AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1003730


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1003730 MtrunA17_Chr7g0214471 92.516 1109 47 1 1 1109 1 1073 0.0 2058
Msa1003730 MtrunA17_Chr4g0043451 42.222 225 120 6 195 410 98 321 1.47e-43 162
Msa1003730 MtrunA17_Chr2g0291731 31.124 347 231 4 692 1035 566 907 2.89e-34 142
Msa1003730 MtrunA17_Chr2g0291731 35.448 268 137 9 165 422 41 282 2.77e-32 136
Msa1003730 MtrunA17_Chr1g0196911 28.571 399 252 13 637 1030 769 1139 8.48e-25 112
Msa1003730 MtrunA17_Chr1g0196911 36.667 120 76 0 596 715 507 626 5.56e-21 100
Msa1003730 MtrunA17_Chr1g0196911 25.316 237 144 4 200 405 8 242 9.86e-15 79.7
Msa1003730 MtrunA17_Chr8g0390311 52.000 75 36 0 589 663 389 463 4.22e-20 97.1
Msa1003730 MtrunA17_Chr8g0390311 25.731 342 244 7 692 1030 658 992 2.33e-16 84.7
Msa1003730 MtrunA17_Chr7g0275961 30.675 163 104 3 597 759 257 410 1.90e-15 81.6
Msa1003730 MtrunA17_Chr7g0237931 44.000 75 39 2 589 662 231 303 1.99e-14 77.8
Msa1003730 MtrunA17_Chr5g0413681 29.371 143 75 4 598 739 283 400 2.21e-13 74.7
Msa1003730 MtrunA17_Chr7g0248251 43.373 83 43 2 580 662 262 340 5.23e-13 73.6
Msa1003730 MtrunA17_Chr4g0031431 39.437 71 42 1 592 662 252 321 2.30e-12 71.2
Msa1003730 MtrunA17_Chr1g0199321 43.056 72 38 2 592 662 244 313 4.69e-12 70.1
Msa1003730 MtrunA17_Chr4g0059201 26.768 198 113 6 596 789 320 489 6.26e-12 70.1
Msa1003730 MtrunA17_Chr7g0234671 40.580 69 40 1 594 662 77 144 1.16e-11 68.6
Msa1003730 MtrunA17_Chr5g0434171 41.429 70 38 2 594 662 34 101 1.62e-11 67.8
Msa1003730 MtrunA17_Chr4g0044631 43.478 69 36 2 595 662 14 80 1.71e-11 67.8
Msa1003730 MtrunA17_Chr2g0284461 34.783 92 56 3 574 664 272 360 4.51e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1003730 AT1G68940.3 26.619 278 146 12 564 803 212 469 3.17e-12 71.6
Msa1003730 AT1G68940.2 26.619 278 146 12 564 803 265 522 3.28e-12 71.6
Msa1003730 AT1G68940.1 26.619 278 146 12 564 803 265 522 3.34e-12 71.6
Msa1003730 AT3G07360.1 36.264 91 54 2 572 662 54 140 8.89e-12 69.3
Msa1003730 AT1G76390.1 38.542 96 51 3 594 682 24 118 1.21e-11 69.7
Msa1003730 AT1G76390.2 38.542 96 51 3 594 682 24 118 1.21e-11 69.7
Msa1003730 AT5G42340.1 38.750 80 48 1 583 662 278 356 1.44e-11 69.3
Msa1003730 AT3G46510.1 37.805 82 50 1 581 662 242 322 2.33e-11 68.6
Msa1003730 AT1G49780.1 43.478 69 36 2 595 662 14 80 2.65e-11 67.8
Msa1003730 AT1G20780.1 37.895 95 51 3 595 682 23 116 4.17e-11 67.8
Msa1003730 AT1G20780.2 37.895 95 51 3 595 682 23 116 4.17e-11 67.8
Msa1003730 AT1G20780.3 37.895 95 51 3 595 682 23 116 4.17e-11 67.8

Find 157 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTTTCATTATACACTTTC+TGG 0.079952 7_1:+781975 None:intergenic
AGAGTAGAGGTTATCTTATT+TGG 0.171223 7_1:+781015 None:intergenic
CGATCAAACGCTTCAAAATA+AGG 0.183245 7_1:+780699 None:intergenic
ATGGACTAGTTGATGTATTA+TGG 0.202999 7_1:-778242 Msa1003730:CDS
GCTAAGCATATAATCTCTTT+AGG 0.228808 7_1:-780518 Msa1003730:CDS
AGTATAAATGGCTTCATCTT+TGG 0.231855 7_1:-783133 None:intergenic
ACTGTTTAAATTAGATTCTA+TGG 0.282515 7_1:+781098 None:intergenic
CTAAGCATATAATCTCTTTA+GGG 0.289542 7_1:-780517 Msa1003730:CDS
AAGTGATCCTCTTCACTCTT+TGG 0.296475 7_1:-783028 Msa1003730:CDS
TTCAACTTCAGTAAAATATC+AGG 0.299538 7_1:-778775 Msa1003730:CDS
ATGCAGCTTAGTATTATTAC+TGG 0.308391 7_1:-782298 Msa1003730:CDS
TTGCTTTATATTACAAAGAT+TGG 0.314400 7_1:-781931 Msa1003730:CDS
TATAATGAAAGTTTGGATTC+AGG 0.314769 7_1:-781965 Msa1003730:CDS
GAGGTTTGAACAAGGAAATT+TGG 0.318367 7_1:-780474 Msa1003730:CDS
AATATTGTTGCCTGAGCTTT+GGG 0.324455 7_1:-782104 Msa1003730:CDS
AAAGGTTTGACCTGACTCTA+AGG 0.329503 7_1:+780817 None:intergenic
GATATTGCTCCCCTTCTTCA+TGG 0.330057 7_1:-778261 Msa1003730:CDS
GAAAGTGTATAATGAAAGTT+TGG 0.337823 7_1:-781972 Msa1003730:CDS
CAATATTGTTGCCTGAGCTT+TGG 0.341650 7_1:-782105 Msa1003730:CDS
TTCAAAATAAGGTTGCTAAA+TGG 0.346748 7_1:+780710 None:intergenic
CAGATTCTCCCTATACAAAA+TGG 0.348155 7_1:+778200 None:intergenic
AATTGTGAGAGAGGTTCTTA+TGG 0.355397 7_1:-781486 Msa1003730:CDS
GGAAGATGAAGAAGAAGAAA+TGG 0.363565 7_1:-779064 Msa1003730:CDS
AAGATAACCTCTACTCTTGA+TGG 0.367164 7_1:-781009 Msa1003730:intron
AAGAAAGCAGGTTATAATAA+TGG 0.369011 7_1:-779276 Msa1003730:CDS
TCTAAAGTATTTCCTGTTAC+CGG 0.369352 7_1:+780746 None:intergenic
AACTTTCTGATTTGAAGAAA+TGG 0.370655 7_1:-782063 Msa1003730:CDS
CAAAGAAAAGAAGGAACAAT+TGG 0.374214 7_1:-782743 Msa1003730:CDS
TGACCTGACTCTAAGGTAAC+TGG 0.378146 7_1:+780824 None:intergenic
CTTATTACACTTTGAACTAC+TGG 0.379975 7_1:-779771 Msa1003730:intron
CACTTCTTTCATAAGTGGCT+TGG 0.399869 7_1:-779882 Msa1003730:CDS
AACAGAACATGTCCGGTAAC+AGG 0.401864 7_1:-780758 Msa1003730:CDS
CTTCAGTAAAATATCAGGTT+TGG 0.408794 7_1:-778770 Msa1003730:CDS
GGGTTCTTTCGTTTCTCTGT+AGG 0.417240 7_1:-780496 Msa1003730:CDS
ATAACCTGCTTTCTTTAAGA+TGG 0.427114 7_1:+779284 None:intergenic
AATTCATCAGATAGTGATAG+TGG 0.427587 7_1:-782811 Msa1003730:CDS
AGAAATGGATGAAGAGTTCA+TGG 0.427897 7_1:-779049 Msa1003730:CDS
AATTCATGAACTGGTACTCT+TGG 0.428025 7_1:+781384 None:intergenic
CATCAAGGCATGGTTTCAAA+AGG 0.431872 7_1:-780783 Msa1003730:CDS
TCTTGAGCTTCTTCACAGTA+AGG 0.432710 7_1:-780354 Msa1003730:CDS
AAGAAAACTAACCGACGAAA+TGG 0.434545 7_1:+779197 None:intergenic
AAAGAAAAGAAGGAACAATT+GGG 0.435116 7_1:-782742 Msa1003730:CDS
TTCTTTCATAAGTGGCTTGG+TGG 0.436399 7_1:-779879 Msa1003730:CDS
TGAAGCGTTTGATCGATAAC+TGG 0.436744 7_1:-780691 Msa1003730:CDS
GATGTCACTTCTTTCATAAG+TGG 0.443620 7_1:-779887 Msa1003730:CDS
ATAAATTCCTGTGGTATGCT+TGG 0.444770 7_1:+780878 None:intergenic
TCTGACAAGAAATATCTTTG+AGG 0.446797 7_1:-780849 Msa1003730:CDS
ATACATAGAAAGTTTCCTAA+TGG 0.451786 7_1:-782500 Msa1003730:CDS
ACCGAAAATCTTCATCCATT+AGG 0.451957 7_1:+782485 None:intergenic
AACCTTGTCATCATTTAAGC+TGG 0.455375 7_1:+779383 None:intergenic
CAAGGACAGCTGCAGAAGAA+TGG 0.461431 7_1:-781161 Msa1003730:CDS
CTTTCTAAACAGTATAATGC+TGG 0.465237 7_1:-778895 Msa1003730:CDS
AATGGAAACTAGTGCTTTCA+CGG 0.469991 7_1:+782531 None:intergenic
ATTCCAATGGAAGGAATAGT+TGG 0.470242 7_1:+781887 None:intergenic
TTCTATGTATCCATTCAGAA+TGG 0.471459 7_1:+782513 None:intergenic
AATATTGTCCGCGCCTGAAA+AGG 0.474016 7_1:+782121 None:intergenic
GCACTAGTTTCCATTCTGAA+TGG 0.474787 7_1:-782523 Msa1003730:CDS
AACTTGTTAGAATCAATGAT+TGG 0.475567 7_1:-779024 Msa1003730:CDS
TAATACCTGTCGACTCGTAA+TGG 0.478741 7_1:+781853 None:intergenic
CATCAACTAGTCCATGAAGA+AGG 0.482713 7_1:+778250 None:intergenic
AGTTCAACTTCGTAGAATTG+AGG 0.484002 7_1:+781534 None:intergenic
CAAGTGTCTAATGTGAAAAG+AGG 0.484843 7_1:-782766 Msa1003730:CDS
GCCGTTGATCCTCTTCATCA+AGG 0.486422 7_1:+779229 None:intergenic
ATCTCCTAGCCTTGATGAAG+AGG 0.488093 7_1:-779238 Msa1003730:CDS
CTGAGAGATGATAGCTAAGA+AGG 0.488827 7_1:+778858 None:intergenic
ACCATTGCCTGTGGTGAGAA+TGG 0.489720 7_1:+781594 None:intergenic
ACTCCAACTATTCCTTCCAT+TGG 0.497321 7_1:-781890 Msa1003730:CDS
GCTCAAGTTCTTCATTCTCA+AGG 0.497709 7_1:+778824 None:intergenic
AGCATATATGAATCCTTCAA+TGG 0.500188 7_1:+782712 None:intergenic
TCAAGATCTTCTTTCCATCA+TGG 0.500865 7_1:-783057 Msa1003730:CDS
CTTGTCTAATAACTGTTACA+TGG 0.501990 7_1:-778930 Msa1003730:CDS
GTAGTTCAAAGTGTAATAAG+AGG 0.504871 7_1:+779774 None:intergenic
AGAATCTAAACATCTAGATA+TGG 0.504905 7_1:+778975 None:intergenic
GGTATATAGAATTCATGAAC+TGG 0.505922 7_1:+781375 None:intergenic
TCTTTCATAAGTGGCTTGGT+GGG 0.512051 7_1:-779878 Msa1003730:CDS
CGAATTTCCCACAGTTTGAG+AGG 0.512056 7_1:+780634 None:intergenic
CTTTGAAAGAAAAGCCATCA+AGG 0.514152 7_1:-780798 Msa1003730:CDS
TTTGGAGCAGCTTCTTGCAC+AGG 0.514480 7_1:-783115 Msa1003730:CDS
TTCTTTCGTTTCTCTGTAGG+AGG 0.515913 7_1:-780493 Msa1003730:CDS
ATTATCTTCCTTGAAAGAAG+AGG 0.516340 7_1:-780555 Msa1003730:CDS
GAAAAGAGGCAAAGAAAAGA+AGG 0.518665 7_1:-782752 Msa1003730:CDS
GAACCAGTTACCTTAGAGTC+AGG 0.520909 7_1:-780827 Msa1003730:CDS
TAATGACAGGGAAGTTCACT+TGG 0.526782 7_1:-781648 Msa1003730:intron
ATTGCTTATCTGATATCTTG+AGG 0.529217 7_1:+782942 None:intergenic
TTATCACAAATAAACGGTGA+TGG 0.533604 7_1:+778745 None:intergenic
TCAAAGATATTTCTTGTCAG+AGG 0.534699 7_1:+780851 None:intergenic
ATCAACTAGTCCATGAAGAA+GGG 0.539153 7_1:+778251 None:intergenic
TCATTGACAAAAGTTCAGTA+AGG 0.539896 7_1:+780300 None:intergenic
AGCAGCTTCTTGCACAGGAA+GGG 0.540666 7_1:-783110 Msa1003730:CDS
AGCTTTGAAAATTGTGAGAG+AGG 0.541901 7_1:-781495 Msa1003730:CDS
AAAGGGAAACAGAACATGTC+CGG 0.542373 7_1:-780765 Msa1003730:CDS
CTCTGTAGGAGGTTTGAACA+AGG 0.545055 7_1:-780482 Msa1003730:CDS
GAGATGATAGCTAAGAAGGC+AGG 0.545629 7_1:+778862 None:intergenic
AATAGACGCTCCCAAAGCTC+AGG 0.545942 7_1:+782094 None:intergenic
TTTGAATTTCATTCAACTCG+AGG 0.546248 7_1:-782434 Msa1003730:CDS
CGACTCGTAATGGATAATGA+TGG 0.548637 7_1:+781863 None:intergenic
ACTACCATCTTAAAGAAAGC+AGG 0.549148 7_1:-779288 Msa1003730:CDS
GGCATCAAGTGCCTCTGCAA+TGG 0.549842 7_1:+779404 None:intergenic
TAATAAGAGGACAGCGATGA+GGG 0.550715 7_1:+779787 None:intergenic
CTCAAGACTTGTAATCACCT+TGG 0.550915 7_1:+782393 None:intergenic
ACCATTCTCACCACAGGCAA+TGG 0.555072 7_1:-781595 Msa1003730:CDS
CTAGACATGTAGATTTGATG+AGG 0.555129 7_1:-778954 Msa1003730:CDS
GTTGCATATATAAGATAGCA+AGG 0.557196 7_1:-780397 Msa1003730:CDS
GGATAATGATGGAATTCCAA+TGG 0.558041 7_1:+781874 None:intergenic
GCCTTGATGAAGAGGATCAA+CGG 0.558378 7_1:-779230 Msa1003730:CDS
ATCAAGGCATGGTTTCAAAA+GGG 0.559344 7_1:-780782 Msa1003730:CDS
TTAGAATCAATGATTGGTGA+TGG 0.561943 7_1:-779018 Msa1003730:CDS
ATTATCCATTACGAGTCGAC+AGG 0.568253 7_1:-781858 Msa1003730:intron
TCAAACTGTGGGAAATTCGA+AGG 0.569601 7_1:-780630 Msa1003730:CDS
TTCTTGCTGACCATTGCCTG+TGG 0.569635 7_1:+781585 None:intergenic
AAAGAAAAGCCATCAAGGCA+TGG 0.569716 7_1:-780793 Msa1003730:CDS
ATTATACTGTTTAGAAAGTG+AGG 0.571728 7_1:+778900 None:intergenic
CTACGAAGTTGAACTTGATG+AGG 0.574721 7_1:-781526 Msa1003730:CDS
TAGACATGTAGATTTGATGA+GGG 0.575230 7_1:-778953 Msa1003730:CDS
ATTATTTGTTATCATTCCAG+TGG 0.576441 7_1:+779311 None:intergenic
TTTCTTACCATCAAGAGTAG+AGG 0.576884 7_1:+781002 None:intergenic
TTGCATATATAAGATAGCAA+GGG 0.577003 7_1:-780396 Msa1003730:CDS
TGATCCTCTTCATCAAGGCT+AGG 0.580353 7_1:+779234 None:intergenic
AATAATATTTGACAGCGGAA+AGG 0.581020 7_1:-781189 Msa1003730:intron
TACAAAGATTGGCTCAGTGA+AGG 0.585870 7_1:-781920 Msa1003730:CDS
GAGCAGCTTCTTGCACAGGA+AGG 0.586816 7_1:-783111 Msa1003730:CDS
AATGATGGAATTCCAATGGA+AGG 0.587739 7_1:+781878 None:intergenic
GCTATCATCTCTCAGCTGAA+AGG 0.587912 7_1:-778850 Msa1003730:CDS
CTATCTTCCAAAGAGTGAAG+AGG 0.591307 7_1:+783021 None:intergenic
GGAAACAAGTTAAATAACGA+AGG 0.597175 7_1:-782871 Msa1003730:CDS
GATCACTTGAATTACCATGA+TGG 0.601325 7_1:+783043 None:intergenic
ATATGCAACTAGAATCTGAT+CGG 0.602029 7_1:+780411 None:intergenic
ATATTCTCCAAGCATACCAC+AGG 0.604413 7_1:-780885 Msa1003730:CDS
CAACGAACCATTCTCACCAC+AGG 0.605684 7_1:-781601 Msa1003730:CDS
AGAACACAATTCTGAGACCA+AGG 0.607133 7_1:-782410 Msa1003730:CDS
TATATGCTTAGACAATTGAG+TGG 0.608616 7_1:-782697 Msa1003730:CDS
CAGGAAGGGTTCAAAGCAAG+CGG 0.609110 7_1:-783096 Msa1003730:CDS
AAATGGTATAACAACAAGGA+AGG 0.612008 7_1:-782046 Msa1003730:CDS
TGCCAGCTTAAATGATGACA+AGG 0.619717 7_1:-779385 Msa1003730:CDS
GTTTAGCATATACATAGAGA+TGG 0.619765 7_1:-779436 Msa1003730:CDS
GAAACAAGTTAAATAACGAA+GGG 0.623558 7_1:-782870 Msa1003730:CDS
TGCATATATAAGATAGCAAG+GGG 0.634241 7_1:-780395 Msa1003730:CDS
TTTGAGAGGCAAAATCAAGA+AGG 0.635942 7_1:+780648 None:intergenic
TAAGCATATAATCTCTTTAG+GGG 0.637602 7_1:-780516 Msa1003730:CDS
GACACATATAATGAGACGGA+GGG 0.637757 7_1:+778675 None:intergenic
TCAACTAGTCCATGAAGAAG+GGG 0.638307 7_1:+778252 None:intergenic
GCTAAATGTAACCATTTCGT+CGG 0.644677 7_1:-779208 Msa1003730:intron
AAATGACACATATAATGAGA+CGG 0.651445 7_1:+778671 None:intergenic
CTGTGGTGAGAATGGTTCGT+TGG 0.657069 7_1:+781602 None:intergenic
GACAGCGGAAAGGAACATCA+AGG 0.658940 7_1:-781179 Msa1003730:intron
CAAGCGGCAGAAAAGTGCAA+AGG 0.663772 7_1:-783080 Msa1003730:CDS
GTAATAAGAGGACAGCGATG+AGG 0.664032 7_1:+779786 None:intergenic
TCAAAGAGGAGAAACAATTG+TGG 0.665172 7_1:+782452 None:intergenic
GGCTGTGAATGCCATTGCAG+AGG 0.666777 7_1:-779415 Msa1003730:CDS
GAGTTGAATGAAATTCAAAG+AGG 0.670911 7_1:+782438 None:intergenic
AAGAAAAGAAGGAACAATTG+GGG 0.676981 7_1:-782741 Msa1003730:CDS
AGAAAAGAAGGAACAATTGG+GGG 0.678559 7_1:-782740 Msa1003730:CDS
AGAGGACAAATAAATTCCTG+TGG 0.684769 7_1:+780869 None:intergenic
AATAAGAGGACAGCGATGAG+GGG 0.685162 7_1:+779788 None:intergenic
TGACACATATAATGAGACGG+AGG 0.700368 7_1:+778674 None:intergenic
GAAGAAATGGTATAACAACA+AGG 0.703453 7_1:-782050 Msa1003730:CDS
GGATCAAATATACAACACTG+AGG 0.761941 7_1:+782197 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCTATAAAAAAATATACAAA+AGG + chr7_1:779991-780010 None:intergenic 10.0%
!!! TTCATTTTACATATATTTTT+TGG - chr7_1:780406-780425 Msa1003730:CDS 10.0%
!!! TCTTTTTGTTTTTTTTTTAA+TGG - chr7_1:782145-782164 Msa1003730:CDS 10.0%
!!! AGTGATAATAATGTTTTTAT+AGG - chr7_1:778431-778450 Msa1003730:intron 15.0%
!!! ACTATAAATAATTTTACTGT+AGG + chr7_1:780040-780059 None:intergenic 15.0%
!!! AGATTTTTATCACAAATAAA+CGG + chr7_1:782587-782606 None:intergenic 15.0%
!! ACTAAAATATTCAAATTCAT+TGG - chr7_1:782743-782762 Msa1003730:CDS 15.0%
!! TTGCTTTATATTACAAAGAT+TGG - chr7_1:779392-779411 Msa1003730:CDS 20.0%
!!! TTATCTTCATCATTTTCATA+TGG + chr7_1:779602-779621 None:intergenic 20.0%
!! ACTGTTTAAATTAGATTCTA+TGG + chr7_1:780228-780247 None:intergenic 20.0%
!!! TTACATATATTTTTTGGTGT+AGG - chr7_1:780412-780431 Msa1003730:CDS 20.0%
!!! ATAGTATTGCATTTTTTGTT+GGG + chr7_1:781002-781021 None:intergenic 20.0%
!!! AATAGTATTGCATTTTTTGT+TGG + chr7_1:781003-781022 None:intergenic 20.0%
!!! GTGAGATTTTTATCAAATTT+TGG - chr7_1:781050-781069 Msa1003730:CDS 20.0%
!! TCTTTCGAAATATTATTTAC+TGG - chr7_1:781390-781409 Msa1003730:CDS 20.0%
!!! CTATTTATTTTGTAGAAGAA+AGG - chr7_1:781414-781433 Msa1003730:CDS 20.0%
!! ATTGAATTTCATTCATTGTT+TGG + chr7_1:781804-781823 None:intergenic 20.0%
!! TCATTTAGTTAAAAAATGAC+AGG - chr7_1:782238-782257 Msa1003730:CDS 20.0%
!! GATAAAAATCTTGCTAATTT+CGG - chr7_1:782596-782615 Msa1003730:CDS 20.0%
!! ATCGTAAAAAAGTTAATAAG+TGG - chr7_1:782830-782849 Msa1003730:CDS 20.0%
!! TCATATCTATAAACTAGTAT+CGG + chr7_1:782943-782962 None:intergenic 20.0%
! GAAACAAGTTAAATAACGAA+GGG - chr7_1:778453-778472 Msa1003730:intron 25.0%
! AAAGAAAAGAAGGAACAATT+GGG - chr7_1:778581-778600 Msa1003730:intron 25.0%
! ATACATAGAAAGTTTCCTAA+TGG - chr7_1:778823-778842 Msa1003730:CDS 25.0%
! CCAAAGAAAAAAGAAAGTTT+CGG - chr7_1:779147-779166 Msa1003730:intron 25.0%
!! AACTTTCTGATTTGAAGAAA+TGG - chr7_1:779260-779279 Msa1003730:CDS 25.0%
! AACTTTCATTATACACTTTC+TGG + chr7_1:779351-779370 None:intergenic 25.0%
!! GAAAGTGTATAATGAAAGTT+TGG - chr7_1:779351-779370 Msa1003730:CDS 25.0%
! TATAATGAAAGTTTGGATTC+AGG - chr7_1:779358-779377 Msa1003730:CDS 25.0%
! TTGATCGATAATGAATACAA+AGG - chr7_1:779557-779576 Msa1003730:intron 25.0%
! TTAGAATTAAAGTCGGTTAA+TGG + chr7_1:779658-779677 None:intergenic 25.0%
!! TATGGAGAAATATTTTCTAG+TGG + chr7_1:780210-780229 None:intergenic 25.0%
!!! AAAATCCATTTGTTATCTGA+AGG + chr7_1:780371-780390 None:intergenic 25.0%
! TTCAAAATAAGGTTGCTAAA+TGG + chr7_1:780616-780635 None:intergenic 25.0%
! CTAAGCATATAATCTCTTTA+GGG - chr7_1:780806-780825 Msa1003730:CDS 25.0%
! TAAGCATATAATCTCTTTAG+GGG - chr7_1:780807-780826 Msa1003730:CDS 25.0%
! TTGCATATATAAGATAGCAA+GGG - chr7_1:780927-780946 Msa1003730:intron 25.0%
!!! TAGTATTGCATTTTTTGTTG+GGG + chr7_1:781001-781020 None:intergenic 25.0%
! CAAATAGAGGTTATAAATAG+CGG - chr7_1:781191-781210 Msa1003730:intron 25.0%
! GTTATAAATAGCGGTTATAA+CGG - chr7_1:781200-781219 Msa1003730:intron 25.0%
!!! TTGAGGTTGTTTTTATAAGA+GGG - chr7_1:781655-781674 Msa1003730:intron 25.0%
! ATAGACTGTTCAATATTTAG+AGG + chr7_1:781697-781716 None:intergenic 25.0%
! ATATTTAAAGATCAAGTGAC+TGG - chr7_1:781720-781739 Msa1003730:intron 25.0%
! AAAGTCTCTTTAACATTGAA+GGG + chr7_1:781752-781771 None:intergenic 25.0%
!! ATGTATATGCTAAACTTTTG+AGG + chr7_1:781882-781901 None:intergenic 25.0%
!!! ATTATTTGTTATCATTCCAG+TGG + chr7_1:782015-782034 None:intergenic 25.0%
! AAGAAAGCAGGTTATAATAA+TGG - chr7_1:782047-782066 Msa1003730:CDS 25.0%
!!! AACTTGTTAGAATCAATGAT+TGG - chr7_1:782299-782318 Msa1003730:CDS 25.0%
! AGAATCTAAACATCTAGATA+TGG + chr7_1:782351-782370 None:intergenic 25.0%
! ATTATACTGTTTAGAAAGTG+AGG + chr7_1:782426-782445 None:intergenic 25.0%
!! TATTTTACTGAAGTTGAACA+AGG + chr7_1:782546-782565 None:intergenic 25.0%
! TTCAACTTCAGTAAAATATC+AGG - chr7_1:782548-782567 Msa1003730:CDS 25.0%
! AAATGACACATATAATGAGA+CGG + chr7_1:782655-782674 None:intergenic 25.0%
!!! CTCATTATATGTGTCATTTT+AGG - chr7_1:782656-782675 Msa1003730:CDS 25.0%
! AATATTCAAATTCATTGGAG+TGG - chr7_1:782748-782767 Msa1003730:CDS 25.0%
! GATATTCCAAAGTGAAAAAT+AGG - chr7_1:782859-782878 Msa1003730:CDS 25.0%
ATTGCTTATCTGATATCTTG+AGG + chr7_1:778384-778403 None:intergenic 30.0%
GGAAACAAGTTAAATAACGA+AGG - chr7_1:778452-778471 Msa1003730:intron 30.0%
AATTCATCAGATAGTGATAG+TGG - chr7_1:778512-778531 Msa1003730:intron 30.0%
CAAAGAAAAGAAGGAACAAT+TGG - chr7_1:778580-778599 Msa1003730:intron 30.0%
AAGAAAAGAAGGAACAATTG+GGG - chr7_1:778582-778601 Msa1003730:intron 30.0%
AGCATATATGAATCCTTCAA+TGG + chr7_1:778614-778633 None:intergenic 30.0%
TATATGCTTAGACAATTGAG+TGG - chr7_1:778626-778645 Msa1003730:intron 30.0%
TTCTATGTATCCATTCAGAA+TGG + chr7_1:778813-778832 None:intergenic 30.0%
!! TCCTAATGGATGAAGATTTT+CGG - chr7_1:778837-778856 Msa1003730:CDS 30.0%
GAGTTGAATGAAATTCAAAG+AGG + chr7_1:778888-778907 None:intergenic 30.0%
TTTGAATTTCATTCAACTCG+AGG - chr7_1:778889-778908 Msa1003730:CDS 30.0%
ATGCAGCTTAGTATTATTAC+TGG - chr7_1:779025-779044 Msa1003730:CDS 30.0%
!!! CCGAAACTTTCTTTTTTCTT+TGG + chr7_1:779150-779169 None:intergenic 30.0%
GAAGAAATGGTATAACAACA+AGG - chr7_1:779273-779292 Msa1003730:CDS 30.0%
AAATGGTATAACAACAAGGA+AGG - chr7_1:779277-779296 Msa1003730:CDS 30.0%
TATGGACTCTTGTATAAACA+AGG + chr7_1:779584-779603 None:intergenic 30.0%
AATTAAAGTCGGTTAATGGT+TGG + chr7_1:779654-779673 None:intergenic 30.0%
CCTGTCATTAGAATTAAAGT+CGG + chr7_1:779665-779684 None:intergenic 30.0%
CGACTTTAATTCTAATGACA+GGG - chr7_1:779663-779682 Msa1003730:intron 30.0%
GGTATATAGAATTCATGAAC+TGG + chr7_1:779951-779970 None:intergenic 30.0%
AAGGTGAAATTATTACTCAC+AGG + chr7_1:779972-779991 None:intergenic 30.0%
TATTGACAGTGTGAAATATG+AGG + chr7_1:780118-780137 None:intergenic 30.0%
CTGTCAATAATATTTGACAG+CGG - chr7_1:780129-780148 Msa1003730:intron 30.0%
AATAATATTTGACAGCGGAA+AGG - chr7_1:780134-780153 Msa1003730:intron 30.0%
!! ATATTTTCTAGTGGCATTTC+TGG + chr7_1:780201-780220 None:intergenic 30.0%
!!! ATTTCGTTTGCTTTTTCATG+TGG + chr7_1:780269-780288 None:intergenic 30.0%
AGAGTAGAGGTTATCTTATT+TGG + chr7_1:780311-780330 None:intergenic 30.0%
TCAAAGATATTTCTTGTCAG+AGG + chr7_1:780475-780494 None:intergenic 30.0%
TCTGACAAGAAATATCTTTG+AGG - chr7_1:780474-780493 Msa1003730:CDS 30.0%
! TCTAAAGTATTTCCTGTTAC+CGG + chr7_1:780580-780599 None:intergenic 30.0%
ATTATCTTCCTTGAAAGAAG+AGG - chr7_1:780768-780787 Msa1003730:CDS 30.0%
! TGATTTTTCCTCTTCTTTCA+AGG + chr7_1:780779-780798 None:intergenic 30.0%
GCTAAGCATATAATCTCTTT+AGG - chr7_1:780805-780824 Msa1003730:CDS 30.0%
ATATGCAACTAGAATCTGAT+CGG + chr7_1:780915-780934 None:intergenic 30.0%
GTTGCATATATAAGATAGCA+AGG - chr7_1:780926-780945 Msa1003730:intron 30.0%
TGCATATATAAGATAGCAAG+GGG - chr7_1:780928-780947 Msa1003730:intron 30.0%
TCATTGACAAAAGTTCAGTA+AGG + chr7_1:781026-781045 None:intergenic 30.0%
! TTTTATCAGTGATGTACACT+TGG + chr7_1:781113-781132 None:intergenic 30.0%
GTATCAATGTTGTCAAATAG+AGG - chr7_1:781178-781197 Msa1003730:intron 30.0%
CAGAATAGTGTTATCAATGA+CGG + chr7_1:781358-781377 None:intergenic 30.0%
GTAGTTCAAAGTGTAATAAG+AGG + chr7_1:781552-781571 None:intergenic 30.0%
CTTATTACACTTTGAACTAC+TGG - chr7_1:781552-781571 Msa1003730:CDS 30.0%
!!! GTTGAGGTTGTTTTTATAAG+AGG - chr7_1:781654-781673 Msa1003730:intron 30.0%
GAAAGTCTCTTTAACATTGA+AGG + chr7_1:781753-781772 None:intergenic 30.0%
GTTTAGCATATACATAGAGA+TGG - chr7_1:781887-781906 Msa1003730:CDS 30.0%
!!! AGAGCTATTTTAATCTTGTG+TGG - chr7_1:781978-781997 Msa1003730:CDS 30.0%
! ATAACCTGCTTTCTTTAAGA+TGG + chr7_1:782042-782061 None:intergenic 30.0%
GTCACTTAATGAATGTATCT+AGG - chr7_1:782208-782227 Msa1003730:CDS 30.0%
TTAGAATCAATGATTGGTGA+TGG - chr7_1:782305-782324 Msa1003730:CDS 30.0%
TAGACATGTAGATTTGATGA+GGG - chr7_1:782370-782389 Msa1003730:CDS 30.0%
CTTGTCTAATAACTGTTACA+TGG - chr7_1:782393-782412 Msa1003730:CDS 30.0%
CTTTCTAAACAGTATAATGC+TGG - chr7_1:782428-782447 Msa1003730:CDS 30.0%
CTTCAGTAAAATATCAGGTT+TGG - chr7_1:782553-782572 Msa1003730:CDS 30.0%
TTATCACAAATAAACGGTGA+TGG + chr7_1:782581-782600 None:intergenic 30.0%
! GTGGACTGTCTAATTAAATA+AGG - chr7_1:782802-782821 Msa1003730:CDS 30.0%
!! TCTCAACCTATTTTTCACTT+TGG + chr7_1:782868-782887 None:intergenic 30.0%
!! CAGAACACTTTTGAAGATTA+TGG - chr7_1:783034-783053 Msa1003730:CDS 30.0%
!! ATGGACTAGTTGATGTATTA+TGG - chr7_1:783081-783100 Msa1003730:CDS 30.0%
TCAAGATCTTCTTTCCATCA+TGG - chr7_1:778266-778285 Msa1003730:CDS 35.0%
GATCACTTGAATTACCATGA+TGG + chr7_1:778283-778302 None:intergenic 35.0%
! CTCTTTTCACATTAGACACT+TGG + chr7_1:778559-778578 None:intergenic 35.0%
CAAGTGTCTAATGTGAAAAG+AGG - chr7_1:778557-778576 Msa1003730:intron 35.0%
GAAAAGAGGCAAAGAAAAGA+AGG - chr7_1:778571-778590 Msa1003730:intron 35.0%
AGAAAAGAAGGAACAATTGG+GGG - chr7_1:778583-778602 Msa1003730:intron 35.0%
AATGGAAACTAGTGCTTTCA+CGG + chr7_1:778795-778814 None:intergenic 35.0%
ACCGAAAATCTTCATCCATT+AGG + chr7_1:778841-778860 None:intergenic 35.0%
! AATGGATGAAGATTTTCGGT+CGG - chr7_1:778841-778860 Msa1003730:CDS 35.0%
TCAAAGAGGAGAAACAATTG+TGG + chr7_1:778874-778893 None:intergenic 35.0%
GGATCAAATATACAACACTG+AGG + chr7_1:779129-779148 None:intergenic 35.0%
AATATTGTTGCCTGAGCTTT+GGG - chr7_1:779219-779238 Msa1003730:CDS 35.0%
ATTCCAATGGAAGGAATAGT+TGG + chr7_1:779439-779458 None:intergenic 35.0%
! AATGATGGAATTCCAATGGA+AGG + chr7_1:779448-779467 None:intergenic 35.0%
! GGATAATGATGGAATTCCAA+TGG + chr7_1:779452-779471 None:intergenic 35.0%
CCGACTTTAATTCTAATGAC+AGG - chr7_1:779662-779681 Msa1003730:intron 35.0%
AGTTCAACTTCGTAGAATTG+AGG + chr7_1:779792-779811 None:intergenic 35.0%
!! AGCTTTGAAAATTGTGAGAG+AGG - chr7_1:779828-779847 Msa1003730:CDS 35.0%
AATTGTGAGAGAGGTTCTTA+TGG - chr7_1:779837-779856 Msa1003730:CDS 35.0%
AATTCATGAACTGGTACTCT+TGG + chr7_1:779942-779961 None:intergenic 35.0%
AAGATAACCTCTACTCTTGA+TGG - chr7_1:780314-780333 Msa1003730:CDS 35.0%
TTTCTTACCATCAAGAGTAG+AGG + chr7_1:780324-780343 None:intergenic 35.0%
AGCTTCCTTCAGATAACAAA+TGG - chr7_1:780363-780382 Msa1003730:CDS 35.0%
ATAAATTCCTGTGGTATGCT+TGG + chr7_1:780448-780467 None:intergenic 35.0%
AGAGGACAAATAAATTCCTG+TGG + chr7_1:780457-780476 None:intergenic 35.0%
!! CTTGATGGCTTTTCTTTCAA+AGG + chr7_1:780527-780546 None:intergenic 35.0%
! CTTTGAAAGAAAAGCCATCA+AGG - chr7_1:780525-780544 Msa1003730:CDS 35.0%
ATCAAGGCATGGTTTCAAAA+GGG - chr7_1:780541-780560 Msa1003730:CDS 35.0%
CGATCAAACGCTTCAAAATA+AGG + chr7_1:780627-780646 None:intergenic 35.0%
TTTGAGAGGCAAAATCAAGA+AGG + chr7_1:780678-780697 None:intergenic 35.0%
! TAAGTTAAAAAAGCGCGATG+AGG - chr7_1:780720-780739 Msa1003730:CDS 35.0%
!!! GCTATCGTTTTCAAGTTACA+AGG - chr7_1:780742-780761 Msa1003730:CDS 35.0%
GAGGTTTGAACAAGGAAATT+TGG - chr7_1:780849-780868 Msa1003730:CDS 35.0%
! CTGAACTTTTGTCAATGAAG+AGG - chr7_1:781028-781047 Msa1003730:CDS 35.0%
!! CATAAAGTGCTGTCAAATAG+TGG - chr7_1:781280-781299 Msa1003730:intron 35.0%
! GATGTCACTTCTTTCATAAG+TGG - chr7_1:781436-781455 Msa1003730:CDS 35.0%
AACCTTGTCATCATTTAAGC+TGG + chr7_1:781943-781962 None:intergenic 35.0%
TCATTCCAGTGGAAGAAAAA+TGG + chr7_1:782004-782023 None:intergenic 35.0%
ACTACCATCTTAAAGAAAGC+AGG - chr7_1:782035-782054 Msa1003730:CDS 35.0%
GCTAAATGTAACCATTTCGT+CGG - chr7_1:782115-782134 Msa1003730:CDS 35.0%
AAGAAAACTAACCGACGAAA+TGG + chr7_1:782129-782148 None:intergenic 35.0%
GGAAGATGAAGAAGAAGAAA+TGG - chr7_1:782259-782278 Msa1003730:CDS 35.0%
AGAAATGGATGAAGAGTTCA+TGG - chr7_1:782274-782293 Msa1003730:CDS 35.0%
CTAGACATGTAGATTTGATG+AGG - chr7_1:782369-782388 Msa1003730:CDS 35.0%
GTGGTAGTAAAGTAGTAGTT+AGG - chr7_1:782780-782799 Msa1003730:CDS 35.0%
GTAGTAAAGTAGTAGTTAGG+TGG - chr7_1:782783-782802 Msa1003730:CDS 35.0%
ATCAACTAGTCCATGAAGAA+GGG + chr7_1:783075-783094 None:intergenic 35.0%
!!! AACTGCATGCCATTTTGTAT+AGG - chr7_1:783114-783133 Msa1003730:CDS 35.0%
!!! ACTGCATGCCATTTTGTATA+GGG - chr7_1:783115-783134 Msa1003730:CDS 35.0%
CAGATTCTCCCTATACAAAA+TGG + chr7_1:783126-783145 None:intergenic 35.0%
AAGTGATCCTCTTCACTCTT+TGG - chr7_1:778295-778314 Msa1003730:CDS 40.0%
CTATCTTCCAAAGAGTGAAG+AGG + chr7_1:778305-778324 None:intergenic 40.0%
! GCACTAGTTTCCATTCTGAA+TGG - chr7_1:778800-778819 Msa1003730:CDS 40.0%
!! AGAACACAATTCTGAGACCA+AGG - chr7_1:778913-778932 Msa1003730:CDS 40.0%
CTCAAGACTTGTAATCACCT+TGG + chr7_1:778933-778952 None:intergenic 40.0%
CATAGAAAAAACTGCTGCTG+AGG - chr7_1:778967-778986 Msa1003730:CDS 40.0%
! CTCAAGTACGATTTTACGTG+CGG - chr7_1:779064-779083 Msa1003730:CDS 40.0%
! TCAAGTACGATTTTACGTGC+GGG - chr7_1:779065-779084 Msa1003730:CDS 40.0%
CAATATTGTTGCCTGAGCTT+TGG - chr7_1:779218-779237 Msa1003730:CDS 40.0%
! TACAAAGATTGGCTCAGTGA+AGG - chr7_1:779403-779422 Msa1003730:CDS 40.0%
ACTCCAACTATTCCTTCCAT+TGG - chr7_1:779433-779452 Msa1003730:CDS 40.0%
!! CGACTCGTAATGGATAATGA+TGG + chr7_1:779463-779482 None:intergenic 40.0%
ATTATCCATTACGAGTCGAC+AGG - chr7_1:779465-779484 Msa1003730:intron 40.0%
!! TAATACCTGTCGACTCGTAA+TGG + chr7_1:779473-779492 None:intergenic 40.0%
TAATGACAGGGAAGTTCACT+TGG - chr7_1:779675-779694 Msa1003730:intron 40.0%
CTACGAAGTTGAACTTGATG+AGG - chr7_1:779797-779816 Msa1003730:CDS 40.0%
ATATTCTCCAAGCATACCAC+AGG - chr7_1:780438-780457 Msa1003730:CDS 40.0%
AAAGGTTTGACCTGACTCTA+AGG + chr7_1:780509-780528 None:intergenic 40.0%
AAAGAAAAGCCATCAAGGCA+TGG - chr7_1:780530-780549 Msa1003730:CDS 40.0%
!!! CTTTTGAAACCATGCCTTGA+TGG + chr7_1:780542-780561 None:intergenic 40.0%
CATCAAGGCATGGTTTCAAA+AGG - chr7_1:780540-780559 Msa1003730:CDS 40.0%
AAAGGGAAACAGAACATGTC+CGG - chr7_1:780558-780577 Msa1003730:CDS 40.0%
! TGAAGCGTTTGATCGATAAC+TGG - chr7_1:780632-780651 Msa1003730:CDS 40.0%
! TGATTTTGCCTCTCAAACTG+TGG - chr7_1:780681-780700 Msa1003730:CDS 40.0%
! GATTTTGCCTCTCAAACTGT+GGG - chr7_1:780682-780701 Msa1003730:CDS 40.0%
TCAAACTGTGGGAAATTCGA+AGG - chr7_1:780693-780712 Msa1003730:CDS 40.0%
TTCTTTCGTTTCTCTGTAGG+AGG - chr7_1:780830-780849 Msa1003730:CDS 40.0%
TCTTGAGCTTCTTCACAGTA+AGG - chr7_1:780969-780988 Msa1003730:intron 40.0%
CACTTCTTTCATAAGTGGCT+TGG - chr7_1:781441-781460 Msa1003730:CDS 40.0%
! TTCTTTCATAAGTGGCTTGG+TGG - chr7_1:781444-781463 Msa1003730:CDS 40.0%
!! TCTTTCATAAGTGGCTTGGT+GGG - chr7_1:781445-781464 Msa1003730:CDS 40.0%
TAATAAGAGGACAGCGATGA+GGG + chr7_1:781539-781558 None:intergenic 40.0%
AACAACCTCAACATCATGCA+AGG + chr7_1:781646-781665 None:intergenic 40.0%
CTAGAACATATTTGCACTGC+AGG - chr7_1:781848-781867 Msa1003730:intron 40.0%
TGCCAGCTTAAATGATGACA+AGG - chr7_1:781938-781957 Msa1003730:CDS 40.0%
CTGAGAGATGATAGCTAAGA+AGG + chr7_1:782468-782487 None:intergenic 40.0%
GCTCAAGTTCTTCATTCTCA+AGG + chr7_1:782502-782521 None:intergenic 40.0%
GACACATATAATGAGACGGA+GGG + chr7_1:782651-782670 None:intergenic 40.0%
TGACACATATAATGAGACGG+AGG + chr7_1:782652-782671 None:intergenic 40.0%
ATTGGAGTGGTTGAAAGTAG+TGG - chr7_1:782761-782780 Msa1003730:CDS 40.0%
GGTTGAGACAATGCAATGAT+CGG - chr7_1:782880-782899 Msa1003730:CDS 40.0%
TCAACTAGTCCATGAAGAAG+GGG + chr7_1:783074-783093 None:intergenic 40.0%
CATCAACTAGTCCATGAAGA+AGG + chr7_1:783076-783095 None:intergenic 40.0%
ATTGGGGGAAAAGCCATTGA+AGG - chr7_1:778598-778617 Msa1003730:intron 45.0%
! GTTTTGCGACTCTCCTTTTC+AGG - chr7_1:779189-779208 Msa1003730:intron 45.0%
AATATTGTCCGCGCCTGAAA+AGG + chr7_1:779205-779224 None:intergenic 45.0%
GAACCAGTTACCTTAGAGTC+AGG - chr7_1:780496-780515 Msa1003730:CDS 45.0%
!! TGACCTGACTCTAAGGTAAC+TGG + chr7_1:780502-780521 None:intergenic 45.0%
AACAGAACATGTCCGGTAAC+AGG - chr7_1:780565-780584 Msa1003730:CDS 45.0%
CGAATTTCCCACAGTTTGAG+AGG + chr7_1:780692-780711 None:intergenic 45.0%
GGGTTCTTTCGTTTCTCTGT+AGG - chr7_1:780827-780846 Msa1003730:CDS 45.0%
CTCTGTAGGAGGTTTGAACA+AGG - chr7_1:780841-780860 Msa1003730:CDS 45.0%
AATAAGAGGACAGCGATGAG+GGG + chr7_1:781538-781557 None:intergenic 45.0%
GTAATAAGAGGACAGCGATG+AGG + chr7_1:781540-781559 None:intergenic 45.0%
!! CTTAGCCTTGCATGATGTTG+AGG - chr7_1:781638-781657 Msa1003730:CDS 45.0%
!!! TGTGGCCATTTTTCTTCCAC+TGG - chr7_1:781996-782015 Msa1003730:CDS 45.0%
!! ATCTCCTAGCCTTGATGAAG+AGG - chr7_1:782085-782104 Msa1003730:CDS 45.0%
TGATCCTCTTCATCAAGGCT+AGG + chr7_1:782092-782111 None:intergenic 45.0%
GCCTTGATGAAGAGGATCAA+CGG - chr7_1:782093-782112 Msa1003730:CDS 45.0%
GAGATGATAGCTAAGAAGGC+AGG + chr7_1:782464-782483 None:intergenic 45.0%
GCTATCATCTCTCAGCTGAA+AGG - chr7_1:782473-782492 Msa1003730:CDS 45.0%
GATATTGCTCCCCTTCTTCA+TGG - chr7_1:783062-783081 Msa1003730:CDS 45.0%
! TTTGGAGCAGCTTCTTGCAC+AGG - chr7_1:778208-778227 Msa1003730:CDS 50.0%
AGCAGCTTCTTGCACAGGAA+GGG - chr7_1:778213-778232 Msa1003730:CDS 50.0%
CAGGAAGGGTTCAAAGCAAG+CGG - chr7_1:778227-778246 Msa1003730:CDS 50.0%
! CAAGCGGCAGAAAAGTGCAA+AGG - chr7_1:778243-778262 Msa1003730:CDS 50.0%
AATAGACGCTCCCAAAGCTC+AGG + chr7_1:779232-779251 None:intergenic 50.0%
CTGTGGTGAGAATGGTTCGT+TGG + chr7_1:779724-779743 None:intergenic 50.0%
CAACGAACCATTCTCACCAC+AGG - chr7_1:779722-779741 Msa1003730:intron 50.0%
ACCATTCTCACCACAGGCAA+TGG - chr7_1:779728-779747 Msa1003730:intron 50.0%
ACCATTGCCTGTGGTGAGAA+TGG + chr7_1:779732-779751 None:intergenic 50.0%
TTCTTGCTGACCATTGCCTG+TGG + chr7_1:779741-779760 None:intergenic 50.0%
GACAGCGGAAAGGAACATCA+AGG - chr7_1:780144-780163 Msa1003730:intron 50.0%
CAAGGACAGCTGCAGAAGAA+TGG - chr7_1:780162-780181 Msa1003730:intron 50.0%
ATAACGGCGCTATAGCGTAG+TGG - chr7_1:781216-781235 Msa1003730:intron 50.0%
! TGACGGATCGCAGAGTATAG+CGG + chr7_1:781341-781360 None:intergenic 50.0%
! GCGATGAGGGGCTTTTCAAT+TGG + chr7_1:781526-781545 None:intergenic 50.0%
GCCGTTGATCCTCTTCATCA+AGG + chr7_1:782097-782116 None:intergenic 50.0%
GAGCAGCTTCTTGCACAGGA+AGG - chr7_1:778212-778231 Msa1003730:CDS 55.0%
GGCTGTGAATGCCATTGCAG+AGG - chr7_1:781908-781927 Msa1003730:CDS 55.0%
GGCATCAAGTGCCTCTGCAA+TGG + chr7_1:781922-781941 None:intergenic 55.0%
!! GCGACTCTCCTTTTCAGGCG+CGG - chr7_1:779194-779213 Msa1003730:intron 60.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 778197 783148 778197 ID=Msa1003730;Name=Msa1003730
chr7_1 mRNA 778197 783148 778197 ID=Msa1003730-mRNA-1;Parent=Msa1003730;Name=Msa1003730-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0.14|0|1|1|1|8|0|1109
chr7_1 exon 781859 783148 781859 ID=Msa1003730-mRNA-1:exon:240;Parent=Msa1003730-mRNA-1
chr7_1 exon 781374 781661 781374 ID=Msa1003730-mRNA-1:exon:239;Parent=Msa1003730-mRNA-1
chr7_1 exon 781010 781196 781010 ID=Msa1003730-mRNA-1:exon:238;Parent=Msa1003730-mRNA-1
chr7_1 exon 780296 780911 780296 ID=Msa1003730-mRNA-1:exon:237;Parent=Msa1003730-mRNA-1
chr7_1 exon 779772 779916 779772 ID=Msa1003730-mRNA-1:exon:236;Parent=Msa1003730-mRNA-1
chr7_1 exon 779209 779475 779209 ID=Msa1003730-mRNA-1:exon:235;Parent=Msa1003730-mRNA-1
chr7_1 exon 778668 779085 778668 ID=Msa1003730-mRNA-1:exon:234;Parent=Msa1003730-mRNA-1
chr7_1 exon 778197 778315 778197 ID=Msa1003730-mRNA-1:exon:233;Parent=Msa1003730-mRNA-1
chr7_1 CDS 781859 783148 781859 ID=Msa1003730-mRNA-1:cds;Parent=Msa1003730-mRNA-1
chr7_1 CDS 781374 781661 781374 ID=Msa1003730-mRNA-1:cds;Parent=Msa1003730-mRNA-1
chr7_1 CDS 781010 781196 781010 ID=Msa1003730-mRNA-1:cds;Parent=Msa1003730-mRNA-1
chr7_1 CDS 780296 780911 780296 ID=Msa1003730-mRNA-1:cds;Parent=Msa1003730-mRNA-1
chr7_1 CDS 779772 779916 779772 ID=Msa1003730-mRNA-1:cds;Parent=Msa1003730-mRNA-1
chr7_1 CDS 779209 779475 779209 ID=Msa1003730-mRNA-1:cds;Parent=Msa1003730-mRNA-1
chr7_1 CDS 778668 779085 778668 ID=Msa1003730-mRNA-1:cds;Parent=Msa1003730-mRNA-1
chr7_1 CDS 778197 778315 778197 ID=Msa1003730-mRNA-1:cds;Parent=Msa1003730-mRNA-1
Gene Sequence

>Msa1003730

ATGGCTTCATCTTTGGAGCAGCTTCTTGCACAGGAAGGGTTCAAAGCAAGCGGCAGAAAAGTGCAAAGGTCAAGATCTTCTTTCCATCATGGTAATTCAAGTGATCCTCTTCACTCTTTGGAAGATAGACTGTGTGTATCATCAAGTGAAAGAATTAAAACACAGAAAACAAAGTCTAAAACAGCCTCAAGATATCAGATAAGCAATACAAGTGACAATAAAAACATGAGATCAAGTGATAATAATGTTTTTATAGGAAACAAGTTAAATAACGAAGGGTCGAAGAACAGTGAATCTGAGAAGAACAAGTCTTACAATTCATCAGATAGTGATAGTGGATTTGACAATGCTTATTCAAACCAAGTGTCTAATGTGAAAAGAGGCAAAGAAAAGAAGGAACAATTGGGGGAAAAGCCATTGAAGGATTCATATATGCTTAGACAATTGAGTGGAAATAGAAAGAATATAAAGCATCAAGAAAAATCATACTCTAGATCAAATAGTAATAGCAAAAACTATGAAGATAGCAAGAACAAAAATAGCAATCATGCTATGCAATTGCAAGATGCTTCTAGTCTTGCTATTGATGAAATTGCCGTGAAAGCACTAGTTTCCATTCTGAATGGATACATAGAAAGTTTCCTAATGGATGAAGATTTTCGGTCGGCATTGCGCCACAATTGTTTCTCCTCTTTGAATTTCATTCAACTCGAGGAAGAACACAATTCTGAGACCAAGGTGATTACAAGTCTTGAGCAAGCAATTGAGTGCATAGAAAAAACTGCTGCTGAGGAAACTATATCTGCAACACATCTTAAAAGAGCAACAATGCAGCTTAGTATTATTACTGGTTTGAGTTTGAATGATCTCAAGTACGATTTTACGTGCGGGATTCAAAATTTCAAGTTATCAGCTTGTGCTCATCTTTACCTCAGTGTTGTATATTTGATCCAAAGAAAAAAGAAAGTTTCGGCGAAGCATCTTTTGCAAGTGTTTTGCGACTCTCCTTTTCAGGCGCGGACAATATTGTTGCCTGAGCTTTGGGAGCGTCTATTTTCTTCGCAACTTTCTGATTTGAAGAAATGGTATAACAACAAGGAAGGTGAAATTGTTTTAGATACACAAAACAAAGCAAGAAAGATAAAGATTCTCCAGAAAGTGTATAATGAAAGTTTGGATTCAGGAACTCAATTATTTGCTTTATATTACAAAGATTGGCTCAGTGAAGGAGTAGAAACTCCAACTATTCCTTCCATTGGAATTCCATCATTATCCATTACGAGTCGACAGGGAAGTTCACTTGGTCATTCTTTTGAGTCTTCAAGCTCCAACGAACCATTCTCACCACAGGCAATGGTCAGCAAGAAACTTTATGATTCTTTCTTTAGTAGTAAACCTCAATTCTACGAAGTTGAACTTGATGAGGATGAAGATAGCTTTGAAAATTGTGAGAGAGGTTCTTATGGTTCAACTGTCGTTAAAAAAACATTAATATATGAATCAGAAACTGTTAAATATATTGATCAAAGTACTGAAGAGTTCACTCCAAGAGTACCAGTTCATGAATTCTATATACCTCGGAAAGGAACATCAAGGACAGCTGCAGAAGAATGGAAAGAGAAGAATTCCAGAAATGCCACTAGAAAATATTTCTCCATAGAATCTAATTTAAACAGTCACATATTTAATGATCTACCACATGAAAAAGCAAACGAAATTTCTATCAAAAAGATGCAGCCAAATAAGATAACCTCTACTCTTGATGGATCATATTCTCCAAGCATACCACAGGAATTTATTTGTCCTCTGACAAGAAATATCTTTGAGGAACCAGTTACCTTAGAGTCAGGTCAAACCTTTGAAAGAAAAGCCATCAAGGCATGGTTTCAAAAGGGAAACAGAACATGTCCGGTAACAGGAAATACTTTAGAATGTGTAGTCATACCATTTAGCAACCTTATTTTGAAGCGTTTGATCGATAACTGGAAGTCAGAAGATTTTGATCGCCTTCTTGATTTTGCCTCTCAAACTGTGGGAAATTCGAAGGAAATTAAGTTAAAAAAGCGCGATGAGGCTATCGTTTTCAAGTTACAAGGTCTATTATCTTCCTTGAAAGAAGAGGAAAAATCAACTTATGCTAAGCATATAATCTCTTTAGGGGTTCTTTCGTTTCTCTGTAGGAGGTTTGAACAAGGAAATTTGGAAGAAAAATCACATGTGATCGAGATCTTGTTAAATTGTATCCGATCAGATTCTAGTTGCATATATAAGATAGCAAGGGGTGTCAACAGAAAATTTCTTCTTGAGCTTCTTCACAGTAAGGATGTTACCCCAACAAAAAATGCAATACTATTCCTTACTGAACTTTTGTCAATGAAGAGAAGAAAGGATGTCACTTCTTTCATAAGTGGCTTGGTGGGTGAAGATGTAGTTAGTACAATGCATATTGTGCTCATGCATCTTAAGAATTCTTCTCCAATTGAAAAGCCCCTCATCGCTGTCCTCTTATTACACTTTGAACTACTGGTTGAGCAGCCTCAAAAGTTTAGCATATACATAGAGATGGCTGTGAATGCCATTGCAGAGGCACTTGATGCCAGCTTAAATGATGACAAGGTTCAAAAGAAGTGTTGCAGAGCTATTTTAATCTTGTGTGGCCATTTTTCTTCCACTGGAATGATAACAAATAATACTACCATCTTAAAGAAAGCAGGTTATAATAATGGTAGCTCAGAATTGAAATCTCCTAGCCTTGATGAAGAGGATCAACGGCTAAATGTAACCATTTCGTCGGAAGATGAAGAAGAAGAAATGGATGAAGAGTTCATGGCAAACTTGTTAGAATCAATGATTGGTGATGGAGAAAGTCTATTTTTGAAGACCATATCTAGATGTTTAGATTCTAGACATGTAGATTTGATGAGGGCTTGTCTAATAACTGTTACATGGTTGAGTTCCTCACTTTCTAAACAGTATAATGCTGGATTGCATCTTCCTGCCTTCTTAGCTATCATCTCTCAGCTGAAAGGAATCCTTGAGAATGAAGAACTTGAGCTCAAGACTCTTGCATCTATGTCCTTGTTCAACTTCAGTAAAATATCAGGTTTGGCACCATCACCGTTTATTTGTGATAAAAATCTTGCTAATTTCGGAACTATTGAAAGCAATTTTAAATGTTATTCCCTCCGTCTCATTATATGTGTCATTTTAGAATGCAGAACACTTTTGAAGATTATGGCAGACGATATTGCTCCCCTTCTTCATGGACTAGTTGATGTATTATGGACTGCTAAGAAACTGCATGCCATTTTGTATAGGGAGAATCTGTAG

Protein sequence

>Msa1003730

MASSLEQLLAQEGFKASGRKVQRSRSSFHHGNSSDPLHSLEDRLCVSSSERIKTQKTKSKTASRYQISNTSDNKNMRSSDNNVFIGNKLNNEGSKNSESEKNKSYNSSDSDSGFDNAYSNQVSNVKRGKEKKEQLGEKPLKDSYMLRQLSGNRKNIKHQEKSYSRSNSNSKNYEDSKNKNSNHAMQLQDASSLAIDEIAVKALVSILNGYIESFLMDEDFRSALRHNCFSSLNFIQLEEEHNSETKVITSLEQAIECIEKTAAEETISATHLKRATMQLSIITGLSLNDLKYDFTCGIQNFKLSACAHLYLSVVYLIQRKKKVSAKHLLQVFCDSPFQARTILLPELWERLFSSQLSDLKKWYNNKEGEIVLDTQNKARKIKILQKVYNESLDSGTQLFALYYKDWLSEGVETPTIPSIGIPSLSITSRQGSSLGHSFESSSSNEPFSPQAMVSKKLYDSFFSSKPQFYEVELDEDEDSFENCERGSYGSTVVKKTLIYESETVKYIDQSTEEFTPRVPVHEFYIPRKGTSRTAAEEWKEKNSRNATRKYFSIESNLNSHIFNDLPHEKANEISIKKMQPNKITSTLDGSYSPSIPQEFICPLTRNIFEEPVTLESGQTFERKAIKAWFQKGNRTCPVTGNTLECVVIPFSNLILKRLIDNWKSEDFDRLLDFASQTVGNSKEIKLKKRDEAIVFKLQGLLSSLKEEEKSTYAKHIISLGVLSFLCRRFEQGNLEEKSHVIEILLNCIRSDSSCIYKIARGVNRKFLLELLHSKDVTPTKNAILFLTELLSMKRRKDVTSFISGLVGEDVVSTMHIVLMHLKNSSPIEKPLIAVLLLHFELLVEQPQKFSIYIEMAVNAIAEALDASLNDDKVQKKCCRAILILCGHFSSTGMITNNTTILKKAGYNNGSSELKSPSLDEEDQRLNVTISSEDEEEEMDEEFMANLLESMIGDGESLFLKTISRCLDSRHVDLMRACLITVTWLSSSLSKQYNAGLHLPAFLAIISQLKGILENEELELKTLASMSLFNFSKISGLAPSPFICDKNLANFGTIESNFKCYSLRLIICVILECRTLLKIMADDIAPLLHGLVDVLWTAKKLHAILYRENL*