AlfalfaGEDB | Msa1110190

M. sativa cultivar zhongmu-4 / Msa1110190

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1110190	XP_024627213.1	92.713	247	18	0	24	270	1234	1480	1.02e-146	457

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1110190	A0A072TXI8	92.713	247	18	0	24	270	1427	1673	3.20e-146	457

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0001790	Msa1110190	0.807915	4.002595e-50	-8.615850e-47
Msa0003700	Msa1110190	0.800222	1.594428e-48	-8.615850e-47
Msa0020930	Msa1110190	0.808616	2.837880e-50	-8.615850e-47
Msa0036140	Msa1110190	0.816093	6.605169e-52	-8.615850e-47
Msa0040450	Msa1110190	0.800811	1.209885e-48	-8.615850e-47
Msa0051770	Msa1110190	0.806992	6.284275e-50	-8.615850e-47
Msa0068680	Msa1110190	0.800749	1.245267e-48	-8.615850e-47
Msa0084080	Msa1110190	0.843074	1.752328e-58	-8.615850e-47
Msa0090360	Msa1110190	0.828232	1.008117e-54	-8.615850e-47
Msa0095560	Msa1110190	0.825036	5.835265e-54	-8.615850e-47
Msa0109690	Msa1110190	0.809649	1.704455e-50	-8.615850e-47
Msa0120040	Msa1110190	-0.817024	4.085622e-52	-8.615850e-47
Msa0607580	Msa1110190	0.807264	5.503232e-50	-8.615850e-47
Msa0610430	Msa1110190	0.804101	2.538869e-49	-8.615850e-47
Msa0612960	Msa1110190	0.814516	1.480355e-51	-8.615850e-47
Msa0627450	Msa1110190	0.810236	1.274583e-50	-8.615850e-47
Msa0638070	Msa1110190	0.808796	2.596745e-50	-8.615850e-47
Msa0648880	Msa1110190	0.800840	1.193274e-48	-8.615850e-47
Msa0657580	Msa1110190	0.816586	5.123095e-52	-8.615850e-47
Msa0663390	Msa1110190	0.802873	4.563169e-49	-8.615850e-47
Msa0667050	Msa1110190	0.816779	4.638992e-52	-8.615850e-47
Msa0679710	Msa1110190	0.835007	2.155877e-56	-8.615850e-47
Msa0688070	Msa1110190	0.805262	1.453010e-49	-8.615850e-47
Msa0691380	Msa1110190	0.823794	1.143063e-53	-8.615850e-47
Msa0692230	Msa1110190	0.833033	6.727577e-56	-8.615850e-47
Msa0693380	Msa1110190	0.814115	1.816085e-51	-8.615850e-47
Msa0698360	Msa1110190	0.801225	9.953861e-49	-8.615850e-47
Msa0700650	Msa1110190	0.802123	6.513232e-49	-8.615850e-47
Msa0724830	Msa1110190	0.812250	4.660410e-51	-8.615850e-47
Msa0740510	Msa1110190	0.821320	4.298988e-53	-8.615850e-47
Msa0740740	Msa1110190	0.804795	1.819425e-49	-8.615850e-47
Msa0756540	Msa1110190	0.800556	1.363296e-48	-8.615850e-47
Msa0762250	Msa1110190	0.808007	3.826339e-50	-8.615850e-47
Msa0767300	Msa1110190	0.803015	4.264198e-49	-8.615850e-47
Msa0769920	Msa1110190	0.807528	4.836836e-50	-8.615850e-47
Msa0790510	Msa1110190	0.841943	3.495680e-58	-8.615850e-47
Msa0796700	Msa1110190	0.806152	9.451441e-50	-8.615850e-47
Msa0816700	Msa1110190	0.800781	1.226953e-48	-8.615850e-47
Msa0820770	Msa1110190	0.825049	5.793181e-54	-8.615850e-47
Msa0827350	Msa1110190	-0.808242	3.410755e-50	-8.615850e-47
Msa0137840	Msa1110190	0.821888	3.178137e-53	-8.615850e-47
Msa0159930	Msa1110190	0.818713	1.698240e-52	-8.615850e-47
Msa0170570	Msa1110190	0.813912	2.012478e-51	-8.615850e-47
Msa0171120	Msa1110190	0.810061	1.389733e-50	-8.615850e-47
Msa0178930	Msa1110190	0.803033	4.228339e-49	-8.615850e-47
Msa0184040	Msa1110190	0.826709	2.337193e-54	-8.615850e-47
Msa0188830	Msa1110190	0.809995	1.436538e-50	-8.615850e-47
Msa0191050	Msa1110190	0.802343	5.867302e-49	-8.615850e-47
Msa0205850	Msa1110190	0.801568	8.466416e-49	-8.615850e-47
Msa0210450	Msa1110190	0.836067	1.162761e-56	-8.615850e-47
Msa0216240	Msa1110190	0.827015	1.975277e-54	-8.615850e-47
Msa0220440	Msa1110190	0.813473	2.514204e-51	-8.615850e-47
Msa0220580	Msa1110190	0.819024	1.442740e-52	-8.615850e-47
Msa0221060	Msa1110190	0.811631	6.357668e-51	-8.615850e-47
Msa0233350	Msa1110190	0.812157	4.882365e-51	-8.615850e-47
Msa0372660	Msa1110190	0.802088	6.623290e-49	-8.615850e-47
Msa0372670	Msa1110190	0.806539	7.831564e-50	-8.615850e-47
Msa0373930	Msa1110190	0.809811	1.573680e-50	-8.615850e-47
Msa0376300	Msa1110190	0.807412	5.118548e-50	-8.615850e-47
Msa0376310	Msa1110190	0.801536	8.598416e-49	-8.615850e-47
Msa0376350	Msa1110190	0.823271	1.515006e-53	-8.615850e-47
Msa0379640	Msa1110190	0.814064	1.863490e-51	-8.615850e-47
Msa0389340	Msa1110190	0.811440	6.992505e-51	-8.615850e-47
Msa0410650	Msa1110190	0.809819	1.566819e-50	-8.615850e-47
Msa0417270	Msa1110190	0.812194	4.793552e-51	-8.615850e-47
Msa0424790	Msa1110190	0.810965	8.866564e-51	-8.615850e-47
Msa0426900	Msa1110190	0.812302	4.539286e-51	-8.615850e-47
Msa0436760	Msa1110190	0.808972	2.380883e-50	-8.615850e-47
Msa0453350	Msa1110190	0.810444	1.148965e-50	-8.615850e-47
Msa0479970	Msa1110190	0.845989	2.878557e-59	-8.615850e-47
Msa0481530	Msa1110190	0.809305	2.020490e-50	-8.615850e-47
Msa1023920	Msa1110190	0.807479	4.954255e-50	-8.615850e-47
Msa1034150	Msa1110190	0.828092	1.089473e-54	-8.615850e-47
Msa1043390	Msa1110190	0.818629	1.773807e-52	-8.615850e-47
Msa1043450	Msa1110190	0.819339	1.223394e-52	-8.615850e-47
Msa1078710	Msa1110190	0.818211	2.205936e-52	-8.615850e-47
Msa1080160	Msa1110190	0.804839	1.781745e-49	-8.615850e-47
Msa1082500	Msa1110190	0.823875	1.094463e-53	-8.615850e-47
Msa1085200	Msa1110190	0.814491	1.499485e-51	-8.615850e-47
Msa1090260	Msa1110190	0.806030	1.002567e-49	-8.615850e-47
Msa1102770	Msa1110190	0.806446	8.192129e-50	-8.615850e-47
Msa0243100	Msa1110190	0.806651	7.415490e-50	-8.615850e-47
Msa0243710	Msa1110190	0.826341	2.860436e-54	-8.615850e-47
Msa0260680	Msa1110190	0.802166	6.382820e-49	-8.615850e-47
Msa0261930	Msa1110190	0.815478	9.057371e-52	-8.615850e-47
Msa0264690	Msa1110190	0.802607	5.176964e-49	-8.615850e-47
Msa0270100	Msa1110190	0.832553	8.851417e-56	-8.615850e-47
Msa0271810	Msa1110190	0.801231	9.928478e-49	-8.615850e-47
Msa0282250	Msa1110190	0.808037	3.769940e-50	-8.615850e-47
Msa0287410	Msa1110190	0.802638	5.101911e-49	-8.615850e-47
Msa0287650	Msa1110190	0.827257	1.729171e-54	-8.615850e-47
Msa0294950	Msa1110190	0.801157	1.028032e-48	-8.615850e-47
Msa0299580	Msa1110190	0.803393	3.561569e-49	-8.615850e-47
Msa0305700	Msa1110190	0.802654	5.062352e-49	-8.615850e-47
Msa0311700	Msa1110190	0.808669	2.764949e-50	-8.615850e-47
Msa0317730	Msa1110190	0.801614	8.287007e-49	-8.615850e-47
Msa0334360	Msa1110190	0.817922	2.565302e-52	-8.615850e-47
Msa0336420	Msa1110190	0.802586	5.230224e-49	-8.615850e-47
Msa0338110	Msa1110190	0.807918	3.997585e-50	-8.615850e-47
Msa0341540	Msa1110190	0.804211	2.409036e-49	-8.615850e-47
Msa1107900	Msa1110190	0.806690	7.277343e-50	-8.615850e-47
Msa1110190	Msa1111180	0.807003	6.250395e-50	-8.615850e-47
Msa1110190	Msa1113670	0.804465	2.132639e-49	-8.615850e-47
Msa1110190	Msa1115430	0.802065	6.696187e-49	-8.615850e-47
Msa1110190	Msa1131220	0.817437	3.299182e-52	-8.615850e-47
Msa1110190	Msa1133710	0.820064	8.355391e-53	-8.615850e-47
Msa1110190	Msa1151720	0.829336	5.450502e-55	-8.615850e-47
Msa1110190	Msa1199990	0.800212	1.602637e-48	-8.615850e-47
Msa1110190	Msa1214020	0.804657	1.944198e-49	-8.615850e-47
Msa1110190	Msa1214890	0.835922	1.265562e-56	-8.615850e-47
Msa1110190	Msa1224480	0.806278	8.889946e-50	-8.615850e-47
Msa1110190	Msa1233890	0.808524	2.968711e-50	-8.615850e-47
Msa1110190	Msa1247250	0.817396	3.370767e-52	-8.615850e-47
Msa1110190	Msa1274520	0.813857	2.069843e-51	-8.615850e-47
Msa1110190	Msa1305340	0.809735	1.633738e-50	-8.615850e-47
Msa1110190	Msa1305660	0.801071	1.070582e-48	-8.615850e-47
Msa1110190	Msa1306840	0.818430	1.967963e-52	-8.615850e-47
Msa1110190	Msa1314340	0.803652	3.147356e-49	-8.615850e-47
Msa1110190	Msa1318990	0.802967	4.362512e-49	-8.615850e-47
Msa1110190	Msa1320620	0.804986	1.659688e-49	-8.615850e-47
Msa1110190	Msa1327550	0.829641	4.594416e-55	-8.615850e-47
Msa1110190	Msa1328710	0.810547	1.092094e-50	-8.615850e-47
Msa1110190	Msa1331910	0.829099	6.221787e-55	-8.615850e-47
Msa1110190	Msa1340650	0.805971	1.031871e-49	-8.615850e-47
Msa1110190	Msa1346730	0.800670	1.292439e-48	-8.615850e-47
Msa1110190	Msa1353980	0.809259	2.067547e-50	-8.615850e-47
Msa1110190	Msa1359040	0.823538	1.312418e-53	-8.615850e-47
Msa1110190	Msa1377820	0.808766	2.636175e-50	-8.615850e-47
Msa1110190	Msa1384350	0.821084	4.872362e-53	-8.615850e-47
Msa1110190	Msa1390800	0.811229	7.771868e-51	-8.615850e-47
Msa1110190	Msa1392260	0.817744	2.813481e-52	-8.615850e-47
Msa1110190	Msa1397120	0.805383	1.371116e-49	-8.615850e-47
Msa1110190	Msa1402270	0.822602	2.169974e-53	-8.615850e-47
Msa1110190	Msa1403890	0.806235	9.075312e-50	-8.615850e-47
Msa1110190	Msa1404300	0.809001	2.347110e-50	-8.615850e-47
Msa1110190	Msa1424450	0.812259	4.638728e-51	-8.615850e-47
Msa1110190	Msa1426030	0.817817	2.708614e-52	-8.615850e-47
Msa1110190	Msa1429900	0.809679	1.679182e-50	-8.615850e-47
Msa1110190	Msa1433390	0.831637	1.491118e-55	-8.615850e-47
Msa1110190	Msa1443850	0.814563	1.445600e-51	-8.615850e-47
Msa1110190	Msa1452240	0.819089	1.394791e-52	-8.615850e-47
Msa1110190	Msa1454120	0.827435	1.566654e-54	-8.615850e-47
Msa0484780	Msa1110190	0.816851	4.468531e-52	-8.615850e-47
Msa0502880	Msa1110190	0.818983	1.474323e-52	-8.615850e-47
Msa0507680	Msa1110190	0.805238	1.469885e-49	-8.615850e-47
Msa0509610	Msa1110190	0.800495	1.403383e-48	-8.615850e-47
Msa0516170	Msa1110190	0.811760	5.958252e-51	-8.615850e-47
Msa0523460	Msa1110190	0.808350	3.234312e-50	-8.615850e-47
Msa0545070	Msa1110190	0.801576	8.436906e-49	-8.615850e-47
Msa0561230	Msa1110190	0.826772	2.257514e-54	-8.615850e-47
Msa0563840	Msa1110190	0.806991	6.286430e-50	-8.615850e-47
Msa0577500	Msa1110190	0.819409	1.179346e-52	-8.615850e-47
Msa0578860	Msa1110190	0.817505	3.184559e-52	-8.615850e-47
Msa0580180	Msa1110190	0.814664	1.373185e-51	-8.615850e-47
Msa0861090	Msa1110190	0.820511	6.600062e-53	-8.615850e-47
Msa0869100	Msa1110190	0.800404	1.464407e-48	-8.615850e-47
Msa0933230	Msa1110190	0.818772	1.646140e-52	-8.615850e-47
Msa0933310	Msa1110190	0.820319	7.305500e-53	-8.615850e-47
Msa0947660	Msa1110190	0.803564	3.282695e-49	-8.615850e-47
Msa0969520	Msa1110190	0.821405	4.108288e-53	-8.615850e-47
Msa0969810	Msa1110190	0.801452	8.944218e-49	-8.615850e-47
Msa0971090	Msa1110190	0.825137	5.523862e-54	-8.615850e-47
Msa0978250	Msa1110190	0.815849	7.488671e-52	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1110190	MtrunA17_Chr7g0228021	92.713	247	18	0	24	270	1427	1673	6.15e-150	457

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 76 sgRNAs with CRISPR-Local

Find 252 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTGATACAATACAAGTTTAA+TGG	0.246158	7_3:+54783303	None:intergenic
AAAACTCAAGGGCGCGTATT+GGG	0.316722	7_3:-54783259	Msa1110190:three_prime_UTR
TAACTTGCCGGCAGACTATC+TGG	0.327032	7_3:-54783977	Msa1110190:CDS
GCAATATGATGGTGAGGATT+TGG	0.341499	7_3:-54784842	None:intergenic
TTCAGATGACTATCTTGAAA+TGG	0.342944	7_3:-54783911	Msa1110190:CDS
CTGGTCATTTGGCAGTTTGT+TGG	0.347511	7_3:+54783687	None:intergenic
TCCTCTGAAGGATAACTTGC+CGG	0.376364	7_3:-54783989	Msa1110190:CDS
CAAACCCCTTCATTTCTGTT+TGG	0.385284	7_3:-54783397	Msa1110190:three_prime_UTR
GCATTTAGAAGCTGGTCATT+TGG	0.398067	7_3:+54783676	None:intergenic
TTCACCCAATAATTCAGAAA+AGG	0.413013	7_3:+54783801	None:intergenic
GACAAATCAACTTGTGCTCT+TGG	0.423685	7_3:+54784681	None:intergenic
CAACAGCATCTTCAACTTCA+AGG	0.424982	7_3:+54784121	None:intergenic
TACGTGCAATGGGTCTAACT+TGG	0.430843	7_3:+54783334	None:intergenic
GCCCTCTCTTTCCGATCAAA+TGG	0.432513	7_3:+54783486	None:intergenic
CAATTGAGACATTCAGAGTT+GGG	0.456346	7_3:+54783544	None:intergenic
TTCCAATTGGGATGTTCCTG+TGG	0.456509	7_3:-54783442	Msa1110190:three_prime_UTR
ACTGCTGTCTTTCCCTATGC+TGG	0.457710	7_3:+54784023	None:intergenic
TCACCCAATAATTCAGAAAA+GGG	0.475241	7_3:+54783802	None:intergenic
CGAGGAAGAGGTAAAGGTGT+AGG	0.477046	7_3:-54784795	Msa1110190:CDS
AGTAGCCGTGGGCGAGGAAG+AGG	0.478259	7_3:-54784807	Msa1110190:CDS
AAACGACCAAACAGAAATGA+AGG	0.481719	7_3:+54783391	None:intergenic
ACCTGTCAACTATTCTTTCG+AGG	0.482067	7_3:-54784145	Msa1110190:CDS
TGGAATCATCCTACGTGCAA+TGG	0.482136	7_3:+54783323	None:intergenic
TCAGATGACTATCTTGAAAT+GGG	0.482625	7_3:-54783910	Msa1110190:CDS
ACCCACAGGAACATCCCAAT+TGG	0.484894	7_3:+54783440	None:intergenic
TCATCTGAAGGGTGAGTCCT+TGG	0.486626	7_3:+54783925	None:intergenic
GGAATCATCCTACGTGCAAT+GGG	0.492566	7_3:+54783324	None:intergenic
ACGTGCAATGGGTCTAACTT+GGG	0.496601	7_3:+54783335	None:intergenic
AGCTTCTAAATGCTGACATA+GGG	0.497872	7_3:-54783666	Msa1110190:CDS
GACTATCTTGAAATGGGAGG+TGG	0.501569	7_3:-54783904	Msa1110190:CDS
TCCTCGAAAGAATAGTTGAC+AGG	0.505492	7_3:+54784144	None:intergenic
GCATCGATGGTTCCAGCATA+GGG	0.512993	7_3:-54784035	Msa1110190:CDS
TGTATTGTATCACAGATTTG+AGG	0.521632	7_3:-54783293	Msa1110190:three_prime_UTR
CTATGTCAGCATTTAGAAGC+TGG	0.522343	7_3:+54783668	None:intergenic
TCAATTGAGACATTCAGAGT+TGG	0.526141	7_3:+54783543	None:intergenic
TCCAATTGGGATGTTCCTGT+GGG	0.527122	7_3:-54783441	Msa1110190:three_prime_UTR
CAGCTTCTAAATGCTGACAT+AGG	0.531625	7_3:-54783667	Msa1110190:CDS
TCATATCATCAATTGCATCA+TGG	0.534466	7_3:+54783848	None:intergenic
CGTGGGCGAGGAAGAGGTAA+AGG	0.534832	7_3:-54784801	Msa1110190:CDS
CTATTGTGATGAGCATTCTC+CGG	0.537714	7_3:+54783634	None:intergenic
TGCATCGATGGTTCCAGCAT+AGG	0.544546	7_3:-54784036	Msa1110190:CDS
AAAGTGAGGTACAAGATGGA+GGG	0.557442	7_3:-54783723	Msa1110190:CDS
TCTTGCTCCAGATAGTCTGC+CGG	0.571577	7_3:+54783970	None:intergenic
TATGCTAGAAATTCCTCTGA+AGG	0.571983	7_3:-54784001	Msa1110190:CDS
AAACTCAAGGGCGCGTATTG+GGG	0.574046	7_3:-54783258	Msa1110190:three_prime_UTR
TGACATAGGGGTATTAATGC+CGG	0.576758	7_3:-54783653	Msa1110190:CDS
GCTAAAAGTGAGGTACAAGA+TGG	0.577341	7_3:-54783727	Msa1110190:CDS
ATTTCAAGATAGTCATCTGA+AGG	0.578417	7_3:+54783913	None:intergenic
CTGGAGCAAGAAACAGATGC+TGG	0.578995	7_3:-54783958	Msa1110190:CDS
CATCGCGCTAAAAGCTACGT+TGG	0.586972	7_3:+54783603	None:intergenic
AGCTCATGAAGTTAAGCGAA+GGG	0.592407	7_3:-54784655	Msa1110190:intron
TTCCATTTGATCGGAAAGAG+AGG	0.592787	7_3:-54783488	Msa1110190:three_prime_UTR
CCCAATAATTCAGAAAAGGG+TGG	0.594996	7_3:+54783805	None:intergenic
AAGAGAGGGCTGTGCTGACA+TGG	0.595197	7_3:-54783473	Msa1110190:three_prime_UTR
CTGTGTAGACGATAGTGAGA+TGG	0.600273	7_3:-54783878	Msa1110190:CDS
TCCATTTGATCGGAAAGAGA+GGG	0.601534	7_3:-54783487	Msa1110190:three_prime_UTR
AAAAGTGAGGTACAAGATGG+AGG	0.603230	7_3:-54783724	Msa1110190:CDS
CTTTACCTCTTCCTCGCCCA+CGG	0.603329	7_3:+54784802	None:intergenic
CAGCTCATGAAGTTAAGCGA+AGG	0.606944	7_3:-54784656	Msa1110190:CDS
AACGACCAAACAGAAATGAA+GGG	0.607294	7_3:+54783392	None:intergenic
GATGATGTTTCAGTTTCAGA+CGG	0.607698	7_3:+54784732	None:intergenic
CGTGCAATGGGTCTAACTTG+GGG	0.607769	7_3:+54783336	None:intergenic
AAAATAATTATACAACCCAC+AGG	0.611753	7_3:+54783426	None:intergenic
CTCAAGGGCGCGTATTGGGG+TGG	0.618072	7_3:-54783255	Msa1110190:three_prime_UTR
AGAAGGGCAATATGATGGTG+AGG	0.619520	7_3:-54784848	None:intergenic
GCCGGCAAGTTATCCTTCAG+AGG	0.633739	7_3:+54783988	None:intergenic
GCTTCTAAATGCTGACATAG+GGG	0.640746	7_3:-54783665	Msa1110190:CDS
ACGACCAAACAGAAATGAAG+GGG	0.645151	7_3:+54783393	None:intergenic
TTTCAAGATAGTCATCTGAA+GGG	0.648451	7_3:+54783914	None:intergenic
GCAATGAGATAGATATGACT+AGG	0.652120	7_3:-54783233	Msa1110190:three_prime_UTR
GATGACTATCTTGAAATGGG+AGG	0.652875	7_3:-54783907	Msa1110190:CDS
AAGTGAGGTACAAGATGGAG+GGG	0.659061	7_3:-54783722	Msa1110190:CDS
ATGCTGGTGCAGCAACACCA+AGG	0.694780	7_3:-54783942	Msa1110190:CDS
AAGTTAGACCCATTGCACGT+AGG	0.705754	7_3:-54783332	Msa1110190:three_prime_UTR
TGACGAAAAGGCTAAAAGTG+AGG	0.707000	7_3:-54783737	Msa1110190:CDS
AGAGGGCTGTGCTGACATGG+TGG	0.748069	7_3:-54783470	Msa1110190:three_prime_UTR

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AACTTAAAAAAGATATAATT+TGG	-	chr7_3:54783433-54783452	Msa1110190:three_prime_UTR	10.0%
!!	AACTTAAAAAAGATATAATT+TGG	-	chr7_3:54783433-54783452	Msa1110190:three_prime_UTR	10.0%
!!	ATAAATAACAAAGTTAGATA+GGG	+	chr7_3:54783500-54783519	None:intergenic	15.0%
!!!	TAGTTCAGATATATTATTTT+TGG	-	chr7_3:54784204-54784223	Msa1110190:intron	15.0%
!!!	AGTTCAGATATATTATTTTT+GGG	-	chr7_3:54784205-54784224	Msa1110190:intron	15.0%
!!	ATAAATAACAAAGTTAGATA+GGG	+	chr7_3:54783500-54783519	None:intergenic	15.0%
!!!	TAGTTCAGATATATTATTTT+TGG	-	chr7_3:54784204-54784223	Msa1110190:intron	15.0%
!!!	AGTTCAGATATATTATTTTT+GGG	-	chr7_3:54784205-54784224	Msa1110190:intron	15.0%
!!!	GCATTGTATTTAATATTTTC+AGG	+	chr7_3:54783364-54783383	None:intergenic	20.0%
!!	CATAAATAACAAAGTTAGAT+AGG	+	chr7_3:54783501-54783520	None:intergenic	20.0%
!!	TTTCAAGGATAAAAATGAAA+AGG	-	chr7_3:54783723-54783742	Msa1110190:CDS	20.0%
!!!	GCATTGTATTTAATATTTTC+AGG	+	chr7_3:54783364-54783383	None:intergenic	20.0%
!!	CATAAATAACAAAGTTAGAT+AGG	+	chr7_3:54783501-54783520	None:intergenic	20.0%
!!	TTTCAAGGATAAAAATGAAA+AGG	-	chr7_3:54783723-54783742	Msa1110190:CDS	20.0%
!	TAAGTTAACGATAAGAACAA+TGG	+	chr7_3:54783419-54783438	None:intergenic	25.0%
!	TATACGTAACCGAAATTTAT+GGG	+	chr7_3:54783559-54783578	None:intergenic	25.0%
!!!	GTTGATTTTTTCTGTTTTTC+GGG	+	chr7_3:54783606-54783625	None:intergenic	25.0%
!!!	GGTTGATTTTTTCTGTTTTT+CGG	+	chr7_3:54783607-54783626	None:intergenic	25.0%
!	AGCAAATGTATTAAAGAAAC+TGG	+	chr7_3:54783628-54783647	None:intergenic	25.0%
!	AAAGAAAACAACATGTAAGT+AGG	+	chr7_3:54783661-54783680	None:intergenic	25.0%
!!	TTTCTTTTCTTCCTCAAAAA+CGG	+	chr7_3:54784388-54784407	None:intergenic	25.0%
!	AACGTAAAAACTATTTACAG+TGG	+	chr7_3:54784452-54784471	None:intergenic	25.0%
!	AAAATAATTATACAACCCAC+AGG	+	chr7_3:54784542-54784561	None:intergenic	25.0%
!	GTGATACAATACAAGTTTAA+TGG	+	chr7_3:54784665-54784684	None:intergenic	25.0%
!	TAAGTTAACGATAAGAACAA+TGG	+	chr7_3:54783419-54783438	None:intergenic	25.0%
!	TATACGTAACCGAAATTTAT+GGG	+	chr7_3:54783559-54783578	None:intergenic	25.0%
!!!	GTTGATTTTTTCTGTTTTTC+GGG	+	chr7_3:54783606-54783625	None:intergenic	25.0%
!!!	GGTTGATTTTTTCTGTTTTT+CGG	+	chr7_3:54783607-54783626	None:intergenic	25.0%
!	AGCAAATGTATTAAAGAAAC+TGG	+	chr7_3:54783628-54783647	None:intergenic	25.0%
!	AAAGAAAACAACATGTAAGT+AGG	+	chr7_3:54783661-54783680	None:intergenic	25.0%
!!	TTTCTTTTCTTCCTCAAAAA+CGG	+	chr7_3:54784388-54784407	None:intergenic	25.0%
!	AACGTAAAAACTATTTACAG+TGG	+	chr7_3:54784452-54784471	None:intergenic	25.0%
!	AAAATAATTATACAACCCAC+AGG	+	chr7_3:54784542-54784561	None:intergenic	25.0%
!	GTGATACAATACAAGTTTAA+TGG	+	chr7_3:54784665-54784684	None:intergenic	25.0%
	ATTAAATACAATGCTCCTTC+AGG	-	chr7_3:54783370-54783389	Msa1110190:three_prime_UTR	30.0%
	TTAACGATAAGAACAATGGA+AGG	+	chr7_3:54783415-54783434	None:intergenic	30.0%
	AAACATTTCATGAAGTTGAC+TGG	+	chr7_3:54783470-54783489	None:intergenic	30.0%
	GTATACGTAACCGAAATTTA+TGG	+	chr7_3:54783560-54783579	None:intergenic	30.0%
	AACTGTCAACTATTCTTTCA+AGG	-	chr7_3:54783708-54783727	Msa1110190:CDS	30.0%
	AAAGTAAACAACAGGTTAGT+AGG	+	chr7_3:54783778-54783797	None:intergenic	30.0%
	TTTCAAGATAGTCATCTGAA+GGG	+	chr7_3:54784054-54784073	None:intergenic	30.0%
	ATTTCAAGATAGTCATCTGA+AGG	+	chr7_3:54784055-54784074	None:intergenic	30.0%
	TTCAGATGACTATCTTGAAA+TGG	-	chr7_3:54784054-54784073	Msa1110190:CDS	30.0%
	TCAGATGACTATCTTGAAAT+GGG	-	chr7_3:54784055-54784074	Msa1110190:CDS	30.0%
	TCATATCATCAATTGCATCA+TGG	+	chr7_3:54784120-54784139	None:intergenic	30.0%
	TCACCCAATAATTCAGAAAA+GGG	+	chr7_3:54784166-54784185	None:intergenic	30.0%
	TTCACCCAATAATTCAGAAA+AGG	+	chr7_3:54784167-54784186	None:intergenic	30.0%
!!	TGAACTACTTTTATCACGAT+CGG	+	chr7_3:54784191-54784210	None:intergenic	30.0%
!!!	ATTATTTTTGGGTGACGAAA+AGG	-	chr7_3:54784216-54784235	Msa1110190:intron	30.0%
!	CGTTTTATCTTCCATTTGAT+CGG	-	chr7_3:54784468-54784487	Msa1110190:intron	30.0%
!!!	ATGGTGGTTTTTTTCCAATT+GGG	-	chr7_3:54784511-54784530	Msa1110190:intron	30.0%
	TGTATTGTATCACAGATTTG+AGG	-	chr7_3:54784672-54784691	Msa1110190:CDS	30.0%
	CCAAAGTCAAAAAAACTCAA+GGG	-	chr7_3:54784695-54784714	Msa1110190:CDS	30.0%
	ATTAAATACAATGCTCCTTC+AGG	-	chr7_3:54783370-54783389	Msa1110190:three_prime_UTR	30.0%
	TTAACGATAAGAACAATGGA+AGG	+	chr7_3:54783415-54783434	None:intergenic	30.0%
	AAACATTTCATGAAGTTGAC+TGG	+	chr7_3:54783470-54783489	None:intergenic	30.0%
	GTATACGTAACCGAAATTTA+TGG	+	chr7_3:54783560-54783579	None:intergenic	30.0%
	AACTGTCAACTATTCTTTCA+AGG	-	chr7_3:54783708-54783727	Msa1110190:CDS	30.0%
	AAAGTAAACAACAGGTTAGT+AGG	+	chr7_3:54783778-54783797	None:intergenic	30.0%
	TTTCAAGATAGTCATCTGAA+GGG	+	chr7_3:54784054-54784073	None:intergenic	30.0%
	ATTTCAAGATAGTCATCTGA+AGG	+	chr7_3:54784055-54784074	None:intergenic	30.0%
	TTCAGATGACTATCTTGAAA+TGG	-	chr7_3:54784054-54784073	Msa1110190:CDS	30.0%
	TCAGATGACTATCTTGAAAT+GGG	-	chr7_3:54784055-54784074	Msa1110190:CDS	30.0%
	TCATATCATCAATTGCATCA+TGG	+	chr7_3:54784120-54784139	None:intergenic	30.0%
	TCACCCAATAATTCAGAAAA+GGG	+	chr7_3:54784166-54784185	None:intergenic	30.0%
	TTCACCCAATAATTCAGAAA+AGG	+	chr7_3:54784167-54784186	None:intergenic	30.0%
!!	TGAACTACTTTTATCACGAT+CGG	+	chr7_3:54784191-54784210	None:intergenic	30.0%
!!!	ATTATTTTTGGGTGACGAAA+AGG	-	chr7_3:54784216-54784235	Msa1110190:intron	30.0%
!	CGTTTTATCTTCCATTTGAT+CGG	-	chr7_3:54784468-54784487	Msa1110190:intron	30.0%
!!!	ATGGTGGTTTTTTTCCAATT+GGG	-	chr7_3:54784511-54784530	Msa1110190:intron	30.0%
	TGTATTGTATCACAGATTTG+AGG	-	chr7_3:54784672-54784691	Msa1110190:CDS	30.0%
	CCAAAGTCAAAAAAACTCAA+GGG	-	chr7_3:54784695-54784714	Msa1110190:CDS	30.0%
	TTCAGAAAAAAAAGTAGCCG+TGG	-	chr7_3:54783146-54783165	Msa1110190:three_prime_UTR	35.0%
	TCAGAAAAAAAAGTAGCCGT+GGG	-	chr7_3:54783147-54783166	Msa1110190:three_prime_UTR	35.0%
!	AAAGGTGTAGGAGTAAAAAG+AGG	-	chr7_3:54783182-54783201	Msa1110190:three_prime_UTR	35.0%
	GATGATGTTTCAGTTTCAGA+CGG	+	chr7_3:54783236-54783255	None:intergenic	35.0%
	CAAGAGAGAAAAAAACCTGA+AGG	+	chr7_3:54783388-54783407	None:intergenic	35.0%
	AAACAACATGTAAGTAGGAC+AGG	+	chr7_3:54783656-54783675	None:intergenic	35.0%
	TGACTGGAAAAGTAAACAAC+AGG	+	chr7_3:54783786-54783805	None:intergenic	35.0%
	TATGCTAGAAATTCCTCTGA+AGG	-	chr7_3:54783964-54783983	Msa1110190:CDS	35.0%
!	TCCACCCTTTTCTGAATTAT+TGG	-	chr7_3:54784159-54784178	Msa1110190:CDS	35.0%
!	CCACCCTTTTCTGAATTATT+GGG	-	chr7_3:54784160-54784179	Msa1110190:CDS	35.0%
	AGCTTCTAAATGCTGACATA+GGG	-	chr7_3:54784299-54784318	Msa1110190:intron	35.0%
	CAATTGAGACATTCAGAGTT+GGG	+	chr7_3:54784424-54784443	None:intergenic	35.0%
	TCAATTGAGACATTCAGAGT+TGG	+	chr7_3:54784425-54784444	None:intergenic	35.0%
!!!	CATGGTGGTTTTTTTCCAAT+TGG	-	chr7_3:54784510-54784529	Msa1110190:intron	35.0%
	AACGACCAAACAGAAATGAA+GGG	+	chr7_3:54784576-54784595	None:intergenic	35.0%
	AAACGACCAAACAGAAATGA+AGG	+	chr7_3:54784577-54784596	None:intergenic	35.0%
	GCCAAAGTCAAAAAAACTCA+AGG	-	chr7_3:54784694-54784713	Msa1110190:CDS	35.0%
!!!	CCCTTGAGTTTTTTTGACTT+TGG	+	chr7_3:54784698-54784717	None:intergenic	35.0%
	GCAATGAGATAGATATGACT+AGG	-	chr7_3:54784732-54784751	Msa1110190:CDS	35.0%
	TTCAGAAAAAAAAGTAGCCG+TGG	-	chr7_3:54783146-54783165	Msa1110190:three_prime_UTR	35.0%
	TCAGAAAAAAAAGTAGCCGT+GGG	-	chr7_3:54783147-54783166	Msa1110190:three_prime_UTR	35.0%
!	AAAGGTGTAGGAGTAAAAAG+AGG	-	chr7_3:54783182-54783201	Msa1110190:three_prime_UTR	35.0%
	GATGATGTTTCAGTTTCAGA+CGG	+	chr7_3:54783236-54783255	None:intergenic	35.0%
	CAAGAGAGAAAAAAACCTGA+AGG	+	chr7_3:54783388-54783407	None:intergenic	35.0%
	AAACAACATGTAAGTAGGAC+AGG	+	chr7_3:54783656-54783675	None:intergenic	35.0%
	TGACTGGAAAAGTAAACAAC+AGG	+	chr7_3:54783786-54783805	None:intergenic	35.0%
	TATGCTAGAAATTCCTCTGA+AGG	-	chr7_3:54783964-54783983	Msa1110190:CDS	35.0%
!	TCCACCCTTTTCTGAATTAT+TGG	-	chr7_3:54784159-54784178	Msa1110190:CDS	35.0%
!	CCACCCTTTTCTGAATTATT+GGG	-	chr7_3:54784160-54784179	Msa1110190:CDS	35.0%
	AGCTTCTAAATGCTGACATA+GGG	-	chr7_3:54784299-54784318	Msa1110190:intron	35.0%
	CAATTGAGACATTCAGAGTT+GGG	+	chr7_3:54784424-54784443	None:intergenic	35.0%
	TCAATTGAGACATTCAGAGT+TGG	+	chr7_3:54784425-54784444	None:intergenic	35.0%
!!!	CATGGTGGTTTTTTTCCAAT+TGG	-	chr7_3:54784510-54784529	Msa1110190:intron	35.0%
	AACGACCAAACAGAAATGAA+GGG	+	chr7_3:54784576-54784595	None:intergenic	35.0%
	AAACGACCAAACAGAAATGA+AGG	+	chr7_3:54784577-54784596	None:intergenic	35.0%
	GCCAAAGTCAAAAAAACTCA+AGG	-	chr7_3:54784694-54784713	Msa1110190:CDS	35.0%
!!!	CCCTTGAGTTTTTTTGACTT+TGG	+	chr7_3:54784698-54784717	None:intergenic	35.0%
	GCAATGAGATAGATATGACT+AGG	-	chr7_3:54784732-54784751	Msa1110190:CDS	35.0%
	TGTAGGAGTAAAAAGAGGCA+GGG	-	chr7_3:54783187-54783206	Msa1110190:three_prime_UTR	40.0%
	GACAAATCAACTTGTGCTCT+TGG	+	chr7_3:54783287-54783306	None:intergenic	40.0%
	AGCTCATGAAGTTAAGCGAA+GGG	-	chr7_3:54783310-54783329	Msa1110190:three_prime_UTR	40.0%
	CGTAACCGAAATTTATGGGT+GGG	+	chr7_3:54783555-54783574	None:intergenic	40.0%
	ACGTAACCGAAATTTATGGG+TGG	+	chr7_3:54783556-54783575	None:intergenic	40.0%
!	TTTTCCAGTCAATGCGATCT+CGG	-	chr7_3:54783795-54783814	Msa1110190:CDS	40.0%
	ACCTGTCAACTATTCTTTCG+AGG	-	chr7_3:54783820-54783839	Msa1110190:CDS	40.0%
	TCCTCGAAAGAATAGTTGAC+AGG	+	chr7_3:54783824-54783843	None:intergenic	40.0%
	CAACAGCATCTTCAACTTCA+AGG	+	chr7_3:54783847-54783866	None:intergenic	40.0%
	GAAAAATCTACGTGCATCGA+TGG	-	chr7_3:54783917-54783936	Msa1110190:CDS	40.0%
	GATGACTATCTTGAAATGGG+AGG	-	chr7_3:54784058-54784077	Msa1110190:CDS	40.0%
	CCCAATAATTCAGAAAAGGG+TGG	+	chr7_3:54784163-54784182	None:intergenic	40.0%
	TGACGAAAAGGCTAAAAGTG+AGG	-	chr7_3:54784228-54784247	Msa1110190:intron	40.0%
	GCTAAAAGTGAGGTACAAGA+TGG	-	chr7_3:54784238-54784257	Msa1110190:intron	40.0%
	AAAAGTGAGGTACAAGATGG+AGG	-	chr7_3:54784241-54784260	Msa1110190:intron	40.0%
	AAAGTGAGGTACAAGATGGA+GGG	-	chr7_3:54784242-54784261	Msa1110190:intron	40.0%
	GCATTTAGAAGCTGGTCATT+TGG	+	chr7_3:54784292-54784311	None:intergenic	40.0%
	CTATGTCAGCATTTAGAAGC+TGG	+	chr7_3:54784300-54784319	None:intergenic	40.0%
	CAGCTTCTAAATGCTGACAT+AGG	-	chr7_3:54784298-54784317	Msa1110190:intron	40.0%
	GCTTCTAAATGCTGACATAG+GGG	-	chr7_3:54784300-54784319	Msa1110190:intron	40.0%
!!	TGACATAGGGGTATTAATGC+CGG	-	chr7_3:54784312-54784331	Msa1110190:intron	40.0%
	CTATTGTGATGAGCATTCTC+CGG	+	chr7_3:54784334-54784353	None:intergenic	40.0%
	TTCCATTTGATCGGAAAGAG+AGG	-	chr7_3:54784477-54784496	Msa1110190:intron	40.0%
	TCCATTTGATCGGAAAGAGA+GGG	-	chr7_3:54784478-54784497	Msa1110190:intron	40.0%
	CAAACCCCTTCATTTCTGTT+TGG	-	chr7_3:54784568-54784587	Msa1110190:intron	40.0%
	ACGACCAAACAGAAATGAAG+GGG	+	chr7_3:54784575-54784594	None:intergenic	40.0%
	TGTAGGAGTAAAAAGAGGCA+GGG	-	chr7_3:54783187-54783206	Msa1110190:three_prime_UTR	40.0%
	GACAAATCAACTTGTGCTCT+TGG	+	chr7_3:54783287-54783306	None:intergenic	40.0%
	AGCTCATGAAGTTAAGCGAA+GGG	-	chr7_3:54783310-54783329	Msa1110190:three_prime_UTR	40.0%
	CGTAACCGAAATTTATGGGT+GGG	+	chr7_3:54783555-54783574	None:intergenic	40.0%
	ACGTAACCGAAATTTATGGG+TGG	+	chr7_3:54783556-54783575	None:intergenic	40.0%
!	TTTTCCAGTCAATGCGATCT+CGG	-	chr7_3:54783795-54783814	Msa1110190:CDS	40.0%
	ACCTGTCAACTATTCTTTCG+AGG	-	chr7_3:54783820-54783839	Msa1110190:CDS	40.0%
	TCCTCGAAAGAATAGTTGAC+AGG	+	chr7_3:54783824-54783843	None:intergenic	40.0%
	CAACAGCATCTTCAACTTCA+AGG	+	chr7_3:54783847-54783866	None:intergenic	40.0%
	GAAAAATCTACGTGCATCGA+TGG	-	chr7_3:54783917-54783936	Msa1110190:CDS	40.0%
	GATGACTATCTTGAAATGGG+AGG	-	chr7_3:54784058-54784077	Msa1110190:CDS	40.0%
	CCCAATAATTCAGAAAAGGG+TGG	+	chr7_3:54784163-54784182	None:intergenic	40.0%
	TGACGAAAAGGCTAAAAGTG+AGG	-	chr7_3:54784228-54784247	Msa1110190:intron	40.0%
	GCTAAAAGTGAGGTACAAGA+TGG	-	chr7_3:54784238-54784257	Msa1110190:intron	40.0%
	AAAAGTGAGGTACAAGATGG+AGG	-	chr7_3:54784241-54784260	Msa1110190:intron	40.0%
	AAAGTGAGGTACAAGATGGA+GGG	-	chr7_3:54784242-54784261	Msa1110190:intron	40.0%
	GCATTTAGAAGCTGGTCATT+TGG	+	chr7_3:54784292-54784311	None:intergenic	40.0%
	CTATGTCAGCATTTAGAAGC+TGG	+	chr7_3:54784300-54784319	None:intergenic	40.0%
	CAGCTTCTAAATGCTGACAT+AGG	-	chr7_3:54784298-54784317	Msa1110190:intron	40.0%
	GCTTCTAAATGCTGACATAG+GGG	-	chr7_3:54784300-54784319	Msa1110190:intron	40.0%
!!	TGACATAGGGGTATTAATGC+CGG	-	chr7_3:54784312-54784331	Msa1110190:intron	40.0%
	CTATTGTGATGAGCATTCTC+CGG	+	chr7_3:54784334-54784353	None:intergenic	40.0%
	TTCCATTTGATCGGAAAGAG+AGG	-	chr7_3:54784477-54784496	Msa1110190:intron	40.0%
	TCCATTTGATCGGAAAGAGA+GGG	-	chr7_3:54784478-54784497	Msa1110190:intron	40.0%
	CAAACCCCTTCATTTCTGTT+TGG	-	chr7_3:54784568-54784587	Msa1110190:intron	40.0%
	ACGACCAAACAGAAATGAAG+GGG	+	chr7_3:54784575-54784594	None:intergenic	40.0%
	GTGTAGGAGTAAAAAGAGGC+AGG	-	chr7_3:54783186-54783205	Msa1110190:three_prime_UTR	45.0%
	CAGCTCATGAAGTTAAGCGA+AGG	-	chr7_3:54783309-54783328	Msa1110190:three_prime_UTR	45.0%
	TCCCACCCACCCATAAATTT+CGG	-	chr7_3:54783547-54783566	Msa1110190:three_prime_UTR	45.0%
	ACCGAAATTTATGGGTGGGT+GGG	+	chr7_3:54783551-54783570	None:intergenic	45.0%
	AACCGAAATTTATGGGTGGG+TGG	+	chr7_3:54783552-54783571	None:intergenic	45.0%
!	TCCTCTGAAGGATAACTTGC+CGG	-	chr7_3:54783976-54783995	Msa1110190:CDS	45.0%
	GACTATCTTGAAATGGGAGG+TGG	-	chr7_3:54784061-54784080	Msa1110190:CDS	45.0%
	CTGTGTAGACGATAGTGAGA+TGG	-	chr7_3:54784087-54784106	Msa1110190:CDS	45.0%
	AAGTGAGGTACAAGATGGAG+GGG	-	chr7_3:54784243-54784262	Msa1110190:intron	45.0%
	CTGGTCATTTGGCAGTTTGT+TGG	+	chr7_3:54784281-54784300	None:intergenic	45.0%
	TTCCAATTGGGATGTTCCTG+TGG	-	chr7_3:54784523-54784542	Msa1110190:intron	45.0%
	TCCAATTGGGATGTTCCTGT+GGG	-	chr7_3:54784524-54784543	Msa1110190:intron	45.0%
	ACGTGCAATGGGTCTAACTT+GGG	+	chr7_3:54784633-54784652	None:intergenic	45.0%
	TACGTGCAATGGGTCTAACT+TGG	+	chr7_3:54784634-54784653	None:intergenic	45.0%
	AAGTTAGACCCATTGCACGT+AGG	-	chr7_3:54784633-54784652	Msa1110190:intron	45.0%
	GGAATCATCCTACGTGCAAT+GGG	+	chr7_3:54784644-54784663	None:intergenic	45.0%
	TGGAATCATCCTACGTGCAA+TGG	+	chr7_3:54784645-54784664	None:intergenic	45.0%
!	AAAAACTCAAGGGCGCGTAT+TGG	-	chr7_3:54784705-54784724	Msa1110190:CDS	45.0%
!	AAAACTCAAGGGCGCGTATT+GGG	-	chr7_3:54784706-54784725	Msa1110190:CDS	45.0%
	GTGTAGGAGTAAAAAGAGGC+AGG	-	chr7_3:54783186-54783205	Msa1110190:three_prime_UTR	45.0%
	CAGCTCATGAAGTTAAGCGA+AGG	-	chr7_3:54783309-54783328	Msa1110190:three_prime_UTR	45.0%
	TCCCACCCACCCATAAATTT+CGG	-	chr7_3:54783547-54783566	Msa1110190:three_prime_UTR	45.0%
	ACCGAAATTTATGGGTGGGT+GGG	+	chr7_3:54783551-54783570	None:intergenic	45.0%
	AACCGAAATTTATGGGTGGG+TGG	+	chr7_3:54783552-54783571	None:intergenic	45.0%
!	TCCTCTGAAGGATAACTTGC+CGG	-	chr7_3:54783976-54783995	Msa1110190:CDS	45.0%
	GACTATCTTGAAATGGGAGG+TGG	-	chr7_3:54784061-54784080	Msa1110190:CDS	45.0%
	CTGTGTAGACGATAGTGAGA+TGG	-	chr7_3:54784087-54784106	Msa1110190:CDS	45.0%
	AAGTGAGGTACAAGATGGAG+GGG	-	chr7_3:54784243-54784262	Msa1110190:intron	45.0%
	CTGGTCATTTGGCAGTTTGT+TGG	+	chr7_3:54784281-54784300	None:intergenic	45.0%
	TTCCAATTGGGATGTTCCTG+TGG	-	chr7_3:54784523-54784542	Msa1110190:intron	45.0%
	TCCAATTGGGATGTTCCTGT+GGG	-	chr7_3:54784524-54784543	Msa1110190:intron	45.0%
	ACGTGCAATGGGTCTAACTT+GGG	+	chr7_3:54784633-54784652	None:intergenic	45.0%
	TACGTGCAATGGGTCTAACT+TGG	+	chr7_3:54784634-54784653	None:intergenic	45.0%
	AAGTTAGACCCATTGCACGT+AGG	-	chr7_3:54784633-54784652	Msa1110190:intron	45.0%
	GGAATCATCCTACGTGCAAT+GGG	+	chr7_3:54784644-54784663	None:intergenic	45.0%
	TGGAATCATCCTACGTGCAA+TGG	+	chr7_3:54784645-54784664	None:intergenic	45.0%
!	AAAAACTCAAGGGCGCGTAT+TGG	-	chr7_3:54784705-54784724	Msa1110190:CDS	45.0%
!	AAAACTCAAGGGCGCGTATT+GGG	-	chr7_3:54784706-54784725	Msa1110190:CDS	45.0%
!!	TTAAATAGTAAATAAATAAA+AGG	-	chr7_3:54783751-54783770	Msa1110190:CDS	5.0%
!!!	TTATACTTTTTTTTTTTTTA+AGG	+	chr7_3:54784778-54784797	None:intergenic	5.0%
!!	TTAAATAGTAAATAAATAAA+AGG	-	chr7_3:54783751-54783770	Msa1110190:CDS	5.0%
!!!	TTATACTTTTTTTTTTTTTA+AGG	+	chr7_3:54784778-54784797	None:intergenic	5.0%
	AAAAAAAGTAGCCGTGGGCG+AGG	-	chr7_3:54783152-54783171	Msa1110190:three_prime_UTR	50.0%
!	CGAGGAAGAGGTAAAGGTGT+AGG	-	chr7_3:54783170-54783189	Msa1110190:three_prime_UTR	50.0%
!	GTTTCCGAGATCGCATTGAC+TGG	+	chr7_3:54783802-54783821	None:intergenic	50.0%
!	TGCATCGATGGTTCCAGCAT+AGG	-	chr7_3:54783929-54783948	Msa1110190:CDS	50.0%
!	GCATCGATGGTTCCAGCATA+GGG	-	chr7_3:54783930-54783949	Msa1110190:CDS	50.0%
	ACTGCTGTCTTTCCCTATGC+TGG	+	chr7_3:54783945-54783964	None:intergenic	50.0%
!	TAACTTGCCGGCAGACTATC+TGG	-	chr7_3:54783988-54784007	Msa1110190:CDS	50.0%
	TCTTGCTCCAGATAGTCTGC+CGG	+	chr7_3:54783998-54784017	None:intergenic	50.0%
	CTGGAGCAAGAAACAGATGC+TGG	-	chr7_3:54784007-54784026	Msa1110190:CDS	50.0%
	TCATCTGAAGGGTGAGTCCT+TGG	+	chr7_3:54784043-54784062	None:intergenic	50.0%
	CATCGCGCTAAAAGCTACGT+TGG	+	chr7_3:54784365-54784384	None:intergenic	50.0%
!!!	TTAGCGCGATGCCGTTTTTG+AGG	-	chr7_3:54784374-54784393	Msa1110190:intron	50.0%
	GCCCTCTCTTTCCGATCAAA+TGG	+	chr7_3:54784482-54784501	None:intergenic	50.0%
	ACCCACAGGAACATCCCAAT+TGG	+	chr7_3:54784528-54784547	None:intergenic	50.0%
	CGTGCAATGGGTCTAACTTG+GGG	+	chr7_3:54784632-54784651	None:intergenic	50.0%
!	AAACTCAAGGGCGCGTATTG+GGG	-	chr7_3:54784707-54784726	Msa1110190:CDS	50.0%
	AAAAAAAGTAGCCGTGGGCG+AGG	-	chr7_3:54783152-54783171	Msa1110190:three_prime_UTR	50.0%
!	CGAGGAAGAGGTAAAGGTGT+AGG	-	chr7_3:54783170-54783189	Msa1110190:three_prime_UTR	50.0%
!	GTTTCCGAGATCGCATTGAC+TGG	+	chr7_3:54783802-54783821	None:intergenic	50.0%
!	TGCATCGATGGTTCCAGCAT+AGG	-	chr7_3:54783929-54783948	Msa1110190:CDS	50.0%
!	GCATCGATGGTTCCAGCATA+GGG	-	chr7_3:54783930-54783949	Msa1110190:CDS	50.0%
	ACTGCTGTCTTTCCCTATGC+TGG	+	chr7_3:54783945-54783964	None:intergenic	50.0%
!	TAACTTGCCGGCAGACTATC+TGG	-	chr7_3:54783988-54784007	Msa1110190:CDS	50.0%
	TCTTGCTCCAGATAGTCTGC+CGG	+	chr7_3:54783998-54784017	None:intergenic	50.0%
	CTGGAGCAAGAAACAGATGC+TGG	-	chr7_3:54784007-54784026	Msa1110190:CDS	50.0%
	TCATCTGAAGGGTGAGTCCT+TGG	+	chr7_3:54784043-54784062	None:intergenic	50.0%
	CATCGCGCTAAAAGCTACGT+TGG	+	chr7_3:54784365-54784384	None:intergenic	50.0%
!!!	TTAGCGCGATGCCGTTTTTG+AGG	-	chr7_3:54784374-54784393	Msa1110190:intron	50.0%
	GCCCTCTCTTTCCGATCAAA+TGG	+	chr7_3:54784482-54784501	None:intergenic	50.0%
	ACCCACAGGAACATCCCAAT+TGG	+	chr7_3:54784528-54784547	None:intergenic	50.0%
	CGTGCAATGGGTCTAACTTG+GGG	+	chr7_3:54784632-54784651	None:intergenic	50.0%
!	AAACTCAAGGGCGCGTATTG+GGG	-	chr7_3:54784707-54784726	Msa1110190:CDS	50.0%
	CTTTACCTCTTCCTCGCCCA+CGG	+	chr7_3:54783166-54783185	None:intergenic	55.0%
	GCCGGCAAGTTATCCTTCAG+AGG	+	chr7_3:54783980-54783999	None:intergenic	55.0%
	ATGCTGGTGCAGCAACACCA+AGG	-	chr7_3:54784023-54784042	Msa1110190:CDS	55.0%
!	AAGAGAGGGCTGTGCTGACA+TGG	-	chr7_3:54784492-54784511	Msa1110190:intron	55.0%
	CTTTACCTCTTCCTCGCCCA+CGG	+	chr7_3:54783166-54783185	None:intergenic	55.0%
	GCCGGCAAGTTATCCTTCAG+AGG	+	chr7_3:54783980-54783999	None:intergenic	55.0%
	ATGCTGGTGCAGCAACACCA+AGG	-	chr7_3:54784023-54784042	Msa1110190:CDS	55.0%
!	AAGAGAGGGCTGTGCTGACA+TGG	-	chr7_3:54784492-54784511	Msa1110190:intron	55.0%
	CGTGGGCGAGGAAGAGGTAA+AGG	-	chr7_3:54783164-54783183	Msa1110190:three_prime_UTR	60.0%
!	AGAGGGCTGTGCTGACATGG+TGG	-	chr7_3:54784495-54784514	Msa1110190:intron	60.0%
	CGTGGGCGAGGAAGAGGTAA+AGG	-	chr7_3:54783164-54783183	Msa1110190:three_prime_UTR	60.0%
!	AGAGGGCTGTGCTGACATGG+TGG	-	chr7_3:54784495-54784514	Msa1110190:intron	60.0%
	AGTAGCCGTGGGCGAGGAAG+AGG	-	chr7_3:54783158-54783177	Msa1110190:three_prime_UTR	65.0%
!	CTCAAGGGCGCGTATTGGGG+TGG	-	chr7_3:54784710-54784729	Msa1110190:CDS	65.0%
	AGTAGCCGTGGGCGAGGAAG+AGG	-	chr7_3:54783158-54783177	Msa1110190:three_prime_UTR	65.0%
!	CTCAAGGGCGCGTATTGGGG+TGG	-	chr7_3:54784710-54784729	Msa1110190:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr7_3	gene	54783131	54784856	54783131	ID=Msa1110190;Name=Msa1110190
chr7_3	mRNA	54783131	54784856	54783131	ID=Msa1110190-mRNA-1;Parent=Msa1110190;Name=Msa1110190-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0\|1\|0.5\|1\|1\|0.5\|2\|442\|270
chr7_3	exon	54783131	54784184	54783131	ID=Msa1110190-mRNA-1:exon:11540;Parent=Msa1110190-mRNA-1
chr7_3	exon	54784656	54784856	54784656	ID=Msa1110190-mRNA-1:exon:11539;Parent=Msa1110190-mRNA-1
chr7_3	CDS	54784656	54784856	54784656	ID=Msa1110190-mRNA-1:cds;Parent=Msa1110190-mRNA-1
chr7_3	CDS	54783573	54784184	54783573	ID=Msa1110190-mRNA-1:cds;Parent=Msa1110190-mRNA-1
chr7_3	three_prime_UTR	54783131	54783572	54783131	ID=Msa1110190-mRNA-1:three_prime_utr;Parent=Msa1110190-mRNA-1

Gene Sequence

>Msa1110190

ATGGTGAGGATTTGGTTCAGAAAAAAAAGTAGCCGTGGGCGAGGAAGAGGTAAAGGTGTAGGAGTAAAAAGAGGCAGGGAGAAGAAAAGTCGTCAATTTCAACCGTCTGAAACTGAAACATCATCTAGTAGTCTCGATATTGACAATCATGAGCCAAGAGCACAAGTTGATTTGTCAACAGCTCATGAAGTTAAGCGAAGGTCAATGCGATCTCGGAAACCTGTCAACTATTCTTTCGAGGACCTTGAAGTTGAAGATGCTGTTGATTCATTTGATCAGAGCAATCAGAAATGCTTGCGTCAAGAGCTAGTAGAAGAAAAATCTACGTGCATCGATGGTTCCAGCATAGGGAAAGACAGCAGTATGCTAGAAATTCCTCTGAAGGATAACTTGCCGGCAGACTATCTGGAGCAAGAAACAGATGCTGGTGCAGCAACACCAAGGACTCACCCTTCAGATGACTATCTTGAAATGGGAGGTGGATTCTGTGTAGACGATAGTGAGATGGATAACAACCATGATGCAATTGATGATATGAACACTAGTTCTGCAAACTCTCCACCCTTTTCTGAATTATTGGGTGAAACCGATCGTGATAAAAGTAGTTCAGATATATTATTTTTGGGTGACGAAAAGGCTAAAAGTGAGGTACAAGATGGAGGGGCATGTAAAAACTCCAACAAACTGCCAAATGACCAGCTTCTAAATGCTGACATAGGGGTATTAATGCCGGAGAATGCTCATCACAATAGTGAGAGCTCCAACGTAGCTTTTAGCGCGATGCCGTTTTTGAGGAAGAAAAGAAAGAAATGA

Protein sequence

>Msa1110190

MVRIWFRKKSSRGRGRGKGVGVKRGREKKSRQFQPSETETSSSSLDIDNHEPRAQVDLSTAHEVKRRSMRSRKPVNYSFEDLEVEDAVDSFDQSNQKCLRQELVEEKSTCIDGSSIGKDSSMLEIPLKDNLPADYLEQETDAGAATPRTHPSDDYLEMGGGFCVDDSEMDNNHDAIDDMNTSSANSPPFSELLGETDRDKSSSDILFLGDEKAKSEVQDGGACKNSNKLPNDQLLNADIGVLMPENAHHNSESSNVAFSAMPFLRKKRKK*