AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0422340

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0422340 MtrunA17_Chr3g0123261 88.650 1207 105 10 1 1194 1 1188 0.0 1848
Msa0422340 MtrunA17_Chr2g0297201 42.529 87 50 0 10 96 8 94 2.51e-18 88.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0422340 AT5G37190.2 35.570 149 92 2 12 159 15 160 2.39e-20 98.2
Msa0422340 AT5G37190.3 35.570 149 92 2 12 159 15 160 2.70e-20 97.8
Msa0422340 AT5G37190.1 35.570 149 92 2 12 159 15 160 3.73e-20 97.4
Msa0422340 AT4G00930.2 47.500 80 42 0 12 91 15 94 8.84e-19 93.2
Msa0422340 AT4G00930.3 47.500 80 42 0 12 91 15 94 9.36e-19 93.2
Msa0422340 AT4G00930.1 47.500 80 42 0 12 91 15 94 9.85e-19 93.2
Msa0422340 AT4G00930.4 47.500 80 42 0 12 91 15 94 1.02e-18 93.2
Msa0422340 AT4G00930.5 47.500 80 42 0 12 91 15 94 1.02e-18 92.8
Msa0422340 AT4G00580.1 44.444 90 48 2 5 92 1 90 1.96e-18 88.2
Msa0422340 AT1G30060.1 43.182 88 49 1 11 97 9 96 3.55e-18 84.0
Msa0422340 AT2G01800.2 44.828 87 47 1 12 97 10 96 4.20e-18 85.9
Msa0422340 AT2G01800.3 44.828 87 47 1 12 97 10 96 5.93e-18 86.3
Msa0422340 AT2G01800.1 44.828 87 47 1 12 97 10 96 7.24e-18 86.3
Msa0422340 AT4G00920.1 46.512 86 44 1 12 97 15 98 2.95e-17 84.7
Msa0422340 AT4G00580.2 42.169 83 47 1 11 92 1 83 7.47e-16 80.5
Msa0422340 AT2G02770.1 45.745 94 48 3 5 97 1 92 1.02e-15 79.7
Msa0422340 AT1G55865.1 34.091 88 58 0 12 99 9 96 2.08e-13 72.4

Find 249 sgRNAs with CRISPR-Local

Find 368 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCTGTATTTGTCCGATTT+TGG 0.076793 3_2:-71477042 None:intergenic
AATCAGACAGATTGTAAATT+AGG 0.129571 3_2:+71476762 Msa0422340:five_prime_UTR
GTCATCCTTAGTGCCTTTAT+TGG 0.184884 3_2:-71478426 None:intergenic
TATATATACTCAAGGGTTTA+TGG 0.195938 3_2:-71476719 None:intergenic
TCACATTGAGTATGTGAATT+TGG 0.200820 3_2:-71478737 None:intergenic
CAATTGAGAGGTTGTCATTC+TGG 0.202886 3_2:-71481902 None:intergenic
TCACATTCAATATGTGAATT+TGG 0.206092 3_2:-71478392 None:intergenic
AAAAGAAGCTATAAAGAATT+TGG 0.234461 3_2:+71478361 Msa0422340:CDS
TCAAGCTTTGCAGTTGAAAT+AGG 0.236952 3_2:-71480247 None:intergenic
AAATATCGCAACAATGCTTC+TGG 0.279385 3_2:+71480187 Msa0422340:CDS
TGGATCTGATAAAGGCATTA+AGG 0.283780 3_2:+71478766 Msa0422340:CDS
TTCTTAGGCTTCTTCTTTAG+AGG 0.290983 3_2:-71479085 None:intergenic
ATCAGACAGATTGTAAATTA+GGG 0.297305 3_2:+71476763 Msa0422340:five_prime_UTR
AATAATGCTTTAGTTGGTTC+TGG 0.300663 3_2:+71477348 Msa0422340:CDS
TGCAGATAAAGAAGTAATTA+AGG 0.308455 3_2:+71478964 Msa0422340:CDS
GCTTGAAGGTTCCAACAAAA+TGG 0.312808 3_2:+71480264 Msa0422340:CDS
AAAAGAAAATCAGCACTGTT+TGG 0.323408 3_2:-71482039 None:intergenic
CATTCTTTGTCCAGTTTGTC+AGG 0.328647 3_2:+71481823 Msa0422340:intron
TATTCTTCAACAATTGCAAC+TGG 0.332657 3_2:-71477407 None:intergenic
GGTTCTGGTGGCGATAATAA+TGG 0.333510 3_2:+71477363 Msa0422340:CDS
TGGACCTGGTGGAGGAAATA+AGG 0.335426 3_2:+71477845 Msa0422340:CDS
CATATTGAATGTGAAGTAGA+TGG 0.341253 3_2:+71478062 Msa0422340:CDS
AATATTGAATGTGAAGTAGA+TGG 0.344604 3_2:+71477825 Msa0422340:CDS
CAATGCTTCTGGGAAAAGTA+TGG 0.345200 3_2:+71480198 Msa0422340:CDS
AATACAGATTCATGGCATTA+AGG 0.348777 3_2:+71477055 Msa0422340:CDS
CGGACAATATTCCGCTTAAC+TGG 0.348908 3_2:-71478923 None:intergenic
CAAAACGAATCTTGACAAAA+TGG 0.349538 3_2:+71479367 Msa0422340:CDS
TTCTGGGAAAAGTATGGATT+TGG 0.352289 3_2:+71480204 Msa0422340:CDS
CTTTCATGCTTTCCCAAAAT+CGG 0.353022 3_2:+71477029 Msa0422340:CDS
AAGGACAGGGCATAAGATAA+AGG 0.358550 3_2:+71476684 None:intergenic
CTTCGTCAGGTGGAATCTAT+TGG 0.359366 3_2:+71477318 Msa0422340:CDS
GGAAGGGATGGTAATGTTGC+AGG 0.360140 3_2:+71479832 Msa0422340:CDS
ATCATCCTTATTTCTTTCAC+TGG 0.361468 3_2:-71478087 None:intergenic
CACCTGAAAATTGTTGAAAC+TGG 0.364926 3_2:-71478612 None:intergenic
TGGATCCAGTGAAAGAAATA+AGG 0.367960 3_2:+71478082 Msa0422340:CDS
TACCTGAAAATCATTGAAAC+TGG 0.372298 3_2:-71478267 None:intergenic
AAAGAAAATCAGCACTGTTT+GGG 0.376917 3_2:-71482038 None:intergenic
TTCTGTTAGGTTAAACGTAA+TGG 0.377573 3_2:+71477159 Msa0422340:intron
TCCTGTTTGTTCCTTGATTG+AGG 0.378018 3_2:-71478290 None:intergenic
TAAAGGAGGTGTCGCGAATA+TGG 0.379116 3_2:+71477488 Msa0422340:CDS
ATACTCAAGGGTTTATGGTT+TGG 0.380712 3_2:-71476714 None:intergenic
CGCGGACAATGCTGATTCCT+TGG 0.381471 3_2:+71479907 Msa0422340:CDS
GTAGAAGATTGTTTGTTGTT+TGG 0.383134 3_2:-71479998 None:intergenic
ATTTCAACTGCAAAGCTTGA+AGG 0.383535 3_2:+71480250 Msa0422340:CDS
GAACACATGGGCGATCAAAA+AGG 0.384695 3_2:-71478673 None:intergenic
GTTCTTTCTGTGACTGATAA+GGG 0.384798 3_2:+71479872 Msa0422340:CDS
GCAGAAGAAAAGCTTGTTAG+AGG 0.387282 3_2:+71480348 Msa0422340:CDS
GGAGAATGGTGTCAAATTAC+TGG 0.387636 3_2:+71477509 Msa0422340:CDS
GTTATCCTTCATCAGATCCT+TGG 0.388542 3_2:-71479504 None:intergenic
AATAAAGCAAGAAAAGCTTC+TGG 0.390306 3_2:+71480292 Msa0422340:CDS
TTCTTTCTTCTCTTTGCACT+TGG 0.393142 3_2:-71477909 None:intergenic
ATTGAAACTGGATGTCCTTT+CGG 0.393196 3_2:-71478255 None:intergenic
ACCTCATGGTTCACTTCGTC+AGG 0.399138 3_2:+71477305 Msa0422340:CDS
GTTCTGGTGGCGATAATAAT+GGG 0.403199 3_2:+71477364 Msa0422340:CDS
GAAGTAGATGGGCTTGATAA+AGG 0.404129 3_2:+71477630 Msa0422340:CDS
ATCAGCACTGTTTGGGATGA+AGG 0.405495 3_2:-71482031 None:intergenic
TGTTCTTTCTGTGACTGATA+AGG 0.406117 3_2:+71479871 Msa0422340:CDS
GAAACAAGTGGGCGGTCAAA+AGG 0.412157 3_2:-71478326 None:intergenic
CCTATGGAATGTGAAGTAGA+TGG 0.412757 3_2:+71477618 Msa0422340:CDS
ATTAACTTACCTTGCTTTGA+AGG 0.420745 3_2:-71481105 None:intergenic
AGAGAAAACGGAAGAGTAAG+AGG 0.422602 3_2:+71477712 Msa0422340:CDS
TTATCACTTATCTGATTCAA+TGG 0.425726 3_2:+71477188 Msa0422340:CDS
GAGGACATGGCGCTGTTAGA+TGG 0.426197 3_2:-71480148 None:intergenic
TGAAGAATAAGAAAGATAAG+AGG 0.426865 3_2:+71477421 Msa0422340:CDS
CATACTCAATGTGAGGTAGA+TGG 0.426882 3_2:+71478746 Msa0422340:CDS
CTTCTTCTTTGCACTTTGTA+CGG 0.427088 3_2:-71478825 None:intergenic
TTCTTATGATGGGAAAAGAT+TGG 0.428177 3_2:+71481064 Msa0422340:CDS
ATCTGCATTCTCTGCAAAGA+TGG 0.429838 3_2:-71478948 None:intergenic
TAAACAAGGTGATATTGAAA+TGG 0.432155 3_2:+71479454 Msa0422340:CDS
AGAAGAAGCATAAGAGTGTA+AGG 0.435465 3_2:+71478840 Msa0422340:CDS
TGTCGAGTCTTGTGTGCATT+TGG 0.436581 3_2:-71480106 None:intergenic
AATCTTGACAAAATGGAGAT+TGG 0.437924 3_2:+71479374 Msa0422340:CDS
GACTCTATTGTATGCGAGAA+AGG 0.441711 3_2:+71478791 Msa0422340:CDS
GCACTTGGCACTGATATTGA+AGG 0.443827 3_2:-71477894 None:intergenic
TTATCCTTCATCAGATCCTT+GGG 0.446924 3_2:-71479503 None:intergenic
ATCGGACAAATACAGATTCA+TGG 0.447220 3_2:+71477047 Msa0422340:CDS
TCCGGAAAATGCTGCAACAC+AGG 0.447565 3_2:+71479784 Msa0422340:CDS
CATATCTGATGTGCTCTTTG+AGG 0.447860 3_2:-71480020 None:intergenic
AGGACAGGGCATAAGATAAA+GGG 0.448059 3_2:+71476685 None:intergenic
CAGAATGACAACCTCTCAAT+TGG 0.449094 3_2:+71481903 Msa0422340:CDS
CTCAAGGGTTTATGGTTTGG+TGG 0.451141 3_2:-71476711 None:intergenic
GGATCTGATAAAGGCATTAA+GGG 0.453956 3_2:+71478767 Msa0422340:CDS
GCACTTGGCACAGATATTGA+AGG 0.457016 3_2:-71478131 None:intergenic
CATACACTTAGAGCAGATAA+TGG 0.458702 3_2:+71479695 Msa0422340:CDS
AAAACCAGCAAAGGAACATA+AGG 0.459013 3_2:+71479640 Msa0422340:CDS
CAGTCTCCAACAAAAGAAAC+AGG 0.460870 3_2:+71479422 Msa0422340:CDS
GAAGAATAAGAAAGATAAGA+GGG 0.463642 3_2:+71477422 Msa0422340:CDS
GCTGGTAAAATCGAGGGAGC+TGG 0.466007 3_2:+71479563 Msa0422340:CDS
TAATTCTATAGAACCTTTGA+AGG 0.467020 3_2:+71479129 Msa0422340:CDS
GGTGTCGATTCACGACAAAA+TGG 0.471685 3_2:+71480505 Msa0422340:CDS
AAACCAGCAAAGGAACATAA+GGG 0.474216 3_2:+71479641 Msa0422340:CDS
AGAAGCTCCAAGTTTACCTA+TGG 0.479624 3_2:+71477602 Msa0422340:CDS
ACTGGATCAGGTTCTTATGA+TGG 0.480969 3_2:+71481053 Msa0422340:intron
CTCTTGACCTTCATCTTCAG+AGG 0.482855 3_2:-71480401 None:intergenic
TCACATTCCATAGGTAAACT+TGG 0.484317 3_2:-71477609 None:intergenic
GGGAGATACATCATCTCAAA+AGG 0.486619 3_2:+71479150 Msa0422340:CDS
ATTGTGAATAATGCTTTAGT+TGG 0.487927 3_2:+71477342 Msa0422340:CDS
TAAAGAAGAAGCCTAAGAAA+AGG 0.490052 3_2:+71479089 Msa0422340:CDS
TCACATTCAATATTTAAACT+TGG 0.490981 3_2:-71477816 None:intergenic
TTATTGGTGTCAACAAAAGC+TGG 0.491773 3_2:+71477226 Msa0422340:CDS
CTGGTAAAATCGAGGGAGCT+GGG 0.497522 3_2:+71479564 Msa0422340:CDS
ACCTCAATCAAGGAACAAAC+AGG 0.501114 3_2:+71478289 Msa0422340:CDS
TCACATTCAATATGTAAACT+TGG 0.505226 3_2:-71478053 None:intergenic
TGAACTTGTAAGTAAGAGAC+TGG 0.506719 3_2:+71479967 Msa0422340:CDS
AATATCGCAACAATGCTTCT+GGG 0.507535 3_2:+71480188 Msa0422340:CDS
AGAAACCGTTTGTGATCCTC+CGG 0.507621 3_2:+71479766 Msa0422340:CDS
CATTGTCATGAAAGTGAAGC+TGG 0.507765 3_2:+71479545 Msa0422340:CDS
GTTTCTGAACATACTGCTAA+AGG 0.510342 3_2:+71477471 Msa0422340:CDS
CTTTCGGATGGACAATCGAC+AGG 0.511134 3_2:-71478239 None:intergenic
ACGGTACCGGAGTCAGAAAT+CGG 0.513527 3_2:-71476817 None:intergenic
AAACTGGATGCCCTTTCAGA+TGG 0.514071 3_2:-71478596 None:intergenic
TGCAGAGTGGGAAGAGAAAA+CGG 0.514904 3_2:+71477700 Msa0422340:CDS
GATACGGCGATTCCATTGCT+TGG 0.515224 3_2:+71477540 Msa0422340:CDS
TAGTGTTGATGTTTCTGCAT+TGG 0.516697 3_2:+71477254 Msa0422340:CDS
TATGGATTTGGATAAACAAA+GGG 0.516899 3_2:+71480216 Msa0422340:CDS
AAACAAGTGGGCGGTCAAAA+GGG 0.517875 3_2:-71478325 None:intergenic
CGTGTTCATATATATACTCA+AGG 0.517895 3_2:-71476727 None:intergenic
CTAAATCAAACTGAAGAGGA+AGG 0.518575 3_2:+71479815 Msa0422340:CDS
ATCGATGAAGACGACGGTAC+CGG 0.519160 3_2:-71476830 None:intergenic
TCTGTGTGCTCTGGAACACA+TGG 0.519830 3_2:-71478686 None:intergenic
CTGATGGAGCTCACGAGGAA+AGG 0.521888 3_2:+71479188 Msa0422340:CDS
GATGAAGCACAAACGGCTGA+TGG 0.523174 3_2:+71479172 Msa0422340:CDS
TCAAAAGGATGAAGCACAAA+CGG 0.524012 3_2:+71479165 Msa0422340:CDS
GACTCTATTGTATGTGAGGA+AGG 0.524881 3_2:+71478446 Msa0422340:CDS
GAGGTAGATGAATCCAATAA+AGG 0.524924 3_2:+71478413 Msa0422340:CDS
CATTCTCTGCAAAGATGGCT+CGG 0.525179 3_2:-71478943 None:intergenic
TTTCTTTCAAAGTGTCATCT+CGG 0.526131 3_2:-71478880 None:intergenic
AAGGATAACGAGAATGTTGT+CGG 0.527978 3_2:+71479518 Msa0422340:CDS
CACACGCATACTATTTAGAC+GGG 0.528271 3_2:+71480470 Msa0422340:CDS
CTCTCGACTGTCCATCTGAA+AGG 0.528617 3_2:+71478585 Msa0422340:CDS
CTATGGAATGTGAAGTAGAT+GGG 0.530261 3_2:+71477619 Msa0422340:CDS
AAAATCGAGGGAGCTGGGGA+AGG 0.530324 3_2:+71479569 Msa0422340:CDS
CTGGATCAGGTTCTTATGAT+GGG 0.530685 3_2:+71481054 Msa0422340:intron
ACGTCTACGAAAATCTGTCT+TGG 0.530906 3_2:-71477571 None:intergenic
ACATCAGATATGCTCACAAA+TGG 0.531038 3_2:+71480031 Msa0422340:CDS
TGAATCCAATAAAGGCACTA+AGG 0.531478 3_2:+71478421 Msa0422340:CDS
AAAAGAAGCCACTGTGGTAG+GGG 0.532643 3_2:+71477944 Msa0422340:CDS
TCTCGACTGTCCATCTGAAA+GGG 0.532726 3_2:+71478586 Msa0422340:CDS
CGATGTACACAGGATTGATA+AGG 0.533392 3_2:+71480081 Msa0422340:CDS
GAGGTAGATGGATCTGATAA+AGG 0.535818 3_2:+71478758 Msa0422340:CDS
GAAACACGTGGGTGATCAGA+AGG 0.536575 3_2:-71477987 None:intergenic
CGATAATAACACTGCGAACG+AGG 0.536966 3_2:+71479021 Msa0422340:CDS
TTAACTTACCTTGCTTTGAA+GGG 0.537573 3_2:-71481104 None:intergenic
TCACACGCATACTATTTAGA+CGG 0.538385 3_2:+71480469 Msa0422340:CDS
GATGATGTATCTCCCTTCAA+AGG 0.545208 3_2:-71479142 None:intergenic
AAACTGGATGTCCTTTCGGA+TGG 0.545328 3_2:-71478251 None:intergenic
TTGGGCTCATTCACATCTGA+AGG 0.553810 3_2:-71479485 None:intergenic
TAGAGCAGATAATGGTCTTG+TGG 0.553835 3_2:+71479703 Msa0422340:CDS
AATCAGATAAGTGATAAAAG+TGG 0.555386 3_2:-71477182 None:intergenic
AAATAAAGATGATGATAATG+TGG 0.557657 3_2:+71477653 Msa0422340:CDS
CAATTGATGATGTTGTTAGA+AGG 0.558706 3_2:+71481860 Msa0422340:CDS
GTATGGATTTGGATAAACAA+AGG 0.561010 3_2:+71480215 Msa0422340:CDS
AATAAGAAAGATAAGAGGGA+AGG 0.561237 3_2:+71477426 Msa0422340:CDS
GTCGGAGACGGTATCGTGAT+CGG 0.561541 3_2:-71476887 None:intergenic
AACATCTAATGCTGAAAATG+TGG 0.561789 3_2:+71479943 Msa0422340:CDS
TACAAACCTCGATACTCACT+TGG 0.566654 3_2:+71476852 Msa0422340:CDS
TAGAGGAGATTTGAGTTCTG+AGG 0.567085 3_2:-71479068 None:intergenic
GTCAGATGGAGTTCTAGTGC+TGG 0.567675 3_2:-71480443 None:intergenic
AGCTATAAAGAATTTGGAGA+TGG 0.567916 3_2:+71478367 Msa0422340:CDS
AGATGATGATAATGTGGGTG+TGG 0.568988 3_2:+71477659 Msa0422340:CDS
TCTTCTAAATCAAACTGAAG+AGG 0.569044 3_2:+71479811 Msa0422340:CDS
AAAGAAGTCCCTTCAAAGCA+AGG 0.570186 3_2:+71481096 Msa0422340:CDS
AGCTGTCACACATTTGGAGA+TGG 0.570498 3_2:+71478712 Msa0422340:CDS
AATGCTTTAGTTGGTTCTGG+TGG 0.570622 3_2:+71477351 Msa0422340:CDS
GACGGTATCGTGATCGGAGA+CGG 0.572722 3_2:-71476881 None:intergenic
CTGTTGTTGTACCAGTTAAG+CGG 0.572827 3_2:+71478912 Msa0422340:CDS
ATTCTTCAACAATTGCAACT+GGG 0.574037 3_2:-71477406 None:intergenic
GGTTAATGCTGTGACAATGA+AGG 0.574150 3_2:+71479042 Msa0422340:CDS
TTGGAGTTTGAACCAAGCAA+TGG 0.575376 3_2:-71477552 None:intergenic
ATTACTGGGTGATAATGATA+CGG 0.575467 3_2:+71477524 Msa0422340:CDS
GTGTTCATATATATACTCAA+GGG 0.576015 3_2:-71476726 None:intergenic
CCGGAAAATGCTGCAACACA+GGG 0.576365 3_2:+71479785 Msa0422340:CDS
GAAGGGATGGTAATGTTGCA+GGG 0.579243 3_2:+71479833 Msa0422340:CDS
TGTTGCAGAGCAAAATGAAA+AGG 0.581003 3_2:+71477767 Msa0422340:CDS
GCAACACGCAGACGATCAGA+AGG 0.583703 3_2:-71477750 None:intergenic
AGAAAGAGCGCGATGTACAC+AGG 0.584380 3_2:+71480071 Msa0422340:CDS
CTTCAATGTCTGTGCAGAGT+GGG 0.585400 3_2:+71477688 Msa0422340:CDS
TCATCCTTATTTCCTCCACC+AGG 0.586395 3_2:-71477849 None:intergenic
TCAAACTGAAGAGGAAGGGA+TGG 0.587094 3_2:+71479820 Msa0422340:CDS
TGAGCCCAAGGATCTGATGA+AGG 0.587164 3_2:+71479499 Msa0422340:CDS
TTCAGTATCATCCAATTGAG+AGG 0.587433 3_2:-71481914 None:intergenic
TGACGACGTGAATAGAATGA+AGG 0.588356 3_2:+71479610 Msa0422340:CDS
AGCAGTTCCTCTGAAGATGA+AGG 0.592851 3_2:+71480394 Msa0422340:CDS
CCATCTACTTCACATTCCAT+AGG 0.594220 3_2:-71477618 None:intergenic
AAATTCACATATTGAATGTG+AGG 0.595332 3_2:+71478394 Msa0422340:CDS
TGCGTAAGCAGTGTGCGAGA+TGG 0.595355 3_2:+71476789 Msa0422340:exon
AGCTTCTGGAAATCATGTCA+TGG 0.596316 3_2:+71480306 Msa0422340:CDS
AAAGGTAAGAATAAAGGCGG+AGG 0.597083 3_2:+71479671 Msa0422340:CDS
GGTGTCGCGAATATGGAGAA+TGG 0.597432 3_2:+71477495 Msa0422340:CDS
CAGTGTTACGTGAAACAAGT+GGG 0.602671 3_2:-71478337 None:intergenic
CAGAAGAAAAGCTTGTTAGA+GGG 0.603287 3_2:+71480349 Msa0422340:CDS
TAAATCAAACTGAAGAGGAA+GGG 0.603370 3_2:+71479816 Msa0422340:CDS
AATTCTATAGAACCTTTGAA+GGG 0.604101 3_2:+71479130 Msa0422340:CDS
TCATGGTTCACTTCGTCAGG+TGG 0.604108 3_2:+71477308 Msa0422340:CDS
GGATGACTCTATTGTATGTG+AGG 0.604480 3_2:+71478442 Msa0422340:CDS
TTCAGATGTGAATGAGCCCA+AGG 0.607289 3_2:+71479487 Msa0422340:CDS
TACTGAAGTTCAAGAGAGTG+AGG 0.611214 3_2:+71481930 Msa0422340:CDS
CTTTCAGATGGACAGTCGAG+AGG 0.612247 3_2:-71478584 None:intergenic
GTAGGGGATAGATCAAAAGA+AGG 0.614468 3_2:+71477960 Msa0422340:CDS
GAAGTAGATGGACCTGGTGG+AGG 0.614605 3_2:+71477837 Msa0422340:CDS
AAGCTTGTTTACGGATCATG+CGG 0.615796 3_2:+71482062 Msa0422340:three_prime_UTR
TGAAGATGAAGGTCAAGAGA+AGG 0.620985 3_2:+71480405 Msa0422340:CDS
TTAGACGGGAATGACAGTCC+AGG 0.621565 3_2:+71480484 Msa0422340:CDS
GGAACCTGTAAAACCAGCAA+AGG 0.623921 3_2:+71479631 Msa0422340:CDS
CTGTCGATTGTCCATCCGAA+AGG 0.624082 3_2:+71478240 Msa0422340:CDS
AAGGGATGGTAATGTTGCAG+GGG 0.628382 3_2:+71479834 Msa0422340:CDS
AATAAAGATGATGATAATGT+GGG 0.628938 3_2:+71477654 Msa0422340:CDS
AACGGCTGATGGAGCTCACG+AGG 0.630247 3_2:+71479183 Msa0422340:CDS
AACCAGCAAAGGAACATAAG+GGG 0.634243 3_2:+71479642 Msa0422340:CDS
TGGTAAAATCGAGGGAGCTG+GGG 0.636192 3_2:+71479565 Msa0422340:CDS
GAGAATGGTGTCAAATTACT+GGG 0.636399 3_2:+71477510 Msa0422340:CDS
AACTTGTGATTATAGATCAG+AGG 0.636441 3_2:-71481954 None:intergenic
AAACACGTGGGTGATCAGAA+GGG 0.637541 3_2:-71477986 None:intergenic
AGTGAAGCTGGTAAAATCGA+GGG 0.640437 3_2:+71479557 Msa0422340:CDS
GTTTATTAATTATACCATCG+TGG 0.643054 3_2:+71482105 Msa0422340:three_prime_UTR
GGACAGGGCATAAGATAAAG+GGG 0.643211 3_2:+71476686 None:intergenic
ACCAGCAAAGGAACATAAGG+GGG 0.644082 3_2:+71479643 Msa0422340:CDS
TCAGTGTTACGTGAAACAAG+TGG 0.647489 3_2:-71478338 None:intergenic
TATGCGTGTGAATTGTCAGA+TGG 0.648565 3_2:-71480457 None:intergenic
CAACACGCAGACGATCAGAA+GGG 0.649775 3_2:-71477749 None:intergenic
AACACGCAGACGATCAGAAG+GGG 0.653252 3_2:-71477748 None:intergenic
TGATCTATCCCCTACCACAG+TGG 0.654268 3_2:-71477952 None:intergenic
GAGGAAAGGAAAGAATCAGA+AGG 0.654785 3_2:+71479202 Msa0422340:CDS
AGGGATGGTAATGTTGCAGG+GGG 0.659114 3_2:+71479835 Msa0422340:CDS
TAATGCTGTGACAATGAAGG+AGG 0.660473 3_2:+71479045 Msa0422340:CDS
CTTGGCACTGATATTGAAGG+TGG 0.661039 3_2:-71477891 None:intergenic
TGACAAAATGGAGATTGGAG+CGG 0.661881 3_2:+71479379 Msa0422340:CDS
TCTTCAATGTCTGTGCAGAG+TGG 0.662030 3_2:+71477687 Msa0422340:CDS
CTGTGTGCTCTGGAACACAT+GGG 0.664614 3_2:-71478685 None:intergenic
AAGTGAAGCTGGTAAAATCG+AGG 0.665943 3_2:+71479556 Msa0422340:CDS
ACTGAAGTTCAAGAGAGTGA+GGG 0.668125 3_2:+71481931 Msa0422340:CDS
GGTTCTATAGAATTATGAGT+CGG 0.668323 3_2:-71479121 None:intergenic
AATTGCAACTGGGAATCACA+AGG 0.668666 3_2:-71477396 None:intergenic
GCAGTATGTTCAGAAACACA+AGG 0.673143 3_2:-71477465 None:intergenic
ACAGGAAATAATAATAAACA+AGG 0.678613 3_2:+71479440 Msa0422340:CDS
AAATTCACATACTCAATGTG+AGG 0.682423 3_2:+71478739 Msa0422340:CDS
GCGACGCCGATTTCTGACTC+CGG 0.688844 3_2:+71476811 Msa0422340:CDS
ATGTTGTTAGAAGGTCAACA+AGG 0.694006 3_2:+71481869 Msa0422340:CDS
TCAGTGTGCTCTGAAACACG+TGG 0.697465 3_2:-71477999 None:intergenic
TCTGAACATACTGCTAAAGG+AGG 0.700816 3_2:+71477474 Msa0422340:CDS
GAATGTGAAGTAGATGGACC+TGG 0.706472 3_2:+71477831 Msa0422340:CDS
CAGTATGTTCAGAAACACAA+GGG 0.708570 3_2:-71477464 None:intergenic
TAATAAATAATATACCACGA+TGG 0.730376 3_2:-71482119 None:intergenic
TGAGAGCCAAGTGAGTATCG+AGG 0.730669 3_2:-71476858 None:intergenic
CAGTGTGCTCTGAAACACGT+GGG 0.731588 3_2:-71477998 None:intergenic
TGTGAAGTAGATGGACCTGG+TGG 0.732563 3_2:+71477834 Msa0422340:CDS
GTTTGTATCGATGAAGACGA+CGG 0.749057 3_2:-71476836 None:intergenic
TGTTACGTGAAACAAGTGGG+CGG 0.765301 3_2:-71478334 None:intergenic
ACCTGACGAAGTGAACCATG+AGG 0.777791 3_2:-71477306 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTAACACAAAAATTAAT+AGG - chr3_2:71479267-71479286 None:intergenic 10.0%
!! ATACAAATAATAAGAAATAA+TGG + chr3_2:71481401-71481420 Msa0422340:intron 10.0%
!! AATAAAAAAGATGAAAAAGA+AGG + chr3_2:71478647-71478666 Msa0422340:CDS 15.0%
!! AACAATCATTATTTGAACAA+CGG - chr3_2:71477099-71477118 None:intergenic 20.0%
!!! AAATAAAGATGATGATAATG+TGG + chr3_2:71477653-71477672 Msa0422340:CDS 20.0%
!!! AATAAAGATGATGATAATGT+GGG + chr3_2:71477654-71477673 Msa0422340:CDS 20.0%
!! TCACATTCAATATTTAAACT+TGG - chr3_2:71477819-71477838 None:intergenic 20.0%
!! AAAAGAAGCTATAAAGAATT+TGG + chr3_2:71478361-71478380 Msa0422340:CDS 20.0%
!! TAACACAAAAATTAATAGGA+AGG - chr3_2:71479263-71479282 None:intergenic 20.0%
!! CCACAAAAATAACAATAATT+GGG - chr3_2:71479330-71479349 None:intergenic 20.0%
!!! CCAATTATTGTTATTTTTGT+GGG + chr3_2:71479328-71479347 Msa0422340:intron 20.0%
!! ACAGGAAATAATAATAAACA+AGG + chr3_2:71479440-71479459 Msa0422340:CDS 20.0%
!! GTAAAAAAAGGTAAGAATAA+AGG + chr3_2:71479665-71479684 Msa0422340:CDS 20.0%
!!! TTTATTTTGAACCATTTTGT+TGG - chr3_2:71480278-71480297 None:intergenic 20.0%
!! TGCACATAAATCATTTATTA+TGG + chr3_2:71480772-71480791 Msa0422340:intron 20.0%
!!! TAATTTTTCTGTTAACTACT+TGG + chr3_2:71480835-71480854 Msa0422340:intron 20.0%
!!! AATTTTTCTGTTAACTACTT+GGG + chr3_2:71480836-71480855 Msa0422340:intron 20.0%
!!! TTTTCATATAATTGGTTACT+AGG - chr3_2:71481341-71481360 None:intergenic 20.0%
!!! TACAACTGTTTTCATATAAT+TGG - chr3_2:71481349-71481368 None:intergenic 20.0%
!! CTAAAAGATGTTGTATTATA+GGG - chr3_2:71481434-71481453 None:intergenic 20.0%
!! TCTAAAAGATGTTGTATTAT+AGG - chr3_2:71481435-71481454 None:intergenic 20.0%
!!! ATAATACAACATCTTTTAGA+TGG + chr3_2:71481435-71481454 Msa0422340:intron 20.0%
!!! TTTTCTTTTAAGCTTGTTTA+CGG + chr3_2:71482053-71482072 Msa0422340:three_prime_UTR 20.0%
!! TAATAAATAATATACCACGA+TGG - chr3_2:71482122-71482141 None:intergenic 20.0%
! TATATATACTCAAGGGTTTA+TGG - chr3_2:71476722-71476741 None:intergenic 25.0%
! GTGTTCATATATATACTCAA+GGG - chr3_2:71476729-71476748 None:intergenic 25.0%
! AATCAGACAGATTGTAAATT+AGG + chr3_2:71476762-71476781 Msa0422340:five_prime_UTR 25.0%
! ATCAGACAGATTGTAAATTA+GGG + chr3_2:71476763-71476782 Msa0422340:five_prime_UTR 25.0%
!!! TATTCGTTTTTGTTTCTGTT+AGG + chr3_2:71477146-71477165 Msa0422340:intron 25.0%
! AATCAGATAAGTGATAAAAG+TGG - chr3_2:71477185-71477204 None:intergenic 25.0%
! TTATCACTTATCTGATTCAA+TGG + chr3_2:71477188-71477207 Msa0422340:CDS 25.0%
!! TGAGGTAACAATTTTTCATT+CGG - chr3_2:71477291-71477310 None:intergenic 25.0%
! AATGAAAAATTGTTACCTCA+TGG + chr3_2:71477291-71477310 Msa0422340:CDS 25.0%
! ATTGTGAATAATGCTTTAGT+TGG + chr3_2:71477342-71477361 Msa0422340:CDS 25.0%
! TGAAGAATAAGAAAGATAAG+AGG + chr3_2:71477421-71477440 Msa0422340:CDS 25.0%
! GAAGAATAAGAAAGATAAGA+GGG + chr3_2:71477422-71477441 Msa0422340:CDS 25.0%
! AATATTGAATGTGAAGTAGA+TGG + chr3_2:71477825-71477844 Msa0422340:CDS 25.0%
! TCACATTCAATATGTAAACT+TGG - chr3_2:71478056-71478075 None:intergenic 25.0%
! AAAGAATAAGAAAAACACTG+TGG + chr3_2:71478175-71478194 Msa0422340:CDS 25.0%
! AAGAATAAGAAAAACACTGT+GGG + chr3_2:71478176-71478195 Msa0422340:CDS 25.0%
! TCACATTCAATATGTGAATT+TGG - chr3_2:71478395-71478414 None:intergenic 25.0%
! AAATTCACATATTGAATGTG+AGG + chr3_2:71478394-71478413 Msa0422340:CDS 25.0%
! AAAGAAAAAAAAAGACACTG+TGG + chr3_2:71478520-71478539 Msa0422340:CDS 25.0%
! AAGAAAAAAAAAGACACTGT+GGG + chr3_2:71478521-71478540 Msa0422340:CDS 25.0%
! TGCAGATAAAGAAGTAATTA+AGG + chr3_2:71478964-71478983 Msa0422340:CDS 25.0%
! TAATTCTATAGAACCTTTGA+AGG + chr3_2:71479129-71479148 Msa0422340:CDS 25.0%
! AATTCTATAGAACCTTTGAA+GGG + chr3_2:71479130-71479149 Msa0422340:CDS 25.0%
!!! CCCAATTATTGTTATTTTTG+TGG + chr3_2:71479327-71479346 Msa0422340:intron 25.0%
! CCCACAAAAATAACAATAAT+TGG - chr3_2:71479331-71479350 None:intergenic 25.0%
!!! TTATTTCCTGTTTCTTTTGT+TGG - chr3_2:71479431-71479450 None:intergenic 25.0%
! TAAACAAGGTGATATTGAAA+TGG + chr3_2:71479454-71479473 Msa0422340:CDS 25.0%
! AAAAAAGGTAAGAATAAAGG+CGG + chr3_2:71479668-71479687 Msa0422340:CDS 25.0%
!! TTTTCGATTTTCAACAATTG+AGG - chr3_2:71480170-71480189 None:intergenic 25.0%
! TATGGATTTGGATAAACAAA+GGG + chr3_2:71480216-71480235 Msa0422340:CDS 25.0%
! ATCAACAGATACATTAATGA+AGG - chr3_2:71480561-71480580 None:intergenic 25.0%
! TAATGTATCTGTTGATATAG+TGG + chr3_2:71480565-71480584 Msa0422340:intron 25.0%
!! TAGTGGATACAAATATTCTT+TGG + chr3_2:71480582-71480601 Msa0422340:intron 25.0%
! AGTGGATACAAATATTCTTT+GGG + chr3_2:71480583-71480602 Msa0422340:intron 25.0%
!! ATTTTTCTGTTAACTACTTG+GGG + chr3_2:71480837-71480856 Msa0422340:intron 25.0%
! ATGAAAAATGAAACTGAGTA+TGG - chr3_2:71481226-71481245 None:intergenic 25.0%
!! CGTTGATAAATTCTATCAAT+TGG + chr3_2:71481286-71481305 Msa0422340:intron 25.0%
!!! GGTTATTTTTACTTAACTTG+AGG - chr3_2:71481315-71481334 None:intergenic 25.0%
! TTATTTGTATAGAGTGTAGA+TGG - chr3_2:71481391-71481410 None:intergenic 25.0%
!! TACAAATAATTGATGATAGC+AGG - chr3_2:71481557-71481576 None:intergenic 25.0%
! AAGCAAAAATATCACAACTA+CGG - chr3_2:71482004-71482023 None:intergenic 25.0%
! GTTTATTAATTATACCATCG+TGG + chr3_2:71482105-71482124 Msa0422340:three_prime_UTR 25.0%
CGTGTTCATATATATACTCA+AGG - chr3_2:71476730-71476749 None:intergenic 30.0%
TTCATGCTTCTTATATGTAG+AGG + chr3_2:71476989-71477008 Msa0422340:intron 30.0%
! ATCTGTATTTGTCCGATTTT+GGG - chr3_2:71477044-71477063 None:intergenic 30.0%
! AATCTGTATTTGTCCGATTT+TGG - chr3_2:71477045-71477064 None:intergenic 30.0%
AATACAGATTCATGGCATTA+AGG + chr3_2:71477055-71477074 Msa0422340:CDS 30.0%
AATCATTATTTGAACAACGG+TGG - chr3_2:71477096-71477115 None:intergenic 30.0%
TTCTGTTAGGTTAAACGTAA+TGG + chr3_2:71477159-71477178 Msa0422340:intron 30.0%
! AATAATGCTTTAGTTGGTTC+TGG + chr3_2:71477348-71477367 Msa0422340:CDS 30.0%
ATTCTTCAACAATTGCAACT+GGG - chr3_2:71477409-71477428 None:intergenic 30.0%
TATTCTTCAACAATTGCAAC+TGG - chr3_2:71477410-71477429 None:intergenic 30.0%
AATAAGAAAGATAAGAGGGA+AGG + chr3_2:71477426-71477445 Msa0422340:CDS 30.0%
! ATTACTGGGTGATAATGATA+CGG + chr3_2:71477524-71477543 Msa0422340:CDS 30.0%
AAAGGATGCTGTCAAAAATT+CGG + chr3_2:71477785-71477804 Msa0422340:CDS 30.0%
AGAAGCTGTGAAAAATTTAG+AGG + chr3_2:71478025-71478044 Msa0422340:CDS 30.0%
CATATTGAATGTGAAGTAGA+TGG + chr3_2:71478062-71478081 Msa0422340:CDS 30.0%
! ATCATCCTTATTTCTTTCAC+TGG - chr3_2:71478090-71478109 None:intergenic 30.0%
! ATCCAGTTTCAATGATTTTC+AGG + chr3_2:71478265-71478284 Msa0422340:CDS 30.0%
TACCTGAAAATCATTGAAAC+TGG - chr3_2:71478270-71478289 None:intergenic 30.0%
AGCTATAAAGAATTTGGAGA+TGG + chr3_2:71478367-71478386 Msa0422340:CDS 30.0%
! TTCTTCTTTTTCTTTGCACT+TGG - chr3_2:71478488-71478507 None:intergenic 30.0%
! ATCCAGTTTCAACAATTTTC+AGG + chr3_2:71478610-71478629 Msa0422340:CDS 30.0%
TCACATTGAGTATGTGAATT+TGG - chr3_2:71478740-71478759 None:intergenic 30.0%
AAATTCACATACTCAATGTG+AGG + chr3_2:71478739-71478758 Msa0422340:CDS 30.0%
! TTTCTTTCAAAGTGTCATCT+CGG - chr3_2:71478883-71478902 None:intergenic 30.0%
TAAAGAAGAAGCCTAAGAAA+AGG + chr3_2:71479089-71479108 Msa0422340:CDS 30.0%
GGTTCTATAGAATTATGAGT+CGG - chr3_2:71479124-71479143 None:intergenic 30.0%
CAAAACGAATCTTGACAAAA+TGG + chr3_2:71479367-71479386 Msa0422340:CDS 30.0%
AATCTTGACAAAATGGAGAT+TGG + chr3_2:71479374-71479393 Msa0422340:CDS 30.0%
TCTTCTAAATCAAACTGAAG+AGG + chr3_2:71479811-71479830 Msa0422340:CDS 30.0%
TAAATCAAACTGAAGAGGAA+GGG + chr3_2:71479816-71479835 Msa0422340:CDS 30.0%
AACATCTAATGCTGAAAATG+TGG + chr3_2:71479943-71479962 Msa0422340:CDS 30.0%
!! GTAGAAGATTGTTTGTTGTT+TGG - chr3_2:71480001-71480020 None:intergenic 30.0%
! ATTTTCAACAATTGAGGACA+TGG - chr3_2:71480164-71480183 None:intergenic 30.0%
GTATGGATTTGGATAAACAA+AGG + chr3_2:71480215-71480234 Msa0422340:CDS 30.0%
AATAAAGCAAGAAAAGCTTC+TGG + chr3_2:71480292-71480311 Msa0422340:CDS 30.0%
AAGATCAGATCTCAATGAAT+GGG - chr3_2:71480694-71480713 None:intergenic 30.0%
AAAGATCAGATCTCAATGAA+TGG - chr3_2:71480695-71480714 None:intergenic 30.0%
ATTCATTGAGATCTGATCTT+TGG + chr3_2:71480694-71480713 Msa0422340:intron 30.0%
CAGAAAAATTACCAAGTATG+CGG - chr3_2:71480826-71480845 None:intergenic 30.0%
ATCTTGCCTCTTCATAAAAA+TGG + chr3_2:71480982-71481001 Msa0422340:intron 30.0%
!! ACATCACCATTTTTATGAAG+AGG - chr3_2:71480991-71481010 None:intergenic 30.0%
! AAAATGGTGATGTCAAACTT+TGG + chr3_2:71480998-71481017 Msa0422340:intron 30.0%
CAGTTTGATACAAAATGAGA+GGG - chr3_2:71481037-71481056 None:intergenic 30.0%
! ATTTTGTATCAAACTGGATC+AGG + chr3_2:71481041-71481060 Msa0422340:intron 30.0%
! TTCTTATGATGGGAAAAGAT+TGG + chr3_2:71481064-71481083 Msa0422340:CDS 30.0%
! TTAACTTACCTTGCTTTGAA+GGG - chr3_2:71481107-71481126 None:intergenic 30.0%
ATTAACTTACCTTGCTTTGA+AGG - chr3_2:71481108-71481127 None:intergenic 30.0%
ATATAATTGGTTACTAGGAC+TGG - chr3_2:71481336-71481355 None:intergenic 30.0%
AAAACAGTTGTACAAGTGAT+GGG + chr3_2:71481357-71481376 Msa0422340:intron 30.0%
! TACAACATCTTTTAGATGGA+TGG + chr3_2:71481439-71481458 Msa0422340:intron 30.0%
TACATCTCTCACATAATGAT+CGG - chr3_2:71481499-71481518 None:intergenic 30.0%
CTATACATCATTGTAGATGA+TGG + chr3_2:71481710-71481729 Msa0422340:intron 30.0%
!!! TAGATGATGGATGTTTTTGT+GGG + chr3_2:71481723-71481742 Msa0422340:intron 30.0%
!! CAATTGATGATGTTGTTAGA+AGG + chr3_2:71481860-71481879 Msa0422340:CDS 30.0%
AACTTGTGATTATAGATCAG+AGG - chr3_2:71481957-71481976 None:intergenic 30.0%
AAAGAAAATCAGCACTGTTT+GGG - chr3_2:71482041-71482060 None:intergenic 30.0%
AAAAGAAAATCAGCACTGTT+TGG - chr3_2:71482042-71482061 None:intergenic 30.0%
ATACTCAAGGGTTTATGGTT+TGG - chr3_2:71476717-71476736 None:intergenic 35.0%
!!! AGAGAGATTACTTTTGAGGT+CGG - chr3_2:71476908-71476927 None:intergenic 35.0%
!! AGAGAGAGAGATTACTTTTG+AGG - chr3_2:71476912-71476931 None:intergenic 35.0%
CTTTCATGCTTTCCCAAAAT+CGG + chr3_2:71477029-71477048 Msa0422340:CDS 35.0%
ATCGGACAAATACAGATTCA+TGG + chr3_2:71477047-71477066 Msa0422340:CDS 35.0%
!!! GTTGTGAGAAGTGCTTTTAT+TGG + chr3_2:71477210-71477229 Msa0422340:CDS 35.0%
!! TTATTGGTGTCAACAAAAGC+TGG + chr3_2:71477226-71477245 Msa0422340:CDS 35.0%
!! TAGTGTTGATGTTTCTGCAT+TGG + chr3_2:71477254-71477273 Msa0422340:CDS 35.0%
CAGTATGTTCAGAAACACAA+GGG - chr3_2:71477467-71477486 None:intergenic 35.0%
GTTTCTGAACATACTGCTAA+AGG + chr3_2:71477471-71477490 Msa0422340:CDS 35.0%
! GAGAATGGTGTCAAATTACT+GGG + chr3_2:71477510-71477529 Msa0422340:CDS 35.0%
TCACATTCCATAGGTAAACT+TGG - chr3_2:71477612-71477631 None:intergenic 35.0%
CTATGGAATGTGAAGTAGAT+GGG + chr3_2:71477619-71477638 Msa0422340:CDS 35.0%
TGTTGCAGAGCAAAATGAAA+AGG + chr3_2:71477767-71477786 Msa0422340:CDS 35.0%
TTCTTTCTTCTCTTTGCACT+TGG - chr3_2:71477912-71477931 None:intergenic 35.0%
AAAGAAAAAAGAAGCCACTG+TGG + chr3_2:71477938-71477957 Msa0422340:CDS 35.0%
AGCTGTGAAAAATTTAGAGG+TGG + chr3_2:71478028-71478047 Msa0422340:CDS 35.0%
TGGATCCAGTGAAAGAAATA+AGG + chr3_2:71478082-71478101 Msa0422340:CDS 35.0%
!!! TTGCTTTTTCTCTTTGCACT+TGG - chr3_2:71478149-71478168 None:intergenic 35.0%
AATAAGAAAAACACTGTGGG+AGG + chr3_2:71478179-71478198 Msa0422340:CDS 35.0%
ATTGAAACTGGATGTCCTTT+CGG - chr3_2:71478258-71478277 None:intergenic 35.0%
!!! ATTTTCAGGTACCTCAATCA+AGG + chr3_2:71478279-71478298 Msa0422340:CDS 35.0%
GAGGTAGATGAATCCAATAA+AGG + chr3_2:71478413-71478432 Msa0422340:CDS 35.0%
!! TGAATCCAATAAAGGCACTA+AGG + chr3_2:71478421-71478440 Msa0422340:CDS 35.0%
AAAAAAAAAGACACTGTGGG+AGG + chr3_2:71478524-71478543 Msa0422340:CDS 35.0%
CACCTGAAAATTGTTGAAAC+TGG - chr3_2:71478615-71478634 None:intergenic 35.0%
AGAAAAAGCTGTCACACATT+TGG + chr3_2:71478706-71478725 Msa0422340:CDS 35.0%
!! TGGATCTGATAAAGGCATTA+AGG + chr3_2:71478766-71478785 Msa0422340:CDS 35.0%
!! GGATCTGATAAAGGCATTAA+GGG + chr3_2:71478767-71478786 Msa0422340:CDS 35.0%
CTTCTTCTTTGCACTTTGTA+CGG - chr3_2:71478828-71478847 None:intergenic 35.0%
! AGAAGAAGCATAAGAGTGTA+AGG + chr3_2:71478840-71478859 Msa0422340:CDS 35.0%
!! TAAGGCAACTGAAGTTTTGA+AGG + chr3_2:71478982-71479001 Msa0422340:CDS 35.0%
TTCTTAGGCTTCTTCTTTAG+AGG - chr3_2:71479088-71479107 None:intergenic 35.0%
TCAAAAGGATGAAGCACAAA+CGG + chr3_2:71479165-71479184 Msa0422340:CDS 35.0%
AGGTGATACTACTCAGTAAA+TGG + chr3_2:71479222-71479241 Msa0422340:intron 35.0%
GGTGATACTACTCAGTAAAT+GGG + chr3_2:71479223-71479242 Msa0422340:intron 35.0%
TTATCCTTCATCAGATCCTT+GGG - chr3_2:71479506-71479525 None:intergenic 35.0%
AAGGATAACGAGAATGTTGT+CGG + chr3_2:71479518-71479537 Msa0422340:CDS 35.0%
AAAACCAGCAAAGGAACATA+AGG + chr3_2:71479640-71479659 Msa0422340:CDS 35.0%
AAACCAGCAAAGGAACATAA+GGG + chr3_2:71479641-71479660 Msa0422340:CDS 35.0%
GAACATAAGGGGGTAAAAAA+AGG + chr3_2:71479653-71479672 Msa0422340:CDS 35.0%
CATACACTTAGAGCAGATAA+TGG + chr3_2:71479695-71479714 Msa0422340:CDS 35.0%
CTAAATCAAACTGAAGAGGA+AGG + chr3_2:71479815-71479834 Msa0422340:CDS 35.0%
TGTTCTTTCTGTGACTGATA+AGG + chr3_2:71479871-71479890 Msa0422340:CDS 35.0%
GTTCTTTCTGTGACTGATAA+GGG + chr3_2:71479872-71479891 Msa0422340:CDS 35.0%
!!! TGTTGTTTTAGTTTGCTCCA+AGG - chr3_2:71479927-71479946 None:intergenic 35.0%
TGAACTTGTAAGTAAGAGAC+TGG + chr3_2:71479967-71479986 Msa0422340:CDS 35.0%
ACATCAGATATGCTCACAAA+TGG + chr3_2:71480031-71480050 Msa0422340:CDS 35.0%
AAATATCGCAACAATGCTTC+TGG + chr3_2:71480187-71480206 Msa0422340:CDS 35.0%
AATATCGCAACAATGCTTCT+GGG + chr3_2:71480188-71480207 Msa0422340:CDS 35.0%
! TTCTGGGAAAAGTATGGATT+TGG + chr3_2:71480204-71480223 Msa0422340:CDS 35.0%
TCAAGCTTTGCAGTTGAAAT+AGG - chr3_2:71480250-71480269 None:intergenic 35.0%
ATTTCAACTGCAAAGCTTGA+AGG + chr3_2:71480250-71480269 Msa0422340:CDS 35.0%
!! CAGAAGAAAAGCTTGTTAGA+GGG + chr3_2:71480349-71480368 Msa0422340:CDS 35.0%
TCACACGCATACTATTTAGA+CGG + chr3_2:71480469-71480488 Msa0422340:CDS 35.0%
GGATACAAATATTCTTTGGG+TGG + chr3_2:71480586-71480605 Msa0422340:intron 35.0%
ACAAATATTCTTTGGGTGGA+TGG + chr3_2:71480590-71480609 Msa0422340:intron 35.0%
AGATCAGATCTCAATGAATG+GGG - chr3_2:71480693-71480712 None:intergenic 35.0%
! GGCACTATTTTCTTATCTAC+TGG + chr3_2:71480858-71480877 Msa0422340:intron 35.0%
GGACTTACTCAGAAAACTTT+CGG + chr3_2:71480879-71480898 Msa0422340:intron 35.0%
CCAGTTTGATACAAAATGAG+AGG - chr3_2:71481038-71481057 None:intergenic 35.0%
! CCTCTCATTTTGTATCAAAC+TGG + chr3_2:71481035-71481054 Msa0422340:intron 35.0%
GAAAACAGTTGTACAAGTGA+TGG + chr3_2:71481356-71481375 Msa0422340:intron 35.0%
TTGTGCTCATAGTTATAGCT+TGG + chr3_2:71481530-71481549 Msa0422340:intron 35.0%
TGTGCTCATAGTTATAGCTT+GGG + chr3_2:71481531-71481550 Msa0422340:intron 35.0%
!!! GTAGATGATGGATGTTTTTG+TGG + chr3_2:71481722-71481741 Msa0422340:intron 35.0%
ATGTTGTTAGAAGGTCAACA+AGG + chr3_2:71481869-71481888 Msa0422340:CDS 35.0%
TTCAGTATCATCCAATTGAG+AGG - chr3_2:71481917-71481936 None:intergenic 35.0%
! TTTTTCGTCAACGTTCTTAC+CGG + chr3_2:71482201-71482220 Msa0422340:three_prime_UTR 35.0%
! GTTTGTATCGATGAAGACGA+CGG - chr3_2:71476839-71476858 None:intergenic 40.0%
TACAAACCTCGATACTCACT+TGG + chr3_2:71476852-71476871 Msa0422340:CDS 40.0%
!!! ATTACTTTTGAGGTCGGAGA+CGG - chr3_2:71476902-71476921 None:intergenic 40.0%
!! AATGCTTTAGTTGGTTCTGG+TGG + chr3_2:71477351-71477370 Msa0422340:CDS 40.0%
! GTTCTGGTGGCGATAATAAT+GGG + chr3_2:71477364-71477383 Msa0422340:CDS 40.0%
AATTGCAACTGGGAATCACA+AGG - chr3_2:71477399-71477418 None:intergenic 40.0%
GCAGTATGTTCAGAAACACA+AGG - chr3_2:71477468-71477487 None:intergenic 40.0%
TCTGAACATACTGCTAAAGG+AGG + chr3_2:71477474-71477493 Msa0422340:CDS 40.0%
! GGAGAATGGTGTCAAATTAC+TGG + chr3_2:71477509-71477528 Msa0422340:CDS 40.0%
TTGGAGTTTGAACCAAGCAA+TGG - chr3_2:71477555-71477574 None:intergenic 40.0%
ACGTCTACGAAAATCTGTCT+TGG - chr3_2:71477574-71477593 None:intergenic 40.0%
AGAAGCTCCAAGTTTACCTA+TGG + chr3_2:71477602-71477621 Msa0422340:CDS 40.0%
CCATCTACTTCACATTCCAT+AGG - chr3_2:71477621-71477640 None:intergenic 40.0%
CCTATGGAATGTGAAGTAGA+TGG + chr3_2:71477618-71477637 Msa0422340:CDS 40.0%
! GAAGTAGATGGGCTTGATAA+AGG + chr3_2:71477630-71477649 Msa0422340:CDS 40.0%
! AGATGATGATAATGTGGGTG+TGG + chr3_2:71477659-71477678 Msa0422340:CDS 40.0%
AGAGAAAACGGAAGAGTAAG+AGG + chr3_2:71477712-71477731 Msa0422340:CDS 40.0%
TGCTGTCAAAAATTCGGAGA+TGG + chr3_2:71477791-71477810 Msa0422340:CDS 40.0%
AAAAAAGAAGCCACTGTGGT+AGG + chr3_2:71477942-71477961 Msa0422340:CDS 40.0%
AAAAAGAAGCCACTGTGGTA+GGG + chr3_2:71477943-71477962 Msa0422340:CDS 40.0%
GTAGGGGATAGATCAAAAGA+AGG + chr3_2:71477960-71477979 Msa0422340:CDS 40.0%
ACCTCAATCAAGGAACAAAC+AGG + chr3_2:71478289-71478308 Msa0422340:CDS 40.0%
TCCTGTTTGTTCCTTGATTG+AGG - chr3_2:71478293-71478312 None:intergenic 40.0%
CAGTGTTACGTGAAACAAGT+GGG - chr3_2:71478340-71478359 None:intergenic 40.0%
TCAGTGTTACGTGAAACAAG+TGG - chr3_2:71478341-71478360 None:intergenic 40.0%
GTCATCCTTAGTGCCTTTAT+TGG - chr3_2:71478429-71478448 None:intergenic 40.0%
GGATGACTCTATTGTATGTG+AGG + chr3_2:71478442-71478461 Msa0422340:CDS 40.0%
GACTCTATTGTATGTGAGGA+AGG + chr3_2:71478446-71478465 Msa0422340:CDS 40.0%
!!! TTTTTCTTTGCACTTGGTGC+GGG - chr3_2:71478482-71478501 None:intergenic 40.0%
!! CTTTTTCTTTGCACTTGGTG+CGG - chr3_2:71478483-71478502 None:intergenic 40.0%
CATACTCAATGTGAGGTAGA+TGG + chr3_2:71478746-71478765 Msa0422340:CDS 40.0%
GAGGTAGATGGATCTGATAA+AGG + chr3_2:71478758-71478777 Msa0422340:CDS 40.0%
GACTCTATTGTATGCGAGAA+AGG + chr3_2:71478791-71478810 Msa0422340:CDS 40.0%
CTGTTGTTGTACCAGTTAAG+CGG + chr3_2:71478912-71478931 Msa0422340:CDS 40.0%
ATCTGCATTCTCTGCAAAGA+TGG - chr3_2:71478951-71478970 None:intergenic 40.0%
GGTTAATGCTGTGACAATGA+AGG + chr3_2:71479042-71479061 Msa0422340:CDS 40.0%
TAATGCTGTGACAATGAAGG+AGG + chr3_2:71479045-71479064 Msa0422340:CDS 40.0%
! TAGAGGAGATTTGAGTTCTG+AGG - chr3_2:71479071-71479090 None:intergenic 40.0%
! GGAGATCTCTTCCTTTTCTT+AGG - chr3_2:71479103-71479122 None:intergenic 40.0%
GATGATGTATCTCCCTTCAA+AGG - chr3_2:71479145-71479164 None:intergenic 40.0%
GGGAGATACATCATCTCAAA+AGG + chr3_2:71479150-71479169 Msa0422340:CDS 40.0%
GAGGAAAGGAAAGAATCAGA+AGG + chr3_2:71479202-71479221 Msa0422340:CDS 40.0%
TGACAAAATGGAGATTGGAG+CGG + chr3_2:71479379-71479398 Msa0422340:CDS 40.0%
CAGTCTCCAACAAAAGAAAC+AGG + chr3_2:71479422-71479441 Msa0422340:CDS 40.0%
GTTATCCTTCATCAGATCCT+TGG - chr3_2:71479507-71479526 None:intergenic 40.0%
CATTGTCATGAAAGTGAAGC+TGG + chr3_2:71479545-71479564 Msa0422340:CDS 40.0%
AAGTGAAGCTGGTAAAATCG+AGG + chr3_2:71479556-71479575 Msa0422340:CDS 40.0%
AGTGAAGCTGGTAAAATCGA+GGG + chr3_2:71479557-71479576 Msa0422340:CDS 40.0%
!! CTATTCACGTCGTCATTTTG+TGG - chr3_2:71479605-71479624 None:intergenic 40.0%
TGACGACGTGAATAGAATGA+AGG + chr3_2:71479610-71479629 Msa0422340:CDS 40.0%
!!! TGTTCCTTTGCTGGTTTTAC+AGG - chr3_2:71479638-71479657 None:intergenic 40.0%
AACCAGCAAAGGAACATAAG+GGG + chr3_2:71479642-71479661 Msa0422340:CDS 40.0%
AAAGGTAAGAATAAAGGCGG+AGG + chr3_2:71479671-71479690 Msa0422340:CDS 40.0%
! TAGAGCAGATAATGGTCTTG+TGG + chr3_2:71479703-71479722 Msa0422340:CDS 40.0%
! ATTTTCCGGAGGATCACAAA+CGG - chr3_2:71479774-71479793 None:intergenic 40.0%
!! TAAGGGAAGTGATTTTAGCG+CGG + chr3_2:71479889-71479908 Msa0422340:CDS 40.0%
CATATCTGATGTGCTCTTTG+AGG - chr3_2:71480023-71480042 None:intergenic 40.0%
CGATGTACACAGGATTGATA+AGG + chr3_2:71480081-71480100 Msa0422340:CDS 40.0%
! CAATGCTTCTGGGAAAAGTA+TGG + chr3_2:71480198-71480217 Msa0422340:CDS 40.0%
GCTTGAAGGTTCCAACAAAA+TGG + chr3_2:71480264-71480283 Msa0422340:CDS 40.0%
! AGCTTCTGGAAATCATGTCA+TGG + chr3_2:71480306-71480325 Msa0422340:CDS 40.0%
!! GCAGAAGAAAAGCTTGTTAG+AGG + chr3_2:71480348-71480367 Msa0422340:CDS 40.0%
! GTTAGAGGGAGCAATTTTCA+AGG + chr3_2:71480363-71480382 Msa0422340:CDS 40.0%
TGAAGATGAAGGTCAAGAGA+AGG + chr3_2:71480405-71480424 Msa0422340:CDS 40.0%
TATGCGTGTGAATTGTCAGA+TGG - chr3_2:71480460-71480479 None:intergenic 40.0%
CACACGCATACTATTTAGAC+GGG + chr3_2:71480470-71480489 Msa0422340:CDS 40.0%
TCTCAATGAATGGGGTGAAA+AGG - chr3_2:71480685-71480704 None:intergenic 40.0%
ACTGGATCAGGTTCTTATGA+TGG + chr3_2:71481053-71481072 Msa0422340:intron 40.0%
CTGGATCAGGTTCTTATGAT+GGG + chr3_2:71481054-71481073 Msa0422340:intron 40.0%
AAAGAAGTCCCTTCAAAGCA+AGG + chr3_2:71481096-71481115 Msa0422340:CDS 40.0%
ATCTCTCACATAATGATCGG+CGG - chr3_2:71481496-71481515 None:intergenic 40.0%
! TATAGATGCTTTTGTCTGCC+TGG + chr3_2:71481656-71481675 Msa0422340:intron 40.0%
! ATAGATGCTTTTGTCTGCCT+GGG + chr3_2:71481657-71481676 Msa0422340:intron 40.0%
CATTCTTTGTCCAGTTTGTC+AGG + chr3_2:71481823-71481842 Msa0422340:intron 40.0%
CAATTGAGAGGTTGTCATTC+TGG - chr3_2:71481905-71481924 None:intergenic 40.0%
CAGAATGACAACCTCTCAAT+TGG + chr3_2:71481903-71481922 Msa0422340:CDS 40.0%
TACTGAAGTTCAAGAGAGTG+AGG + chr3_2:71481930-71481949 Msa0422340:CDS 40.0%
ACTGAAGTTCAAGAGAGTGA+GGG + chr3_2:71481931-71481950 Msa0422340:CDS 40.0%
! AAGCTTGTTTACGGATCATG+CGG + chr3_2:71482062-71482081 Msa0422340:three_prime_UTR 40.0%
! CTCAAGGGTTTATGGTTTGG+TGG - chr3_2:71476714-71476733 None:intergenic 45.0%
CTTCGTCAGGTGGAATCTAT+TGG + chr3_2:71477318-71477337 Msa0422340:CDS 45.0%
! GGTTCTGGTGGCGATAATAA+TGG + chr3_2:71477363-71477382 Msa0422340:CDS 45.0%
!! TAAAGGAGGTGTCGCGAATA+TGG + chr3_2:71477488-71477507 Msa0422340:CDS 45.0%
TCTTCAATGTCTGTGCAGAG+TGG + chr3_2:71477687-71477706 Msa0422340:CDS 45.0%
CTTCAATGTCTGTGCAGAGT+GGG + chr3_2:71477688-71477707 Msa0422340:CDS 45.0%
TGCAGAGTGGGAAGAGAAAA+CGG + chr3_2:71477700-71477719 Msa0422340:CDS 45.0%
GAATGTGAAGTAGATGGACC+TGG + chr3_2:71477831-71477850 Msa0422340:CDS 45.0%
! TCATCCTTATTTCCTCCACC+AGG - chr3_2:71477852-71477871 None:intergenic 45.0%
!! CTTGGCACTGATATTGAAGG+TGG - chr3_2:71477894-71477913 None:intergenic 45.0%
!! GCACTTGGCACTGATATTGA+AGG - chr3_2:71477897-71477916 None:intergenic 45.0%
AAAAGAAGCCACTGTGGTAG+GGG + chr3_2:71477944-71477963 Msa0422340:CDS 45.0%
AAACACGTGGGTGATCAGAA+GGG - chr3_2:71477989-71478008 None:intergenic 45.0%
GCACTTGGCACAGATATTGA+AGG - chr3_2:71478134-71478153 None:intergenic 45.0%
AAACTGGATGTCCTTTCGGA+TGG - chr3_2:71478254-71478273 None:intergenic 45.0%
AAACAAGTGGGCGGTCAAAA+GGG - chr3_2:71478328-71478347 None:intergenic 45.0%
TGTTACGTGAAACAAGTGGG+CGG - chr3_2:71478337-71478356 None:intergenic 45.0%
TCTCGACTGTCCATCTGAAA+GGG + chr3_2:71478586-71478605 Msa0422340:CDS 45.0%
AAACTGGATGCCCTTTCAGA+TGG - chr3_2:71478599-71478618 None:intergenic 45.0%
GAACACATGGGCGATCAAAA+AGG - chr3_2:71478676-71478695 None:intergenic 45.0%
!! ACAGCTTTTTCTGTGTGCTC+TGG - chr3_2:71478698-71478717 None:intergenic 45.0%
AGCTGTCACACATTTGGAGA+TGG + chr3_2:71478712-71478731 Msa0422340:CDS 45.0%
CGGACAATATTCCGCTTAAC+TGG - chr3_2:71478926-71478945 None:intergenic 45.0%
CATTCTCTGCAAAGATGGCT+CGG - chr3_2:71478946-71478965 None:intergenic 45.0%
CGATAATAACACTGCGAACG+AGG + chr3_2:71479021-71479040 Msa0422340:CDS 45.0%
TTGGGCTCATTCACATCTGA+AGG - chr3_2:71479488-71479507 None:intergenic 45.0%
TTCAGATGTGAATGAGCCCA+AGG + chr3_2:71479487-71479506 Msa0422340:CDS 45.0%
GGAACCTGTAAAACCAGCAA+AGG + chr3_2:71479631-71479650 Msa0422340:CDS 45.0%
ACCAGCAAAGGAACATAAGG+GGG + chr3_2:71479643-71479662 Msa0422340:CDS 45.0%
AGAAACCGTTTGTGATCCTC+CGG + chr3_2:71479766-71479785 Msa0422340:CDS 45.0%
TCAAACTGAAGAGGAAGGGA+TGG + chr3_2:71479820-71479839 Msa0422340:CDS 45.0%
! GAAGGGATGGTAATGTTGCA+GGG + chr3_2:71479833-71479852 Msa0422340:CDS 45.0%
! AAGGGATGGTAATGTTGCAG+GGG + chr3_2:71479834-71479853 Msa0422340:CDS 45.0%
ATGTTGCAGGGGGAAATACA+AGG + chr3_2:71479845-71479864 Msa0422340:CDS 45.0%
TGTTGCAGGGGGAAATACAA+GGG + chr3_2:71479846-71479865 Msa0422340:CDS 45.0%
! TGTCGAGTCTTGTGTGCATT+TGG - chr3_2:71480109-71480128 None:intergenic 45.0%
! AGCAGTTCCTCTGAAGATGA+AGG + chr3_2:71480394-71480413 Msa0422340:CDS 45.0%
CTCTTGACCTTCATCTTCAG+AGG - chr3_2:71480404-71480423 None:intergenic 45.0%
! TTTTGTCGTGAATCGACACC+TGG - chr3_2:71480505-71480524 None:intergenic 45.0%
!! GGTGTCGATTCACGACAAAA+TGG + chr3_2:71480505-71480524 Msa0422340:CDS 45.0%
CTTGCAGCTCTTCAAACACA+AGG - chr3_2:71480750-71480769 None:intergenic 45.0%
GCAAGTAGCAGTAGAACTTG+AGG - chr3_2:71481587-71481606 None:intergenic 45.0%
!! TTTTGCTGTGCCTGACAAAC+TGG - chr3_2:71481836-71481855 None:intergenic 45.0%
! ATCAGCACTGTTTGGGATGA+AGG - chr3_2:71482034-71482053 None:intergenic 45.0%
!! ATTATAAATTATAAATTAGA+AGG - chr3_2:71481249-71481268 None:intergenic 5.0%
! ACGGTACCGGAGTCAGAAAT+CGG - chr3_2:71476820-71476839 None:intergenic 50.0%
ATCGATGAAGACGACGGTAC+CGG - chr3_2:71476833-71476852 None:intergenic 50.0%
! TGAGAGCCAAGTGAGTATCG+AGG - chr3_2:71476861-71476880 None:intergenic 50.0%
ACCTCATGGTTCACTTCGTC+AGG + chr3_2:71477305-71477324 Msa0422340:CDS 50.0%
ACCTGACGAAGTGAACCATG+AGG - chr3_2:71477309-71477328 None:intergenic 50.0%
TCATGGTTCACTTCGTCAGG+TGG + chr3_2:71477308-71477327 Msa0422340:CDS 50.0%
! GGTGTCGCGAATATGGAGAA+TGG + chr3_2:71477495-71477514 Msa0422340:CDS 50.0%
GATACGGCGATTCCATTGCT+TGG + chr3_2:71477540-71477559 Msa0422340:CDS 50.0%
AACACGCAGACGATCAGAAG+GGG - chr3_2:71477751-71477770 None:intergenic 50.0%
CAACACGCAGACGATCAGAA+GGG - chr3_2:71477752-71477771 None:intergenic 50.0%
TGTGAAGTAGATGGACCTGG+TGG + chr3_2:71477834-71477853 Msa0422340:CDS 50.0%
TGGACCTGGTGGAGGAAATA+AGG + chr3_2:71477845-71477864 Msa0422340:CDS 50.0%
TGATCTATCCCCTACCACAG+TGG - chr3_2:71477955-71477974 None:intergenic 50.0%
GAAACACGTGGGTGATCAGA+AGG - chr3_2:71477990-71478009 None:intergenic 50.0%
!! CAGTGTGCTCTGAAACACGT+GGG - chr3_2:71478001-71478020 None:intergenic 50.0%
!! TCAGTGTGCTCTGAAACACG+TGG - chr3_2:71478002-71478021 None:intergenic 50.0%
CTTTCGGATGGACAATCGAC+AGG - chr3_2:71478242-71478261 None:intergenic 50.0%
! CTGTCGATTGTCCATCCGAA+AGG + chr3_2:71478240-71478259 Msa0422340:CDS 50.0%
GAAACAAGTGGGCGGTCAAA+AGG - chr3_2:71478329-71478348 None:intergenic 50.0%
CTTTCAGATGGACAGTCGAG+AGG - chr3_2:71478587-71478606 None:intergenic 50.0%
CTCTCGACTGTCCATCTGAA+AGG + chr3_2:71478585-71478604 Msa0422340:CDS 50.0%
!! CTGTGTGCTCTGGAACACAT+GGG - chr3_2:71478688-71478707 None:intergenic 50.0%
!! TCTGTGTGCTCTGGAACACA+TGG - chr3_2:71478689-71478708 None:intergenic 50.0%
GATGAAGCACAAACGGCTGA+TGG + chr3_2:71479172-71479191 Msa0422340:CDS 50.0%
TGAGCCCAAGGATCTGATGA+AGG + chr3_2:71479499-71479518 Msa0422340:CDS 50.0%
CTGGTAAAATCGAGGGAGCT+GGG + chr3_2:71479564-71479583 Msa0422340:CDS 50.0%
TGGTAAAATCGAGGGAGCTG+GGG + chr3_2:71479565-71479584 Msa0422340:CDS 50.0%
ACCCCCTTATGTTCCTTTGC+TGG - chr3_2:71479647-71479666 None:intergenic 50.0%
! TGTGTTGCAGCATTTTCCGG+AGG - chr3_2:71479785-71479804 None:intergenic 50.0%
TCCGGAAAATGCTGCAACAC+AGG + chr3_2:71479784-71479803 Msa0422340:CDS 50.0%
! CCCTGTGTTGCAGCATTTTC+CGG - chr3_2:71479788-71479807 None:intergenic 50.0%
CCGGAAAATGCTGCAACACA+GGG + chr3_2:71479785-71479804 Msa0422340:CDS 50.0%
! GGAAGGGATGGTAATGTTGC+AGG + chr3_2:71479832-71479851 Msa0422340:CDS 50.0%
! AGGGATGGTAATGTTGCAGG+GGG + chr3_2:71479835-71479854 Msa0422340:CDS 50.0%
! AGAAAGAGCGCGATGTACAC+AGG + chr3_2:71480071-71480090 Msa0422340:CDS 50.0%
! GTCAGATGGAGTTCTAGTGC+TGG - chr3_2:71480446-71480465 None:intergenic 50.0%
TTAGACGGGAATGACAGTCC+AGG + chr3_2:71480484-71480503 Msa0422340:CDS 50.0%
ACAGTGCATGTCCGCATACT+TGG + chr3_2:71480812-71480831 Msa0422340:intron 50.0%
! TCAATGCAGAGTACCTCAGC+CGG - chr3_2:71482223-71482242 None:intergenic 50.0%
TGCGTAAGCAGTGTGCGAGA+TGG + chr3_2:71476789-71476808 Msa0422340:exon 55.0%
GACGGTATCGTGATCGGAGA+CGG - chr3_2:71476884-71476903 None:intergenic 55.0%
GTCGGAGACGGTATCGTGAT+CGG - chr3_2:71476890-71476909 None:intergenic 55.0%
GCAACACGCAGACGATCAGA+AGG - chr3_2:71477753-71477772 None:intergenic 55.0%
GAAGTAGATGGACCTGGTGG+AGG + chr3_2:71477837-71477856 Msa0422340:CDS 55.0%
CTGATGGAGCTCACGAGGAA+AGG + chr3_2:71479188-71479207 Msa0422340:CDS 55.0%
GCTGGTAAAATCGAGGGAGC+TGG + chr3_2:71479563-71479582 Msa0422340:CDS 55.0%
AAAATCGAGGGAGCTGGGGA+AGG + chr3_2:71479569-71479588 Msa0422340:CDS 55.0%
!! CGCGGACAATGCTGATTCCT+TGG + chr3_2:71479907-71479926 Msa0422340:CDS 55.0%
GAGGACATGGCGCTGTTAGA+TGG - chr3_2:71480151-71480170 None:intergenic 55.0%
! GTCAACGTTCTTACCGGCTG+AGG + chr3_2:71482207-71482226 Msa0422340:intron 55.0%
!! GCGACGCCGATTTCTGACTC+CGG + chr3_2:71476811-71476830 Msa0422340:CDS 60.0%
AACGGCTGATGGAGCTCACG+AGG + chr3_2:71479183-71479202 Msa0422340:CDS 60.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 71476689 71482272 71476689 ID=Msa0422340;Name=Msa0422340
chr3_2 mRNA 71476689 71482272 71476689 ID=Msa0422340-mRNA-1;Parent=Msa0422340;Name=Msa0422340-mRNA-1;_AED=0.03;_eAED=0.03;_QI=119|1|1|1|0.83|0.71|7|288|1194
chr3_2 exon 71476689 71476916 71476689 ID=Msa0422340-mRNA-1:exon:17443;Parent=Msa0422340-mRNA-1
chr3_2 exon 71477009 71477076 71477009 ID=Msa0422340-mRNA-1:exon:17444;Parent=Msa0422340-mRNA-1
chr3_2 exon 71477168 71479223 71477168 ID=Msa0422340-mRNA-1:exon:17445;Parent=Msa0422340-mRNA-1
chr3_2 exon 71479354 71480526 71479354 ID=Msa0422340-mRNA-1:exon:17446;Parent=Msa0422340-mRNA-1
chr3_2 exon 71481063 71481117 71481063 ID=Msa0422340-mRNA-1:exon:17447;Parent=Msa0422340-mRNA-1
chr3_2 exon 71481837 71482221 71481837 ID=Msa0422340-mRNA-1:exon:17448;Parent=Msa0422340-mRNA-1
chr3_2 exon 71482246 71482272 71482246 ID=Msa0422340-mRNA-1:exon:17449;Parent=Msa0422340-mRNA-1
chr3_2 five_prime_UTR 71476689 71476807 71476689 ID=Msa0422340-mRNA-1:five_prime_utr;Parent=Msa0422340-mRNA-1
chr3_2 CDS 71476808 71476916 71476808 ID=Msa0422340-mRNA-1:cds;Parent=Msa0422340-mRNA-1
chr3_2 CDS 71477009 71477076 71477009 ID=Msa0422340-mRNA-1:cds;Parent=Msa0422340-mRNA-1
chr3_2 CDS 71477168 71479223 71477168 ID=Msa0422340-mRNA-1:cds;Parent=Msa0422340-mRNA-1
chr3_2 CDS 71479354 71480526 71479354 ID=Msa0422340-mRNA-1:cds;Parent=Msa0422340-mRNA-1
chr3_2 CDS 71481063 71481117 71481063 ID=Msa0422340-mRNA-1:cds;Parent=Msa0422340-mRNA-1
chr3_2 CDS 71481837 71481960 71481837 ID=Msa0422340-mRNA-1:cds;Parent=Msa0422340-mRNA-1
chr3_2 three_prime_UTR 71481961 71482221 71481961 ID=Msa0422340-mRNA-1:three_prime_utr;Parent=Msa0422340-mRNA-1
chr3_2 three_prime_UTR 71482246 71482272 71482246 ID=Msa0422340-mRNA-1:three_prime_utr;Parent=Msa0422340-mRNA-1
Gene Sequence

>Msa0422340

ATGGCGACGCCGATTTCTGACTCCGGTACCGTCGTCTTCATCGATACAAACCTCGATACTCACTTGGCTCTCACCGTCTCCGATCACGATACCGTCTCCGACCTCAAAAAGGTAATCGTTTCTGAACATCTTTCATGCTTTCCCAAAATCGGACAAATACAGATTCATGGCATTAAGGTTAAACGTAATGGCCACTTTTATCACTTATCTGATTCAATGGTTGTGAGAAGTGCTTTTATTGGTGTCAACAAAAGCTGGTTTCTTAGTGTTGATGTTTCTGCATTGGAAGATTCTAGACCGAATGAAAAATTGTTACCTCATGGTTCACTTCGTCAGGTGGAATCTATTGGCATTGTGAATAATGCTTTAGTTGGTTCTGGTGGCGATAATAATGGGATTATTTTGCCTTGTGATTCCCAGTTGCAATTGTTGAAGAATAAGAAAGATAAGAGGGAAGGTGTTCGTGTTGTTAGCCCTTGTGTTTCTGAACATACTGCTAAAGGAGGTGTCGCGAATATGGAGAATGGTGTCAAATTACTGGGTGATAATGATACGGCGATTCCATTGCTTGGTTCAAACTCCAAGACAGATTTTCGTAGACGTTTGAATAAAGAAGCTCCAAGTTTACCTATGGAATGTGAAGTAGATGGGCTTGATAAAGGAAATAAAGATGATGATAATGTGGGTGTGGAAGAATCTTCAATGTCTGTGCAGAGTGGGAAGAGAAAACGGAAGAGTAAGAGGAAAAGAGAAGAAACCCCTTCTGATCGTCTGCGTGTTGCAGAGCAAAATGAAAAGGATGCTGTCAAAAATTCGGAGATGGTTCCAAGTTTAAATATTGAATGTGAAGTAGATGGACCTGGTGGAGGAAATAAGGATGATCATAATGTGTGTGAAGAACCACCTTCAATATCAGTGCCAAGTGCAAAGAGAAGAAAGAAGAGTACAAAGAAAAAAGAAGCCACTGTGGTAGGGGATAGATCAAAAGAAGGAATCCCTTCTGATCACCCACGTGTTTCAGAGCACACTGAAAAAGAAGCTGTGAAAAATTTAGAGGTGGTTCCAAGTTTACATATTGAATGTGAAGTAGATGGATCCAGTGAAAGAAATAAGGATGATCGTAATGTGTGTGAAGAAGCACCTTCAATATCTGTGCCAAGTGCAAAGAGAAAAAGCAAGAGTAAAAAGAATAAGAAAAACACTGTGGGAGGTGATAATTCGAAAGATAACATTGCTGCTGTTGATAATCCTGTCGATTGTCCATCCGAAAGGACATCCAGTTTCAATGATTTTCAGGTACCTCAATCAAGGAACAAACAGGATGACAAAGAAGTCCCTTTTGACCGCCCACTTGTTTCACGTAACACTGAAAAAGAAGCTATAAAGAATTTGGAGATGGTTCCAAATTCACATATTGAATGTGAGGTAGATGAATCCAATAAAGGCACTAAGGATGACTCTATTGTATGTGAGGAAGGAACTTCTGAACCCGCACCAAGTGCAAAGAAAAAGAAGAAGAGTAAGAGTAAAAAGAAAAAAAAAGACACTGTGGGAGGTGATATCTCAAAAGACAACATTGTTTCTGTTGATAATCCTCTCGACTGTCCATCTGAAAGGGCATCCAGTTTCAACAATTTTCAGGTGTCTCAATCAAAGAATAAAAAAGATGAAAAAGAAGGAATCCTTTTTGATCGCCCATGTGTTCCAGAGCACACAGAAAAAGCTGTCACACATTTGGAGATGGTTCCAAATTCACATACTCAATGTGAGGTAGATGGATCTGATAAAGGCATTAAGGGTGACTCTATTGTATGCGAGAAAGGAACTTCTAAATCCGTACAAAGTGCAAAGAAGAAGCATAAGAGTGTAAGGAAAAAAGAAGACACAGTCCGAGATGACACTTTGAAAGAAAGCGACGCTTCTGTTGTTGTACCAGTTAAGCGGAATATTGTCCGAGCCATCTTTGCAGAGAATGCAGATAAAGAAGTAATTAAGGCAACTGAAGTTTTGAAGGAGAACAATGAAAGCAACGATAATAACACTGCGAACGAGGTTAATGCTGTGACAATGAAGGAGGCCTCAGAACTCAAATCTCCTCTAAAGAAGAAGCCTAAGAAAAGGAAGAGATCTCCGACTCATAATTCTATAGAACCTTTGAAGGGAGATACATCATCTCAAAAGGATGAAGCACAAACGGCTGATGGAGCTCACGAGGAAAGGAAAGAATCAGAAGATATCATCATTAACAAAACGAATCTTGACAAAATGGAGATTGGAGCGGTTGCATACAAAGAAAGCATACAGTCTCCAACAAAAGAAACAGGAAATAATAATAAACAAGGTGATATTGAAATGGAAGTACAGCCTTCAGATGTGAATGAGCCCAAGGATCTGATGAAGGATAACGAGAATGTTGTCGGTAGTCATTGTCATGAAAGTGAAGCTGGTAAAATCGAGGGAGCTGGGGAAGGAGAAGTGTCACCACAAAATGACGACGTGAATAGAATGAAGGAACCTGTAAAACCAGCAAAGGAACATAAGGGGGTAAAAAAAGGTAAGAATAAAGGCGGAGGACATACACTTAGAGCAGATAATGGTCTTGTGGATGCTTCTGAGAGTGAAACTGTTGTTGCGAAGTCTCTTAAAGAAACCGTTTGTGATCCTCCGGAAAATGCTGCAACACAGGGAAGTCTTCTAAATCAAACTGAAGAGGAAGGGATGGTAATGTTGCAGGGGGAAATACAAGGGACTGTTCTTTCTGTGACTGATAAGGGAAGTGATTTTAGCGCGGACAATGCTGATTCCTTGGAGCAAACTAAAACAACATCTAATGCTGAAAATGTGGATGAACTTGTAAGTAAGAGACTGGAAAAGAAACCAAACAACAAACAATCTTCTACCTCAAAGAGCACATCAGATATGCTCACAAATGGTCATGTTTTTGATAGTAAGAAAGAGCGCGATGTACACAGGATTGATAAGGCACCAAATGCACACAAGACTCGACAAGCTACAAAATTTTCTAGTCCATCTAACAGCGCCATGTCCTCAATTGTTGAAAATCGAAAATATCGCAACAATGCTTCTGGGAAAAGTATGGATTTGGATAAACAAAGGGAACACATTCCTATTTCAACTGCAAAGCTTGAAGGTTCCAACAAAATGGTTCAAAATAAAGCAAGAAAAGCTTCTGGAAATCATGTCATGGAAGTTGTGAGTAAATCACAGCAGAAGAAAAGCTTGTTAGAGGGAGCAATTTTCAAGGATGATAGTAGCAGTTCCTCTGAAGATGAAGGTCAAGAGAAGGTTGATAATTCTGATGCCAGCACTAGAACTCCATCTGACAATTCACACGCATACTATTTAGACGGGAATGACAGTCCAGGTGTCGATTCACGACAAAATGGTTCTTATGATGGGAAAAGATTGGAAAATGATGAAAGAAGTCCCTTCAAAGCAAGTTTGTCAGGCACAGCAAAAATGTCAATTGATGATGTTGTTAGAAGGTCAACAAGGTATAAGCAAGCCAGAATGACAACCTCTCAATTGGATGATACTGAAGTTCAAGAGAGTGAGGGCCTCTGA
Protein sequence

>Msa0422340

MATPISDSGTVVFIDTNLDTHLALTVSDHDTVSDLKKVIVSEHLSCFPKIGQIQIHGIKVKRNGHFYHLSDSMVVRSAFIGVNKSWFLSVDVSALEDSRPNEKLLPHGSLRQVESIGIVNNALVGSGGDNNGIILPCDSQLQLLKNKKDKREGVRVVSPCVSEHTAKGGVANMENGVKLLGDNDTAIPLLGSNSKTDFRRRLNKEAPSLPMECEVDGLDKGNKDDDNVGVEESSMSVQSGKRKRKSKRKREETPSDRLRVAEQNEKDAVKNSEMVPSLNIECEVDGPGGGNKDDHNVCEEPPSISVPSAKRRKKSTKKKEATVVGDRSKEGIPSDHPRVSEHTEKEAVKNLEVVPSLHIECEVDGSSERNKDDRNVCEEAPSISVPSAKRKSKSKKNKKNTVGGDNSKDNIAAVDNPVDCPSERTSSFNDFQVPQSRNKQDDKEVPFDRPLVSRNTEKEAIKNLEMVPNSHIECEVDESNKGTKDDSIVCEEGTSEPAPSAKKKKKSKSKKKKKDTVGGDISKDNIVSVDNPLDCPSERASSFNNFQVSQSKNKKDEKEGILFDRPCVPEHTEKAVTHLEMVPNSHTQCEVDGSDKGIKGDSIVCEKGTSKSVQSAKKKHKSVRKKEDTVRDDTLKESDASVVVPVKRNIVRAIFAENADKEVIKATEVLKENNESNDNNTANEVNAVTMKEASELKSPLKKKPKKRKRSPTHNSIEPLKGDTSSQKDEAQTADGAHEERKESEDIIINKTNLDKMEIGAVAYKESIQSPTKETGNNNKQGDIEMEVQPSDVNEPKDLMKDNENVVGSHCHESEAGKIEGAGEGEVSPQNDDVNRMKEPVKPAKEHKGVKKGKNKGGGHTLRADNGLVDASESETVVAKSLKETVCDPPENAATQGSLLNQTEEEGMVMLQGEIQGTVLSVTDKGSDFSADNADSLEQTKTTSNAENVDELVSKRLEKKPNNKQSSTSKSTSDMLTNGHVFDSKKERDVHRIDKAPNAHKTRQATKFSSPSNSAMSSIVENRKYRNNASGKSMDLDKQREHIPISTAKLEGSNKMVQNKARKASGNHVMEVVSKSQQKKSLLEGAIFKDDSSSSSEDEGQEKVDNSDASTRTPSDNSHAYYLDGNDSPGVDSRQNGSYDGKRLENDERSPFKASLSGTAKMSIDDVVRRSTRYKQARMTTSQLDDTEVQESEGL*