AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0796610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0796610 MtrunA17_Chr5g0399671 93.484 399 25 1 1 398 1 399 0.0 751
Msa0796610 MtrunA17_Chr5g0399671 78.520 419 38 5 397 790 22 413 0.0 635
Msa0796610 MtrunA17_Chr5g0399661 85.649 439 14 2 397 813 20 431 0.0 751
Msa0796610 MtrunA17_Chr5g0399661 87.437 398 44 4 1 398 3 394 0.0 698
Msa0796610 MtrunA17_Chr1g0211181 43.407 364 196 5 43 398 9 370 1.04e-89 288
Msa0796610 MtrunA17_Chr1g0211181 37.002 427 210 6 415 812 8 404 1.47e-80 264
Msa0796610 MtrunA17_Chr1g0211141 41.417 367 206 4 43 401 2 367 8.17e-80 262
Msa0796610 MtrunA17_Chr1g0211141 35.831 427 214 6 416 812 2 398 1.48e-68 232
Msa0796610 MtrunA17_Chr1g0211171 40.970 371 203 5 46 401 9 378 1.17e-76 254
Msa0796610 MtrunA17_Chr1g0211171 35.035 431 213 6 419 812 9 409 1.56e-66 227
Msa0796610 MtrunA17_Chr1g0197161 40.483 373 209 5 41 401 4 375 5.39e-76 252
Msa0796610 MtrunA17_Chr1g0197161 35.797 433 214 7 414 812 4 406 5.70e-67 228
Msa0796610 MtrunA17_Chr1g0211151 38.338 373 217 5 41 401 4 375 4.07e-66 226
Msa0796610 MtrunA17_Chr1g0211151 32.949 434 227 8 413 812 3 406 1.81e-54 194
Msa0796610 MtrunA17_Chr4g0017991 45.045 111 59 1 415 523 5 115 1.75e-23 98.6
Msa0796610 MtrunA17_Chr4g0017991 40.000 130 58 1 43 172 6 115 3.56e-22 95.1
Msa0796610 MtrunA17_Chr4g0018001 28.643 199 132 3 206 394 3 201 6.99e-23 98.6
Msa0796610 MtrunA17_Chr4g0018001 27.273 209 142 3 584 782 3 211 6.87e-22 95.9
Msa0796610 MtrunA17_Chr8g0375081 26.316 380 245 14 36 392 73 440 3.00e-22 102
Msa0796610 MtrunA17_Chr8g0375081 24.330 448 243 18 365 761 29 431 2.47e-18 89.7
Msa0796610 MtrunA17_Chr5g0402211 25.789 380 245 13 37 392 69 435 8.84e-22 100
Msa0796610 MtrunA17_Chr5g0402211 24.263 441 243 20 372 761 26 426 2.48e-17 86.7
Msa0796610 MtrunA17_Chr4g0010391 31.455 213 134 7 567 775 211 415 1.39e-20 95.9
Msa0796610 MtrunA17_Chr4g0010391 28.980 245 161 8 143 383 166 401 4.26e-19 91.3
Msa0796610 MtrunA17_Chr4g0017951 53.521 71 33 0 43 113 6 76 1.09e-19 84.0
Msa0796610 MtrunA17_Chr4g0017951 52.632 76 35 1 411 486 2 76 4.41e-19 82.4
Msa0796610 MtrunA17_Chr4g0017981 32.203 118 74 1 283 394 4 121 6.62e-12 64.7
Msa0796610 MtrunA17_Chr4g0017981 30.579 121 78 1 661 775 4 124 6.30e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0796610 AT2G35660.1 65.155 419 97 2 415 811 43 434 0.0 559
Msa0796610 AT2G35660.1 66.753 388 128 1 11 398 13 399 0.0 538
Msa0796610 AT2G29720.1 64.796 392 135 2 8 398 8 397 2.00e-175 511
Msa0796610 AT2G29720.1 58.333 384 111 2 429 790 55 411 1.09e-155 461
Msa0796610 AT2G35660.2 66.667 327 82 1 485 811 21 320 5.79e-157 460
Msa0796610 AT2G35660.2 69.474 285 87 0 114 398 1 285 6.07e-144 427
Msa0796610 AT2G35660.3 66.667 327 82 1 485 811 21 320 5.79e-157 460
Msa0796610 AT2G35660.3 69.474 285 87 0 114 398 1 285 6.07e-144 427
Msa0796610 AT5G05320.1 36.314 369 216 7 44 398 7 370 1.34e-73 246
Msa0796610 AT5G05320.1 31.795 390 202 5 417 772 7 366 4.16e-64 221
Msa0796610 AT4G38540.1 35.695 367 219 5 46 398 9 372 9.91e-68 230
Msa0796610 AT4G38540.1 30.841 428 230 6 419 811 9 405 5.35e-60 209
Msa0796610 AT4G15760.1 32.615 371 222 9 54 409 39 396 1.15e-48 178
Msa0796610 AT4G15760.1 29.504 383 205 10 427 776 39 389 2.43e-40 154
Msa0796610 AT4G15760.2 32.190 379 225 9 54 409 39 408 1.85e-48 178
Msa0796610 AT4G15760.2 28.861 395 204 11 427 776 39 401 7.61e-39 150
Msa0796610 AT4G15765.1 27.451 306 162 7 46 339 6 263 2.39e-24 103
Msa0796610 AT4G15765.1 26.645 304 172 6 419 717 6 263 1.20e-22 99.0
Msa0796610 AT5G67030.2 26.301 346 221 12 35 360 72 403 3.32e-22 102
Msa0796610 AT5G67030.2 25.205 365 192 14 415 738 79 403 4.85e-18 89.4
Msa0796610 AT5G67030.1 26.301 346 221 12 35 360 72 403 3.34e-22 102
Msa0796610 AT5G67030.1 25.205 365 192 14 415 738 79 403 3.75e-18 89.7
Msa0796610 AT4G15765.2 26.994 163 108 3 183 339 33 190 5.45e-12 66.2
Msa0796610 AT4G15765.5 26.994 163 108 3 183 339 33 190 5.45e-12 66.2
Msa0796610 AT4G15765.3 26.994 163 108 3 183 339 33 190 5.45e-12 66.2
Msa0796610 AT4G15765.4 26.994 163 108 3 183 339 33 190 5.45e-12 66.2
Msa0796610 AT5G11330.1 23.274 391 252 10 42 398 4 380 7.76e-11 65.5

Find 256 sgRNAs with CRISPR-Local

Find 565 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAGCCTTGATTGTTAATT+TGG 0.116957 5_3:-8649449 None:intergenic
ATGTCTCAACAGATTGTAAT+AGG 0.209668 5_3:+8651280 Msa0796610:intron
GGATACCTTATTGGAATTCT+TGG 0.212200 5_3:+8655407 Msa0796610:CDS
GGATACCTTCTTGGAATTCT+TGG 0.225203 5_3:+8650959 Msa0796610:CDS
CAGGCTTGGTGTTCGGTCTT+TGG 0.226551 5_3:+8649830 Msa0796610:intron
AGATTGAGCCTTGATTAATT+TGG 0.234422 5_3:-8654359 None:intergenic
CGATTACAACATGTTCCTTT+TGG 0.248040 5_3:-8654387 None:intergenic
AGAAATACCATGACCATTAT+AGG 0.249032 5_3:+8656693 Msa0796610:three_prime_UTR
TCCAAATGGGGATACCTTAT+TGG 0.254372 5_3:+8655398 Msa0796610:CDS
CTAAACATTGAGATTGTAAT+AGG 0.257137 5_3:+8655722 Msa0796610:CDS
ACCCACAAGGTTTGCCAGTA+TGG 0.279042 5_3:-8651966 None:intergenic
AGGTTTGCCAGTATGGTTAT+TGG 0.287423 5_3:-8651959 None:intergenic
TACACTTTGGTTGGAGAAAC+AGG 0.298074 5_3:-8651466 None:intergenic
CAAGCTCCTTGCCCAAGATT+TGG 0.304518 5_3:-8651815 None:intergenic
TGCCCAAGATTTGGAGTCAT+TGG 0.307226 5_3:-8656245 None:intergenic
CATGCTCCTTGCCCAAGATT+TGG 0.307845 5_3:-8656254 None:intergenic
TTCATTATGTTTAGTAGCTC+TGG 0.317013 5_3:-8656107 None:intergenic
TGAATATTGTGTATATATTC+AGG 0.322784 5_3:-8656658 None:intergenic
TGCCCAAGATTTGGAGTCAT+TGG 0.325151 5_3:-8651806 None:intergenic
TAGACTTTGGTTGGAGAAAC+AGG 0.332821 5_3:-8655908 None:intergenic
TTGCCTTGTCGTACCAGAAT+TGG 0.332839 5_3:+8649412 Msa0796610:CDS
CACCCAATGACTCCAAATCT+TGG 0.340691 5_3:+8656242 Msa0796610:CDS
TCCAAATGGGGATACCTTCT+TGG 0.343769 5_3:+8650950 Msa0796610:CDS
AGTGGAGAGGAGGGTACTTT+TGG 0.353165 5_3:+8650857 Msa0796610:CDS
AGTGGAGAGGAGGGTACTTT+TGG 0.353165 5_3:+8655305 Msa0796610:CDS
TGGTGTTCGGTCTTTGGTGC+TGG 0.353894 5_3:+8649836 Msa0796610:CDS
TCCAATAAGGTATCCCCATT+TGG 0.359215 5_3:-8655399 None:intergenic
CCACAGGTGAATTACATCTA+TGG 0.363265 5_3:+8651418 Msa0796610:CDS
ATCGTGGGTGGTGGCATTGC+AGG 0.363319 5_3:+8654406 Msa0796610:CDS
TCTCCACTGCACGCACCTCT+TGG 0.364886 5_3:-8650842 None:intergenic
TCTCCACTGCACGCACCTCT+TGG 0.364886 5_3:-8655290 None:intergenic
ATATCGTAGGGATCCAATTC+TGG 0.369127 5_3:-8649425 None:intergenic
GTGAATTACATCTATGGAAA+AGG 0.372345 5_3:+8651424 Msa0796610:CDS
CTAGCACTTATAAAGTTATA+TGG 0.373084 5_3:+8656765 Msa0796610:three_prime_UTR
CATCCAATGACTCCAAATCT+TGG 0.376057 5_3:+8651803 Msa0796610:CDS
GCCCAAGATTTGGAGTCATT+GGG 0.380043 5_3:-8656244 None:intergenic
TTGTTGTGATTTCAAGAGTT+GGG 0.381370 5_3:+8656584 Msa0796610:three_prime_UTR
CTAAGGATCTAGTAGAAAAC+TGG 0.383052 5_3:+8651642 Msa0796610:CDS
CCCATCCAAGAATTCCAATA+AGG 0.383303 5_3:-8655412 None:intergenic
CTAAGGATCTAGTGGAAAAC+TGG 0.384760 5_3:+8656081 Msa0796610:CDS
GTGAATTACATCTACGGAAA+AGG 0.386225 5_3:+8655866 Msa0796610:CDS
CGATTACAACATGTTCCTTT+CGG 0.387738 5_3:-8649483 None:intergenic
TATAGTCTTGACTCCATTGA+TGG 0.389182 5_3:+8651709 Msa0796610:CDS
TAGGACTAAAGCTTCAGAAT+TGG 0.393302 5_3:-8655672 None:intergenic
ATTAAGTTTATATCCTATAA+TGG 0.396976 5_3:-8656706 None:intergenic
TCCAAGAAGGTATCCCCATT+TGG 0.398453 5_3:-8650951 None:intergenic
TCTTTATTTAACCTAATGAT+TGG 0.399120 5_3:+8656797 Msa0796610:three_prime_UTR
AGTAAGGCTTGGTCCATTGC+TGG 0.401844 5_3:+8656493 Msa0796610:CDS
TGGTGTTCGGTCTCTTGTGC+TGG 0.403207 5_3:+8654540 Msa0796610:CDS
TAGCTGTATGTATCCAAATA+TGG 0.404062 5_3:-8656745 None:intergenic
TATAATCAGGACTCCGTTGA+TGG 0.407537 5_3:+8656148 Msa0796610:CDS
GAATTCTCAGGCTTGGTGTT+CGG 0.408757 5_3:+8654527 Msa0796610:intron
GAAGAATATTGAATGCTATC+AGG 0.408814 5_3:-8655351 None:intergenic
ATAGCATTCAATATTCTTCA+CGG 0.412492 5_3:+8655355 Msa0796610:CDS
TGCTTTGAATTTCAAAGAAA+AGG 0.412896 5_3:+8650113 Msa0796610:CDS
TGGAGGGCACTTGATTCAAT+TGG 0.413951 5_3:+8649915 Msa0796610:CDS
CACTCCACCCATTCTTGAAA+AGG 0.414267 5_3:-8654603 None:intergenic
CATAGCACAAGCCAATCATT+AGG 0.414589 5_3:-8656808 None:intergenic
ATGTTTGCCCGTATGGTTAG+TGG 0.417439 5_3:-8656398 None:intergenic
ACCTTCTTGGAATTCTTGGA+TGG 0.417941 5_3:+8650963 Msa0796610:CDS
CGTTGATGGATCGATGGCTT+TGG 0.417946 5_3:+8656162 Msa0796610:CDS
AAAAGGTTGTCCATCTGAAT+AGG 0.421657 5_3:-8655834 None:intergenic
AAAAGGTTGTCCATCTGAAT+AGG 0.421700 5_3:-8651392 None:intergenic
TTTCTCCAACCAAAGTGTAT+TGG 0.421909 5_3:+8651470 Msa0796610:CDS
TCCATTATGTTTAGTAGCTC+CGG 0.421971 5_3:-8651668 None:intergenic
GAATTTCCAGGCTTGGTGTT+CGG 0.422569 5_3:+8649823 Msa0796610:intron
ACGGGCAAACATTGTGGGTT+CGG 0.430334 5_3:+8656409 Msa0796610:CDS
TCCGGAGCTACTAAACATAA+TGG 0.432269 5_3:+8651667 Msa0796610:CDS
ACCCACAATGTTTGCCCGTA+TGG 0.441085 5_3:-8656405 None:intergenic
CATTGATGGATCGATGGCTT+TGG 0.441676 5_3:+8651723 Msa0796610:CDS
TGTGGGTTCGGCTTTGCAAT+GGG 0.445153 5_3:+8656421 Msa0796610:CDS
TTGTCATACCTAAGCTAGTA+AGG 0.446445 5_3:+8656477 Msa0796610:CDS
ATTTGGAGTCATTGGGTGCC+AGG 0.447196 5_3:-8656237 None:intergenic
AAGATTGAACCAAGTCCAAA+TGG 0.447760 5_3:+8650936 Msa0796610:CDS
AAGATTGAACCAAGTCCAAA+TGG 0.447760 5_3:+8655384 Msa0796610:CDS
ACCATACTGGCAAACCTTGT+GGG 0.451653 5_3:+8651965 Msa0796610:CDS
ACTCAATATTTAGAAATTCA+AGG 0.453429 5_3:+8649957 Msa0796610:CDS
ACTCAATATTTAGAAATTCA+AGG 0.453429 5_3:+8654661 Msa0796610:CDS
AGGAGCTTGTTGTGCTCTTG+AGG 0.453532 5_3:+8651829 Msa0796610:CDS
CATATTTCCAATAACCATAC+TGG 0.459252 5_3:+8651952 Msa0796610:CDS
CTTCTTTAGCACCGATGGCT+CGG 0.460032 5_3:-8651615 None:intergenic
ATCGTGGGTGGTGGCATAGC+AGG 0.462878 5_3:+8649502 Msa0796610:CDS
AAGGTATCCCCATTTGGACT+TGG 0.464282 5_3:-8655393 None:intergenic
ACAACTCTACCTGCAGAAAC+AGG 0.465698 5_3:-8656200 None:intergenic
TTGTTAATTTGGAATATCGT+AGG 0.467403 5_3:-8649438 None:intergenic
ACCGATGGCTCGGTTGTTTG+AGG 0.467547 5_3:-8651605 None:intergenic
ATCTTCAATAGTTCATCTGC+AGG 0.468683 5_3:+8651499 Msa0796610:CDS
TAATTCACCCGTGCTTCAAA+AGG 0.468928 5_3:-8655851 None:intergenic
ACCTTATTGGAATTCTTGGA+TGG 0.470171 5_3:+8655411 Msa0796610:CDS
TTTCTCCAACCAAAGTCTAC+TGG 0.470585 5_3:+8655912 Msa0796610:CDS
CAACTGCTCTATCCCTTCAC+AGG 0.470796 5_3:+8649530 Msa0796610:CDS
CAACTGCTCTATCCCTTCAC+AGG 0.470796 5_3:+8654434 Msa0796610:CDS
GCACAATAACCAACGTACTT+TGG 0.472989 5_3:-8651352 None:intergenic
ATCCAATGACTCCAAATCTT+GGG 0.473366 5_3:+8651804 Msa0796610:CDS
ACAACTCTACCTCTAGAAAC+AGG 0.473445 5_3:-8651761 None:intergenic
AAGGTATCCCCATTTGGACT+TGG 0.476269 5_3:-8650945 None:intergenic
ATACCATTCAATATTCTTCA+CGG 0.476649 5_3:+8650907 Msa0796610:CDS
TGCTTCAACAGTTCATCTCC+AGG 0.477142 5_3:+8655941 Msa0796610:CDS
GGCTCAATCTTCAGTCCAAA+AGG 0.477210 5_3:+8654372 Msa0796610:CDS
GGACCAAGCCTTACTAGCTT+AGG 0.477240 5_3:-8656485 None:intergenic
ACAAACCAATACACTTTGGT+TGG 0.478803 5_3:-8651475 None:intergenic
CACCGGATGACACTATAATC+AGG 0.478910 5_3:+8656135 Msa0796610:CDS
TGAATTACATCTACGGAAAA+GGG 0.482581 5_3:+8655867 Msa0796610:CDS
ACCCAATGACTCCAAATCTT+GGG 0.482693 5_3:+8656243 Msa0796610:CDS
TGGAGTGTACTTGATTCAAT+TGG 0.482722 5_3:+8654619 Msa0796610:CDS
ACCATACGGGCAAACATTGT+GGG 0.483763 5_3:+8656404 Msa0796610:CDS
AGGTGCGTGCAGTGGAGAGG+AGG 0.485424 5_3:+8650847 Msa0796610:CDS
AGGTGCGTGCAGTGGAGAGG+AGG 0.485424 5_3:+8655295 Msa0796610:CDS
GCTTGCTTCTTTAGCACCGA+TGG 0.486635 5_3:-8651620 None:intergenic
GCTTGCTTCTTTAGCACCGA+TGG 0.486635 5_3:-8656059 None:intergenic
CTTCTTTAGCACCGATGGCT+CGG 0.487707 5_3:-8656054 None:intergenic
ACCCGCTGGTGTGTTCTGTT+AGG 0.488168 5_3:+8656447 Msa0796610:CDS
AATCATTAGGTTAAATAAAG+AGG 0.488615 5_3:-8656795 None:intergenic
AGATTGAACCAAGTCCAAAT+GGG 0.490772 5_3:+8650937 Msa0796610:CDS
AGATTGAACCAAGTCCAAAT+GGG 0.490772 5_3:+8655385 Msa0796610:CDS
GCACAATGACCAACAAACTT+TGG 0.492071 5_3:-8655794 None:intergenic
CAGAAGTTCCAAATTAATCA+AGG 0.492791 5_3:+8654351 Msa0796610:CDS
ATTGTTGTGATTTCAAGAGT+TGG 0.493147 5_3:+8656583 Msa0796610:three_prime_UTR
GAAGAATATTGAATGGTATC+CGG 0.493585 5_3:-8650903 None:intergenic
TAAACATTGAGATTGTAATA+GGG 0.494308 5_3:+8655723 Msa0796610:CDS
TGTCTCAACAGATTGTAATA+GGG 0.495956 5_3:+8651281 Msa0796610:intron
GAGAATATGGCAATGAAAGA+TGG 0.497368 5_3:+8656363 Msa0796610:CDS
CCTTCTTGGAATTCTTGGAT+GGG 0.498261 5_3:+8650964 Msa0796610:CDS
TGTTAATTTGGAATATCGTA+GGG 0.498991 5_3:-8649437 None:intergenic
CATTCAATATTCTTCACGGT+TGG 0.499725 5_3:+8655359 Msa0796610:CDS
TTGTGGGTTCGGCTTTGCAA+TGG 0.501115 5_3:+8656420 Msa0796610:CDS
GAAACAGGTGGACTTATTGA+TGG 0.501429 5_3:-8656185 None:intergenic
TGAATTACATCTATGGAAAA+GGG 0.502725 5_3:+8651425 Msa0796610:CDS
GCAGATAAACCAGTAGACTT+TGG 0.503117 5_3:-8655921 None:intergenic
CAGTCAGAGTCACTTCGAAC+AGG 0.503637 5_3:+8654565 Msa0796610:CDS
CTCAATATTTAGAAATTCAA+GGG 0.504248 5_3:+8649958 Msa0796610:CDS
CTCAATATTTAGAAATTCAA+GGG 0.504248 5_3:+8654662 Msa0796610:CDS
ATAAACCAGTAGACTTTGGT+TGG 0.504282 5_3:-8655917 None:intergenic
CAGTCAGAGTCACTTAGAAC+TGG 0.505114 5_3:+8649861 Msa0796610:CDS
CATTCAATATTCTTCACGGT+TGG 0.508130 5_3:+8650911 Msa0796610:CDS
GTCAAGACTATAGTGTCATC+CGG 0.508571 5_3:-8651698 None:intergenic
TAATTCACCTGTGGTTGAAA+AGG 0.521016 5_3:-8651409 None:intergenic
GAAACAGGTGGATTTATCAA+TGG 0.522659 5_3:-8651746 None:intergenic
AACCATACGGGCAAACATTG+TGG 0.523320 5_3:+8656403 Msa0796610:CDS
TTTGCAATGGGACAACCCGC+TGG 0.523400 5_3:+8656433 Msa0796610:CDS
CGGAGGTAGTTGTCCATCCA+AGG 0.524864 5_3:-8650883 None:intergenic
GATCATATGGCAATGAAAGA+TGG 0.528214 5_3:+8651924 Msa0796610:CDS
ATAAGTCCACCTGTTTCTGC+AGG 0.528684 5_3:+8656191 Msa0796610:CDS
GCATATTTCCACTAACCATA+CGG 0.529804 5_3:+8656390 Msa0796610:CDS
GATGACAAACCAATACACTT+TGG 0.530182 5_3:-8651479 None:intergenic
GTCCTGATTATAGTGTCATC+CGG 0.533366 5_3:-8656137 None:intergenic
AGAGGTAGAGTTGTACTCGT+TGG 0.533800 5_3:+8651770 Msa0796610:CDS
ATATTCCAAATTAACAATCA+AGG 0.535648 5_3:+8649444 Msa0796610:CDS
TGACTCCATTGATGGATCGA+TGG 0.537732 5_3:+8651717 Msa0796610:CDS
TTGTGCTCTTGAGGATGCAG+TGG 0.539243 5_3:+8651838 Msa0796610:CDS
TCCTAACAGAACACACCAGC+GGG 0.539378 5_3:-8656448 None:intergenic
CCTTATTGGAATTCTTGGAT+GGG 0.539919 5_3:+8655412 Msa0796610:CDS
TCCTCAAACAACCGAGCCAT+CGG 0.543389 5_3:+8651604 Msa0796610:CDS
AGGAGCATGTTGTGCTCTTG+AGG 0.544378 5_3:+8656268 Msa0796610:CDS
GTATATATTCAGGTATACAT+AGG 0.544796 5_3:-8656648 None:intergenic
GCAGGTAGAGTTGTACTCGT+TGG 0.545159 5_3:+8656209 Msa0796610:CDS
CAACCGTGAAGAATATTGAA+TGG 0.545947 5_3:-8650910 None:intergenic
GAAGCAAGCTAAGGATCTAG+TGG 0.546205 5_3:+8656073 Msa0796610:CDS
TTGTACTCGTTGGAGACGCC+TGG 0.546377 5_3:+8656219 Msa0796610:CDS
TCCTAAAATAACCGAGCCAT+CGG 0.546688 5_3:+8656043 Msa0796610:CDS
AACCATACTGGCAAACCTTG+TGG 0.548839 5_3:+8651964 Msa0796610:CDS
AAGAGGTGCGTGCAGTGGAG+AGG 0.550530 5_3:+8650844 Msa0796610:CDS
AAGAGGTGCGTGCAGTGGAG+AGG 0.550530 5_3:+8655292 Msa0796610:CDS
CTTGGATGGACAACTACCTC+CGG 0.550873 5_3:+8650884 Msa0796610:CDS
ACAAACTGAATTGAACATCA+TGG 0.551877 5_3:+8649342 Msa0796610:exon
ACTCCACCCATTCTTGAAAA+GGG 0.552204 5_3:-8654602 None:intergenic
TGTTGTGATTTCAAGAGTTG+GGG 0.553078 5_3:+8656585 Msa0796610:three_prime_UTR
CAAAGCCATCGATCCATCAA+TGG 0.553794 5_3:-8651722 None:intergenic
TTGTACTCGTTGGAGACGCT+TGG 0.555295 5_3:+8651780 Msa0796610:CDS
CAGCCAAGAGGTGCGTGCAG+TGG 0.558479 5_3:+8650839 Msa0796610:intron
CAGCCAAGAGGTGCGTGCAG+TGG 0.558479 5_3:+8655287 Msa0796610:intron
GTTGGTTATTGTGCTTTCCG+TGG 0.559926 5_3:+8651361 Msa0796610:CDS
TATTCAGGTATACATAGGGT+GGG 0.560382 5_3:-8656643 None:intergenic
TTTATATCCTATAATGGTCA+TGG 0.560462 5_3:-8656700 None:intergenic
GTCTACAAAGATGAAAATCA+AGG 0.561028 5_3:+8656540 Msa0796610:exon
TATGGAAAAGGGTTACGTGC+AGG 0.561657 5_3:+8651436 Msa0796610:CDS
TCTAGTAGAAAACTGGCCTC+CGG 0.564302 5_3:+8651649 Msa0796610:CDS
TGGGTCTAAAATACTTGCAA+AGG 0.566510 5_3:+8650983 Msa0796610:CDS
AAATTAGTGTGCTCCAGCAA+TGG 0.570234 5_3:-8656506 None:intergenic
TTCGATCGCCGATAGCTAAG+TGG 0.571348 5_3:+8651314 Msa0796610:CDS
AAGGAACATGTTGTAATCGT+GGG 0.573031 5_3:+8654391 Msa0796610:CDS
AAAGGAACATGTTGTAATCG+TGG 0.573135 5_3:+8654390 Msa0796610:CDS
TATATATTCAGGTATACATA+GGG 0.573689 5_3:-8656647 None:intergenic
GTACGACAAGGCAATGATGT+AGG 0.573750 5_3:-8649403 None:intergenic
AATCCCATCCACTTAGCTAT+CGG 0.574558 5_3:-8651322 None:intergenic
GGACTTGCCTCCTATTCAGA+TGG 0.575892 5_3:+8651382 Msa0796610:CDS
GGACTTGCCTCCTATTCAGA+TGG 0.575892 5_3:+8655824 Msa0796610:CDS
GCACGGGTGAATTACATCTA+CGG 0.577218 5_3:+8655860 Msa0796610:CDS
TGGGTCTAAACTAGTTGCAA+AGG 0.577733 5_3:+8655431 Msa0796610:CDS
AAGGCTGACAACACAATGAA+AGG 0.579807 5_3:+8656559 Msa0796610:three_prime_UTR
ATTATGTTTAGTAGCTCTGG+AGG 0.585207 5_3:-8656104 None:intergenic
CCATAGATGTAATTCACCTG+TGG 0.586219 5_3:-8651418 None:intergenic
AATCCCATCCACTTAGCTAT+CGG 0.586271 5_3:-8655764 None:intergenic
AAAGGAACATGTTGTAATCG+TGG 0.586526 5_3:+8649486 Msa0796610:CDS
AAGGAACATGTTGTAATCGT+GGG 0.588781 5_3:+8649487 Msa0796610:CDS
ATCGCCGATAGCTAAGTGGA+TGG 0.589305 5_3:+8651318 Msa0796610:CDS
GGTGCGTGCAGTGGAGAGGA+GGG 0.589579 5_3:+8650848 Msa0796610:CDS
GGTGCGTGCAGTGGAGAGGA+GGG 0.589579 5_3:+8655296 Msa0796610:CDS
ATCACCGATAGCTAAGTGGA+TGG 0.589651 5_3:+8655760 Msa0796610:CDS
ATTCAGGTATACATAGGGTG+GGG 0.591010 5_3:-8656642 None:intergenic
CCCATCCAAGAATTCCAAGA+AGG 0.591085 5_3:-8650964 None:intergenic
CATATTTCCACTAACCATAC+GGG 0.594920 5_3:+8656391 Msa0796610:CDS
ATGACTCCAAATCTTGGGCA+AGG 0.595031 5_3:+8651809 Msa0796610:CDS
ATGACTCCAAATCTTGGGCA+AGG 0.595031 5_3:+8656248 Msa0796610:CDS
TCAGAGTCACTTAGAACTGG+TGG 0.596903 5_3:+8649864 Msa0796610:CDS
AGGTTGTCCATCTGAATAGG+AGG 0.597237 5_3:-8651389 None:intergenic
AGGTTGTCCATCTGAATAGG+AGG 0.597237 5_3:-8655831 None:intergenic
ATAAATCCACCTGTTTCTAG+AGG 0.600625 5_3:+8651752 Msa0796610:CDS
TACGGAAAAGGGTTACGCGC+AGG 0.600680 5_3:+8655878 Msa0796610:CDS
GTTGGTCATTGTGCTTTCCG+TGG 0.600904 5_3:+8655803 Msa0796610:CDS
CTATCTATAACGTCGAGTGG+TGG 0.604110 5_3:-8649306 None:intergenic
CATGTTGTAATCGTGGGTGG+TGG 0.604156 5_3:+8649493 Msa0796610:CDS
CATGTTGTAATCGTGGGTGG+TGG 0.604156 5_3:+8654397 Msa0796610:CDS
GGACTCCGTTGATGGATCGA+TGG 0.604470 5_3:+8656156 Msa0796610:CDS
AAACATAATGAATTCTACAC+CGG 0.605859 5_3:+8656118 Msa0796610:CDS
TTGTGCTCTTGAGGATGCAG+TGG 0.611787 5_3:+8656277 Msa0796610:CDS
ACTAGAGTTGAAACCTGTGA+AGG 0.613474 5_3:-8649543 None:intergenic
ATATTCAGGTATACATAGGG+TGG 0.615654 5_3:-8656644 None:intergenic
TTCGATCACCGATAGCTAAG+TGG 0.615756 5_3:+8655756 Msa0796610:CDS
TCAATCTTCTGATGTCCGAA+AGG 0.615839 5_3:+8649468 Msa0796610:CDS
CAGATTGTAATAGGGTGCGA+CGG 0.616990 5_3:+8651289 Msa0796610:intron
CTAGAGTTGAAACCTGTGAA+GGG 0.619680 5_3:-8649542 None:intergenic
TCAGAGTCACTTCGAACAGG+TGG 0.621486 5_3:+8654568 Msa0796610:CDS
CAAAGCCATCGATCCATCAA+CGG 0.623139 5_3:-8656161 None:intergenic
CTAGAGTTGAAACCTGTGAA+GGG 0.625644 5_3:-8654446 None:intergenic
GAGATTGTAATAGGGTGCGA+TGG 0.625725 5_3:+8655731 Msa0796610:CDS
TCGCCGATAGCTAAGTGGAT+GGG 0.626839 5_3:+8651319 Msa0796610:CDS
TCACCGATAGCTAAGTGGAT+GGG 0.628133 5_3:+8655761 Msa0796610:CDS
GGTGCTAAAGAAGCAAGCTA+AGG 0.629803 5_3:+8651625 Msa0796610:CDS
GGTGCTAAAGAAGCAAGCTA+AGG 0.629803 5_3:+8656064 Msa0796610:CDS
AAACATAATGGATTCTACGC+CGG 0.635624 5_3:+8651679 Msa0796610:CDS
GCTAGAGTTGAAACCTGTGA+AGG 0.639052 5_3:-8654447 None:intergenic
ACAATCTCAATGTTTAGACA+TGG 0.640913 5_3:-8655716 None:intergenic
GATTGAACCAAGTCCAAATG+GGG 0.644561 5_3:+8650938 Msa0796610:CDS
GATTGAACCAAGTCCAAATG+GGG 0.644561 5_3:+8655386 Msa0796610:CDS
ATTTCAAAGAAAAGGACGAA+AGG 0.644711 5_3:+8650121 Msa0796610:CDS
ACGGATATTGTGCAGCCAAG+AGG 0.645003 5_3:+8655275 Msa0796610:intron
ATTATGTTTAGTAGCTCCGG+AGG 0.647657 5_3:-8651665 None:intergenic
CTGAATAGGAGGCAAGTCCA+CGG 0.650582 5_3:-8651378 None:intergenic
CTGAATAGGAGGCAAGTCCA+CGG 0.650582 5_3:-8655820 None:intergenic
GAATATTGAATGCTATCAGG+AGG 0.654073 5_3:-8655348 None:intergenic
TGGGCTATTGTGCAGCCAAG+AGG 0.656706 5_3:+8650827 Msa0796610:intron
ATTGTGTTGAAATCTGAGGA+TGG 0.657886 5_3:+8650078 Msa0796610:CDS
ACTCTACCTCTAGAAACAGG+TGG 0.665384 5_3:-8651758 None:intergenic
GAAGGGATAGAGCAGTTGCA+AGG 0.666482 5_3:-8649525 None:intergenic
GAAGGGATAGAGCAGTTGCA+AGG 0.666482 5_3:-8654429 None:intergenic
ACTCTACCTGCAGAAACAGG+TGG 0.672264 5_3:-8656197 None:intergenic
CAGGATTGTGTTGAAATCTG+AGG 0.674897 5_3:+8650074 Msa0796610:intron
GAATATTGAATGGTATCCGG+AGG 0.679865 5_3:-8650900 None:intergenic
ACTGCGAAATCGAACCCACA+AGG 0.681244 5_3:-8651979 None:intergenic
AGTCTATCTATAACGTCGAG+TGG 0.682111 5_3:-8649309 None:intergenic
GATCCAATTCTGGTACGACA+AGG 0.683776 5_3:-8649415 None:intergenic
TTCCTAACAGAACACACCAG+CGG 0.695061 5_3:-8656449 None:intergenic
ATGGTTAGTGGAAATATGCG+CGG 0.713230 5_3:-8656386 None:intergenic
GAACATGTTGTAATCGTGGG+TGG 0.726429 5_3:+8649490 Msa0796610:CDS
GAACATGTTGTAATCGTGGG+TGG 0.726429 5_3:+8654394 Msa0796610:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAGATATTTATCATTAT+TGG + chr5_3:8650217-8650236 Msa0796610:intron 10.0%
!! AATTATTTATGAAATGTATA+TGG + chr5_3:8650807-8650826 Msa0796610:intron 10.0%
!! ATTATTTATGAAATGTATAT+GGG + chr5_3:8650808-8650827 Msa0796610:intron 10.0%
!!! TAATCTTTTCTTAATAAAAT+TGG - chr5_3:8653107-8653126 None:intergenic 10.0%
!! TTTATTAAGAAAAGATTATT+TGG + chr5_3:8653109-8653128 Msa0796610:intron 10.0%
!!! TTTACATTCACTTTTTTATT+AGG - chr5_3:8650382-8650401 None:intergenic 15.0%
!!! ATATATTTGTCTTTTGTAAA+AGG - chr5_3:8650494-8650513 None:intergenic 15.0%
!! AACTTAGTTGAAAAAATATT+TGG + chr5_3:8651083-8651102 Msa0796610:intron 15.0%
!! GTAATTTAACTATATATGTA+TGG - chr5_3:8651540-8651559 None:intergenic 15.0%
!! TAAATGAAAGAAAAGAAAAA+AGG + chr5_3:8652457-8652476 Msa0796610:intron 15.0%
!!! AATTTTAACATAAATTTCAG+GGG - chr5_3:8652614-8652633 None:intergenic 15.0%
!!! CAATTTTAACATAAATTTCA+GGG - chr5_3:8652615-8652634 None:intergenic 15.0%
!!! AAATTTTAACATCGTAAATT+TGG + chr5_3:8652679-8652698 Msa0796610:intron 15.0%
!!! AAAAGAAAAAGCATTTAATT+TGG + chr5_3:8653277-8653296 Msa0796610:intron 15.0%
!! TTCTAAATTCATATAGAATT+AGG - chr5_3:8653633-8653652 None:intergenic 15.0%
!!! CAAAACAAACTATTAAATTT+TGG + chr5_3:8653856-8653875 Msa0796610:intron 15.0%
!! AATATTTATGAAATGCATAA+CGG + chr5_3:8655256-8655275 Msa0796610:intron 15.0%
!! TTGTAAATCTAATAAAATCA+TGG - chr5_3:8655507-8655526 None:intergenic 15.0%
!!! TTTTATTAGATTTACAAAGT+TGG + chr5_3:8655510-8655529 Msa0796610:intron 15.0%
!! ATTAAGTTTATATCCTATAA+TGG - chr5_3:8656709-8656728 None:intergenic 15.0%
!! ATATTCCAAATTAACAATCA+AGG + chr5_3:8649444-8649463 Msa0796610:CDS 20.0%
!! ACTCAATATTTAGAAATTCA+AGG + chr5_3:8649957-8649976 Msa0796610:CDS 20.0%
!! CTCAATATTTAGAAATTCAA+GGG + chr5_3:8649958-8649977 Msa0796610:CDS 20.0%
!!! CTAAATAATGTAGAGTTTTA+TGG - chr5_3:8650262-8650281 None:intergenic 20.0%
!! AAATTCATTTCTAAATTGTG+GGG - chr5_3:8650322-8650341 None:intergenic 20.0%
!! GAAATTCATTTCTAAATTGT+GGG - chr5_3:8650323-8650342 None:intergenic 20.0%
!! TGAAATTCATTTCTAAATTG+TGG - chr5_3:8650324-8650343 None:intergenic 20.0%
!! TTACAAAAGACAAATATATG+AGG + chr5_3:8650495-8650514 Msa0796610:intron 20.0%
!! TACAAAAGACAAATATATGA+GGG + chr5_3:8650496-8650515 Msa0796610:intron 20.0%
!! AGTTCGTAAAAAATTAATCA+CGG - chr5_3:8651067-8651086 None:intergenic 20.0%
!! AAAAAGTTTATTAGTGTAGT+TGG + chr5_3:8652299-8652318 Msa0796610:intron 20.0%
!! TCTTTCATTTAGCAAAAATA+AGG - chr5_3:8652448-8652467 None:intergenic 20.0%
!!! AAAAGGTAATCAATTTTCTA+AGG + chr5_3:8652474-8652493 Msa0796610:intron 20.0%
!!! ATTTTCTAAGGTGAATTTTA+TGG + chr5_3:8652486-8652505 Msa0796610:intron 20.0%
!!! GCAATTTTAACATAAATTTC+AGG - chr5_3:8652616-8652635 None:intergenic 20.0%
!!! TACTCAAAAAATTTTACCTT+TGG + chr5_3:8652760-8652779 Msa0796610:intron 20.0%
!!! ACTCAAAAAATTTTACCTTT+GGG + chr5_3:8652761-8652780 Msa0796610:intron 20.0%
!! TATATATTCAAGTGTACATA+CGG - chr5_3:8652981-8653000 None:intergenic 20.0%
!! ACAAATCAAAATACATTGTT+TGG + chr5_3:8653409-8653428 Msa0796610:intron 20.0%
!! ACATTCAATTTCATTATGAA+AGG - chr5_3:8653546-8653565 None:intergenic 20.0%
!!! AACTATTAAATTTTGGCAAA+TGG + chr5_3:8653863-8653882 Msa0796610:intron 20.0%
!!! TTTGTTTTGGAAAATTACTA+CGG - chr5_3:8654139-8654158 None:intergenic 20.0%
!! ACTCAATATTTAGAAATTCA+AGG + chr5_3:8649957-8649976 Msa0796610:CDS 20.0%
!! CTCAATATTTAGAAATTCAA+GGG + chr5_3:8649958-8649977 Msa0796610:CDS 20.0%
!!! TTTTCACTTCTTAATACAAT+GGG - chr5_3:8655131-8655150 None:intergenic 20.0%
!!! TTTTTCACTTCTTAATACAA+TGG - chr5_3:8655132-8655151 None:intergenic 20.0%
!! TATTAAGAAGTGAAAAATTG+TGG + chr5_3:8655135-8655154 Msa0796610:intron 20.0%
!! ATTAAGAAGTGAAAAATTGT+GGG + chr5_3:8655136-8655155 Msa0796610:intron 20.0%
!! TTTCGTTGTTAAATTATTGT+TGG + chr5_3:8655230-8655249 Msa0796610:intron 20.0%
!!! TCAATTTGTTAACACTTTTT+AGG - chr5_3:8655694-8655713 None:intergenic 20.0%
!! TAAACATTGAGATTGTAATA+GGG + chr5_3:8655723-8655742 Msa0796610:CDS 20.0%
!! TATATATTCAGGTATACATA+GGG - chr5_3:8656650-8656669 None:intergenic 20.0%
!! TGAATATTGTGTATATATTC+AGG - chr5_3:8656661-8656680 None:intergenic 20.0%
!!! GTATTGAAATTTTCCATATT+TGG + chr5_3:8656732-8656751 Msa0796610:three_prime_UTR 20.0%
!! AATCATTAGGTTAAATAAAG+AGG - chr5_3:8656798-8656817 None:intergenic 20.0%
!!! TCTTTATTTAACCTAATGAT+TGG + chr5_3:8656797-8656816 Msa0796610:three_prime_UTR 20.0%
!! TGTTAATTTGGAATATCGTA+GGG - chr5_3:8649440-8649459 None:intergenic 25.0%
!! TTGTTAATTTGGAATATCGT+AGG - chr5_3:8649441-8649460 None:intergenic 25.0%
! ATTAAACTCTCAACTATTAG+CGG - chr5_3:8649630-8649649 None:intergenic 25.0%
!! TGCTTTGAATTTCAAAGAAA+AGG + chr5_3:8650113-8650132 Msa0796610:CDS 25.0%
!!! TATCATTATTGGTTTTTGTC+CGG + chr5_3:8650228-8650247 Msa0796610:intron 25.0%
! AAAGAAAGACAAAAATCTGA+AGG + chr5_3:8650413-8650432 Msa0796610:intron 25.0%
! AATCATTTATAAACTATCCC+TGG - chr5_3:8650694-8650713 None:intergenic 25.0%
! TTTAGTCATTGATACATAGT+TGG + chr5_3:8650782-8650801 Msa0796610:intron 25.0%
! ATACCATTCAATATTCTTCA+CGG + chr5_3:8650907-8650926 Msa0796610:CDS 25.0%
!! ATTGACTCATTGTGATTTAT+GGG + chr5_3:8651012-8651031 Msa0796610:intron 25.0%
! AAAGGATCTTACAAACATAA+TGG + chr5_3:8651208-8651227 Msa0796610:intron 25.0%
!!! TCAATTTGTTAGCAGTTTTT+AGG - chr5_3:8651256-8651275 None:intergenic 25.0%
! TGAATTACATCTATGGAAAA+GGG + chr5_3:8651425-8651444 Msa0796610:CDS 25.0%
! TTTCATCTGAACAATAAACT+CGG - chr5_3:8651562-8651581 None:intergenic 25.0%
! TGAAAAATAGTTGAGTTCTA+TGG + chr5_3:8651577-8651596 Msa0796610:intron 25.0%
!!! TATTTCATTTGAGTTGCTTA+CGG + chr5_3:8652191-8652210 Msa0796610:intron 25.0%
!! AAGAGTGAGTAAAAATGTTT+TGG + chr5_3:8652553-8652572 Msa0796610:intron 25.0%
!!! AAAAAATTTTACCTTTGGGA+TGG + chr5_3:8652765-8652784 Msa0796610:intron 25.0%
! AATAGTTAAATTGTGAGCTA+TGG + chr5_3:8653013-8653032 Msa0796610:intron 25.0%
!!! AGAAAAAGCATTTAATTTGG+TGG + chr5_3:8653280-8653299 Msa0796610:intron 25.0%
! ACATGATATATAGCTCAAAA+GGG + chr5_3:8653361-8653380 Msa0796610:intron 25.0%
! ATCAAAATACATTGTTTGGT+CGG + chr5_3:8653413-8653432 Msa0796610:intron 25.0%
! AATACATTCTGCTACAATAT+CGG - chr5_3:8653591-8653610 None:intergenic 25.0%
! CACACATCAAAATACATTTA+CGG + chr5_3:8653705-8653724 Msa0796610:intron 25.0%
! AACTAAAAAGTTTATCCACA+CGG + chr5_3:8654080-8654099 Msa0796610:intron 25.0%
! GATTTAAGAATCATAAAACG+AGG - chr5_3:8654301-8654320 None:intergenic 25.0%
! AATATATGCATTGTGCAATA+AGG - chr5_3:8654724-8654743 None:intergenic 25.0%
! TTATCCACACATCATATATA+TGG - chr5_3:8655018-8655037 None:intergenic 25.0%
!! ATCTTAGATATTTTCACTAC+TGG + chr5_3:8655049-8655068 Msa0796610:intron 25.0%
! TCAAATGATAAAATGATGCA+TGG - chr5_3:8655183-8655202 None:intergenic 25.0%
!!! TATCATTTGAGTTGTACTAA+TGG + chr5_3:8655193-8655212 Msa0796610:intron 25.0%
!!! ATCATTTGAGTTGTACTAAT+GGG + chr5_3:8655194-8655213 Msa0796610:intron 25.0%
! ATAGCATTCAATATTCTTCA+CGG + chr5_3:8655355-8655374 Msa0796610:CDS 25.0%
!! AGGTTAGTCATTGTAATTTA+TGG + chr5_3:8655451-8655470 Msa0796610:intron 25.0%
! ATTGTAATTTATGGTGTGTT+TGG + chr5_3:8655460-8655479 Msa0796610:intron 25.0%
! GAATTATGTTTAAACACAGT+CGG - chr5_3:8655560-8655579 None:intergenic 25.0%
! TATTAATCTAACCACATGAT+TGG + chr5_3:8655600-8655619 Msa0796610:intron 25.0%
! CTAAACATTGAGATTGTAAT+AGG + chr5_3:8655722-8655741 Msa0796610:CDS 25.0%
! GTTACTAATAAGTCCATATA+TGG + chr5_3:8655966-8655985 Msa0796610:intron 25.0%
! TCAGGTAATTTAACCATATA+TGG - chr5_3:8655982-8656001 None:intergenic 25.0%
! TTCATATGAACAATAAACTC+AGG - chr5_3:8656000-8656019 None:intergenic 25.0%
! TGAAAAATAGTTGAGTTCAA+TGG + chr5_3:8656016-8656035 Msa0796610:intron 25.0%
! AAACATAATGAATTCTACAC+CGG + chr5_3:8656118-8656137 Msa0796610:CDS 25.0%
! GTATATATTCAGGTATACAT+AGG - chr5_3:8656651-8656670 None:intergenic 25.0%
! TTTATATCCTATAATGGTCA+TGG - chr5_3:8656703-8656722 None:intergenic 25.0%
! CTAGCACTTATAAAGTTATA+TGG + chr5_3:8656765-8656784 Msa0796610:three_prime_UTR 25.0%
ACAAACTGAATTGAACATCA+TGG + chr5_3:8649342-8649361 Msa0796610:exon 30.0%
TTGAGCCTTGATTGTTAATT+TGG - chr5_3:8649452-8649471 None:intergenic 30.0%
TGGTGATAAAGAATAGATTG+AGG - chr5_3:8649570-8649589 None:intergenic 30.0%
! CCATCATTACTTTGATAACA+CGG + chr5_3:8649587-8649606 Msa0796610:intron 30.0%
GATATAAGAATTGTGCAACA+AGG - chr5_3:8650019-8650038 None:intergenic 30.0%
GTTCATAAATTTGGCTATAC+AGG + chr5_3:8650055-8650074 Msa0796610:intron 30.0%
ATTTCAAAGAAAAGGACGAA+AGG + chr5_3:8650121-8650140 Msa0796610:CDS 30.0%
GAAATGAATTTCACATGAAG+TGG + chr5_3:8650331-8650350 Msa0796610:intron 30.0%
!! GAAGTATTGTGCTTTGTAAA+AGG - chr5_3:8650736-8650755 None:intergenic 30.0%
AGCACAATACTTCGAAAATT+TGG + chr5_3:8650743-8650762 Msa0796610:intron 30.0%
AATACTTCGAAAATTTGGCT+TGG + chr5_3:8650748-8650767 Msa0796610:intron 30.0%
! ATACTTCGAAAATTTGGCTT+GGG + chr5_3:8650749-8650768 Msa0796610:intron 30.0%
GAAGAATATTGAATGGTATC+CGG - chr5_3:8650906-8650925 None:intergenic 30.0%
!! CATTGACTCATTGTGATTTA+TGG + chr5_3:8651011-8651030 Msa0796610:intron 30.0%
TTGACTCATTGTGATTTATG+GGG + chr5_3:8651013-8651032 Msa0796610:intron 30.0%
CTAAAAACATAGTGCACAAA+AGG + chr5_3:8651190-8651209 Msa0796610:intron 30.0%
ATGTCTCAACAGATTGTAAT+AGG + chr5_3:8651280-8651299 Msa0796610:intron 30.0%
TGTCTCAACAGATTGTAATA+GGG + chr5_3:8651281-8651300 Msa0796610:intron 30.0%
GTGAATTACATCTATGGAAA+AGG + chr5_3:8651424-8651443 Msa0796610:CDS 30.0%
CATATTTCCAATAACCATAC+TGG + chr5_3:8651952-8651971 Msa0796610:CDS 30.0%
ATGTTAGGAACAATATTGTC+AGG + chr5_3:8652023-8652042 Msa0796610:intron 30.0%
TGTTAGGAACAATATTGTCA+GGG + chr5_3:8652024-8652043 Msa0796610:intron 30.0%
ATCATTGAAATCAACATGAG+TGG - chr5_3:8652232-8652251 None:intergenic 30.0%
! ATACTATGATGATGCCTTAT+CGG + chr5_3:8652529-8652548 Msa0796610:intron 30.0%
! TTTTGGATAGATCACATAGA+AGG + chr5_3:8652570-8652589 Msa0796610:intron 30.0%
! TTTTCATCTTTGTAGACTCT+CGG - chr5_3:8652891-8652910 None:intergenic 30.0%
GTCTACAAAGATGAAAATCA+AGG + chr5_3:8652894-8652913 Msa0796610:intron 30.0%
TCATTTGAACTTGGAAAGTT+GGG - chr5_3:8653174-8653193 None:intergenic 30.0%
TCATCATTCTCATTTGAACT+TGG - chr5_3:8653183-8653202 None:intergenic 30.0%
!! AATGATGGGTGTAGTAATTA+AGG - chr5_3:8653327-8653346 None:intergenic 30.0%
CTTTGACTATTGACAATGAT+GGG - chr5_3:8653341-8653360 None:intergenic 30.0%
TCTTTGACTATTGACAATGA+TGG - chr5_3:8653342-8653361 None:intergenic 30.0%
GACATGATATATAGCTCAAA+AGG + chr5_3:8653360-8653379 Msa0796610:intron 30.0%
TATTGTAGCAGAATGTATTC+AGG + chr5_3:8653592-8653611 Msa0796610:intron 30.0%
! ACTTAACATCATCGATTGAA+TGG - chr5_3:8654047-8654066 None:intergenic 30.0%
CAGAAGTTCCAAATTAATCA+AGG + chr5_3:8654351-8654370 Msa0796610:CDS 30.0%
AGATTGAGCCTTGATTAATT+TGG - chr5_3:8654362-8654381 None:intergenic 30.0%
!! ATCCTCTTCTTTGAAATTGA+AGG - chr5_3:8654823-8654842 None:intergenic 30.0%
GTTAGTGCAGTATTTGATAT+TGG + chr5_3:8654956-8654975 Msa0796610:intron 30.0%
! ATTTGATATTGGTGCTTGAT+AGG + chr5_3:8654967-8654986 Msa0796610:intron 30.0%
!!! TATATGGATGGACCTTTTTT+TGG - chr5_3:8655002-8655021 None:intergenic 30.0%
! TTTTCTTCTTCCTACCAAAT+AGG + chr5_3:8655087-8655106 Msa0796610:intron 30.0%
ATAAAATGATGCATGGACAT+CGG - chr5_3:8655176-8655195 None:intergenic 30.0%
GAAGAATATTGAATGCTATC+AGG - chr5_3:8655354-8655373 None:intergenic 30.0%
! AAGTTGGTTGACAAAACATT+TGG + chr5_3:8655526-8655545 Msa0796610:intron 30.0%
! TTTTGTGCAGTATGTTTTCA+GGG - chr5_3:8655632-8655651 None:intergenic 30.0%
ACAATCTCAATGTTTAGACA+TGG - chr5_3:8655719-8655738 None:intergenic 30.0%
TGAATTACATCTACGGAAAA+GGG + chr5_3:8655867-8655886 Msa0796610:CDS 30.0%
TTCATTATGTTTAGTAGCTC+TGG - chr5_3:8656110-8656129 None:intergenic 30.0%
GTCTACAAAGATGAAAATCA+AGG + chr5_3:8652894-8652913 Msa0796610:intron 30.0%
ATTGTTGTGATTTCAAGAGT+TGG + chr5_3:8656583-8656602 Msa0796610:three_prime_UTR 30.0%
TTGTTGTGATTTCAAGAGTT+GGG + chr5_3:8656584-8656603 Msa0796610:three_prime_UTR 30.0%
AGAAATACCATGACCATTAT+AGG + chr5_3:8656693-8656712 Msa0796610:three_prime_UTR 30.0%
TAGCTGTATGTATCCAAATA+TGG - chr5_3:8656748-8656767 None:intergenic 30.0%
CGATTACAACATGTTCCTTT+CGG - chr5_3:8649486-8649505 None:intergenic 35.0%
AAAGGAACATGTTGTAATCG+TGG + chr5_3:8649486-8649505 Msa0796610:CDS 35.0%
AAGGAACATGTTGTAATCGT+GGG + chr5_3:8649487-8649506 Msa0796610:CDS 35.0%
CCGTGTTATCAAAGTAATGA+TGG - chr5_3:8649590-8649609 None:intergenic 35.0%
!! GTTGAACTTGTTGAATTTCC+AGG + chr5_3:8649811-8649830 Msa0796610:intron 35.0%
! CTTGAGCTGGTTCATAAATT+TGG + chr5_3:8650046-8650065 Msa0796610:intron 35.0%
ATTGTGTTGAAATCTGAGGA+TGG + chr5_3:8650078-8650097 Msa0796610:CDS 35.0%
AGGTATATAATTCTGCTGTG+TGG + chr5_3:8650141-8650160 Msa0796610:intron 35.0%
TGGTTAGATCCATATGACAT+TGG + chr5_3:8650351-8650370 Msa0796610:intron 35.0%
TAGGTGAAACCAATGTCATA+TGG - chr5_3:8650363-8650382 None:intergenic 35.0%
!! ATACCCTTTAGCCTTAACTA+GGG + chr5_3:8650619-8650638 Msa0796610:intron 35.0%
!!! TGAGAGGTTTTTTAGTCTAC+TGG - chr5_3:8650654-8650673 None:intergenic 35.0%
!! TTTGTAAAAGGCGTCTTCAT+AGG - chr5_3:8650724-8650743 None:intergenic 35.0%
CAACCGTGAAGAATATTGAA+TGG - chr5_3:8650913-8650932 None:intergenic 35.0%
CATTCAATATTCTTCACGGT+TGG + chr5_3:8650911-8650930 Msa0796610:CDS 35.0%
AAGATTGAACCAAGTCCAAA+TGG + chr5_3:8650936-8650955 Msa0796610:CDS 35.0%
AGATTGAACCAAGTCCAAAT+GGG + chr5_3:8650937-8650956 Msa0796610:CDS 35.0%
! TGGGTCTAAAATACTTGCAA+AGG + chr5_3:8650983-8651002 Msa0796610:CDS 35.0%
AAAAGGTTGTCCATCTGAAT+AGG - chr5_3:8651395-8651414 None:intergenic 35.0%
TAATTCACCTGTGGTTGAAA+AGG - chr5_3:8651412-8651431 None:intergenic 35.0%
TTTCTCCAACCAAAGTGTAT+TGG + chr5_3:8651470-8651489 Msa0796610:CDS 35.0%
ACAAACCAATACACTTTGGT+TGG - chr5_3:8651478-8651497 None:intergenic 35.0%
GATGACAAACCAATACACTT+TGG - chr5_3:8651482-8651501 None:intergenic 35.0%
ATCTTCAATAGTTCATCTGC+AGG + chr5_3:8651499-8651518 Msa0796610:CDS 35.0%
AAATAGTTGAGTTCTATGGC+AGG + chr5_3:8651581-8651600 Msa0796610:intron 35.0%
CTAAGGATCTAGTAGAAAAC+TGG + chr5_3:8651642-8651661 Msa0796610:CDS 35.0%
TCCATTATGTTTAGTAGCTC+CGG - chr5_3:8651671-8651690 None:intergenic 35.0%
!! AAACATAATGGATTCTACGC+CGG + chr5_3:8651679-8651698 Msa0796610:CDS 35.0%
! TATAGTCTTGACTCCATTGA+TGG + chr5_3:8651709-8651728 Msa0796610:CDS 35.0%
! GAAACAGGTGGATTTATCAA+TGG - chr5_3:8651749-8651768 None:intergenic 35.0%
!! ATAAATCCACCTGTTTCTAG+AGG + chr5_3:8651752-8651771 Msa0796610:CDS 35.0%
ATCCAATGACTCCAAATCTT+GGG + chr5_3:8651804-8651823 Msa0796610:CDS 35.0%
! GAAGACGCTTTTAGATCATA+TGG + chr5_3:8651911-8651930 Msa0796610:CDS 35.0%
GATCATATGGCAATGAAAGA+TGG + chr5_3:8651924-8651943 Msa0796610:CDS 35.0%
AGAGCGAGGAAAAATAGTTA+AGG + chr5_3:8652049-8652068 Msa0796610:intron 35.0%
GAGCGAGGAAAAATAGTTAA+GGG + chr5_3:8652050-8652069 Msa0796610:intron 35.0%
TTTACTCACTCTTTCCGATA+AGG - chr5_3:8652546-8652565 None:intergenic 35.0%
TCCCCTAATTCTATGTACTT+TGG + chr5_3:8652793-8652812 Msa0796610:intron 35.0%
CCCAAAGTACATAGAATTAG+GGG - chr5_3:8652797-8652816 None:intergenic 35.0%
CCCCTAATTCTATGTACTTT+GGG + chr5_3:8652794-8652813 Msa0796610:intron 35.0%
CCCCAAAGTACATAGAATTA+GGG - chr5_3:8652798-8652817 None:intergenic 35.0%
CCCTAATTCTATGTACTTTG+GGG + chr5_3:8652795-8652814 Msa0796610:intron 35.0%
ACCCCAAAGTACATAGAATT+AGG - chr5_3:8652799-8652818 None:intergenic 35.0%
TGTTGTGATGTCAAGAGTTA+AGG + chr5_3:8652936-8652955 Msa0796610:intron 35.0%
ATTCAAGTGTACATACGGTA+GGG - chr5_3:8652976-8652995 None:intergenic 35.0%
TATTCAAGTGTACATACGGT+AGG - chr5_3:8652977-8652996 None:intergenic 35.0%
TAAATTGTGAGCTATGGCTT+TGG + chr5_3:8653019-8653038 Msa0796610:intron 35.0%
AAATTGTGAGCTATGGCTTT+GGG + chr5_3:8653020-8653039 Msa0796610:intron 35.0%
TATCATGTGCATTGCAATGT+TGG - chr5_3:8653048-8653067 None:intergenic 35.0%
CTCATTTGAACTTGGAAAGT+TGG - chr5_3:8653175-8653194 None:intergenic 35.0%
CTCAAGTTAGCAAGTTTCAT+GGG - chr5_3:8653224-8653243 None:intergenic 35.0%
TCTCAAGTTAGCAAGTTTCA+TGG - chr5_3:8653225-8653244 None:intergenic 35.0%
!! GAAACTTGCTAACTTGAGAA+AGG + chr5_3:8653226-8653245 Msa0796610:intron 35.0%
TGCTAACTTGAGAAAGGATA+CGG + chr5_3:8653232-8653251 Msa0796610:intron 35.0%
TAGTAATTAAGGTGCGATAG+TGG - chr5_3:8653316-8653335 None:intergenic 35.0%
TGAAAGGTTATTTGTCGTGA+AGG - chr5_3:8653530-8653549 None:intergenic 35.0%
CATTGTCAATGTAACCTGTT+TGG - chr5_3:8653821-8653840 None:intergenic 35.0%
!!! TTTTGAGGTGGTTGAACATT+GGG - chr5_3:8653974-8653993 None:intergenic 35.0%
!!! AAGAGTAACTTGTTTTGAGG+TGG - chr5_3:8653986-8654005 None:intergenic 35.0%
ACCTCAAAACAAGTTACTCT+TGG + chr5_3:8653985-8654004 Msa0796610:intron 35.0%
!!! TCCAAGAGTAACTTGTTTTG+AGG - chr5_3:8653989-8654008 None:intergenic 35.0%
!!! GTAGTGGATACGTTTTGTTT+TGG - chr5_3:8654152-8654171 None:intergenic 35.0%
! CGATTACAACATGTTCCTTT+TGG - chr5_3:8649486-8649505 None:intergenic 35.0%
AAAGGAACATGTTGTAATCG+TGG + chr5_3:8649486-8649505 Msa0796610:CDS 35.0%
AAGGAACATGTTGTAATCGT+GGG + chr5_3:8649487-8649506 Msa0796610:CDS 35.0%
TGGAGTGTACTTGATTCAAT+TGG + chr5_3:8654619-8654638 Msa0796610:CDS 35.0%
GTTCATAATATCAGCTGTAC+AGG + chr5_3:8654760-8654779 Msa0796610:intron 35.0%
ATAATATCAGCTGTACAGGA+TGG + chr5_3:8654764-8654783 Msa0796610:intron 35.0%
TGCCTTCAATTTCAAAGAAG+AGG + chr5_3:8654818-8654837 Msa0796610:intron 35.0%
!! ACATTTTCAGTCAGAAGTGT+TGG - chr5_3:8654871-8654890 None:intergenic 35.0%
ACTTCTGACTGAAAATGTGT+TGG + chr5_3:8654873-8654892 Msa0796610:intron 35.0%
! CTTGTGTTGGTATCAAACAT+TGG - chr5_3:8654912-8654931 None:intergenic 35.0%
CCACACATCATATATATGGA+TGG - chr5_3:8655014-8655033 None:intergenic 35.0%
CCATCCATATATATGATGTG+TGG + chr5_3:8655011-8655030 Msa0796610:intron 35.0%
TAAAATGATGCATGGACATC+GGG - chr5_3:8655175-8655194 None:intergenic 35.0%
TTGTACTAATGGGACGTTAT+TGG + chr5_3:8655204-8655223 Msa0796610:intron 35.0%
GAATATTGAATGCTATCAGG+AGG - chr5_3:8655351-8655370 None:intergenic 35.0%
CATTCAATATTCTTCACGGT+TGG + chr5_3:8650911-8650930 Msa0796610:CDS 35.0%
AAGATTGAACCAAGTCCAAA+TGG + chr5_3:8650936-8650955 Msa0796610:CDS 35.0%
AGATTGAACCAAGTCCAAAT+GGG + chr5_3:8650937-8650956 Msa0796610:CDS 35.0%
GGATACCTTATTGGAATTCT+TGG + chr5_3:8655407-8655426 Msa0796610:CDS 35.0%
ACCTTATTGGAATTCTTGGA+TGG + chr5_3:8655411-8655430 Msa0796610:CDS 35.0%
CCTTATTGGAATTCTTGGAT+GGG + chr5_3:8655412-8655431 Msa0796610:CDS 35.0%
! CTTTTGTGCAGTATGTTTTC+AGG - chr5_3:8655633-8655652 None:intergenic 35.0%
CTGAAAACATACTGCACAAA+AGG + chr5_3:8655631-8655650 Msa0796610:intron 35.0%
TAGGACTAAAGCTTCAGAAT+TGG - chr5_3:8655675-8655694 None:intergenic 35.0%
! TTTTCTGAGCCAAAGTTTGT+TGG + chr5_3:8655785-8655804 Msa0796610:CDS 35.0%
AAAAGGTTGTCCATCTGAAT+AGG - chr5_3:8651395-8651414 None:intergenic 35.0%
GTGAATTACATCTACGGAAA+AGG + chr5_3:8655866-8655885 Msa0796610:CDS 35.0%
ATAAACCAGTAGACTTTGGT+TGG - chr5_3:8655920-8655939 None:intergenic 35.0%
TGGACTTATTAGTAACAACC+TGG - chr5_3:8655962-8655981 None:intergenic 35.0%
AAATAGTTGAGTTCAATGGC+AGG + chr5_3:8656020-8656039 Msa0796610:intron 35.0%
!! ATTATGTTTAGTAGCTCTGG+AGG - chr5_3:8656107-8656126 None:intergenic 35.0%
!! GAAGACGCTTTTAGAGAATA+TGG + chr5_3:8656350-8656369 Msa0796610:CDS 35.0%
GAGAATATGGCAATGAAAGA+TGG + chr5_3:8656363-8656382 Msa0796610:CDS 35.0%
GCATATTTCCACTAACCATA+CGG + chr5_3:8656390-8656409 Msa0796610:CDS 35.0%
CATATTTCCACTAACCATAC+GGG + chr5_3:8656391-8656410 Msa0796610:CDS 35.0%
TTGTCATACCTAAGCTAGTA+AGG + chr5_3:8656477-8656496 Msa0796610:CDS 35.0%
TGTTGTGATTTCAAGAGTTG+GGG + chr5_3:8656585-8656604 Msa0796610:three_prime_UTR 35.0%
TATTCAGGTATACATAGGGT+GGG - chr5_3:8656646-8656665 None:intergenic 35.0%
ATATTCAGGTATACATAGGG+TGG - chr5_3:8656647-8656666 None:intergenic 35.0%
AGTCTATCTATAACGTCGAG+TGG - chr5_3:8649312-8649331 None:intergenic 40.0%
ATATCGTAGGGATCCAATTC+TGG - chr5_3:8649428-8649447 None:intergenic 40.0%
TCAATCTTCTGATGTCCGAA+AGG + chr5_3:8649468-8649487 Msa0796610:CDS 40.0%
CTAGAGTTGAAACCTGTGAA+GGG - chr5_3:8649545-8649564 None:intergenic 40.0%
ACTAGAGTTGAAACCTGTGA+AGG - chr5_3:8649546-8649565 None:intergenic 40.0%
GTGTTATCAGCTATGAAGCA+CGG - chr5_3:8649781-8649800 None:intergenic 40.0%
! ACTTGTTGAATTTCCAGGCT+TGG + chr5_3:8649816-8649835 Msa0796610:intron 40.0%
TCACTCACCCTTTCCAAAAA+TGG + chr5_3:8649891-8649910 Msa0796610:CDS 40.0%
CACTCACCCTTTCCAAAAAT+GGG + chr5_3:8649892-8649911 Msa0796610:CDS 40.0%
CAGGATTGTGTTGAAATCTG+AGG + chr5_3:8650074-8650093 Msa0796610:intron 40.0%
AGAAACTGAGACTAAGTCGT+CGG + chr5_3:8650280-8650299 Msa0796610:intron 40.0%
!!! TGTCTTTTGTAAAAGGTGCC+CGG - chr5_3:8650487-8650506 None:intergenic 40.0%
! TGAGGGTTTTTACAACTCTG+TGG + chr5_3:8650513-8650532 Msa0796610:intron 40.0%
!! CATACCCTTTAGCCTTAACT+AGG + chr5_3:8650618-8650637 Msa0796610:intron 40.0%
!! TACCCTTTAGCCTTAACTAG+GGG + chr5_3:8650620-8650639 Msa0796610:intron 40.0%
CTTGATTCTCAAGCAATGAG+AGG - chr5_3:8650670-8650689 None:intergenic 40.0%
CTCTCATTGCTTGAGAATCA+AGG + chr5_3:8650668-8650687 Msa0796610:intron 40.0%
!! TCGAAAATTTGGCTTGGGTT+CGG + chr5_3:8650754-8650773 Msa0796610:intron 40.0%
!! GTACTTTTGGAAACCTTGGA+TGG + chr5_3:8650870-8650889 Msa0796610:CDS 40.0%
GAATATTGAATGGTATCCGG+AGG - chr5_3:8650903-8650922 None:intergenic 40.0%
GATTGAACCAAGTCCAAATG+GGG + chr5_3:8650938-8650957 Msa0796610:CDS 40.0%
GGATACCTTCTTGGAATTCT+TGG + chr5_3:8650959-8650978 Msa0796610:CDS 40.0%
ACCTTCTTGGAATTCTTGGA+TGG + chr5_3:8650963-8650982 Msa0796610:CDS 40.0%
CCTTCTTGGAATTCTTGGAT+GGG + chr5_3:8650964-8650983 Msa0796610:CDS 40.0%
AAGCTAACCACATGCATGAT+TGG + chr5_3:8651159-8651178 Msa0796610:intron 40.0%
GTCATAACCAATCATGCATG+TGG - chr5_3:8651169-8651188 None:intergenic 40.0%
GACCAGAGCTTCATGATTAT+TGG - chr5_3:8651234-8651253 None:intergenic 40.0%
AATCCCATCCACTTAGCTAT+CGG - chr5_3:8651325-8651344 None:intergenic 40.0%
! TTTTCTGAGCCAAAGTACGT+TGG + chr5_3:8651343-8651362 Msa0796610:CDS 40.0%
GCACAATAACCAACGTACTT+TGG - chr5_3:8651355-8651374 None:intergenic 40.0%
CCATAGATGTAATTCACCTG+TGG - chr5_3:8651421-8651440 None:intergenic 40.0%
CCACAGGTGAATTACATCTA+TGG + chr5_3:8651418-8651437 Msa0796610:CDS 40.0%
TACACTTTGGTTGGAGAAAC+AGG - chr5_3:8651469-8651488 None:intergenic 40.0%
ATTATGTTTAGTAGCTCCGG+AGG - chr5_3:8651668-8651687 None:intergenic 40.0%
TCCGGAGCTACTAAACATAA+TGG + chr5_3:8651667-8651686 Msa0796610:CDS 40.0%
GTCAAGACTATAGTGTCATC+CGG - chr5_3:8651701-8651720 None:intergenic 40.0%
! ACAACTCTACCTCTAGAAAC+AGG - chr5_3:8651764-8651783 None:intergenic 40.0%
CATCCAATGACTCCAAATCT+TGG + chr5_3:8651803-8651822 Msa0796610:CDS 40.0%
AGGTTTGCCAGTATGGTTAT+TGG - chr5_3:8651962-8651981 None:intergenic 40.0%
TTCCTAACATAACACACCAG+CGG - chr5_3:8652013-8652032 None:intergenic 40.0%
CGAGGAAAAATAGTTAAGGG+TGG + chr5_3:8652053-8652072 Msa0796610:intron 40.0%
TTGTCATACCTAAGCTAGCA+AGG + chr5_3:8652831-8652850 Msa0796610:intron 40.0%
AAATTAGTGTGCTCCACCAA+TGG - chr5_3:8652863-8652882 None:intergenic 40.0%
TTTGGCTATGCACATCTTCA+TGG + chr5_3:8653127-8653146 Msa0796610:intron 40.0%
TATGATGCATGAAGGTTTGG+CGG + chr5_3:8653436-8653455 Msa0796610:intron 40.0%
ATATCGGTATTGCTTGAGCT+TGG - chr5_3:8653575-8653594 None:intergenic 40.0%
GTTAGCATGTGATACCAAAC+AGG + chr5_3:8653804-8653823 Msa0796610:intron 40.0%
! CTTACTGACTATGAAACGCA+TGG + chr5_3:8653895-8653914 Msa0796610:intron 40.0%
ATCAATAAGGCCTTAGTGGT+TGG - chr5_3:8653929-8653948 None:intergenic 40.0%
GGATATCAATAAGGCCTTAG+TGG - chr5_3:8653933-8653952 None:intergenic 40.0%
! AATGGGCTCGGATATCAATA+AGG - chr5_3:8653942-8653961 None:intergenic 40.0%
ACATTGGGCATGTGTGAAAT+GGG - chr5_3:8653959-8653978 None:intergenic 40.0%
AACATTGGGCATGTGTGAAA+TGG - chr5_3:8653960-8653979 None:intergenic 40.0%
!!! GTTTTGAGGTGGTTGAACAT+TGG - chr5_3:8653975-8653994 None:intergenic 40.0%
GGAGCTTCAAATTTCCTTTC+TGG + chr5_3:8654006-8654025 Msa0796610:intron 40.0%
CATGCAAAGATATATCCGTG+TGG - chr5_3:8654098-8654117 None:intergenic 40.0%
! TCCACTACCACTAGTTTATG+TGG + chr5_3:8654164-8654183 Msa0796610:intron 40.0%
TGTGTTGTGTGTTCAGCTTT+GGG - chr5_3:8654190-8654209 None:intergenic 40.0%
TGATTGTAGCTACTAGCTAC+AGG - chr5_3:8654240-8654259 None:intergenic 40.0%
CCAATTCTGGTATGACAAGT+TGG - chr5_3:8654325-8654344 None:intergenic 40.0%
CCAACTTGTCATACCAGAAT+TGG + chr5_3:8654322-8654341 Msa0796610:intron 40.0%
CTAGAGTTGAAACCTGTGAA+GGG - chr5_3:8649545-8649564 None:intergenic 40.0%
TTGTGTTGAATTCTCAGGCT+TGG + chr5_3:8654520-8654539 Msa0796610:intron 40.0%
!! TCACTCACCCTTTTCAAGAA+TGG + chr5_3:8654595-8654614 Msa0796610:CDS 40.0%
!! CACTCACCCTTTTCAAGAAT+GGG + chr5_3:8654596-8654615 Msa0796610:CDS 40.0%
ACTCCACCCATTCTTGAAAA+GGG - chr5_3:8654605-8654624 None:intergenic 40.0%
TATATTAGCTGAGCTTGAGC+TGG + chr5_3:8654738-8654757 Msa0796610:intron 40.0%
TCAGTGTCATGTACTTGTGT+TGG - chr5_3:8654925-8654944 None:intergenic 40.0%
AGGTCCATCCTACCAAAAAA+AGG + chr5_3:8654987-8655006 Msa0796610:intron 40.0%
!!! TGGACCTTTTTTTGGTAGGA+TGG - chr5_3:8654994-8655013 None:intergenic 40.0%
!!! TGGATGGACCTTTTTTTGGT+AGG - chr5_3:8654998-8655017 None:intergenic 40.0%
AAAATGATGCATGGACATCG+GGG - chr5_3:8655174-8655193 None:intergenic 40.0%
!!! GAGGGTACTTTTGGAAACTT+TGG + chr5_3:8655314-8655333 Msa0796610:CDS 40.0%
GATTGAACCAAGTCCAAATG+GGG + chr5_3:8650938-8650957 Msa0796610:CDS 40.0%
TCCAAATGGGGATACCTTAT+TGG + chr5_3:8655398-8655417 Msa0796610:CDS 40.0%
! TCCAATAAGGTATCCCCATT+TGG - chr5_3:8655402-8655421 None:intergenic 40.0%
CCCATCCAAGAATTCCAATA+AGG - chr5_3:8655415-8655434 None:intergenic 40.0%
TGGGTCTAAACTAGTTGCAA+AGG + chr5_3:8655431-8655450 Msa0796610:CDS 40.0%
AATCCCATCCACTTAGCTAT+CGG - chr5_3:8651325-8651344 None:intergenic 40.0%
GCACAATGACCAACAAACTT+TGG - chr5_3:8655797-8655816 None:intergenic 40.0%
!!! ATGGACAACCTTTTGAAGCA+CGG + chr5_3:8655843-8655862 Msa0796610:CDS 40.0%
TAATTCACCCGTGCTTCAAA+AGG - chr5_3:8655854-8655873 None:intergenic 40.0%
TAGACTTTGGTTGGAGAAAC+AGG - chr5_3:8655911-8655930 None:intergenic 40.0%
TTTCTCCAACCAAAGTCTAC+TGG + chr5_3:8655912-8655931 Msa0796610:CDS 40.0%
GCAGATAAACCAGTAGACTT+TGG - chr5_3:8655924-8655943 None:intergenic 40.0%
TCCTAAAATAACCGAGCCAT+CGG + chr5_3:8656043-8656062 Msa0796610:CDS 40.0%
CTAAGGATCTAGTGGAAAAC+TGG + chr5_3:8656081-8656100 Msa0796610:CDS 40.0%
GTCCTGATTATAGTGTCATC+CGG - chr5_3:8656140-8656159 None:intergenic 40.0%
TATAATCAGGACTCCGTTGA+TGG + chr5_3:8656148-8656167 Msa0796610:CDS 40.0%
! GAAACAGGTGGACTTATTGA+TGG - chr5_3:8656188-8656207 None:intergenic 40.0%
ACCCAATGACTCCAAATCTT+GGG + chr5_3:8656243-8656262 Msa0796610:CDS 40.0%
ATGGTTAGTGGAAATATGCG+CGG - chr5_3:8656389-8656408 None:intergenic 40.0%
ATACCTAAGCTAGTAAGGCT+TGG + chr5_3:8656482-8656501 Msa0796610:CDS 40.0%
AAATTAGTGTGCTCCAGCAA+TGG - chr5_3:8656509-8656528 None:intergenic 40.0%
AAGGCTGACAACACAATGAA+AGG + chr5_3:8656559-8656578 Msa0796610:three_prime_UTR 40.0%
ATTCAGGTATACATAGGGTG+GGG - chr5_3:8656645-8656664 None:intergenic 40.0%
CTATCTATAACGTCGAGTGG+TGG - chr5_3:8649309-8649328 None:intergenic 45.0%
GTACGACAAGGCAATGATGT+AGG - chr5_3:8649406-8649425 None:intergenic 45.0%
TTGCCTTGTCGTACCAGAAT+TGG + chr5_3:8649412-8649431 Msa0796610:CDS 45.0%
GATCCAATTCTGGTACGACA+AGG - chr5_3:8649418-8649437 None:intergenic 45.0%
GAACATGTTGTAATCGTGGG+TGG + chr5_3:8649490-8649509 Msa0796610:CDS 45.0%
CTCTCAACTATTAGCGGTGT+CGG - chr5_3:8649624-8649643 None:intergenic 45.0%
TCCTCATATTAGCCGTGATC+CGG - chr5_3:8649754-8649773 None:intergenic 45.0%
!! GAATTTCCAGGCTTGGTGTT+CGG + chr5_3:8649823-8649842 Msa0796610:intron 45.0%
CAGTCAGAGTCACTTAGAAC+TGG + chr5_3:8649861-8649880 Msa0796610:CDS 45.0%
TCAGAGTCACTTAGAACTGG+TGG + chr5_3:8649864-8649883 Msa0796610:CDS 45.0%
TCACCCTTTCCAAAAATGGG+TGG + chr5_3:8649895-8649914 Msa0796610:CDS 45.0%
!! CCTCCACCCATTTTTGGAAA+GGG - chr5_3:8649901-8649920 None:intergenic 45.0%
CCTTTCCAAAAATGGGTGGA+GGG + chr5_3:8649899-8649918 Msa0796610:CDS 45.0%
!! TGGAGGGCACTTGATTCAAT+TGG + chr5_3:8649915-8649934 Msa0796610:CDS 45.0%
TATATCAGCTGAGCTTGAGC+TGG + chr5_3:8650033-8650052 Msa0796610:intron 45.0%
!! GAGTTTTATGGTGCACTGAC+CGG - chr5_3:8650250-8650269 None:intergenic 45.0%
GAAACTGAGACTAAGTCGTC+GGG + chr5_3:8650281-8650300 Msa0796610:intron 45.0%
ACTCACACTCTTCAACTACC+CGG + chr5_3:8650465-8650484 Msa0796610:intron 45.0%
!!! GTCTTTTGTAAAAGGTGCCC+GGG - chr5_3:8650486-8650505 None:intergenic 45.0%
TGGACAAGACCTCGAAAATG+TGG + chr5_3:8650533-8650552 Msa0796610:intron 45.0%
GAAACATTAGCACGCCACAT+AGG + chr5_3:8650565-8650584 Msa0796610:intron 45.0%
GCATACATTCGACTCCTATG+TGG - chr5_3:8650582-8650601 None:intergenic 45.0%
GAGTCGAATGTATGCCATGT+TGG + chr5_3:8650587-8650606 Msa0796610:intron 45.0%
TCGAATGTATGCCATGTTGG+AGG + chr5_3:8650590-8650609 Msa0796610:intron 45.0%
GGTATGTTAGACCTCCAACA+TGG - chr5_3:8650604-8650623 None:intergenic 45.0%
AGCCCCTAGTTAAGGCTAAA+GGG - chr5_3:8650625-8650644 None:intergenic 45.0%
TAGCCCCTAGTTAAGGCTAA+AGG - chr5_3:8650626-8650645 None:intergenic 45.0%
ATTGCTTGAGAATCAAGGCC+AGG + chr5_3:8650673-8650692 Msa0796610:intron 45.0%
TTGCTTGAGAATCAAGGCCA+GGG + chr5_3:8650674-8650693 Msa0796610:intron 45.0%
! AAGGCGTCTTCATAGGTTGA+GGG - chr5_3:8650717-8650736 None:intergenic 45.0%
!! AAAGGCGTCTTCATAGGTTG+AGG - chr5_3:8650718-8650737 None:intergenic 45.0%
!!! GAGGGTACTTTTGGAAACCT+TGG + chr5_3:8650866-8650885 Msa0796610:CDS 45.0%
! AAGGTATCCCCATTTGGACT+TGG - chr5_3:8650948-8650967 None:intergenic 45.0%
TCCAAATGGGGATACCTTCT+TGG + chr5_3:8650950-8650969 Msa0796610:CDS 45.0%
!! TCCAAGAAGGTATCCCCATT+TGG - chr5_3:8650954-8650973 None:intergenic 45.0%
CCCATCCAAGAATTCCAAGA+AGG - chr5_3:8650967-8650986 None:intergenic 45.0%
GGCCAATAATCATGAAGCTC+TGG + chr5_3:8651229-8651248 Msa0796610:intron 45.0%
CAGATTGTAATAGGGTGCGA+CGG + chr5_3:8651289-8651308 Msa0796610:intron 45.0%
GTTGGTTATTGTGCTTTCCG+TGG + chr5_3:8651361-8651380 Msa0796610:CDS 45.0%
AGGTTGTCCATCTGAATAGG+AGG - chr5_3:8651392-8651411 None:intergenic 45.0%
! TGGACAACCTTTTCAACCAC+AGG + chr5_3:8651402-8651421 Msa0796610:CDS 45.0%
TATGGAAAAGGGTTACGTGC+AGG + chr5_3:8651436-8651455 Msa0796610:CDS 45.0%
GGTGCTAAAGAAGCAAGCTA+AGG + chr5_3:8651625-8651644 Msa0796610:CDS 45.0%
! TCTAGTAGAAAACTGGCCTC+CGG + chr5_3:8651649-8651668 Msa0796610:CDS 45.0%
! TGACTCCATTGATGGATCGA+TGG + chr5_3:8651717-8651736 Msa0796610:CDS 45.0%
CAAAGCCATCGATCCATCAA+TGG - chr5_3:8651725-8651744 None:intergenic 45.0%
! CATTGATGGATCGATGGCTT+TGG + chr5_3:8651723-8651742 Msa0796610:CDS 45.0%
! ACTCTACCTCTAGAAACAGG+TGG - chr5_3:8651761-8651780 None:intergenic 45.0%
AGAGGTAGAGTTGTACTCGT+TGG + chr5_3:8651770-8651789 Msa0796610:CDS 45.0%
! TGCCCAAGATTTGGAGTCAT+TGG - chr5_3:8651809-8651828 None:intergenic 45.0%
ATGACTCCAAATCTTGGGCA+AGG + chr5_3:8651809-8651828 Msa0796610:CDS 45.0%
AACCATACTGGCAAACCTTG+TGG + chr5_3:8651964-8651983 Msa0796610:CDS 45.0%
ACCATACTGGCAAACCTTGT+GGG + chr5_3:8651965-8651984 Msa0796610:CDS 45.0%
TCCTAACATAACACACCAGC+GGG - chr5_3:8652012-8652031 None:intergenic 45.0%
! CTAAGTGCCTAGCTCTTCAA+GGG + chr5_3:8652711-8652730 Msa0796610:intron 45.0%
! TAAGTGCCTAGCTCTTCAAG+GGG + chr5_3:8652712-8652731 Msa0796610:intron 45.0%
ATACCTAAGCTAGCAAGGCT+TGG + chr5_3:8652836-8652855 Msa0796610:intron 45.0%
TTGGTCGGTATGATGCATGA+AGG + chr5_3:8653428-8653447 Msa0796610:intron 45.0%
CGGTATGATGCATGAAGGTT+TGG + chr5_3:8653433-8653452 Msa0796610:intron 45.0%
TCATAGTCAGTAAGCAGGAG+TGG - chr5_3:8653889-8653908 None:intergenic 45.0%
GCGTTTCATAGTCAGTAAGC+AGG - chr5_3:8653894-8653913 None:intergenic 45.0%
GCCACATAAACTAGTGGTAG+TGG - chr5_3:8654168-8654187 None:intergenic 45.0%
CTTTGGGCCACATAAACTAG+TGG - chr5_3:8654174-8654193 None:intergenic 45.0%
GTGTGTTGTGTGTTCAGCTT+TGG - chr5_3:8654191-8654210 None:intergenic 45.0%
CTACAGGTATTACCGTTGAG+TGG - chr5_3:8654224-8654243 None:intergenic 45.0%
AAACGAGGTTGTTGTAGCCA+TGG - chr5_3:8654286-8654305 None:intergenic 45.0%
! ACTTCTGAGAGCTCCAATTC+TGG - chr5_3:8654338-8654357 None:intergenic 45.0%
GGCTCAATCTTCAGTCCAAA+AGG + chr5_3:8654372-8654391 Msa0796610:CDS 45.0%
GAACATGTTGTAATCGTGGG+TGG + chr5_3:8649490-8649509 Msa0796610:CDS 45.0%
GCTAGAGTTGAAACCTGTGA+AGG - chr5_3:8654450-8654469 None:intergenic 45.0%
CCTGAGAATTCAACACAAGC+AGG - chr5_3:8654518-8654537 None:intergenic 45.0%
CCTGCTTGTGTTGAATTCTC+AGG + chr5_3:8654515-8654534 Msa0796610:intron 45.0%
!! GAATTCTCAGGCTTGGTGTT+CGG + chr5_3:8654527-8654546 Msa0796610:intron 45.0%
!! TCACCCTTTTCAAGAATGGG+TGG + chr5_3:8654599-8654618 Msa0796610:CDS 45.0%
CACTCCACCCATTCTTGAAA+AGG - chr5_3:8654606-8654625 None:intergenic 45.0%
ATATCAGCTGTACAGGATGG+TGG + chr5_3:8654767-8654786 Msa0796610:intron 45.0%
!! AGTTTTGCCACTGGCCTATT+TGG - chr5_3:8655104-8655123 None:intergenic 45.0%
! AAGGTATCCCCATTTGGACT+TGG - chr5_3:8650948-8650967 None:intergenic 45.0%
CAGGGTCATAACCAATCATG+TGG - chr5_3:8655614-8655633 None:intergenic 45.0%
GAGATTGTAATAGGGTGCGA+TGG + chr5_3:8655731-8655750 Msa0796610:CDS 45.0%
TTCGATCACCGATAGCTAAG+TGG + chr5_3:8655756-8655775 Msa0796610:CDS 45.0%
ATCACCGATAGCTAAGTGGA+TGG + chr5_3:8655760-8655779 Msa0796610:CDS 45.0%
TCACCGATAGCTAAGTGGAT+GGG + chr5_3:8655761-8655780 Msa0796610:CDS 45.0%
AGGTTGTCCATCTGAATAGG+AGG - chr5_3:8651392-8651411 None:intergenic 45.0%
!!! TGGACAACCTTTTGAAGCAC+GGG + chr5_3:8655844-8655863 Msa0796610:CDS 45.0%
GCACGGGTGAATTACATCTA+CGG + chr5_3:8655860-8655879 Msa0796610:CDS 45.0%
TGCTTCAACAGTTCATCTCC+AGG + chr5_3:8655941-8655960 Msa0796610:CDS 45.0%
!!! ACCGATGGCTCGGTTATTTT+AGG - chr5_3:8656047-8656066 None:intergenic 45.0%
GGTGCTAAAGAAGCAAGCTA+AGG + chr5_3:8651625-8651644 Msa0796610:CDS 45.0%
GAAGCAAGCTAAGGATCTAG+TGG + chr5_3:8651634-8651653 Msa0796610:CDS 45.0%
CACCGGATGACACTATAATC+AGG + chr5_3:8656135-8656154 Msa0796610:CDS 45.0%
CAAAGCCATCGATCCATCAA+CGG - chr5_3:8651725-8651744 None:intergenic 45.0%
!! ATAAGTCCACCTGTTTCTGC+AGG + chr5_3:8656191-8656210 Msa0796610:CDS 45.0%
ACAACTCTACCTGCAGAAAC+AGG - chr5_3:8656203-8656222 None:intergenic 45.0%
CACCCAATGACTCCAAATCT+TGG + chr5_3:8656242-8656261 Msa0796610:CDS 45.0%
! GCCCAAGATTTGGAGTCATT+GGG - chr5_3:8651808-8651827 None:intergenic 45.0%
! TGCCCAAGATTTGGAGTCAT+TGG - chr5_3:8651809-8651828 None:intergenic 45.0%
ATGACTCCAAATCTTGGGCA+AGG + chr5_3:8651809-8651828 Msa0796610:CDS 45.0%
ATGTTTGCCCGTATGGTTAG+TGG - chr5_3:8656401-8656420 None:intergenic 45.0%
AACCATACGGGCAAACATTG+TGG + chr5_3:8656403-8656422 Msa0796610:CDS 45.0%
ACCATACGGGCAAACATTGT+GGG + chr5_3:8656404-8656423 Msa0796610:CDS 45.0%
TTCCTAACAGAACACACCAG+CGG - chr5_3:8656452-8656471 None:intergenic 45.0%
CATGTTGTAATCGTGGGTGG+TGG + chr5_3:8649493-8649512 Msa0796610:CDS 50.0%
GAAGGGATAGAGCAGTTGCA+AGG - chr5_3:8649528-8649547 None:intergenic 50.0%
CAACTGCTCTATCCCTTCAC+AGG + chr5_3:8649530-8649549 Msa0796610:CDS 50.0%
GTGTGTGTGTGTGTGTGTGT+TGG + chr5_3:8649693-8649712 Msa0796610:intron 50.0%
! GTGTGTGTGTGTGTTGGTGT+TGG + chr5_3:8649709-8649728 Msa0796610:intron 50.0%
TATTAGCCGTGATCCGGTGT+CGG - chr5_3:8649748-8649767 None:intergenic 50.0%
ACCGGATCACGGCTAATATG+AGG + chr5_3:8649750-8649769 Msa0796610:intron 50.0%
CCCTTTCCAAAAATGGGTGG+AGG + chr5_3:8649898-8649917 Msa0796610:CDS 50.0%
!! CCCTCCACCCATTTTTGGAA+AGG - chr5_3:8649902-8649921 None:intergenic 50.0%
! AAGTGCCCTCCACCCATTTT+TGG - chr5_3:8649907-8649926 None:intergenic 50.0%
CTCACACTCTTCAACTACCC+GGG + chr5_3:8650466-8650485 Msa0796610:intron 50.0%
! GAGCTCAAGCCACATTTTCG+AGG - chr5_3:8650545-8650564 None:intergenic 50.0%
GGAACAGTAGCCCCTAGTTA+AGG - chr5_3:8650633-8650652 None:intergenic 50.0%
!!! AGTGGAGAGGAGGGTACTTT+TGG + chr5_3:8650857-8650876 Msa0796610:CDS 50.0%
CTTGGATGGACAACTACCTC+CGG + chr5_3:8650884-8650903 Msa0796610:CDS 50.0%
TTCGATCGCCGATAGCTAAG+TGG + chr5_3:8651314-8651333 Msa0796610:CDS 50.0%
ATCGCCGATAGCTAAGTGGA+TGG + chr5_3:8651318-8651337 Msa0796610:CDS 50.0%
TCGCCGATAGCTAAGTGGAT+GGG + chr5_3:8651319-8651338 Msa0796610:CDS 50.0%
CTGAATAGGAGGCAAGTCCA+CGG - chr5_3:8651381-8651400 None:intergenic 50.0%
GGACTTGCCTCCTATTCAGA+TGG + chr5_3:8651382-8651401 Msa0796610:CDS 50.0%
TCCTCAAACAACCGAGCCAT+CGG + chr5_3:8651604-8651623 Msa0796610:CDS 50.0%
!! CTTCTTTAGCACCGATGGCT+CGG - chr5_3:8651618-8651637 None:intergenic 50.0%
! GCTTGCTTCTTTAGCACCGA+TGG - chr5_3:8651623-8651642 None:intergenic 50.0%
TTGTACTCGTTGGAGACGCT+TGG + chr5_3:8651780-8651799 Msa0796610:CDS 50.0%
CAAGCTCCTTGCCCAAGATT+TGG - chr5_3:8651818-8651837 None:intergenic 50.0%
!! AGGAGCTTGTTGTGCTCTTG+AGG + chr5_3:8651829-8651848 Msa0796610:CDS 50.0%
TTGTGCTCTTGAGGATGCAG+TGG + chr5_3:8651838-8651857 Msa0796610:CDS 50.0%
ACCCACAAGGTTTGCCAGTA+TGG - chr5_3:8651969-8651988 None:intergenic 50.0%
ACTGCGAAATCGAACCCACA+AGG - chr5_3:8651982-8652001 None:intergenic 50.0%
TTGTGGGTTCGATTTCGCAG+TGG + chr5_3:8651981-8652000 Msa0796610:intron 50.0%
TGTGGGTTCGATTTCGCAGT+GGG + chr5_3:8651982-8652001 Msa0796610:intron 50.0%
ACCCGCTGGTGTGTTATGTT+AGG + chr5_3:8652008-8652027 Msa0796610:intron 50.0%
ATATTGTCAGGGACAGAGCG+AGG + chr5_3:8652035-8652054 Msa0796610:intron 50.0%
CCTTGAAGAGCTAGGCACTT+AGG - chr5_3:8652713-8652732 None:intergenic 50.0%
! CCTAAGTGCCTAGCTCTTCA+AGG + chr5_3:8652710-8652729 Msa0796610:intron 50.0%
GCTAGAGCTTGTGATAGACG+TGG + chr5_3:8653499-8653518 Msa0796610:intron 50.0%
! GGCCTTTTCACCAACCACTA+AGG + chr5_3:8653916-8653935 Msa0796610:intron 50.0%
!! GGCCTTAGTGGTTGGTGAAA+AGG - chr5_3:8653921-8653940 None:intergenic 50.0%
! ACTCAAGTGTCGCTCCAGAA+AGG - chr5_3:8654023-8654042 None:intergenic 50.0%
ACAATCTCGCCACCACTCAA+CGG + chr5_3:8654209-8654228 Msa0796610:intron 50.0%
CAGGTATTACCGTTGAGTGG+TGG - chr5_3:8654221-8654240 None:intergenic 50.0%
CATGTTGTAATCGTGGGTGG+TGG + chr5_3:8649493-8649512 Msa0796610:CDS 50.0%
GAAGGGATAGAGCAGTTGCA+AGG - chr5_3:8649528-8649547 None:intergenic 50.0%
CAACTGCTCTATCCCTTCAC+AGG + chr5_3:8649530-8649549 Msa0796610:CDS 50.0%
CAGTCAGAGTCACTTCGAAC+AGG + chr5_3:8654565-8654584 Msa0796610:CDS 50.0%
TCAGAGTCACTTCGAACAGG+TGG + chr5_3:8654568-8654587 Msa0796610:CDS 50.0%
! ATGGTGGTGAAGTCTGAGGA+TGG + chr5_3:8654783-8654802 Msa0796610:intron 50.0%
CTTCCTACCAAATAGGCCAG+TGG + chr5_3:8655094-8655113 Msa0796610:intron 50.0%
! TTGCCACTGGCCTATTTGGT+AGG - chr5_3:8655100-8655119 None:intergenic 50.0%
ACGGATATTGTGCAGCCAAG+AGG + chr5_3:8655275-8655294 Msa0796610:intron 50.0%
!!! AGTGGAGAGGAGGGTACTTT+TGG + chr5_3:8650857-8650876 Msa0796610:CDS 50.0%
GTTGGTCATTGTGCTTTCCG+TGG + chr5_3:8655803-8655822 Msa0796610:CDS 50.0%
CTGAATAGGAGGCAAGTCCA+CGG - chr5_3:8651381-8651400 None:intergenic 50.0%
GGACTTGCCTCCTATTCAGA+TGG + chr5_3:8651382-8651401 Msa0796610:CDS 50.0%
!! CTTCTTTAGCACCGATGGCT+CGG - chr5_3:8651618-8651637 None:intergenic 50.0%
! GCTTGCTTCTTTAGCACCGA+TGG - chr5_3:8651623-8651642 None:intergenic 50.0%
! CGTTGATGGATCGATGGCTT+TGG + chr5_3:8656162-8656181 Msa0796610:CDS 50.0%
ACTCTACCTGCAGAAACAGG+TGG - chr5_3:8656200-8656219 None:intergenic 50.0%
GCAGGTAGAGTTGTACTCGT+TGG + chr5_3:8656209-8656228 Msa0796610:CDS 50.0%
! ATTTGGAGTCATTGGGTGCC+AGG - chr5_3:8656240-8656259 None:intergenic 50.0%
CATGCTCCTTGCCCAAGATT+TGG - chr5_3:8656257-8656276 None:intergenic 50.0%
! AGGAGCATGTTGTGCTCTTG+AGG + chr5_3:8656268-8656287 Msa0796610:CDS 50.0%
TTGTGCTCTTGAGGATGCAG+TGG + chr5_3:8651838-8651857 Msa0796610:CDS 50.0%
ACCCACAATGTTTGCCCGTA+TGG - chr5_3:8656408-8656427 None:intergenic 50.0%
ACGGGCAAACATTGTGGGTT+CGG + chr5_3:8656409-8656428 Msa0796610:CDS 50.0%
TTGTGGGTTCGGCTTTGCAA+TGG + chr5_3:8656420-8656439 Msa0796610:CDS 50.0%
TGTGGGTTCGGCTTTGCAAT+GGG + chr5_3:8656421-8656440 Msa0796610:CDS 50.0%
TCCTAACAGAACACACCAGC+GGG - chr5_3:8656451-8656470 None:intergenic 50.0%
! GGACCAAGCCTTACTAGCTT+AGG - chr5_3:8656488-8656507 None:intergenic 50.0%
! AGTAAGGCTTGGTCCATTGC+TGG + chr5_3:8656493-8656512 Msa0796610:CDS 50.0%
CAAAGACCGAACACCAAGCC+TGG - chr5_3:8649832-8649851 None:intergenic 55.0%
!! CAGGCTTGGTGTTCGGTCTT+TGG + chr5_3:8649830-8649849 Msa0796610:intron 55.0%
! TGGTGTTCGGTCTTTGGTGC+TGG + chr5_3:8649836-8649855 Msa0796610:CDS 55.0%
ACTGAGACTAAGTCGTCGGG+TGG + chr5_3:8650284-8650303 Msa0796610:intron 55.0%
TGGGCTATTGTGCAGCCAAG+AGG + chr5_3:8650827-8650846 Msa0796610:intron 55.0%
CGGAGGTAGTTGTCCATCCA+AGG - chr5_3:8650886-8650905 None:intergenic 55.0%
!! ACCGATGGCTCGGTTGTTTG+AGG - chr5_3:8651608-8651627 None:intergenic 55.0%
TATCCGCCCCTTGAAGAGCT+AGG - chr5_3:8652721-8652740 None:intergenic 55.0%
! GGACCAAGCCTTGCTAGCTT+AGG - chr5_3:8652842-8652861 None:intergenic 55.0%
! GCTAGCAAGGCTTGGTCCAT+TGG + chr5_3:8652844-8652863 Msa0796610:intron 55.0%
! AGCAAGGCTTGGTCCATTGG+TGG + chr5_3:8652847-8652866 Msa0796610:intron 55.0%
! GGGCATGTGTGAAATGGGCT+CGG - chr5_3:8653954-8653973 None:intergenic 55.0%
TGGTGTTCGGTCTCTTGTGC+TGG + chr5_3:8654540-8654559 Msa0796610:CDS 55.0%
! CAGGATGGTGGTGAAGTCTG+AGG + chr5_3:8654779-8654798 Msa0796610:intron 55.0%
! ATGGGTGCGAGTTTTGCCAC+TGG - chr5_3:8655113-8655132 None:intergenic 55.0%
ATGCATGGACATCGGGGAGT+GGG - chr5_3:8655168-8655187 None:intergenic 55.0%
TACGGAAAAGGGTTACGCGC+AGG + chr5_3:8655878-8655897 Msa0796610:CDS 55.0%
! GGACTCCGTTGATGGATCGA+TGG + chr5_3:8656156-8656175 Msa0796610:CDS 55.0%
TTGTACTCGTTGGAGACGCC+TGG + chr5_3:8656219-8656238 Msa0796610:CDS 55.0%
TTTGCAATGGGACAACCCGC+TGG + chr5_3:8656433-8656452 Msa0796610:CDS 55.0%
ACCCGCTGGTGTGTTCTGTT+AGG + chr5_3:8656447-8656466 Msa0796610:CDS 55.0%
! ATCGTGGGTGGTGGCATAGC+AGG + chr5_3:8649502-8649521 Msa0796610:CDS 60.0%
CCACGATACGTGTCCGACAC+CGG + chr5_3:8649732-8649751 Msa0796610:intron 60.0%
ACGTGTCCGACACCGGATCA+CGG + chr5_3:8649739-8649758 Msa0796610:intron 60.0%
TCTCCACTGCACGCACCTCT+TGG - chr5_3:8650845-8650864 None:intergenic 60.0%
! AAGAGGTGCGTGCAGTGGAG+AGG + chr5_3:8650844-8650863 Msa0796610:CDS 60.0%
! GTGCCTAGCTCTTCAAGGGG+CGG + chr5_3:8652715-8652734 Msa0796610:intron 60.0%
AGGGGAACTCGCCATCCCAA+AGG - chr5_3:8652779-8652798 None:intergenic 60.0%
! ATCGTGGGTGGTGGCATTGC+AGG + chr5_3:8654406-8654425 Msa0796610:CDS 60.0%
GATGCATGGACATCGGGGAG+TGG - chr5_3:8655169-8655188 None:intergenic 60.0%
TCTCCACTGCACGCACCTCT+TGG - chr5_3:8650845-8650864 None:intergenic 60.0%
! AAGAGGTGCGTGCAGTGGAG+AGG + chr5_3:8650844-8650863 Msa0796610:CDS 60.0%
! CCGGTGTCGGACACGTATCG+TGG - chr5_3:8649735-8649754 None:intergenic 65.0%
! CAGCCAAGAGGTGCGTGCAG+TGG + chr5_3:8650839-8650858 Msa0796610:intron 65.0%
AGGTGCGTGCAGTGGAGAGG+AGG + chr5_3:8650847-8650866 Msa0796610:CDS 65.0%
GGTGCGTGCAGTGGAGAGGA+GGG + chr5_3:8650848-8650867 Msa0796610:CDS 65.0%
TTCGCAGTGGGACAACCCGC+TGG + chr5_3:8651994-8652013 Msa0796610:intron 65.0%
! CAGCCAAGAGGTGCGTGCAG+TGG + chr5_3:8650839-8650858 Msa0796610:intron 65.0%
AGGTGCGTGCAGTGGAGAGG+AGG + chr5_3:8650847-8650866 Msa0796610:CDS 65.0%
GGTGCGTGCAGTGGAGAGGA+GGG + chr5_3:8650848-8650867 Msa0796610:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 8649283 8656828 8649283 ID=Msa0796610;Name=Msa0796610
chr5_3 mRNA 8649283 8656828 8649283 ID=Msa0796610-mRNA-1;Parent=Msa0796610;Name=Msa0796610-mRNA-1;_AED=0.17;_eAED=0.17;_QI=78|0.4|0.54|1|1|1|11|275|813
chr5_3 exon 8649283 8649551 8649283 ID=Msa0796610-mRNA-1:exon:3631;Parent=Msa0796610-mRNA-1
chr5_3 exon 8649833 8649979 8649833 ID=Msa0796610-mRNA-1:exon:3632;Parent=Msa0796610-mRNA-1
chr5_3 exon 8650077 8650142 8650077 ID=Msa0796610-mRNA-1:exon:3633;Parent=Msa0796610-mRNA-1
chr5_3 exon 8650842 8651004 8650842 ID=Msa0796610-mRNA-1:exon:3634;Parent=Msa0796610-mRNA-1
chr5_3 exon 8651292 8651520 8651292 ID=Msa0796610-mRNA-1:exon:3635;Parent=Msa0796610-mRNA-1
chr5_3 exon 8651603 8651999 8651603 ID=Msa0796610-mRNA-1:exon:3636;Parent=Msa0796610-mRNA-1
chr5_3 exon 8654339 8654455 8654339 ID=Msa0796610-mRNA-1:exon:3637;Parent=Msa0796610-mRNA-1
chr5_3 exon 8654537 8654683 8654537 ID=Msa0796610-mRNA-1:exon:3638;Parent=Msa0796610-mRNA-1
chr5_3 exon 8655290 8655452 8655290 ID=Msa0796610-mRNA-1:exon:3639;Parent=Msa0796610-mRNA-1
chr5_3 exon 8655653 8655962 8655653 ID=Msa0796610-mRNA-1:exon:3640;Parent=Msa0796610-mRNA-1
chr5_3 exon 8656042 8656828 8656042 ID=Msa0796610-mRNA-1:exon:3641;Parent=Msa0796610-mRNA-1
chr5_3 five_prime_UTR 8649283 8649360 8649283 ID=Msa0796610-mRNA-1:five_prime_utr;Parent=Msa0796610-mRNA-1
chr5_3 CDS 8649361 8649551 8649361 ID=Msa0796610-mRNA-1:cds;Parent=Msa0796610-mRNA-1
chr5_3 CDS 8649833 8649979 8649833 ID=Msa0796610-mRNA-1:cds;Parent=Msa0796610-mRNA-1
chr5_3 CDS 8650077 8650142 8650077 ID=Msa0796610-mRNA-1:cds;Parent=Msa0796610-mRNA-1
chr5_3 CDS 8650842 8651004 8650842 ID=Msa0796610-mRNA-1:cds;Parent=Msa0796610-mRNA-1
chr5_3 CDS 8651292 8651520 8651292 ID=Msa0796610-mRNA-1:cds;Parent=Msa0796610-mRNA-1
chr5_3 CDS 8651603 8651999 8651603 ID=Msa0796610-mRNA-1:cds;Parent=Msa0796610-mRNA-1
chr5_3 CDS 8654339 8654455 8654339 ID=Msa0796610-mRNA-1:cds;Parent=Msa0796610-mRNA-1
chr5_3 CDS 8654537 8654683 8654537 ID=Msa0796610-mRNA-1:cds;Parent=Msa0796610-mRNA-1
chr5_3 CDS 8655290 8655452 8655290 ID=Msa0796610-mRNA-1:cds;Parent=Msa0796610-mRNA-1
chr5_3 CDS 8655653 8655962 8655653 ID=Msa0796610-mRNA-1:cds;Parent=Msa0796610-mRNA-1
chr5_3 CDS 8656042 8656553 8656042 ID=Msa0796610-mRNA-1:cds;Parent=Msa0796610-mRNA-1
chr5_3 three_prime_UTR 8656554 8656828 8656554 ID=Msa0796610-mRNA-1:three_prime_utr;Parent=Msa0796610-mRNA-1
Gene Sequence

>Msa0796610

ATGGCTACAACATTCTCGTCTTTTATGTTTCTTAAACGAATTCCTACATCATTGCCTTGTCGTACCAGAATTGGATCCCTACGATATTCCAAATTAACAATCAAGGCTCAATCTTCTGATGTCCGAAAGGAACATGTTGTAATCGTGGGTGGTGGCATAGCAGGCCTTGCAACTGCTCTATCCCTTCACAGGCTTGGTGTTCGGTCTTTGGTGCTGGAACAGTCAGAGTCACTTAGAACTGGTGGAACTTCACTCACCCTTTCCAAAAATGGGTGGAGGGCACTTGATTCAATTGGAGTAGCAAATTGTCTCAGAACTCAATATTTAGAAATTCAAGGGATTGTGTTGAAATCTGAGGATGGAAAAGAACTACGTGCTTTGAATTTCAAAGAAAAGGACGAAAGCCAAGAGGTGCGTGCAGTGGAGAGGAGGGTACTTTTGGAAACCTTGGATGGACAACTACCTCCGGATACCATTCAATATTCTTCACGGTTGGTCAAGATTGAACCAAGTCCAAATGGGGATACCTTCTTGGAATTCTTGGATGGGTCTAAAATACTTGCAAAGATTGTAATAGGGTGCGACGGCATTCGATCGCCGATAGCTAAGTGGATGGGATTTTCTGAGCCAAAGTACGTTGGTTATTGTGCTTTCCGTGGACTTGCCTCCTATTCAGATGGACAACCTTTTCAACCACAGGTGAATTACATCTATGGAAAAGGGTTACGTGCAGGATATGTTCCTGTTTCTCCAACCAAAGTGTATTGGTTTGTCATCTTCAATAGTTCATCTGCAGGTCCTCAAACAACCGAGCCATCGGTGCTAAAGAAGCAAGCTAAGGATCTAGTAGAAAACTGGCCTCCGGAGCTACTAAACATAATGGATTCTACGCCGGATGACACTATAGTCTTGACTCCATTGATGGATCGATGGCTTTGGCCATTGATAAATCCACCTGTTTCTAGAGGTAGAGTTGTACTCGTTGGAGACGCTTGGCATCCAATGACTCCAAATCTTGGGCAAGGAGCTTGTTGTGCTCTTGAGGATGCAGTGGTTCTTGCTGAAAAGCTTGCTGCAGCAATCAACTCTGATGATGCTTCTATCGAAGACGCTTTTAGATCATATGGCAATGAAAGATGGTCGCGCATATTTCCAATAACCATACTGGCAAACCTTGTGGGTTCGATTTCGCAAATTGGAGCTCTCAGAAGTTCCAAATTAATCAAGGCTCAATCTTCAGTCCAAAAGGAACATGTTGTAATCGTGGGTGGTGGCATTGCAGGCCTTGCAACTGCTCTATCCCTTCACAGGCTTGGTGTTCGGTCTCTTGTGCTGGAGCAGTCAGAGTCACTTCGAACAGGTGGAACTTCACTCACCCTTTTCAAGAATGGGTGGAGTGTACTTGATTCAATTGGAGTAGCTAATTATCTTAGAACTCAATATTTAGAAATTCAAGGCCAAGAGGTGCGTGCAGTGGAGAGGAGGGTACTTTTGGAAACTTTGGCTGCTCAGTTGCCTCCTGATAGCATTCAATATTCTTCACGGTTGGTCAAGATTGAACCAAGTCCAAATGGGGATACCTTATTGGAATTCTTGGATGGGTCTAAACTAGTTGCAAAGGATCTTACAGACATAGTAGCCAATTCTGAAGCTTTAGTCCTAAAAAGTGTTAACAAATTGATTCCATGTCTAAACATTGAGATTGTAATAGGGTGCGATGGAATTCGATCACCGATAGCTAAGTGGATGGGATTTTCTGAGCCAAAGTTTGTTGGTCATTGTGCTTTCCGTGGACTTGCCTCCTATTCAGATGGACAACCTTTTGAAGCACGGGTGAATTACATCTACGGAAAAGGGTTACGCGCAGGATACGTTCCTGTTTCTCCAACCAAAGTCTACTGGTTTATCTGCTTCAACAGTTCATCTCCAGGTCCTAAAATAACCGAGCCATCGGTGCTAAAGAAGCAAGCTAAGGATCTAGTGGAAAACTGGCCTCCAGAGCTACTAAACATAATGAATTCTACACCGGATGACACTATAATCAGGACTCCGTTGATGGATCGATGGCTTTGGCCATCAATAAGTCCACCTGTTTCTGCAGGTAGAGTTGTACTCGTTGGAGACGCCTGGCACCCAATGACTCCAAATCTTGGGCAAGGAGCATGTTGTGCTCTTGAGGATGCAGTGGTTCTTGCTAAAAAGCTTGCTGCAGCAATCGATTCTGATGATGCTTCTATCGAAGACGCTTTTAGAGAATATGGCAATGAAAGATGGCCGCGCATATTTCCACTAACCATACGGGCAAACATTGTGGGTTCGGCTTTGCAATGGGACAACCCGCTGGTGTGTTCTGTTAGGAACAATATTGTCATACCTAAGCTAGTAAGGCTTGGTCCATTGCTGGAGCACACTAATTTTACTAGTGAGAGTCTACAAAGATGA
Protein sequence

>Msa0796610

MATTFSSFMFLKRIPTSLPCRTRIGSLRYSKLTIKAQSSDVRKEHVVIVGGGIAGLATALSLHRLGVRSLVLEQSESLRTGGTSLTLSKNGWRALDSIGVANCLRTQYLEIQGIVLKSEDGKELRALNFKEKDESQEVRAVERRVLLETLDGQLPPDTIQYSSRLVKIEPSPNGDTFLEFLDGSKILAKIVIGCDGIRSPIAKWMGFSEPKYVGYCAFRGLASYSDGQPFQPQVNYIYGKGLRAGYVPVSPTKVYWFVIFNSSSAGPQTTEPSVLKKQAKDLVENWPPELLNIMDSTPDDTIVLTPLMDRWLWPLINPPVSRGRVVLVGDAWHPMTPNLGQGACCALEDAVVLAEKLAAAINSDDASIEDAFRSYGNERWSRIFPITILANLVGSISQIGALRSSKLIKAQSSVQKEHVVIVGGGIAGLATALSLHRLGVRSLVLEQSESLRTGGTSLTLFKNGWSVLDSIGVANYLRTQYLEIQGQEVRAVERRVLLETLAAQLPPDSIQYSSRLVKIEPSPNGDTLLEFLDGSKLVAKDLTDIVANSEALVLKSVNKLIPCLNIEIVIGCDGIRSPIAKWMGFSEPKFVGHCAFRGLASYSDGQPFEARVNYIYGKGLRAGYVPVSPTKVYWFICFNSSSPGPKITEPSVLKKQAKDLVENWPPELLNIMNSTPDDTIIRTPLMDRWLWPSISPPVSAGRVVLVGDAWHPMTPNLGQGACCALEDAVVLAKKLAAAIDSDDASIEDAFREYGNERWPRIFPLTIRANIVGSALQWDNPLVCSVRNNIVIPKLVRLGPLLEHTNFTSESLQR*