TGG 0.444037 3_2:-61101339 Msa0415050:CDS
TGCAAATGCAAAATTTATGC+TGG 0.444095 3_2:-61103711 Msa0415050:CDS
AAGAGTGAGTTCTGTTAGAA+AGG 0.452390 3_2:+61105222 None:intergenic
GGCAATTGGCGAAGAGAGAG+TGG 0.452515 3_2:+61105458 None:intergenic
CCAGATTCATATTTAGGATA+GGG 0.459432 3_2:+61101310 None:intergenic
TAGTGTCAACCAACGGTCCT+TGG 0.460321 3_2:-61103535 Msa0415050:CDS
CTTGCCCTCTGGACAGAAAG+AGG 0.461986 3_2:-61101272 Msa0415050:CDS
TGCAACAATAAAATAATACT+TGG 0.464259 3_2:+61103730 None:intergenic
TAGATTTAGATAACTAGATA+AGG 0.465602 3_2:-61105508 Msa0415050:five_prime_UTR
GAAGATGTGTAGAGAGAGTG+AGG 0.472653 3_2:+61105390 None:intergenic
CAGATTCATGAAATTAAGAC+TGG 0.474576 3_2:-61101434 Msa0415050:CDS
TATAAAGCTTGTGTAAAGGC+TGG 0.488262 3_2:-61100914 Msa0415050:three_prime_UTR
TGGAGAACGTAATAAAGAAC+AGG 0.488529 3_2:-61103639 Msa0415050:CDS
TGCAAAATTTATGCTGGATG+AGG 0.488625 3_2:-61103705 Msa0415050:CDS
TTCCGGTTACTGAAACAGAA+TGG 0.495540 3_2:+61101223 None:intergenic
ATTTGAGAAGCCTGCAAAAT+GGG 0.501452 3_2:-61101338 Msa0415050:CDS
AGTTGGTGAACTCAAAGTTA+AGG 0.501880 3_2:+61105289 None:intergenic
TTCCAGCTTAGTAGGATTGG+AGG 0.503729 3_2:+61101360 None:intergenic
CCCAGATTCATATTTAGGAT+AGG 0.506511 3_2:+61101309 None:intergenic
CTAAATATGAATCTGGGTGG+TGG 0.508070 3_2:-61101303 Msa0415050:CDS
AGCCTCCAATCCTACTAAGC+TGG 0.514208 3_2:-61101362 Msa0415050:CDS
GCTAGCACGATGCTTGGCAT+GGG 0.515622 3_2:-61105314 Msa0415050:exon
TAAATATGAATCTGGGTGGT+GGG 0.516208 3_2:-61101302 Msa0415050:CDS
GAGTGGAGAAAGATGGCAAT+TGG 0.516641 3_2:+61105444 None:intergenic
GTTTGAGCTACCATTGTAGT+TGG 0.518753 3_2:+61105272 None:intergenic
TACCTAGAACTTAGAGCCTA+AGG 0.520854 3_2:+61101074 None:intergenic
AGCTAGCACGATGCTTGGCA+TGG 0.522656 3_2:-61105315 Msa0415050:exon
GTGGGAGAGACCAAACTCAT+TGG 0.524830 3_2:+61105197 None:intergenic
GGAAAACTATCCAAGAACTT+AGG 0.529282 3_2:+61103596 None:intergenic
TTCTGATGCACCTGCCACCA+AGG 0.538067 3_2:-61105102 Msa0415050:intron
ACAAGAGCTAGCACGATGCT+TGG 0.540081 3_2:-61105320 Msa0415050:exon
CCACTCTTACCTCTTCCAAA+AGG 0.546522 3_2:-61105250 Msa0415050:CDS
ATTATATAAAGCTTGTGTAA+AGG 0.547757 3_2:-61100918 Msa0415050:three_prime_UTR
CCTATCCTAAATATGAATCT+GGG 0.552298 3_2:-61101309 Msa0415050:CDS
TTCACCTCTTTCTGTCCAGA+GGG 0.555465 3_2:+61101268 None:intergenic
TTATGTTCTTACGTGATCCA+AGG 0.559994 3_2:+61103518 None:intergenic
AAAATTTATGCTGGATGAGG+AGG 0.565968 3_2:-61103702 Msa0415050:CDS
CAGCAAAGAGTGGAGAAAGA+TGG 0.569234 3_2:+61105437 None:intergenic
TTACGTGATCCAAGGACCGT+TGG 0.571710 3_2:+61103526 None:intergenic
AGAGAGAGTGGGACAATTCG+GGG 0.579166 3_2:+61105470 None:intergenic
GTTCACCTCTTTCTGTCCAG+AGG 0.581865 3_2:+61101267 None:intergenic
GAGAGAGTGGGACAATTCGG+GGG 0.587562 3_2:+61105471 None:intergenic
CACAATATCTAACACGCAGT+CGG 0.588526 3_2:+61100979 None:intergenic
TACGTTCTCCATAGTAGCGA+CGG 0.602345 3_2:+61103651 None:intergenic
TTTGAGTTCACCAACTACAA+TGG 0.618572 3_2:-61105282 Msa0415050:CDS
GTTATGACAACAGCAAAGAG+TGG 0.634462 3_2:+61105427 None:intergenic
GCAATTGGCGAAGAGAGAGT+GGG 0.644618 3_2:+61105459 None:intergenic
CTAGCACGATGCTTGGCATG+GGG 0.653262 3_2:-61105313 Msa0415050:exon
TGAGAAGCCTGCAAAATGGG+TGG 0.654553 3_2:-61101335 Msa0415050:CDS
CTGACTTTATCAAGAAACTG+CGG 0.655587 3_2:-61103574 Msa0415050:CDS
GTTGACACTAGAGCAACAGC+AGG 0.658553 3_2:+61103548 None:intergenic
TGTGATAAGATAACGCACAA+AGG 0.658969 3_2:+61105349 None:intergenic
CCGGTTACTGAAACAGAATG+GGG 0.659040 3_2:+61101225 None:intergenic
GTTGCTCTAGTGTCAACCAA+CGG 0.671470 3_2:-61103542 Msa0415050:CDS
GGTTACTGAAACAGAATGGG+GGG 0.677815 3_2:+61101227 None:intergenic
CGGTTACTGAAACAGAATGG+GGG 0.679526 3_2:+61101226 None:intergenic
AGAGAGTGGGACAATTCGGG+GGG 0.699858 3_2:+61105472 None:intergenic
ATCCTAAATATGAATCTGGG+TGG 0.714399 3_2:-61101306 Msa0415050:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAAATTTTTTAAAAATAT+TGG - chr3_2:61103398-61103417 Msa0415050:intron 0.0%
!! TAATGTCTTTAAATTAAAAA+AGG + chr3_2:61101845-61101864 None:intergenic 10.0%
!!! TATTTTATTTTATTTTTGTG+GGG - chr3_2:61102951-61102970 Msa0415050:intron 10.0%
!!! ATATTAAATTACTTTTTTGA+GGG + chr3_2:61103056-61103075 None:intergenic 10.0%
!!! TTTATGTTTCTTGAAATTTT+GGG + chr3_2:61101208-61101227 None:intergenic 15.0%
!!! TATTAAATTACTTTTTTGAG+GGG + chr3_2:61103055-61103074 None:intergenic 15.0%
!!! GATATTAAATTACTTTTTTG+AGG + chr3_2:61103057-61103076 None:intergenic 15.0%
!! ATATAAACATAGAATACAAA+CGG + chr3_2:61103193-61103212 None:intergenic 15.0%
!!! TTTATATTTGAAATGAGATT+TGG - chr3_2:61103206-61103225 Msa0415050:intron 15.0%
!!! CATTTTTTAAATACTATTAG+TGG + chr3_2:61103336-61103355 None:intergenic 15.0%
!! TAAAATCTGAGTAATTAAAT+CGG - chr3_2:61104511-61104530 Msa0415050:intron 15.0%
!! AAAAGAAATTGTAAGAAATA+AGG - chr3_2:61104816-61104835 Msa0415050:intron 15.0%
!! AAAGAAATTGTAAGAAATAA+GGG - chr3_2:61104817-61104836 Msa0415050:intron 15.0%
!! TTTACATTAATAAAAATCGT+TGG + chr3_2:61105197-61105216 None:intergenic 15.0%
!!! GATTTTTATTAATGTAAAAC+TGG - chr3_2:61105199-61105218 Msa0415050:CDS 15.0%
!! TAGATTTAGATAACTAGATA+AGG - chr3_2:61100869-61100888 Msa0415050:three_prime_UTR 20.0%
!!! GTTTATGTTTCTTGAAATTT+TGG + chr3_2:61101209-61101228 None:intergenic 20.0%
!!! AATATTTGTTTTCTACTAAG+TGG - chr3_2:61101355-61101374 Msa0415050:CDS 20.0%
!! TAAATGTTTGAATGTTTGAA+AGG - chr3_2:61101421-61101440 Msa0415050:CDS 20.0%
!! AAATGTTTGAATGTTTGAAA+GGG - chr3_2:61101422-61101441 Msa0415050:CDS 20.0%
!!! AATTTTATGGACTAATTACA+AGG + chr3_2:61101483-61101502 None:intergenic 20.0%
!!! ATCAAGGATTTTCAATTTTA+TGG + chr3_2:61101496-61101515 None:intergenic 20.0%
!! TGCAACAATAAAATAATACT+TGG + chr3_2:61102650-61102669 None:intergenic 20.0%
!!! ATTAAATTACTTTTTTGAGG+GGG + chr3_2:61103054-61103073 None:intergenic 20.0%
!! TATTTGCCATATATTACATT+TGG - chr3_2:61103293-61103312 Msa0415050:intron 20.0%
!! ATTTGCCATATATTACATTT+GGG - chr3_2:61103294-61103313 Msa0415050:intron 20.0%
!!! AAAACCACTTTAAAAAAAAC+TGG - chr3_2:61103575-61103594 Msa0415050:CDS 20.0%
!!! TAAACCAGTTTTTTTTAAAG+TGG + chr3_2:61103582-61103601 None:intergenic 20.0%
!! AAAAAACAATGACTAAAATC+CGG + chr3_2:61103753-61103772 None:intergenic 20.0%
!! AAAAGTTCTTAAATTCAAAC+CGG - chr3_2:61104187-61104206 Msa0415050:intron 20.0%
!! TCATATTATACCATTTGAAA+CGG + chr3_2:61104797-61104816 None:intergenic 20.0%
!! ATTATATAAAGCTTGTGTAA+AGG - chr3_2:61105459-61105478 Msa0415050:five_prime_UTR 20.0%
!!! AGTTTACACTTTTTATTGAT+TGG - chr3_2:61105515-61105534 Msa0415050:five_prime_UTR 20.0%
! ACAAGACATAGTTATAATGT+GGG + chr3_2:61101331-61101350 None:intergenic 25.0%
! TGTGGCAAAAAAATATCTAA+CGG - chr3_2:61101596-61101615 Msa0415050:intron 25.0%
!! AATTTAAAATCTCAACCGTT+AGG - chr3_2:61101730-61101749 Msa0415050:intron 25.0%
! AGTTCCATTTACATCATTTA+GGG + chr3_2:61102032-61102051 None:intergenic 25.0%
! AAGTTCCATTTACATCATTT+AGG + chr3_2:61102033-61102052 None:intergenic 25.0%
! TCATTCTCTCTTATCTTTAA+AGG + chr3_2:61102226-61102245 None:intergenic 25.0%
! TTAAAGATAAGAGAGAATGA+TGG - chr3_2:61102226-61102245 Msa0415050:intron 25.0%
! AGTTCATTTACGTATCAAAT+TGG - chr3_2:61102448-61102467 Msa0415050:intron 25.0%
!! CACTTTTAATATCTGATATG+TGG + chr3_2:61103095-61103114 None:intergenic 25.0%
! CACATATCAGATATTAAAAG+TGG - chr3_2:61103093-61103112 Msa0415050:intron 25.0%
! TTAAAAGTGGACAATTCATT+TGG - chr3_2:61103106-61103125 Msa0415050:intron 25.0%
! TGGCAAATAACAAAATGATT+TGG + chr3_2:61103282-61103301 None:intergenic 25.0%
!!! ATTTAATTTTCTCTTGTTGC+TGG + chr3_2:61103385-61103404 None:intergenic 25.0%
! CTGAATTGTATCCATTAATA+TGG + chr3_2:61103550-61103569 None:intergenic 25.0%
! AAACTAGTTCAAGAATTATC+TGG + chr3_2:61103725-61103744 None:intergenic 25.0%
! TGATATATTGCATAAATGTG+AGG + chr3_2:61104090-61104109 None:intergenic 25.0%
!! GTTCAGATTTTCTAATTGTA+GGG + chr3_2:61104421-61104440 None:intergenic 25.0%
!! ATTACTCAGATTTTAAGCTT+GGG + chr3_2:61104506-61104525 None:intergenic 25.0%
!! AATTACTCAGATTTTAAGCT+TGG + chr3_2:61104507-61104526 None:intergenic 25.0%
! TAAAAACAAAATGAAGACTC+TGG + chr3_2:61104578-61104597 None:intergenic 25.0%
! GCTGTCAACATATAATAAAA+TGG - chr3_2:61104868-61104887 Msa0415050:intron 25.0%
! AGAAATAGATCTACAAATTC+CGG + chr3_2:61105174-61105193 None:intergenic 25.0%
!!! GCTTTCAGTTTTGTAATTTT+TGG - chr3_2:61105246-61105265 Msa0415050:CDS 25.0%
!!! TCAGTTTTGTAATTTTTGGA+AGG - chr3_2:61105250-61105269 Msa0415050:CDS 25.0%
! ATCTATATTTCACTCATTTG+AGG + chr3_2:61105340-61105359 None:intergenic 25.0%
!!! TTCTTGAAATTTTGGGTTGT+GGG + chr3_2:61101201-61101220 None:intergenic 30.0%
!!! TTTCTTGAAATTTTGGGTTG+TGG + chr3_2:61101202-61101221 None:intergenic 30.0%
GATAAGAGAAAAAGAAACCT+TGG + chr3_2:61101295-61101314 None:intergenic 30.0%
CACAAGACATAGTTATAATG+TGG + chr3_2:61101332-61101351 None:intergenic 30.0%
!!! TGCAATTTTGAGGTCAATTT+TGG + chr3_2:61101459-61101478 None:intergenic 30.0%
! ATTACAAGGATGCAATTTTG+AGG + chr3_2:61101469-61101488 None:intergenic 30.0%
GACTCAAAATAATGTGATCA+AGG + chr3_2:61101512-61101531 None:intergenic 30.0%
TAAATGGAACTTAGCCTAAA+TGG - chr3_2:61102041-61102060 Msa0415050:intron 30.0%
! AGAACTACTAGTTTCATTTC+AGG - chr3_2:61102471-61102490 Msa0415050:intron 30.0%
TTTCATTTCAGGAACTGAAT+TGG - chr3_2:61102482-61102501 Msa0415050:intron 30.0%
! TCTTGATGGTTTATAAGCAT+TGG - chr3_2:61102543-61102562 Msa0415050:intron 30.0%
!!! ACTTATTGAGTTGGTTTTTG+TGG - chr3_2:61102577-61102596 Msa0415050:intron 30.0%
TGCAAATGCAAAATTTATGC+TGG - chr3_2:61102666-61102685 Msa0415050:intron 30.0%
GTAATAAAGAACAGGATTAC+TGG - chr3_2:61102746-61102765 Msa0415050:intron 30.0%
!! ATACTTCATTTTTCAGTGCT+TGG - chr3_2:61102886-61102905 Msa0415050:intron 30.0%
CTGTCATAAACTATGAAAAG+TGG - chr3_2:61102914-61102933 Msa0415050:intron 30.0%
AGGAACCCAAATGTAATATA+TGG + chr3_2:61103302-61103321 None:intergenic 30.0%
!! TACTATTAGTGGACTCTAAA+AGG + chr3_2:61103325-61103344 None:intergenic 30.0%
TAAGCCTAATAGCTCAAATT+AGG - chr3_2:61103490-61103509 Msa0415050:intron 30.0%
AAGCCTAATAGCTCAAATTA+GGG - chr3_2:61103491-61103510 Msa0415050:intron 30.0%
TTGGAACTGAACCATATTAA+TGG - chr3_2:61103536-61103555 Msa0415050:CDS 30.0%
! CTGGTTCGAAATAAATAAAC+CGG + chr3_2:61103665-61103684 None:intergenic 30.0%
! GAATTATCTGGTTCAAAAAC+CGG + chr3_2:61103713-61103732 None:intergenic 30.0%
!!! TCTTGAACTAGTTTTCAAAC+CGG - chr3_2:61103731-61103750 Msa0415050:CDS 30.0%
ATTGAATTGTTAGATCTCAG+TGG + chr3_2:61103826-61103845 None:intergenic 30.0%
ATTCCATGAGAAATCAAAGA+CGG + chr3_2:61103903-61103922 None:intergenic 30.0%
! TAAGCTCAAGCATTGTTAAA+GGG - chr3_2:61103982-61104001 Msa0415050:intron 30.0%
!! AGTGGTGTTAATTTTGTTCT+CGG - chr3_2:61104122-61104141 Msa0415050:intron 30.0%
CAGTTCAAAACTGTTTGAAA+TGG - chr3_2:61104258-61104277 Msa0415050:intron 30.0%
AAAGACATGTATTTGAGCTA+GGG + chr3_2:61104354-61104373 None:intergenic 30.0%
AAAAGACATGTATTTGAGCT+AGG + chr3_2:61104355-61104374 None:intergenic 30.0%
! GGTTCAGATTTTCTAATTGT+AGG + chr3_2:61104422-61104441 None:intergenic 30.0%
!!! ATTTTGTTTTTACCCCTTAG+AGG - chr3_2:61104586-61104605 Msa0415050:intron 30.0%
! TATTATACCATTTGAAACGG+TGG + chr3_2:61104794-61104813 None:intergenic 30.0%
CAGATTCATGAAATTAAGAC+TGG - chr3_2:61104943-61104962 Msa0415050:intron 30.0%
! CCAGATTCATATTTAGGATA+GGG + chr3_2:61105070-61105089 None:intergenic 30.0%
CCTATCCTAAATATGAATCT+GGG - chr3_2:61105068-61105087 Msa0415050:intron 30.0%
TGTGATAAGATAACGCACAA+AGG + chr3_2:61101031-61101050 None:intergenic 35.0%
!! AGTTGGTGAACTCAAAGTTA+AGG + chr3_2:61101091-61101110 None:intergenic 35.0%
! TTTGAGTTCACCAACTACAA+TGG - chr3_2:61101095-61101114 Msa0415050:three_prime_UTR 35.0%
AAGAGTGAGTTCTGTTAGAA+AGG + chr3_2:61101158-61101177 None:intergenic 35.0%
TCACTCTTTACCAATGAGTT+TGG - chr3_2:61101170-61101189 Msa0415050:three_prime_UTR 35.0%
AAGAGAAAAAGAAACCTTGG+TGG + chr3_2:61101292-61101311 None:intergenic 35.0%
TAAATGGAGCTTAGCCTAAA+TGG + chr3_2:61101558-61101577 None:intergenic 35.0%
AAGCTCCATTTACTCCATTT+AGG - chr3_2:61101566-61101585 Msa0415050:intron 35.0%
AGCTCCATTTACTCCATTTA+GGG - chr3_2:61101567-61101586 Msa0415050:intron 35.0%
CAAACCCTAAATGGAGTAAA+TGG + chr3_2:61101574-61101593 None:intergenic 35.0%
! CATTTACTCCATTTAGGGTT+TGG - chr3_2:61101572-61101591 Msa0415050:intron 35.0%
TGTTGTGATATGAGAGAAGA+AGG - chr3_2:61101651-61101670 Msa0415050:intron 35.0%
GTTGTGATATGAGAGAAGAA+GGG - chr3_2:61101652-61101671 Msa0415050:intron 35.0%
!!! CTCAACCGTTAGGTATTTTT+TGG - chr3_2:61101740-61101759 Msa0415050:intron 35.0%
TGTGGCCAAAAAATACCTAA+CGG + chr3_2:61101748-61101767 None:intergenic 35.0%
!!! TTAGGTATTTTTTGGCCACA+TGG - chr3_2:61101748-61101767 Msa0415050:intron 35.0%
! ACATCATTTAGGGTGTGTTT+GGG + chr3_2:61102022-61102041 None:intergenic 35.0%
! TACATCATTTAGGGTGTGTT+TGG + chr3_2:61102023-61102042 None:intergenic 35.0%
CACACCCTAAATGATGTAAA+TGG - chr3_2:61102025-61102044 Msa0415050:intron 35.0%
TTAGGTACTAAACTGGAGTT+CGG + chr3_2:61102074-61102093 None:intergenic 35.0%
TCATAAAGCCTTCACAATCT+AGG + chr3_2:61102176-61102195 None:intergenic 35.0%
! TGAAGGCTTTATGAACTAGA+AGG - chr3_2:61102182-61102201 Msa0415050:intron 35.0%
!! TATGAACTAGAAGGTGTCAT+TGG - chr3_2:61102191-61102210 Msa0415050:intron 35.0%
!!! TAGAAGGTGTCATTGGTTTT+TGG - chr3_2:61102198-61102217 Msa0415050:intron 35.0%
TGTAGATGAGAGAGAATGAT+TGG - chr3_2:61102270-61102289 Msa0415050:intron 35.0%
! TGATTGGTTAAACGAGAGAT+AGG - chr3_2:61102286-61102305 Msa0415050:intron 35.0%
!! TTTTGTTTAAACCCTCCAGT+AGG + chr3_2:61102350-61102369 None:intergenic 35.0%
GTCAATGTCAGATCACTTTA+GGG + chr3_2:61102383-61102402 None:intergenic 35.0%
AGTCAATGTCAGATCACTTT+AGG + chr3_2:61102384-61102403 None:intergenic 35.0%
CAATTAGCTGTTGTTCTTGA+TGG - chr3_2:61102529-61102548 Msa0415050:intron 35.0%
TCACGTAGTACTTATTGAGT+TGG - chr3_2:61102568-61102587 Msa0415050:intron 35.0%
TGCAAAATTTATGCTGGATG+AGG - chr3_2:61102672-61102691 Msa0415050:intron 35.0%
AAAATTTATGCTGGATGAGG+AGG - chr3_2:61102675-61102694 Msa0415050:intron 35.0%
TGGAGAACGTAATAAAGAAC+AGG - chr3_2:61102738-61102757 Msa0415050:intron 35.0%
GGAAAACTATCCAAGAACTT+AGG + chr3_2:61102784-61102803 None:intergenic 35.0%
CTGACTTTATCAAGAAACTG+CGG - chr3_2:61102803-61102822 Msa0415050:intron 35.0%
TTATGTTCTTACGTGATCCA+AGG + chr3_2:61102862-61102881 None:intergenic 35.0%
!! CACTTCAATAGCTTGCTATT+GGG + chr3_2:61103025-61103044 None:intergenic 35.0%
TTAATATCGTGTGACCCATT+AGG - chr3_2:61103069-61103088 Msa0415050:intron 35.0%
TATCTGATATGTGGCCTAAT+GGG + chr3_2:61103086-61103105 None:intergenic 35.0%
ATATCTGATATGTGGCCTAA+TGG + chr3_2:61103087-61103106 None:intergenic 35.0%
AATCAGCATATCTCAATCGT+TGG - chr3_2:61103155-61103174 Msa0415050:intron 35.0%
!! GTCATTGGCTTAAGATCAAA+CGG + chr3_2:61103248-61103267 None:intergenic 35.0%
TTTGATCTTAAGCCAATGAC+CGG - chr3_2:61103248-61103267 Msa0415050:intron 35.0%
!! TATTAGTGGACTCTAAAAGG+AGG + chr3_2:61103322-61103341 None:intergenic 35.0%
AGCCTAATAGCTCAAATTAG+GGG - chr3_2:61103492-61103511 Msa0415050:intron 35.0%
!! TTCATGGTTCTAAACTGCAT+TGG - chr3_2:61103517-61103536 Msa0415050:intron 35.0%
! TTTTCAAACCAGTTCCAGTT+CGG - chr3_2:61103603-61103622 Msa0415050:CDS 35.0%
!!! ACTGGTTTACAGTTTTGAAC+CGG - chr3_2:61103643-61103662 Msa0415050:CDS 35.0%
!!! ACCGGTTTACAGTTTTAAAC+CGG - chr3_2:61103691-61103710 Msa0415050:CDS 35.0%
! ACCGGTTTAAAACTGTAAAC+CGG + chr3_2:61103695-61103714 None:intergenic 35.0%
TTCCATGAGAAATCAAAGAC+GGG + chr3_2:61103902-61103921 None:intergenic 35.0%
! GTAAGCTCAAGCATTGTTAA+AGG - chr3_2:61103981-61104000 Msa0415050:intron 35.0%
GCTGAATAAAATTCCAACGA+TGG - chr3_2:61104045-61104064 Msa0415050:intron 35.0%
! GGAATTTTATTCACCATCGT+TGG + chr3_2:61104061-61104080 None:intergenic 35.0%
ATATCAGATTGAAAGACCAG+TGG - chr3_2:61104104-61104123 Msa0415050:intron 35.0%
GAGAACAAAATTAACACCAC+TGG + chr3_2:61104123-61104142 None:intergenic 35.0%
!! GTGGTGTTAATTTTGTTCTC+GGG - chr3_2:61104123-61104142 Msa0415050:intron 35.0%
AAATGGTTCAGTCCAAAACA+GGG - chr3_2:61104275-61104294 Msa0415050:intron 35.0%
! ATGCAGTTTGGTTCATAGTT+TGG - chr3_2:61104302-61104321 Msa0415050:intron 35.0%
AAGACATGTATTTGAGCTAG+GGG + chr3_2:61104353-61104372 None:intergenic 35.0%
!!! AAATTTTAACTCTTCCCCTG+TGG - chr3_2:61104911-61104930 Msa0415050:intron 35.0%
!!! AATTTTAACTCTTCCCCTGT+GGG - chr3_2:61104912-61104931 Msa0415050:intron 35.0%
AAATTCCAGCTTAGTAGGAT+TGG + chr3_2:61105023-61105042 None:intergenic 35.0%
TTCTCAAATTCCAGCTTAGT+AGG + chr3_2:61105028-61105047 None:intergenic 35.0%
AATTTGAGAAGCCTGCAAAA+TGG - chr3_2:61105038-61105057 Msa0415050:intron 35.0%
ATTTGAGAAGCCTGCAAAAT+GGG - chr3_2:61105039-61105058 Msa0415050:intron 35.0%
CCCTATCCTAAATATGAATC+TGG - chr3_2:61105067-61105086 Msa0415050:intron 35.0%
! CCCAGATTCATATTTAGGAT+AGG + chr3_2:61105071-61105090 None:intergenic 35.0%
ATCCTAAATATGAATCTGGG+TGG - chr3_2:61105071-61105090 Msa0415050:intron 35.0%
TAAATATGAATCTGGGTGGT+GGG - chr3_2:61105075-61105094 Msa0415050:intron 35.0%
!! AAAGTTGAAGTGTTGTCCTT+AGG - chr3_2:61105287-61105306 Msa0415050:CDS 35.0%
GACGTCAAAGATGAGATATT+TGG - chr3_2:61105436-61105455 Msa0415050:five_prime_UTR 35.0%
TATAAAGCTTGTGTAAAGGC+TGG - chr3_2:61105463-61105482 Msa0415050:five_prime_UTR 35.0%
GTTATGACAACAGCAAAGAG+TGG + chr3_2:61100953-61100972 None:intergenic 40.0%
GTTTGAGCTACCATTGTAGT+TGG + chr3_2:61101108-61101127 None:intergenic 40.0%
! GTTAGAAAGGATGTGCCTTT+TGG + chr3_2:61101145-61101164 None:intergenic 40.0%
GAAGCAACAGCAGTGATAAA+AGG + chr3_2:61101231-61101250 None:intergenic 40.0%
TTGAGTCAGTTTAGCGAGTT+CGG - chr3_2:61101525-61101544 Msa0415050:intron 40.0%
TAGGTACTAAACTGGAGTTC+GGG + chr3_2:61102073-61102092 None:intergenic 40.0%
CTCCAGTTTAGTACCTAAAG+TGG - chr3_2:61102076-61102095 Msa0415050:intron 40.0%
GACCACTTTAGGTACTAAAC+TGG + chr3_2:61102081-61102100 None:intergenic 40.0%
GTTCTCTTGAAGACCACTTT+AGG + chr3_2:61102092-61102111 None:intergenic 40.0%
! GACGAAAGATTGTTCTAGCT+AGG + chr3_2:61102127-61102146 None:intergenic 40.0%
! TCACAATCTAGGATTCGACA+GGG + chr3_2:61102165-61102184 None:intergenic 40.0%
! TTCACAATCTAGGATTCGAC+AGG + chr3_2:61102166-61102185 None:intergenic 40.0%
TGTCGAATCCTAGATTGTGA+AGG - chr3_2:61102165-61102184 Msa0415050:intron 40.0%
GATAGGAACCAATGTACCTA+AGG - chr3_2:61102303-61102322 Msa0415050:intron 40.0%
GGCGTTCAAATAGTTGTTCT+TGG + chr3_2:61102708-61102727 None:intergenic 40.0%
TGTCATTGAGCCTAAGTTCT+TGG - chr3_2:61102771-61102790 Msa0415050:intron 40.0%
CGCAGTTTCTTGATAAAGTC+AGG + chr3_2:61102805-61102824 None:intergenic 40.0%
GTTGCACTATTGTATGAGCT+TGG + chr3_2:61102981-61103000 None:intergenic 40.0%
!! CCACTTCAATAGCTTGCTAT+TGG + chr3_2:61103026-61103045 None:intergenic 40.0%
CCAATAGCAAGCTATTGAAG+TGG - chr3_2:61103023-61103042 Msa0415050:intron 40.0%
!!! ATTACTTTTTTGAGGGGGAG+AGG + chr3_2:61103049-61103068 None:intergenic 40.0%
! AAATGATTTGGATCGCATGC+CGG + chr3_2:61103270-61103289 None:intergenic 40.0%
GTGGTTAACTATAGTGACTG+GGG + chr3_2:61103464-61103483 None:intergenic 40.0%
GGTGGTTAACTATAGTGACT+GGG + chr3_2:61103465-61103484 None:intergenic 40.0%
AGGTGGTTAACTATAGTGAC+TGG + chr3_2:61103466-61103485 None:intergenic 40.0%
TGAGCTATTAGGCTTAGCTT+AGG + chr3_2:61103486-61103505 None:intergenic 40.0%
CACCCCTAATTTGAGCTATT+AGG + chr3_2:61103497-61103516 None:intergenic 40.0%
!! GTTTTAAACCGAACTGGAAC+TGG + chr3_2:61103614-61103633 None:intergenic 40.0%
! GTTCCAGTTCGGTTTAAAAC+CGG - chr3_2:61103614-61103633 Msa0415050:CDS 40.0%
!! GTTTAAAACCGGTTCTGAAC+TGG - chr3_2:61103625-61103644 Msa0415050:CDS 40.0%
ACTGTAAACCAGTTCAGAAC+CGG + chr3_2:61103636-61103655 None:intergenic 40.0%
ATTTCGAACCAGTTTCGAAC+CGG - chr3_2:61103673-61103692 Msa0415050:CDS 40.0%
! TTCCCGTCTTTGATTTCTCA+TGG - chr3_2:61103897-61103916 Msa0415050:intron 40.0%
GAGCTTACATCGTTGGAATT+GGG + chr3_2:61103969-61103988 None:intergenic 40.0%
TGAGCTTACATCGTTGGAAT+TGG + chr3_2:61103970-61103989 None:intergenic 40.0%
AATGCTTGAGCTTACATCGT+TGG + chr3_2:61103976-61103995 None:intergenic 40.0%
TGCATAAATGTGAGGCAAGT+TGG + chr3_2:61104082-61104101 None:intergenic 40.0%
!! AATTCAAACCGGTTCTGAAC+CGG - chr3_2:61104198-61104217 Msa0415050:intron 40.0%
GTTTAAATCCGGTTCAGAAC+CGG + chr3_2:61104209-61104228 None:intergenic 40.0%
GTTCCAGTGCAGTTTAAATC+CGG + chr3_2:61104220-61104239 None:intergenic 40.0%
GATTTAAACTGCACTGGAAC+TGG - chr3_2:61104220-61104239 Msa0415050:intron 40.0%
!! CTGGAACTGGTTTGAAAAAG+TGG - chr3_2:61104233-61104252 Msa0415050:intron 40.0%
GAAATGGTTCAGTCCAAAAC+AGG - chr3_2:61104274-61104293 Msa0415050:intron 40.0%
TATATGCTTGCATCACGAGT+TGG - chr3_2:61104376-61104395 Msa0415050:intron 40.0%
!! ATCACGAGTTGGTCATTTGT+GGG - chr3_2:61104387-61104406 Msa0415050:intron 40.0%
CTGAACCATCTGATTGTGAT+CGG - chr3_2:61104435-61104454 Msa0415050:intron 40.0%
ATCCGTGAGTCATGCAAATT+GGG + chr3_2:61104538-61104557 None:intergenic 40.0%
AATCCGTGAGTCATGCAAAT+TGG + chr3_2:61104539-61104558 None:intergenic 40.0%
TTAGCAACTGACACCTCTAA+GGG + chr3_2:61104602-61104621 None:intergenic 40.0%
TTTAGCAACTGACACCTCTA+AGG + chr3_2:61104603-61104622 None:intergenic 40.0%
TAGAGATCCACCGTTTCAAA+TGG - chr3_2:61104784-61104803 Msa0415050:intron 40.0%
!! AGACTGGATCGAGTTTTATC+AGG - chr3_2:61104959-61104978 Msa0415050:intron 40.0%
CACCACCCAGATTCATATTT+AGG + chr3_2:61105076-61105095 None:intergenic 40.0%
CTAAATATGAATCTGGGTGG+TGG - chr3_2:61105074-61105093 Msa0415050:intron 40.0%
TCCGGTTACTGAAACAGAAT+GGG + chr3_2:61105156-61105175 None:intergenic 40.0%
TTCCGGTTACTGAAACAGAA+TGG + chr3_2:61105157-61105176 None:intergenic 40.0%
TACCTAGAACTTAGAGCCTA+AGG + chr3_2:61105306-61105325 None:intergenic 40.0%
CACAATATCTAACACGCAGT+CGG + chr3_2:61105401-61105420 None:intergenic 40.0%
AAGAGAGAGTGGGACAATTC+GGG + chr3_2:61100911-61100930 None:intergenic 45.0%
GAAGAGAGAGTGGGACAATT+CGG + chr3_2:61100912-61100931 None:intergenic 45.0%
GAGTGGAGAAAGATGGCAAT+TGG + chr3_2:61100936-61100955 None:intergenic 45.0%
CAGCAAAGAGTGGAGAAAGA+TGG + chr3_2:61100943-61100962 None:intergenic 45.0%
GAAGATGTGTAGAGAGAGTG+AGG + chr3_2:61100990-61101009 None:intergenic 45.0%
!! CCTTTTGGAAGAGGTAAGAG+TGG + chr3_2:61101130-61101149 None:intergenic 45.0%
CCACTCTTACCTCTTCCAAA+AGG - chr3_2:61101127-61101146 Msa0415050:three_prime_UTR 45.0%
!! AAGGATGTGCCTTTTGGAAG+AGG + chr3_2:61101139-61101158 None:intergenic 45.0%
! GAAAAAGAAACCTTGGTGGC+AGG + chr3_2:61101288-61101307 None:intergenic 45.0%
TGAGTCAGTTTAGCGAGTTC+GGG - chr3_2:61101526-61101545 Msa0415050:intron 45.0%
AGTTCGGGTATGCTCCATTT+AGG - chr3_2:61101541-61101560 Msa0415050:intron 45.0%
! CTCCATTTAGGGTTTGGATG+TGG - chr3_2:61101578-61101597 Msa0415050:intron 45.0%
TGCCACATCCAAACCCTAAA+TGG + chr3_2:61101583-61101602 None:intergenic 45.0%
! CAAACCCTAAGGGTGTGTTT+GGG - chr3_2:61101779-61101798 Msa0415050:intron 45.0%
TCTTCCCAAACACACCCTTA+GGG + chr3_2:61101786-61101805 None:intergenic 45.0%
! TAAGGGTGTGTTTGGGAAGA+GGG - chr3_2:61101786-61101805 Msa0415050:intron 45.0%
TGTGTTTGGGAAGAGGGTTT+AGG - chr3_2:61101792-61101811 Msa0415050:intron 45.0%
TTTGGGAAGAGGGTTTAGGA+GGG - chr3_2:61101796-61101815 Msa0415050:intron 45.0%
! TCATTTAGGGTGTGTTTGGG+AGG + chr3_2:61102019-61102038 None:intergenic 45.0%
AGTTCGGGTATGCTCCATTT+AGG + chr3_2:61101541-61101560 None:intergenic 45.0%
ACCAATGTACCTAAGGCCAA+TGG - chr3_2:61102310-61102329 Msa0415050:intron 45.0%
GGATTTCACTTGGATGCCAT+TGG + chr3_2:61102329-61102348 None:intergenic 45.0%
GCATCCAAGTGAAATCCTAC+TGG - chr3_2:61102332-61102351 Msa0415050:intron 45.0%
TCCAAGTGAAATCCTACTGG+AGG - chr3_2:61102335-61102354 Msa0415050:intron 45.0%
CCAAGTGAAATCCTACTGGA+GGG - chr3_2:61102336-61102355 Msa0415050:intron 45.0%
TACGTTCTCCATAGTAGCGA+CGG + chr3_2:61102729-61102748 None:intergenic 45.0%
GTTGCTCTAGTGTCAACCAA+CGG - chr3_2:61102835-61102854 Msa0415050:intron 45.0%
GCTATTAGGCTTAGCTTAGG+TGG + chr3_2:61103483-61103502 None:intergenic 45.0%
!! GCTCAAATTAGGGGTGTTCA+TGG - chr3_2:61103501-61103520 Msa0415050:intron 45.0%
!!! GAACCGGTTTTAAACCGAAC+TGG + chr3_2:61103620-61103639 None:intergenic 45.0%
!! ACTGTAAACCGGTTCGAAAC+TGG + chr3_2:61103684-61103703 None:intergenic 45.0%
TCTCATGGAATCAACGTTGC+TGG - chr3_2:61103912-61103931 Msa0415050:intron 45.0%
AATTGGGAAGCTGGAACGAT+GGG + chr3_2:61103953-61103972 None:intergenic 45.0%
GAACCGGATTTAAACTGCAC+TGG - chr3_2:61104214-61104233 Msa0415050:intron 45.0%
! AACTGCATCCAACCCTGTTT+TGG + chr3_2:61104290-61104309 None:intergenic 45.0%
AAACAGGGTTGGATGCAGTT+TGG - chr3_2:61104290-61104309 Msa0415050:intron 45.0%
!! CATCACGAGTTGGTCATTTG+TGG - chr3_2:61104386-61104405 Msa0415050:intron 45.0%
! GAGTTGGTCATTTGTGGGAT+TGG - chr3_2:61104392-61104411 Msa0415050:intron 45.0%
ACCATCTGATTGTGATCGGA+CGG - chr3_2:61104439-61104458 Msa0415050:intron 45.0%
GTCCCAATTTGCATGACTCA+CGG - chr3_2:61104533-61104552 Msa0415050:intron 45.0%
TAGCAACTGACACCTCTAAG+GGG + chr3_2:61104601-61104620 None:intergenic 45.0%
AACGGTGGATCTCTATCTGA+TGG + chr3_2:61104779-61104798 None:intergenic 45.0%
AATCTGCCAAAACACCCACA+GGG + chr3_2:61104929-61104948 None:intergenic 45.0%
TTCCAGCTTAGTAGGATTGG+AGG + chr3_2:61105020-61105039 None:intergenic 45.0%
TTCACCTCTTTCTGTCCAGA+GGG + chr3_2:61105112-61105131 None:intergenic 45.0%
GGTTACTGAAACAGAATGGG+GGG + chr3_2:61105153-61105172 None:intergenic 45.0%
CGGTTACTGAAACAGAATGG+GGG + chr3_2:61105154-61105173 None:intergenic 45.0%
CCGGTTACTGAAACAGAATG+GGG + chr3_2:61105155-61105174 None:intergenic 45.0%
CCCCATTCTGTTTCAGTAAC+CGG - chr3_2:61105152-61105171 Msa0415050:CDS 45.0%
!! GTCCTTAGGCTCTAAGTTCT+AGG - chr3_2:61105301-61105320 Msa0415050:CDS 45.0%
!!! TTTATTTTATTTTATTTTTG+TGG - chr3_2:61102949-61102968 Msa0415050:intron 5.0%
!!! TTATTTTATTTTATTTTTGT+GGG - chr3_2:61102950-61102969 Msa0415050:intron 5.0%
GACAATTCGGGGGGATATCA+TGG + chr3_2:61100899-61100918 None:intergenic 50.0%
AGAGAGAGTGGGACAATTCG+GGG + chr3_2:61100910-61100929 None:intergenic 50.0%
GCAATTGGCGAAGAGAGAGT+GGG + chr3_2:61100921-61100940 None:intergenic 50.0%
ACAAGAGCTAGCACGATGCT+TGG - chr3_2:61101057-61101076 Msa0415050:three_prime_UTR 50.0%
GTGGGAGAGACCAAACTCAT+TGG + chr3_2:61101183-61101202 None:intergenic 50.0%
! TGGCTTGCATCCAAACCCTA+AGG - chr3_2:61101768-61101787 Msa0415050:intron 50.0%
GGCTTGCATCCAAACCCTAA+GGG - chr3_2:61101769-61101788 Msa0415050:intron 50.0%
CCAAACACACCCTTAGGGTT+TGG + chr3_2:61101781-61101800 None:intergenic 50.0%
! CCAAACCCTAAGGGTGTGTT+TGG - chr3_2:61101778-61101797 Msa0415050:intron 50.0%
CTCTTCCCAAACACACCCTT+AGG + chr3_2:61101787-61101806 None:intergenic 50.0%
! CTAAGGGTGTGTTTGGGAAG+AGG - chr3_2:61101785-61101804 Msa0415050:intron 50.0%
GTTTGGGAAGAGGGTTTAGG+AGG - chr3_2:61101795-61101814 Msa0415050:intron 50.0%
TTGGGAAGAGGGTTTAGGAG+GGG - chr3_2:61101797-61101816 Msa0415050:intron 50.0%
AAGAGGGTTTAGGAGGGGAA+GGG - chr3_2:61101802-61101821 Msa0415050:intron 50.0%
TTTGGGAGGAGGGTTTAGGA+GGG + chr3_2:61102005-61102024 None:intergenic 50.0%
TGTGTTTGGGAGGAGGGTTT+AGG + chr3_2:61102009-61102028 None:intergenic 50.0%
TTAGGGTGTGTTTGGGAGGA+GGG + chr3_2:61102015-61102034 None:intergenic 50.0%
! TTTAGGGTGTGTTTGGGAGG+AGG + chr3_2:61102016-61102035 None:intergenic 50.0%
!! GCCATTGGCCTTAGGTACAT+TGG + chr3_2:61102314-61102333 None:intergenic 50.0%
!! ACTTGGATGCCATTGGCCTT+AGG + chr3_2:61102322-61102341 None:intergenic 50.0%
CCCTCCAGTAGGATTTCACT+TGG + chr3_2:61102339-61102358 None:intergenic 50.0%
TTTGAACGCCGTCGCTACTA+TGG - chr3_2:61102718-61102737 Msa0415050:intron 50.0%
GTTGACACTAGAGCAACAGC+AGG + chr3_2:61102832-61102851 None:intergenic 50.0%
TAGTGTCAACCAACGGTCCT+TGG - chr3_2:61102842-61102861 Msa0415050:intron 50.0%
TTACGTGATCCAAGGACCGT+TGG + chr3_2:61102854-61102873 None:intergenic 50.0%
ATTGGGAAGCTGGAACGATG+GGG + chr3_2:61103952-61103971 None:intergenic 50.0%
GAATTGGGAAGCTGGAACGA+TGG + chr3_2:61103954-61103973 None:intergenic 50.0%
CATCGTTGGAATTGGGAAGC+TGG + chr3_2:61103962-61103981 None:intergenic 50.0%
GGTTCAGTCCAAAACAGGGT+TGG - chr3_2:61104279-61104298 Msa0415050:intron 50.0%
ATCTGCCAAAACACCCACAG+GGG + chr3_2:61104928-61104947 None:intergenic 50.0%
GAATCTGCCAAAACACCCAC+AGG + chr3_2:61104930-61104949 None:intergenic 50.0%
AGCCTCCAATCCTACTAAGC+TGG - chr3_2:61105015-61105034 Msa0415050:intron 50.0%
TGAGAAGCCTGCAAAATGGG+TGG - chr3_2:61105042-61105061 Msa0415050:intron 50.0%
TGGGAAACTTTCTTGCCCTC+TGG - chr3_2:61105094-61105113 Msa0415050:intron 50.0%
GTTCACCTCTTTCTGTCCAG+AGG + chr3_2:61105113-61105132 None:intergenic 50.0%
AGAGAGTGGGACAATTCGGG+GGG + chr3_2:61100908-61100927 None:intergenic 55.0%
GAGAGAGTGGGACAATTCGG+GGG + chr3_2:61100909-61100928 None:intergenic 55.0%
GGCAATTGGCGAAGAGAGAG+TGG + chr3_2:61100922-61100941 None:intergenic 55.0%
AGCTAGCACGATGCTTGGCA+TGG - chr3_2:61101062-61101081 Msa0415050:three_prime_UTR 55.0%
GCTAGCACGATGCTTGGCAT+GGG - chr3_2:61101063-61101082 Msa0415050:three_prime_UTR 55.0%
CTAGCACGATGCTTGGCATG+GGG - chr3_2:61101064-61101083 Msa0415050:three_prime_UTR 55.0%
TTCTGATGCACCTGCCACCA+AGG - chr3_2:61101275-61101294 Msa0415050:CDS 55.0%
GGGTTTGGATGCAAGCCATG+TGG + chr3_2:61101766-61101785 None:intergenic 55.0%
GAAGAGGGTTTAGGAGGGGA+AGG - chr3_2:61101801-61101820 Msa0415050:intron 55.0%
AGGAGGGTTTAGGAGGGGAA+GGG + chr3_2:61101999-61102018 None:intergenic 55.0%
TTGGGAGGAGGGTTTAGGAG+GGG + chr3_2:61102004-61102023 None:intergenic 55.0%
GTTTGGGAGGAGGGTTTAGG+AGG + chr3_2:61102006-61102025 None:intergenic 55.0%
TTGGATCGCATGCCGGTCAT+TGG + chr3_2:61103263-61103282 None:intergenic 55.0%
TTGGGAAGCTGGAACGATGG+GGG + chr3_2:61103951-61103970 None:intergenic 55.0%
GCCGTCCGATCACAATCAGA+TGG + chr3_2:61104443-61104462 None:intergenic 55.0%
ACTCACGGATTCCTGACTGC+AGG - chr3_2:61104548-61104567 Msa0415050:intron 55.0%
ACTCTGGATTGCCTGCAGTC+AGG + chr3_2:61104562-61104581 None:intergenic 55.0%
! CTCTTCCCCTGTGGGTGTTT+TGG - chr3_2:61104920-61104939 Msa0415050:intron 55.0%
!! TAGGGTGCCACCCATTTTGC+AGG + chr3_2:61105052-61105071 None:intergenic 55.0%
CTTGCCCTCTGGACAGAAAG+AGG - chr3_2:61105105-61105124 Msa0415050:CDS 55.0%
AGGGTTTAGGAGGGGAAGGG+AGG - chr3_2:61101805-61101824 Msa0415050:intron 60.0%
GGGTTTAGGAGGGGAAGGGA+GGG - chr3_2:61101806-61101825 Msa0415050:intron 60.0%
GGTTTAGGAGGGGAAGGGAG+GGG - chr3_2:61101807-61101826 Msa0415050:intron 60.0%
GGTTTAGGAGGGGAAGGGAG+GGG + chr3_2:61101807-61101826 None:intergenic 60.0%
GGGTTTAGGAGGGGAAGGGA+GGG + chr3_2:61101806-61101825 None:intergenic 60.0%
AGGGTTTAGGAGGGGAAGGG+AGG + chr3_2:61101805-61101824 None:intergenic 60.0%
GAGGAGGGTTTAGGAGGGGA+AGG + chr3_2:61102000-61102019 None:intergenic 60.0%
CGGGAACGATTCGAGAGCAG+TGG + chr3_2:61103883-61103902 None:intergenic 60.0%
TTAGGAGGGGAAGGGAGGGG+AGG - chr3_2:61101810-61101829 Msa0415050:intron 65.0%
TAGGAGGGGAAGGGAGGGGA+GGG + chr3_2:61101811-61101830 None:intergenic 65.0%
TTAGGAGGGGAAGGGAGGGG+AGG + chr3_2:61101810-61101829 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 61100851 61105548 61100851 ID=Msa0415050;Name=Msa0415050
chr3_2 mRNA 61100851 61105548 61100851 ID=Msa0415050-mRNA-1;Parent=Msa0415050;Name=Msa0415050-mRNA-1;_AED=0.02;_eAED=0.02;_QI=221|1|1|1|1|1|3|410|216
chr3_2 exon 61100851 61101453 61100851 ID=Msa0415050-mRNA-1:exon:12885;Parent=Msa0415050-mRNA-1
chr3_2 exon 61103530 61103762 61103530 ID=Msa0415050-mRNA-1:exon:12884;Parent=Msa0415050-mRNA-1
chr3_2 exon 61105103 61105548 61105103 ID=Msa0415050-mRNA-1:exon:12883;Parent=Msa0415050-mRNA-1
chr3_2 five_prime_UTR 61105328 61105548 61105328 ID=Msa0415050-mRNA-1:five_prime_utr;Parent=Msa0415050-mRNA-1
chr3_2 CDS 61105103 61105327 61105103 ID=Msa0415050-mRNA-1:cds;Parent=Msa0415050-mRNA-1
chr3_2 CDS 61103530 61103762 61103530 ID=Msa0415050-mRNA-1:cds;Parent=Msa0415050-mRNA-1
chr3_2 CDS 61101261 61101453 61101261 ID=Msa0415050-mRNA-1:cds;Parent=Msa0415050-mRNA-1
chr3_2 three_prime_UTR 61100851 61101260 61100851 ID=Msa0415050-mRNA-1:three_prime_utr;Parent=Msa0415050-mRNA-1
Gene Sequence

>Msa0415050

ATGCTTGGCATGGGGTCCTTAACTTTGAGTTCACCAACTACAATGGTAGCTCAAACCACTCTTACCTCTTCCAAAAGGCACATCCTTTCTAACAGAACTCACTCTTTACCAATGAGTTTGGTCTCTCCCACAACCCAAAATTTCAAGAAACATAAACCTTTTATCACTGCTGTTGCTTCTGTTCAATCTGACAACGTTAGTTCTTCTGATGCACCTGCCACCAAGAGTGAGTTCACCAAGTATTATTTTATTGTTGCAAATGCAAAATTTATGCTGGATGAGGAGGAGCATTTCCAAGAACAACTATTTGAACGCCGTCGCTACTATGGAGAACGTAATAAAGAACAGGATTACTGGCTTGTCATTGAGCCTAAGTTCTTGGATAGTTTTCCTGACTTTATCAAGAAACTGCGGAGACCTGCTGTTGCTCTAGTGTCAACCAACGGTCCTTGGATCACATTCATGAAATTAAGACTGGATCGAGTTTTATCAGGAAGTTTTGAAGCTGACAGCTTAGAAGAAGCATTAGCCTCCAATCCTACTAAGCTGGAATTTGAGAAGCCTGCAAAATGGGTGGCACCCTATCCTAAATATGAATCTGGGTGGTGGGAAACTTTCTTGCCCTCTGGACAGAAAGAGGTGAACACTTGA

Protein sequence

>Msa0415050

MLGMGSLTLSSPTTMVAQTTLTSSKRHILSNRTHSLPMSLVSPTTQNFKKHKPFITAVASVQSDNVSSSDAPATKSEFTKYYFIVANAKFMLDEEEHFQEQLFERRRYYGERNKEQDYWLVIEPKFLDSFPDFIKKLRRPAVALVSTNGPWITFMKLRLDRVLSGSFEADSLEEALASNPTKLEFEKPAKWVAPYPKYESGWWETFLPSGQKEVNT*