AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1080820


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1080820 MtrunA17_Chr7g0267551 94.218 294 17 0 1 294 1 294 0.0 530
Msa1080820 MtrunA17_Chr1g0177121 70.175 285 72 2 1 272 1 285 4.49e-146 412
Msa1080820 MtrunA17_Chr1g0177131 58.909 275 106 1 7 274 17 291 3.59e-116 337
Msa1080820 MtrunA17_Chr4g0048121 60.324 247 98 0 28 274 34 280 1.28e-109 320
Msa1080820 MtrunA17_Chr2g0281201 57.490 247 105 0 45 291 4 250 1.27e-108 315
Msa1080820 MtrunA17_Chr5g0398891 49.383 243 122 1 31 272 54 296 2.08e-83 253
Msa1080820 MtrunA17_Chr6g0461261 47.368 247 130 0 28 274 34 280 2.57e-77 238
Msa1080820 MtrunA17_Chr2g0322801 42.449 245 141 0 28 272 39 283 1.25e-64 205
Msa1080820 MtrunA17_Chr5g0404401 41.502 253 136 3 24 273 35 278 8.94e-58 187
Msa1080820 MtrunA17_Chr8g0370611 44.318 88 47 1 24 109 35 122 3.94e-14 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1080820 AT3G11820.1 66.023 259 87 1 15 272 30 288 2.57e-123 356
Msa1080820 AT3G11820.2 68.571 245 77 0 28 272 13 257 6.01e-123 354
Msa1080820 AT1G61290.1 53.584 293 131 1 1 288 1 293 4.35e-114 331
Msa1080820 AT1G61290.2 53.584 293 131 1 1 288 1 293 4.35e-114 331
Msa1080820 AT1G11250.1 56.522 276 116 2 1 274 1 274 1.20e-110 322
Msa1080820 AT3G52400.1 58.131 289 106 3 1 274 1 289 2.31e-108 318
Msa1080820 AT4G03330.1 52.492 301 131 3 1 291 1 299 8.57e-102 300
Msa1080820 AT3G03800.2 43.011 279 152 2 1 272 1 279 2.70e-72 225
Msa1080820 AT3G03800.1 43.011 279 152 2 1 272 1 279 2.70e-72 225
Msa1080820 AT1G08560.1 43.077 260 142 3 15 272 31 286 5.94e-70 219
Msa1080820 AT5G08080.1 48.425 254 131 0 19 272 25 278 1.51e-69 218
Msa1080820 AT5G08080.4 48.425 254 131 0 19 272 25 278 1.51e-69 218
Msa1080820 AT5G08080.3 46.038 265 132 2 19 272 25 289 1.17e-66 211
Msa1080820 AT2G18260.2 36.667 270 164 2 21 290 40 302 2.11e-56 184
Msa1080820 AT2G18260.1 36.667 270 164 2 21 290 40 302 2.11e-56 184
Msa1080820 AT5G08080.5 46.023 176 95 0 19 194 25 200 7.27e-38 134
Msa1080820 AT5G08080.2 46.023 176 95 0 19 194 25 200 7.27e-38 134

Find 82 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAGCTTCATCAAGTGTTTC+TGG 0.159765 7_2:+80536851 Msa1080820:CDS
CGGAGATACTTTGCTGTTAA+TGG 0.175180 7_2:+80535758 Msa1080820:CDS
ATCAAAAGAATACCCGTAAA+TGG 0.262883 7_2:+80536991 Msa1080820:CDS
GTTTCTGGACATGGCAGTTT+TGG 0.265868 7_2:+80536866 Msa1080820:CDS
TAATTAATTAGTTCTCAAAA+TGG 0.299398 7_2:+80537100 Msa1080820:three_prime_UTR
AATAATTAGGAATAGTAAAA+TGG 0.321065 7_2:-80537024 None:intergenic
TGGCAAAACATGTCCATTTA+CGG 0.321225 7_2:-80537004 None:intergenic
TCAATTCTTCACCTTGGGCT+TGG 0.323182 7_2:-80536890 None:intergenic
ACGAATTTGCTCGCATCATT+TGG 0.333506 7_2:-80536926 None:intergenic
GAAGAAAGCAAGATTCATTA+AGG 0.337950 7_2:+80535547 Msa1080820:CDS
TTATAACCAAAGCAATAATT+AGG 0.340259 7_2:-80537037 None:intergenic
CGGTGGAGGTTCCCGCCATC+TGG 0.342807 7_2:-80535343 None:intergenic
GTCATTCAATTCTTCACCTT+GGG 0.347976 7_2:-80536895 None:intergenic
TGCGAGCAAATTCGTATGTT+AGG 0.368696 7_2:+80536934 Msa1080820:CDS
CTGTTGCTCTCCCTTGCTCT+TGG 0.369883 7_2:-80536761 None:intergenic
ACTATTCCTAATTATTGCTT+TGG 0.374173 7_2:+80537031 Msa1080820:CDS
GAAGAATTTGAAAGATTCAA+TGG 0.398160 7_2:+80535679 Msa1080820:CDS
TGCTCTCCCTTGCTCTTGGA+TGG 0.409592 7_2:-80536757 None:intergenic
GGCAAAACATGTCCATTTAC+GGG 0.415302 7_2:-80537003 None:intergenic
GAGTTTGCCTGATTGTGGAC+CGG 0.420074 7_2:+80535610 Msa1080820:CDS
TTGTGGACCGGGTTCATCTT+CGG 0.423936 7_2:+80535622 Msa1080820:CDS
ACACGGTTGGCGGTGGTGAG+TGG 0.436352 7_2:+80535650 Msa1080820:CDS
TCACCGCTTGAGCGCTGTGT+AGG 0.436687 7_2:-80535481 None:intergenic
GCGAGCAAATTCGTATGTTA+GGG 0.437494 7_2:+80536935 Msa1080820:CDS
GATGAACCCGGTCCACAATC+AGG 0.439006 7_2:-80535617 None:intergenic
TGGCGGTGGTGAGTGGGTTG+AGG 0.460203 7_2:+80535657 Msa1080820:CDS
CAAAATGGTGGCTGCTGTGA+AGG 0.468469 7_2:+80537115 Msa1080820:three_prime_UTR
TGCGGTTGGAGTCGCTTGAC+CGG 0.475517 7_2:+80535570 Msa1080820:CDS
AGCCGGAGTTTGCCTGATTG+TGG 0.475796 7_2:+80535605 Msa1080820:CDS
GAAGGAGCTTCGTTCTGCTA+TGG 0.477536 7_2:+80535502 Msa1080820:CDS
GGTTTGCGCCGGTGCGGTGG+AGG 0.478958 7_2:-80535357 None:intergenic
TCCGGCTCGCTTCGTTAGAC+CGG 0.489876 7_2:-80535589 None:intergenic
AGTATAAAGAGACGGTGAAA+CGG 0.492429 7_2:+80535738 Msa1080820:CDS
CACGGTTGGCGGTGGTGAGT+GGG 0.493974 7_2:+80535651 Msa1080820:CDS
CACCGCTTGAGCGCTGTGTA+GGG 0.497930 7_2:-80535480 None:intergenic
AGTTTGCCTGATTGTGGACC+GGG 0.499061 7_2:+80535611 Msa1080820:CDS
TAGGGTTTGCGCCGGTGCGG+TGG 0.506685 7_2:-80535360 None:intergenic
TGTCATTCAATTCTTCACCT+TGG 0.506888 7_2:-80536896 None:intergenic
ATGTACATCAAACAGTAGTA+AGG 0.507905 7_2:-80537320 None:intergenic
TTCGGATCGAACACGGTTGG+CGG 0.516136 7_2:+80535640 Msa1080820:CDS
CTTTGCTGTTAATGGAGAGA+AGG 0.520933 7_2:+80535766 Msa1080820:CDS
GCAAGGGAGAGCAACAGTGA+TGG 0.529764 7_2:+80536767 Msa1080820:CDS
ACACAGCGCTCAAGCGGTGA+AGG 0.532522 7_2:+80535484 Msa1080820:CDS
TCATCAAGTGTTTCTGGACA+TGG 0.537223 7_2:+80536857 Msa1080820:CDS
ATCAAACATTAATCAAAACT+TGG 0.539557 7_2:+80537152 Msa1080820:three_prime_UTR
GGATCGAACACGGTTGGCGG+TGG 0.540587 7_2:+80535643 Msa1080820:CDS
GTTGACCTCCTCATCTCTAC+TGG 0.541903 7_2:+80535803 Msa1080820:CDS
TTAATTAGTTCTCAAAATGG+TGG 0.543135 7_2:+80537103 Msa1080820:three_prime_UTR
GGCGGGAACCTCCACCGCAC+CGG 0.544215 7_2:+80535349 Msa1080820:CDS
ATCTTCGGATCGAACACGGT+TGG 0.547585 7_2:+80535637 Msa1080820:CDS
CACCACATCATCCAGATGGC+GGG 0.553836 7_2:+80535332 Msa1080820:CDS
GTCCACAATCAGGCAAACTC+CGG 0.555904 7_2:-80535607 None:intergenic
AACCCTACACAGCGCTCAAG+CGG 0.557100 7_2:+80535478 Msa1080820:CDS
TACAACAATTACATGTTGCT+AGG 0.558042 7_2:+80536964 Msa1080820:CDS
ACCGGTCTAACGAAGCGAGC+CGG 0.561733 7_2:+80535588 Msa1080820:CDS
AAGATTCATTAAGGTGCGGT+TGG 0.569901 7_2:+80535556 Msa1080820:CDS
CAGAAAGCCATCCAAGAGCA+AGG 0.580650 7_2:+80536750 Msa1080820:CDS
TGTATAAAGATGAATATGAA+AGG 0.583157 7_2:-80537235 None:intergenic
GTTCGATCCGAAGATGAACC+CGG 0.588540 7_2:-80535629 None:intergenic
CCATCTGGATGATGTGGTGG+TGG 0.591631 7_2:-80535328 None:intergenic
GTTCATCTTCGGATCGAACA+CGG 0.592605 7_2:+80535633 Msa1080820:CDS
TTCTAGGGTTTGCGCCGGTG+CGG 0.607568 7_2:-80535363 None:intergenic
CCGCCATCTGGATGATGTGG+TGG 0.620414 7_2:-80535331 None:intergenic
GAATACCAGTAGAGATGAGG+AGG 0.622119 7_2:-80535808 None:intergenic
TTCCCGCCATCTGGATGATG+TGG 0.622342 7_2:-80535334 None:intergenic
CTTCAGAGAGATAGTAACGT+CGG 0.627845 7_2:-80535528 None:intergenic
CAAGAGATTGAAGAGAGACA+TGG 0.631024 7_2:+80536798 Msa1080820:CDS
TATGAATACCAGTAGAGATG+AGG 0.631967 7_2:-80535811 None:intergenic
ATGCTAGTACAATATAGTGA+AGG 0.633779 7_2:-80537203 None:intergenic
CCACCACCACATCATCCAGA+TGG 0.634703 7_2:+80535328 Msa1080820:CDS
AGTAGAGATGAGGAGGTCAA+CGG 0.635845 7_2:-80535801 None:intergenic
AGAAAGCCATCCAAGAGCAA+GGG 0.638028 7_2:+80536751 Msa1080820:CDS
GTACAATATAGTGAAGGCGG+CGG 0.639525 7_2:-80537197 None:intergenic
GTGGTGGTGGTTGTTATCGA+CGG 0.640688 7_2:-80535315 None:intergenic
CCACCACATCATCCAGATGG+CGG 0.642903 7_2:+80535331 Msa1080820:CDS
AAGCAAGATTCATTAAGGTG+CGG 0.653735 7_2:+80535552 Msa1080820:CDS
GCAAATTCGTATGTTAGGGG+AGG 0.655353 7_2:+80536939 Msa1080820:CDS
TCAAACACTCAAAACGCGAA+CGG 0.662229 7_2:+80535259 None:intergenic
ATCGTCGGAGTATAAAGAGA+CGG 0.662950 7_2:+80535730 Msa1080820:CDS
CTAGTACAATATAGTGAAGG+CGG 0.665769 7_2:-80537200 None:intergenic
ACTAAGGGAGCAGATATCGT+CGG 0.671880 7_2:+80535715 Msa1080820:CDS
CGAGCAAATTCGTATGTTAG+GGG 0.697718 7_2:+80536936 Msa1080820:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAAATAGAAAAACAATA+CGG - chr7_2:80536631-80536650 None:intergenic 10.0%
!!! TGTTTTAAAAAATAATTAGT+TGG + chr7_2:80537070-80537089 Msa1080820:exon 10.0%
!!! GTTTTAAAAAATAATTAGTT+GGG + chr7_2:80537071-80537090 Msa1080820:exon 10.0%
!!! TTTTTATTTTATATTAGTTG+TGG + chr7_2:80537274-80537293 Msa1080820:three_prime_UTR 10.0%
!! ATATAAATAGAAAAACAATA+CGG - chr7_2:80536631-80536650 None:intergenic 10.0%
!!! TGTTTTAAAAAATAATTAGT+TGG + chr7_2:80537070-80537089 Msa1080820:exon 10.0%
!!! GTTTTAAAAAATAATTAGTT+GGG + chr7_2:80537071-80537090 Msa1080820:exon 10.0%
!!! TTTTTATTTTATATTAGTTG+TGG + chr7_2:80537274-80537293 Msa1080820:three_prime_UTR 10.0%
!! TGAAATACTAAAATTAACTT+TGG + chr7_2:80535905-80535924 Msa1080820:intron 15.0%
!!! TTTTGTATATACAAAGTTTT+AGG - chr7_2:80536345-80536364 None:intergenic 15.0%
!!! TATTTAACTTCTTCTTTTTA+GGG - chr7_2:80536515-80536534 None:intergenic 15.0%
!!! TTATTTAACTTCTTCTTTTT+AGG - chr7_2:80536516-80536535 None:intergenic 15.0%
!! AATAATTAGGAATAGTAAAA+TGG - chr7_2:80537027-80537046 None:intergenic 15.0%
!!! TAATTAATTAGTTCTCAAAA+TGG + chr7_2:80537100-80537119 Msa1080820:three_prime_UTR 15.0%
!! TGAAATACTAAAATTAACTT+TGG + chr7_2:80535905-80535924 Msa1080820:intron 15.0%
!!! TTTTGTATATACAAAGTTTT+AGG - chr7_2:80536345-80536364 None:intergenic 15.0%
!!! TATTTAACTTCTTCTTTTTA+GGG - chr7_2:80536515-80536534 None:intergenic 15.0%
!!! TTATTTAACTTCTTCTTTTT+AGG - chr7_2:80536516-80536535 None:intergenic 15.0%
!! AATAATTAGGAATAGTAAAA+TGG - chr7_2:80537027-80537046 None:intergenic 15.0%
!!! TAATTAATTAGTTCTCAAAA+TGG + chr7_2:80537100-80537119 Msa1080820:three_prime_UTR 15.0%
!! ATCTTCATAATTAATTGAGT+TGG + chr7_2:80535969-80535988 Msa1080820:intron 20.0%
!!! TTGCTACTTATTGTTAATAT+TGG + chr7_2:80536076-80536095 Msa1080820:intron 20.0%
!! TTATATTTAGTTGTTCCTTA+CGG + chr7_2:80536382-80536401 Msa1080820:intron 20.0%
!!! TAGTGTTTTAATATCATGTA+CGG - chr7_2:80536429-80536448 None:intergenic 20.0%
!! TCATCTCTTAAAAGTTAAAT+AGG + chr7_2:80536486-80536505 Msa1080820:intron 20.0%
!!! ATTTAACTTCTTCTTTTTAG+GGG - chr7_2:80536514-80536533 None:intergenic 20.0%
!! AAGTTGTATTAATACTATGA+TGG + chr7_2:80536699-80536718 Msa1080820:intron 20.0%
!! TTATAACCAAAGCAATAATT+AGG - chr7_2:80537040-80537059 None:intergenic 20.0%
!!! TATTTTTTAAAACAATAGGG+AGG - chr7_2:80537064-80537083 None:intergenic 20.0%
!! ATCAAACATTAATCAAAACT+TGG + chr7_2:80537152-80537171 Msa1080820:three_prime_UTR 20.0%
!! TGTATAAAGATGAATATGAA+AGG - chr7_2:80537238-80537257 None:intergenic 20.0%
!! ATCTTCATAATTAATTGAGT+TGG + chr7_2:80535969-80535988 Msa1080820:intron 20.0%
!!! TTGCTACTTATTGTTAATAT+TGG + chr7_2:80536076-80536095 Msa1080820:intron 20.0%
!! TTATATTTAGTTGTTCCTTA+CGG + chr7_2:80536382-80536401 Msa1080820:intron 20.0%
!!! TAGTGTTTTAATATCATGTA+CGG - chr7_2:80536429-80536448 None:intergenic 20.0%
!! TCATCTCTTAAAAGTTAAAT+AGG + chr7_2:80536486-80536505 Msa1080820:intron 20.0%
!!! ATTTAACTTCTTCTTTTTAG+GGG - chr7_2:80536514-80536533 None:intergenic 20.0%
!! AAGTTGTATTAATACTATGA+TGG + chr7_2:80536699-80536718 Msa1080820:intron 20.0%
!! TTATAACCAAAGCAATAATT+AGG - chr7_2:80537040-80537059 None:intergenic 20.0%
!!! TATTTTTTAAAACAATAGGG+AGG - chr7_2:80537064-80537083 None:intergenic 20.0%
!! ATCAAACATTAATCAAAACT+TGG + chr7_2:80537152-80537171 Msa1080820:three_prime_UTR 20.0%
!! TGTATAAAGATGAATATGAA+AGG - chr7_2:80537238-80537257 None:intergenic 20.0%
!! TTCTTGGAAGAATTTTTCTA+GGG - chr7_2:80535381-80535400 None:intergenic 25.0%
! GAAGAATTTGAAAGATTCAA+TGG + chr7_2:80535679-80535698 Msa1080820:CDS 25.0%
!!! AATTAATTGAGTTGGAATCT+AGG + chr7_2:80535977-80535996 Msa1080820:intron 25.0%
!!! ATTAATTGAGTTGGAATCTA+GGG + chr7_2:80535978-80535997 Msa1080820:intron 25.0%
!!! TAGTTTTTTTTTCTTTGCCA+GGG - chr7_2:80536053-80536072 None:intergenic 25.0%
!!! TTAGTTTTTTTTTCTTTGCC+AGG - chr7_2:80536054-80536073 None:intergenic 25.0%
!!! ATATACAAAGTTTTAGGTCA+AGG - chr7_2:80536339-80536358 None:intergenic 25.0%
! TTGTTTGCTTATTACGTTAA+TGG + chr7_2:80536567-80536586 Msa1080820:intron 25.0%
! TTGTATTAATACTATGATGG+TGG + chr7_2:80536702-80536721 Msa1080820:intron 25.0%
! ACTATTCCTAATTATTGCTT+TGG + chr7_2:80537031-80537050 Msa1080820:CDS 25.0%
!! TTAATTAGTTCTCAAAATGG+TGG + chr7_2:80537103-80537122 Msa1080820:three_prime_UTR 25.0%
!! TTCTTGGAAGAATTTTTCTA+GGG - chr7_2:80535381-80535400 None:intergenic 25.0%
! GAAGAATTTGAAAGATTCAA+TGG + chr7_2:80535679-80535698 Msa1080820:CDS 25.0%
!!! AATTAATTGAGTTGGAATCT+AGG + chr7_2:80535977-80535996 Msa1080820:intron 25.0%
!!! ATTAATTGAGTTGGAATCTA+GGG + chr7_2:80535978-80535997 Msa1080820:intron 25.0%
!!! TAGTTTTTTTTTCTTTGCCA+GGG - chr7_2:80536053-80536072 None:intergenic 25.0%
!!! TTAGTTTTTTTTTCTTTGCC+AGG - chr7_2:80536054-80536073 None:intergenic 25.0%
!!! ATATACAAAGTTTTAGGTCA+AGG - chr7_2:80536339-80536358 None:intergenic 25.0%
! TTGTTTGCTTATTACGTTAA+TGG + chr7_2:80536567-80536586 Msa1080820:intron 25.0%
! TTGTATTAATACTATGATGG+TGG + chr7_2:80536702-80536721 Msa1080820:intron 25.0%
! ACTATTCCTAATTATTGCTT+TGG + chr7_2:80537031-80537050 Msa1080820:CDS 25.0%
!! TTAATTAGTTCTCAAAATGG+TGG + chr7_2:80537103-80537122 Msa1080820:three_prime_UTR 25.0%
! CTTCTTGGAAGAATTTTTCT+AGG - chr7_2:80535382-80535401 None:intergenic 30.0%
AGAAAAATTCTTCCAAGAAG+TGG + chr7_2:80535382-80535401 Msa1080820:CDS 30.0%
GAAGAAAGCAAGATTCATTA+AGG + chr7_2:80535547-80535566 Msa1080820:CDS 30.0%
!! GATTCAATGGAGAGTTTTAA+TGG + chr7_2:80535692-80535711 Msa1080820:CDS 30.0%
TCTACTAGAAATCCAACATA+TGG - chr7_2:80536161-80536180 None:intergenic 30.0%
!! ATATGTTGGATTTCTAGTAG+AGG + chr7_2:80536160-80536179 Msa1080820:intron 30.0%
AAACAATACGGTGATTGTTA+CGG - chr7_2:80536619-80536638 None:intergenic 30.0%
AGAAAAGAGAAATTACGTAG+AGG - chr7_2:80536664-80536683 None:intergenic 30.0%
AATACAACTTTCCATGCATT+AGG - chr7_2:80536689-80536708 None:intergenic 30.0%
TACAACAATTACATGTTGCT+AGG + chr7_2:80536964-80536983 Msa1080820:CDS 30.0%
ATCAAAAGAATACCCGTAAA+TGG + chr7_2:80536991-80537010 Msa1080820:CDS 30.0%
ATGCTAGTACAATATAGTGA+AGG - chr7_2:80537206-80537225 None:intergenic 30.0%
ATGTACATCAAACAGTAGTA+AGG - chr7_2:80537323-80537342 None:intergenic 30.0%
! CTTCTTGGAAGAATTTTTCT+AGG - chr7_2:80535382-80535401 None:intergenic 30.0%
AGAAAAATTCTTCCAAGAAG+TGG + chr7_2:80535382-80535401 Msa1080820:CDS 30.0%
GAAGAAAGCAAGATTCATTA+AGG + chr7_2:80535547-80535566 Msa1080820:CDS 30.0%
!! GATTCAATGGAGAGTTTTAA+TGG + chr7_2:80535692-80535711 Msa1080820:CDS 30.0%
TCTACTAGAAATCCAACATA+TGG - chr7_2:80536161-80536180 None:intergenic 30.0%
!! ATATGTTGGATTTCTAGTAG+AGG + chr7_2:80536160-80536179 Msa1080820:intron 30.0%
AAACAATACGGTGATTGTTA+CGG - chr7_2:80536619-80536638 None:intergenic 30.0%
AGAAAAGAGAAATTACGTAG+AGG - chr7_2:80536664-80536683 None:intergenic 30.0%
AATACAACTTTCCATGCATT+AGG - chr7_2:80536689-80536708 None:intergenic 30.0%
TACAACAATTACATGTTGCT+AGG + chr7_2:80536964-80536983 Msa1080820:CDS 30.0%
ATCAAAAGAATACCCGTAAA+TGG + chr7_2:80536991-80537010 Msa1080820:CDS 30.0%
ATGCTAGTACAATATAGTGA+AGG - chr7_2:80537206-80537225 None:intergenic 30.0%
ATGTACATCAAACAGTAGTA+AGG - chr7_2:80537323-80537342 None:intergenic 30.0%
! TCTTTTCGTGTGAGTTTTTG+AGG - chr7_2:80535454-80535473 None:intergenic 35.0%
AAGCAAGATTCATTAAGGTG+CGG + chr7_2:80535552-80535571 Msa1080820:CDS 35.0%
!!! TGGAGAGTTTTAATGGACTA+AGG + chr7_2:80535699-80535718 Msa1080820:CDS 35.0%
!!! GGAGAGTTTTAATGGACTAA+GGG + chr7_2:80535700-80535719 Msa1080820:CDS 35.0%
AGTATAAAGAGACGGTGAAA+CGG + chr7_2:80535738-80535757 Msa1080820:CDS 35.0%
TATGAATACCAGTAGAGATG+AGG - chr7_2:80535814-80535833 None:intergenic 35.0%
!! TATGGCTAGCTTGGTTAATT+TGG - chr7_2:80536143-80536162 None:intergenic 35.0%
TTTAGTTGTTCCTTACGGTT+AGG + chr7_2:80536387-80536406 Msa1080820:intron 35.0%
TTAGTTGTTCCTTACGGTTA+GGG + chr7_2:80536388-80536407 Msa1080820:intron 35.0%
! CTCTTTTCTTACCTAATGCA+TGG + chr7_2:80536675-80536694 Msa1080820:intron 35.0%
!! TAATACTATGATGGTGGATC+AGG + chr7_2:80536708-80536727 Msa1080820:intron 35.0%
GTCATTCAATTCTTCACCTT+GGG - chr7_2:80536898-80536917 None:intergenic 35.0%
TGTCATTCAATTCTTCACCT+TGG - chr7_2:80536899-80536918 None:intergenic 35.0%
TGGCAAAACATGTCCATTTA+CGG - chr7_2:80537007-80537026 None:intergenic 35.0%
CTAGTACAATATAGTGAAGG+CGG - chr7_2:80537203-80537222 None:intergenic 35.0%
! TCTTTTCGTGTGAGTTTTTG+AGG - chr7_2:80535454-80535473 None:intergenic 35.0%
AAGCAAGATTCATTAAGGTG+CGG + chr7_2:80535552-80535571 Msa1080820:CDS 35.0%
!!! TGGAGAGTTTTAATGGACTA+AGG + chr7_2:80535699-80535718 Msa1080820:CDS 35.0%
!!! GGAGAGTTTTAATGGACTAA+GGG + chr7_2:80535700-80535719 Msa1080820:CDS 35.0%
AGTATAAAGAGACGGTGAAA+CGG + chr7_2:80535738-80535757 Msa1080820:CDS 35.0%
TATGAATACCAGTAGAGATG+AGG - chr7_2:80535814-80535833 None:intergenic 35.0%
!! TATGGCTAGCTTGGTTAATT+TGG - chr7_2:80536143-80536162 None:intergenic 35.0%
TTTAGTTGTTCCTTACGGTT+AGG + chr7_2:80536387-80536406 Msa1080820:intron 35.0%
TTAGTTGTTCCTTACGGTTA+GGG + chr7_2:80536388-80536407 Msa1080820:intron 35.0%
! CTCTTTTCTTACCTAATGCA+TGG + chr7_2:80536675-80536694 Msa1080820:intron 35.0%
!! TAATACTATGATGGTGGATC+AGG + chr7_2:80536708-80536727 Msa1080820:intron 35.0%
GTCATTCAATTCTTCACCTT+GGG - chr7_2:80536898-80536917 None:intergenic 35.0%
TGTCATTCAATTCTTCACCT+TGG - chr7_2:80536899-80536918 None:intergenic 35.0%
TGGCAAAACATGTCCATTTA+CGG - chr7_2:80537007-80537026 None:intergenic 35.0%
CTAGTACAATATAGTGAAGG+CGG - chr7_2:80537203-80537222 None:intergenic 35.0%
!!! AATTTTTCTAGGGTTTGCGC+CGG - chr7_2:80535371-80535390 None:intergenic 40.0%
CTTCAGAGAGATAGTAACGT+CGG - chr7_2:80535531-80535550 None:intergenic 40.0%
AAGATTCATTAAGGTGCGGT+TGG + chr7_2:80535556-80535575 Msa1080820:CDS 40.0%
ATCGTCGGAGTATAAAGAGA+CGG + chr7_2:80535730-80535749 Msa1080820:CDS 40.0%
!! CGGAGATACTTTGCTGTTAA+TGG + chr7_2:80535758-80535777 Msa1080820:CDS 40.0%
!! CTTTGCTGTTAATGGAGAGA+AGG + chr7_2:80535766-80535785 Msa1080820:CDS 40.0%
GATGATCAAACGTTAAACCC+TGG + chr7_2:80536033-80536052 Msa1080820:intron 40.0%
TAACCAAGCTAGCCATATGT+TGG + chr7_2:80536146-80536165 Msa1080820:intron 40.0%
! AATCCAACATATGGCTAGCT+TGG - chr7_2:80536152-80536171 None:intergenic 40.0%
ACAACAACAATTCAACCGTG+TGG - chr7_2:80536272-80536291 None:intergenic 40.0%
CAAGAGATTGAAGAGAGACA+TGG + chr7_2:80536798-80536817 Msa1080820:CDS 40.0%
AGAGCTTCATCAAGTGTTTC+TGG + chr7_2:80536851-80536870 Msa1080820:CDS 40.0%
!! TCATCAAGTGTTTCTGGACA+TGG + chr7_2:80536857-80536876 Msa1080820:CDS 40.0%
! ACGAATTTGCTCGCATCATT+TGG - chr7_2:80536929-80536948 None:intergenic 40.0%
TGCGAGCAAATTCGTATGTT+AGG + chr7_2:80536934-80536953 Msa1080820:CDS 40.0%
GCGAGCAAATTCGTATGTTA+GGG + chr7_2:80536935-80536954 Msa1080820:CDS 40.0%
CGAGCAAATTCGTATGTTAG+GGG + chr7_2:80536936-80536955 Msa1080820:CDS 40.0%
GGCAAAACATGTCCATTTAC+GGG - chr7_2:80537006-80537025 None:intergenic 40.0%
!!! AATTTTTCTAGGGTTTGCGC+CGG - chr7_2:80535371-80535390 None:intergenic 40.0%
CTTCAGAGAGATAGTAACGT+CGG - chr7_2:80535531-80535550 None:intergenic 40.0%
AAGATTCATTAAGGTGCGGT+TGG + chr7_2:80535556-80535575 Msa1080820:CDS 40.0%
ATCGTCGGAGTATAAAGAGA+CGG + chr7_2:80535730-80535749 Msa1080820:CDS 40.0%
!! CGGAGATACTTTGCTGTTAA+TGG + chr7_2:80535758-80535777 Msa1080820:CDS 40.0%
!! CTTTGCTGTTAATGGAGAGA+AGG + chr7_2:80535766-80535785 Msa1080820:CDS 40.0%
GATGATCAAACGTTAAACCC+TGG + chr7_2:80536033-80536052 Msa1080820:intron 40.0%
TAACCAAGCTAGCCATATGT+TGG + chr7_2:80536146-80536165 Msa1080820:intron 40.0%
! AATCCAACATATGGCTAGCT+TGG - chr7_2:80536152-80536171 None:intergenic 40.0%
ACAACAACAATTCAACCGTG+TGG - chr7_2:80536272-80536291 None:intergenic 40.0%
CAAGAGATTGAAGAGAGACA+TGG + chr7_2:80536798-80536817 Msa1080820:CDS 40.0%
AGAGCTTCATCAAGTGTTTC+TGG + chr7_2:80536851-80536870 Msa1080820:CDS 40.0%
!! TCATCAAGTGTTTCTGGACA+TGG + chr7_2:80536857-80536876 Msa1080820:CDS 40.0%
! ACGAATTTGCTCGCATCATT+TGG - chr7_2:80536929-80536948 None:intergenic 40.0%
TGCGAGCAAATTCGTATGTT+AGG + chr7_2:80536934-80536953 Msa1080820:CDS 40.0%
GCGAGCAAATTCGTATGTTA+GGG + chr7_2:80536935-80536954 Msa1080820:CDS 40.0%
CGAGCAAATTCGTATGTTAG+GGG + chr7_2:80536936-80536955 Msa1080820:CDS 40.0%
GGCAAAACATGTCCATTTAC+GGG - chr7_2:80537006-80537025 None:intergenic 40.0%
! CTTTTAGCGACTCCACTTCT+TGG - chr7_2:80535397-80535416 None:intergenic 45.0%
!!! AGTTTTTGAGGCTTGTGTGG+AGG - chr7_2:80535442-80535461 None:intergenic 45.0%
!!! GTGAGTTTTTGAGGCTTGTG+TGG - chr7_2:80535445-80535464 None:intergenic 45.0%
GTTCATCTTCGGATCGAACA+CGG + chr7_2:80535633-80535652 Msa1080820:CDS 45.0%
ACTAAGGGAGCAGATATCGT+CGG + chr7_2:80535715-80535734 Msa1080820:CDS 45.0%
AGTAGAGATGAGGAGGTCAA+CGG - chr7_2:80535804-80535823 None:intergenic 45.0%
GAATACCAGTAGAGATGAGG+AGG - chr7_2:80535811-80535830 None:intergenic 45.0%
GTTGCTAGCTACAACAGTTG+TGG + chr7_2:80536182-80536201 Msa1080820:intron 45.0%
AGAAAGCCATCCAAGAGCAA+GGG + chr7_2:80536751-80536770 Msa1080820:CDS 45.0%
!! GTTTCTGGACATGGCAGTTT+TGG + chr7_2:80536866-80536885 Msa1080820:CDS 45.0%
TCAATTCTTCACCTTGGGCT+TGG - chr7_2:80536893-80536912 None:intergenic 45.0%
GCAAATTCGTATGTTAGGGG+AGG + chr7_2:80536939-80536958 Msa1080820:CDS 45.0%
GTACAATATAGTGAAGGCGG+CGG - chr7_2:80537200-80537219 None:intergenic 45.0%
! CTTTTAGCGACTCCACTTCT+TGG - chr7_2:80535397-80535416 None:intergenic 45.0%
!!! AGTTTTTGAGGCTTGTGTGG+AGG - chr7_2:80535442-80535461 None:intergenic 45.0%
!!! GTGAGTTTTTGAGGCTTGTG+TGG - chr7_2:80535445-80535464 None:intergenic 45.0%
GTTCATCTTCGGATCGAACA+CGG + chr7_2:80535633-80535652 Msa1080820:CDS 45.0%
ACTAAGGGAGCAGATATCGT+CGG + chr7_2:80535715-80535734 Msa1080820:CDS 45.0%
AGTAGAGATGAGGAGGTCAA+CGG - chr7_2:80535804-80535823 None:intergenic 45.0%
GAATACCAGTAGAGATGAGG+AGG - chr7_2:80535811-80535830 None:intergenic 45.0%
GTTGCTAGCTACAACAGTTG+TGG + chr7_2:80536182-80536201 Msa1080820:intron 45.0%
AGAAAGCCATCCAAGAGCAA+GGG + chr7_2:80536751-80536770 Msa1080820:CDS 45.0%
!! GTTTCTGGACATGGCAGTTT+TGG + chr7_2:80536866-80536885 Msa1080820:CDS 45.0%
TCAATTCTTCACCTTGGGCT+TGG - chr7_2:80536893-80536912 None:intergenic 45.0%
GCAAATTCGTATGTTAGGGG+AGG + chr7_2:80536939-80536958 Msa1080820:CDS 45.0%
GTACAATATAGTGAAGGCGG+CGG - chr7_2:80537200-80537219 None:intergenic 45.0%
!! ATAAAATAAAACTATAAAAT+TGG + chr7_2:80535931-80535950 Msa1080820:intron 5.0%
!!! AATTATTTTTTAAAACAATA+GGG - chr7_2:80537067-80537086 None:intergenic 5.0%
!!! TAATTATTTTTTAAAACAAT+AGG - chr7_2:80537068-80537087 None:intergenic 5.0%
!! ATAAAATAAAACTATAAAAT+TGG + chr7_2:80535931-80535950 Msa1080820:intron 5.0%
!!! AATTATTTTTTAAAACAATA+GGG - chr7_2:80537067-80537086 None:intergenic 5.0%
!!! TAATTATTTTTTAAAACAAT+AGG - chr7_2:80537068-80537087 None:intergenic 5.0%
!! GTGGTGGTGGTTGTTATCGA+CGG - chr7_2:80535318-80535337 None:intergenic 50.0%
GAAGGAGCTTCGTTCTGCTA+TGG + chr7_2:80535502-80535521 Msa1080820:CDS 50.0%
GTCCACAATCAGGCAAACTC+CGG - chr7_2:80535610-80535629 None:intergenic 50.0%
GAGTTTGCCTGATTGTGGAC+CGG + chr7_2:80535610-80535629 Msa1080820:CDS 50.0%
AGTTTGCCTGATTGTGGACC+GGG + chr7_2:80535611-80535630 Msa1080820:CDS 50.0%
TTGTGGACCGGGTTCATCTT+CGG + chr7_2:80535622-80535641 Msa1080820:CDS 50.0%
GTTCGATCCGAAGATGAACC+CGG - chr7_2:80535632-80535651 None:intergenic 50.0%
ATCTTCGGATCGAACACGGT+TGG + chr7_2:80535637-80535656 Msa1080820:CDS 50.0%
GTTGACCTCCTCATCTCTAC+TGG + chr7_2:80535803-80535822 Msa1080820:CDS 50.0%
ACAATTCAACCGTGTGGCTG+AGG - chr7_2:80536266-80536285 None:intergenic 50.0%
GATGTCACACCCTAACCGTA+AGG - chr7_2:80536400-80536419 None:intergenic 50.0%
GGTTAGGGTGTGACATCATG+TGG + chr7_2:80536403-80536422 Msa1080820:intron 50.0%
CAGAAAGCCATCCAAGAGCA+AGG + chr7_2:80536750-80536769 Msa1080820:CDS 50.0%
CAAAATGGTGGCTGCTGTGA+AGG + chr7_2:80537115-80537134 Msa1080820:three_prime_UTR 50.0%
!! GTGGTGGTGGTTGTTATCGA+CGG - chr7_2:80535318-80535337 None:intergenic 50.0%
GAAGGAGCTTCGTTCTGCTA+TGG + chr7_2:80535502-80535521 Msa1080820:CDS 50.0%
GTCCACAATCAGGCAAACTC+CGG - chr7_2:80535610-80535629 None:intergenic 50.0%
GAGTTTGCCTGATTGTGGAC+CGG + chr7_2:80535610-80535629 Msa1080820:CDS 50.0%
AGTTTGCCTGATTGTGGACC+GGG + chr7_2:80535611-80535630 Msa1080820:CDS 50.0%
TTGTGGACCGGGTTCATCTT+CGG + chr7_2:80535622-80535641 Msa1080820:CDS 50.0%
GTTCGATCCGAAGATGAACC+CGG - chr7_2:80535632-80535651 None:intergenic 50.0%
ATCTTCGGATCGAACACGGT+TGG + chr7_2:80535637-80535656 Msa1080820:CDS 50.0%
GTTGACCTCCTCATCTCTAC+TGG + chr7_2:80535803-80535822 Msa1080820:CDS 50.0%
ACAATTCAACCGTGTGGCTG+AGG - chr7_2:80536266-80536285 None:intergenic 50.0%
GATGTCACACCCTAACCGTA+AGG - chr7_2:80536400-80536419 None:intergenic 50.0%
GGTTAGGGTGTGACATCATG+TGG + chr7_2:80536403-80536422 Msa1080820:intron 50.0%
CAGAAAGCCATCCAAGAGCA+AGG + chr7_2:80536750-80536769 Msa1080820:CDS 50.0%
CAAAATGGTGGCTGCTGTGA+AGG + chr7_2:80537115-80537134 Msa1080820:three_prime_UTR 50.0%
CCATCTGGATGATGTGGTGG+TGG - chr7_2:80535331-80535350 None:intergenic 55.0%
CCACCACCACATCATCCAGA+TGG + chr7_2:80535328-80535347 Msa1080820:CDS 55.0%
CCACCACATCATCCAGATGG+CGG + chr7_2:80535331-80535350 Msa1080820:CDS 55.0%
CACCACATCATCCAGATGGC+GGG + chr7_2:80535332-80535351 Msa1080820:CDS 55.0%
TTCCCGCCATCTGGATGATG+TGG - chr7_2:80535337-80535356 None:intergenic 55.0%
AACCCTACACAGCGCTCAAG+CGG + chr7_2:80535478-80535497 Msa1080820:CDS 55.0%
AGCCGGAGTTTGCCTGATTG+TGG + chr7_2:80535605-80535624 Msa1080820:CDS 55.0%
GATGAACCCGGTCCACAATC+AGG - chr7_2:80535620-80535639 None:intergenic 55.0%
TTCGGATCGAACACGGTTGG+CGG + chr7_2:80535640-80535659 Msa1080820:CDS 55.0%
TGCTCTCCCTTGCTCTTGGA+TGG - chr7_2:80536760-80536779 None:intergenic 55.0%
CTGTTGCTCTCCCTTGCTCT+TGG - chr7_2:80536764-80536783 None:intergenic 55.0%
GCAAGGGAGAGCAACAGTGA+TGG + chr7_2:80536767-80536786 Msa1080820:CDS 55.0%
!! GCAGTTTTGGTCCAAGCCCA+AGG + chr7_2:80536879-80536898 Msa1080820:CDS 55.0%
CCATCTGGATGATGTGGTGG+TGG - chr7_2:80535331-80535350 None:intergenic 55.0%
CCACCACCACATCATCCAGA+TGG + chr7_2:80535328-80535347 Msa1080820:CDS 55.0%
CCACCACATCATCCAGATGG+CGG + chr7_2:80535331-80535350 Msa1080820:CDS 55.0%
CACCACATCATCCAGATGGC+GGG + chr7_2:80535332-80535351 Msa1080820:CDS 55.0%
TTCCCGCCATCTGGATGATG+TGG - chr7_2:80535337-80535356 None:intergenic 55.0%
AACCCTACACAGCGCTCAAG+CGG + chr7_2:80535478-80535497 Msa1080820:CDS 55.0%
AGCCGGAGTTTGCCTGATTG+TGG + chr7_2:80535605-80535624 Msa1080820:CDS 55.0%
GATGAACCCGGTCCACAATC+AGG - chr7_2:80535620-80535639 None:intergenic 55.0%
TTCGGATCGAACACGGTTGG+CGG + chr7_2:80535640-80535659 Msa1080820:CDS 55.0%
TGCTCTCCCTTGCTCTTGGA+TGG - chr7_2:80536760-80536779 None:intergenic 55.0%
CTGTTGCTCTCCCTTGCTCT+TGG - chr7_2:80536764-80536783 None:intergenic 55.0%
GCAAGGGAGAGCAACAGTGA+TGG + chr7_2:80536767-80536786 Msa1080820:CDS 55.0%
!! GCAGTTTTGGTCCAAGCCCA+AGG + chr7_2:80536879-80536898 Msa1080820:CDS 55.0%
CCGCCATCTGGATGATGTGG+TGG - chr7_2:80535334-80535353 None:intergenic 60.0%
!! TTCTAGGGTTTGCGCCGGTG+CGG - chr7_2:80535366-80535385 None:intergenic 60.0%
! CACCGCTTGAGCGCTGTGTA+GGG - chr7_2:80535483-80535502 None:intergenic 60.0%
! TCACCGCTTGAGCGCTGTGT+AGG - chr7_2:80535484-80535503 None:intergenic 60.0%
ACACAGCGCTCAAGCGGTGA+AGG + chr7_2:80535484-80535503 Msa1080820:CDS 60.0%
TGCGGTTGGAGTCGCTTGAC+CGG + chr7_2:80535570-80535589 Msa1080820:CDS 60.0%
ACCGGTCTAACGAAGCGAGC+CGG + chr7_2:80535588-80535607 Msa1080820:CDS 60.0%
! TCCGGCTCGCTTCGTTAGAC+CGG - chr7_2:80535592-80535611 None:intergenic 60.0%
CCGCCATCTGGATGATGTGG+TGG - chr7_2:80535334-80535353 None:intergenic 60.0%
!! TTCTAGGGTTTGCGCCGGTG+CGG - chr7_2:80535366-80535385 None:intergenic 60.0%
! CACCGCTTGAGCGCTGTGTA+GGG - chr7_2:80535483-80535502 None:intergenic 60.0%
! TCACCGCTTGAGCGCTGTGT+AGG - chr7_2:80535484-80535503 None:intergenic 60.0%
ACACAGCGCTCAAGCGGTGA+AGG + chr7_2:80535484-80535503 Msa1080820:CDS 60.0%
TGCGGTTGGAGTCGCTTGAC+CGG + chr7_2:80535570-80535589 Msa1080820:CDS 60.0%
ACCGGTCTAACGAAGCGAGC+CGG + chr7_2:80535588-80535607 Msa1080820:CDS 60.0%
! TCCGGCTCGCTTCGTTAGAC+CGG - chr7_2:80535592-80535611 None:intergenic 60.0%
GGATCGAACACGGTTGGCGG+TGG + chr7_2:80535643-80535662 Msa1080820:CDS 65.0%
ACACGGTTGGCGGTGGTGAG+TGG + chr7_2:80535650-80535669 Msa1080820:CDS 65.0%
CACGGTTGGCGGTGGTGAGT+GGG + chr7_2:80535651-80535670 Msa1080820:CDS 65.0%
!! TGGCGGTGGTGAGTGGGTTG+AGG + chr7_2:80535657-80535676 Msa1080820:CDS 65.0%
GTGGCGCAGCATCGCGATCT+TGG + chr7_2:80536201-80536220 Msa1080820:intron 65.0%
GGATCGAACACGGTTGGCGG+TGG + chr7_2:80535643-80535662 Msa1080820:CDS 65.0%
ACACGGTTGGCGGTGGTGAG+TGG + chr7_2:80535650-80535669 Msa1080820:CDS 65.0%
CACGGTTGGCGGTGGTGAGT+GGG + chr7_2:80535651-80535670 Msa1080820:CDS 65.0%
!! TGGCGGTGGTGAGTGGGTTG+AGG + chr7_2:80535657-80535676 Msa1080820:CDS 65.0%
GTGGCGCAGCATCGCGATCT+TGG + chr7_2:80536201-80536220 Msa1080820:intron 65.0%
CGGTGGAGGTTCCCGCCATC+TGG - chr7_2:80535346-80535365 None:intergenic 70.0%
! TAGGGTTTGCGCCGGTGCGG+TGG - chr7_2:80535363-80535382 None:intergenic 70.0%
CCGTGTGGCTGAGGCTGCGT+CGG - chr7_2:80536257-80536276 None:intergenic 70.0%
CCGACGCAGCCTCAGCCACA+CGG + chr7_2:80536254-80536273 Msa1080820:intron 70.0%
CGGTGGAGGTTCCCGCCATC+TGG - chr7_2:80535346-80535365 None:intergenic 70.0%
! TAGGGTTTGCGCCGGTGCGG+TGG - chr7_2:80535363-80535382 None:intergenic 70.0%
CCGTGTGGCTGAGGCTGCGT+CGG - chr7_2:80536257-80536276 None:intergenic 70.0%
CCGACGCAGCCTCAGCCACA+CGG + chr7_2:80536254-80536273 Msa1080820:intron 70.0%
GGCGGGAACCTCCACCGCAC+CGG + chr7_2:80535349-80535368 Msa1080820:CDS 75.0%
! GGTTTGCGCCGGTGCGGTGG+AGG - chr7_2:80535360-80535379 None:intergenic 75.0%
GGCGGGAACCTCCACCGCAC+CGG + chr7_2:80535349-80535368 Msa1080820:CDS 75.0%
! GGTTTGCGCCGGTGCGGTGG+AGG - chr7_2:80535360-80535379 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 80535260 80537353 80535260 ID=Msa1080820;Name=Msa1080820
chr7_2 mRNA 80535260 80537353 80535260 ID=Msa1080820-mRNA-1;Parent=Msa1080820;Name=Msa1080820-mRNA-1;_AED=0.01;_eAED=0.01;_QI=39|1|1|1|1|1|2|265|294
chr7_2 exon 80535260 80535824 80535260 ID=Msa1080820-mRNA-1:exon:20373;Parent=Msa1080820-mRNA-1
chr7_2 exon 80536730 80537353 80536730 ID=Msa1080820-mRNA-1:exon:20374;Parent=Msa1080820-mRNA-1
chr7_2 five_prime_UTR 80535260 80535298 80535260 ID=Msa1080820-mRNA-1:five_prime_utr;Parent=Msa1080820-mRNA-1
chr7_2 CDS 80535299 80535824 80535299 ID=Msa1080820-mRNA-1:cds;Parent=Msa1080820-mRNA-1
chr7_2 CDS 80536730 80537088 80536730 ID=Msa1080820-mRNA-1:cds;Parent=Msa1080820-mRNA-1
chr7_2 three_prime_UTR 80537089 80537353 80537089 ID=Msa1080820-mRNA-1:three_prime_utr;Parent=Msa1080820-mRNA-1
Gene Sequence

>Msa1080820

ATGAACGACTTACTCTCCGTCGATAACAACCACCACCACATCATCCAGATGGCGGGAACCTCCACCGCACCGGCGCAAACCCTAGAAAAATTCTTCCAAGAAGTGGAGTCGCTAAAAGAAGAACTAATAGAGTTAGAAAACCTCCACACAAGCCTCAAAAACTCACACGAAAAGAGCAAAACCCTACACAGCGCTCAAGCGGTGAAGGAGCTTCGTTCTGCTATGGATTCCGACGTTACTATCTCTCTGAAGAAAGCAAGATTCATTAAGGTGCGGTTGGAGTCGCTTGACCGGTCTAACGAAGCGAGCCGGAGTTTGCCTGATTGTGGACCGGGTTCATCTTCGGATCGAACACGGTTGGCGGTGGTGAGTGGGTTGAGGAAGAATTTGAAAGATTCAATGGAGAGTTTTAATGGACTAAGGGAGCAGATATCGTCGGAGTATAAAGAGACGGTGAAACGGAGATACTTTGCTGTTAATGGAGAGAAGGCTGATGATAAAACCGTTGACCTCCTCATCTCTACTGGTGAGAGCGAAACATTTTTACAGAAAGCCATCCAAGAGCAAGGGAGAGCAACAGTGATGGAGACAATACAAGAGATTGAAGAGAGACATGGTGCAGTGAAAGAGATAGAGAGAAATCTAAAAGAGCTTCATCAAGTGTTTCTGGACATGGCAGTTTTGGTCCAAGCCCAAGGTGAAGAATTGAATGACATTGAGAGCCAAATGATGCGAGCAAATTCGTATGTTAGGGGAGGAGTACAACAATTACATGTTGCTAGGAAACATCAAAAGAATACCCGTAAATGGACATGTTTTGCCATTTTACTATTCCTAATTATTGCTTTGGTTATAATCCTCCCTATTGTTTTAAAAAATAATTAG

Protein sequence

>Msa1080820

MNDLLSVDNNHHHIIQMAGTSTAPAQTLEKFFQEVESLKEELIELENLHTSLKNSHEKSKTLHSAQAVKELRSAMDSDVTISLKKARFIKVRLESLDRSNEASRSLPDCGPGSSSDRTRLAVVSGLRKNLKDSMESFNGLREQISSEYKETVKRRYFAVNGEKADDKTVDLLISTGESETFLQKAIQEQGRATVMETIQEIEERHGAVKEIERNLKELHQVFLDMAVLVQAQGEELNDIESQMMRANSYVRGGVQQLHVARKHQKNTRKWTCFAILLFLIIALVIILPIVLKNN*