AlfalfaGEDB | Msa1408760

M. sativa cultivar zhongmu-4 / Msa1408760

KEGG: K09008
GO: -
PFAM: PF04430.17

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1408760	XP_013443964.1	94.413	179	8	2	1	179	1	177	9.16e-118	341

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1408760	sp\|Q6DFN1\|NDUF3_XENTR	35.780	109	70	0	66	174	66	174	8.80e-21	87.4

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1408760	B7FHB1	94.413	179	8	2	1	179	1	177	4.38e-118	341

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0000550	Msa1408760	0.845461	4.003663e-59	-8.615850e-47
Msa0022750	Msa1408760	0.820896	5.381964e-53	-8.615850e-47
Msa0032320	Msa1408760	-0.801853	7.399850e-49	-8.615850e-47
Msa0032370	Msa1408760	-0.805911	1.061821e-49	-8.615850e-47
Msa0032840	Msa1408760	0.802829	4.658119e-49	-8.615850e-47
Msa0048000	Msa1408760	-0.833200	6.113293e-56	-8.615850e-47
Msa0050730	Msa1408760	-0.815889	7.336743e-52	-8.615850e-47
Msa0050760	Msa1408760	-0.829630	4.623902e-55	-8.615850e-47
Msa0104610	Msa1408760	-0.801491	8.782858e-49	-8.615850e-47
Msa0114540	Msa1408760	0.841436	4.758580e-58	-8.615850e-47
Msa0120040	Msa1408760	0.821360	4.208687e-53	-8.615850e-47
Msa1360890	Msa1408760	0.813419	2.584290e-51	-8.615850e-47
Msa1362480	Msa1408760	0.823425	1.394527e-53	-8.615850e-47
Msa1362510	Msa1408760	-0.826086	3.289534e-54	-8.615850e-47
Msa1363890	Msa1408760	-0.801842	7.438937e-49	-8.615850e-47
Msa1376090	Msa1408760	0.802536	5.355035e-49	-8.615850e-47
Msa1390310	Msa1408760	-0.802730	4.883739e-49	-8.615850e-47
Msa1398860	Msa1408760	-0.836553	8.749076e-57	-8.615850e-47
Msa1402270	Msa1408760	-0.807685	4.479881e-50	-8.615850e-47
Msa1403580	Msa1408760	0.808619	2.833121e-50	-8.615850e-47
Msa1404540	Msa1408760	-0.837257	5.784058e-57	-8.615850e-47
Msa1408760	Msa1422840	-0.822834	1.915594e-53	-8.615850e-47
Msa1408760	Msa1429360	0.800137	1.659726e-48	-8.615850e-47
Msa1408760	Msa1431060	-0.837640	4.614559e-57	-8.615850e-47
Msa1408760	Msa1440600	-0.828769	7.479048e-55	-8.615850e-47
Msa1408760	Msa1442220	0.825831	3.782533e-54	-8.615850e-47
Msa1408760	Msa1443290	0.804332	2.272837e-49	-8.615850e-47
Msa1408760	Msa1457430	-0.809525	1.812374e-50	-8.615850e-47
Msa1408760	Msa1459180	-0.808658	2.780125e-50	-8.615850e-47
Msa0657460	Msa1408760	0.806646	7.436436e-50	-8.615850e-47
Msa0693380	Msa1408760	-0.808186	3.505484e-50	-8.615850e-47
Msa0735620	Msa1408760	0.814945	1.189327e-51	-8.615850e-47
Msa0744090	Msa1408760	-0.803099	4.097384e-49	-8.615850e-47
Msa0754720	Msa1408760	0.844783	6.103212e-59	-8.615850e-47
Msa0756630	Msa1408760	0.839973	1.149709e-57	-8.615850e-47
Msa0784620	Msa1408760	-0.804266	2.345778e-49	-8.615850e-47
Msa0790390	Msa1408760	0.816796	4.598196e-52	-8.615850e-47
Msa0793140	Msa1408760	0.805324	1.410048e-49	-8.615850e-47
Msa0814630	Msa1408760	0.811094	8.313425e-51	-8.615850e-47
Msa0825280	Msa1408760	-0.810039	1.405467e-50	-8.615850e-47
Msa0829620	Msa1408760	-0.805257	1.456448e-49	-8.615850e-47
Msa0836500	Msa1408760	-0.803037	4.219577e-49	-8.615850e-47
Msa0124340	Msa1408760	-0.803782	2.957878e-49	-8.615850e-47
Msa0138970	Msa1408760	0.805622	1.221535e-49	-8.615850e-47
Msa0142470	Msa1408760	-0.805513	1.287112e-49	-8.615850e-47
Msa0143380	Msa1408760	-0.815110	1.093372e-51	-8.615850e-47
Msa0172350	Msa1408760	-0.807163	5.779763e-50	-8.615850e-47
Msa0188680	Msa1408760	0.810231	1.277298e-50	-8.615850e-47
Msa0191250	Msa1408760	-0.802091	6.612764e-49	-8.615850e-47
Msa0198530	Msa1408760	-0.805592	1.239381e-49	-8.615850e-47
Msa0210250	Msa1408760	-0.805340	1.399804e-49	-8.615850e-47
Msa0227230	Msa1408760	-0.809733	1.635612e-50	-8.615850e-47
Msa0230550	Msa1408760	0.800782	1.226474e-48	-8.615850e-47
Msa1224830	Msa1408760	-0.809041	2.301631e-50	-8.615850e-47
Msa1246530	Msa1408760	0.806705	7.225449e-50	-8.615850e-47
Msa1269580	Msa1408760	0.804248	2.366694e-49	-8.615850e-47
Msa1300860	Msa1408760	-0.820476	6.723592e-53	-8.615850e-47
Msa1318240	Msa1408760	-0.808157	3.555138e-50	-8.615850e-47
Msa1329670	Msa1408760	-0.807456	5.010139e-50	-8.615850e-47
Msa1331910	Msa1408760	-0.819764	9.784512e-53	-8.615850e-47
Msa1331920	Msa1408760	-0.827127	1.857312e-54	-8.615850e-47
Msa0410300	Msa1408760	-0.807942	3.950628e-50	-8.615850e-47
Msa0412440	Msa1408760	-0.824129	9.539156e-54	-8.615850e-47
Msa0419640	Msa1408760	0.827461	1.544959e-54	-8.615850e-47
Msa0428170	Msa1408760	-0.819624	1.053090e-52	-8.615850e-47
Msa0436280	Msa1408760	0.803042	4.209468e-49	-8.615850e-47
Msa0449820	Msa1408760	-0.803333	3.664551e-49	-8.615850e-47
Msa0456910	Msa1408760	-0.843414	1.421778e-58	-8.615850e-47
Msa0458440	Msa1408760	-0.802323	5.925028e-49	-8.615850e-47
Msa0461590	Msa1408760	-0.815596	8.526806e-52	-8.615850e-47
Msa0464900	Msa1408760	-0.813783	2.149098e-51	-8.615850e-47
Msa0469910	Msa1408760	0.803226	3.856438e-49	-8.615850e-47
Msa1010070	Msa1408760	-0.802740	4.860339e-49	-8.615850e-47
Msa1032170	Msa1408760	-0.818128	2.303517e-52	-8.615850e-47
Msa1037650	Msa1408760	0.844827	5.938454e-59	-8.615850e-47
Msa1056460	Msa1408760	-0.805997	1.018709e-49	-8.615850e-47
Msa1068200	Msa1408760	0.801295	9.629875e-49	-8.615850e-47
Msa1078710	Msa1408760	-0.803507	3.372913e-49	-8.615850e-47
Msa1080160	Msa1408760	-0.822175	2.726680e-53	-8.615850e-47
Msa1087510	Msa1408760	0.951330	2.566551e-109	-8.615850e-47
Msa0239940	Msa1408760	-0.805139	1.541708e-49	-8.615850e-47
Msa0250670	Msa1408760	-0.827704	1.350728e-54	-8.615850e-47
Msa0259270	Msa1408760	-0.816478	5.417132e-52	-8.615850e-47
Msa0260810	Msa1408760	-0.837036	6.585530e-57	-8.615850e-47
Msa0267870	Msa1408760	-0.839559	1.473846e-57	-8.615850e-47
Msa0270220	Msa1408760	0.807903	4.027242e-50	-8.615850e-47
Msa0275400	Msa1408760	0.831919	1.270271e-55	-8.615850e-47
Msa0276920	Msa1408760	-0.803815	2.911573e-49	-8.615850e-47
Msa0289400	Msa1408760	-0.831580	1.539785e-55	-8.615850e-47
Msa0299730	Msa1408760	-0.814599	1.419214e-51	-8.615850e-47
Msa0307830	Msa1408760	0.810379	1.187143e-50	-8.615850e-47
Msa0311860	Msa1408760	-0.812155	4.888754e-51	-8.615850e-47
Msa0317730	Msa1408760	-0.810835	9.461727e-51	-8.615850e-47
Msa0327410	Msa1408760	-0.843883	1.065482e-58	-8.615850e-47
Msa0334040	Msa1408760	-0.820767	5.762260e-53	-8.615850e-47
Msa0343190	Msa1408760	-0.811733	6.041092e-51	-8.615850e-47
Msa1113590	Msa1408760	-0.802447	5.586931e-49	-8.615850e-47
Msa1130210	Msa1408760	0.803010	4.275603e-49	-8.615850e-47
Msa1130270	Msa1408760	0.843514	1.337421e-58	-8.615850e-47
Msa1133710	Msa1408760	-0.800374	1.485430e-48	-8.615850e-47
Msa1143620	Msa1408760	-0.804273	2.337724e-49	-8.615850e-47
Msa1145250	Msa1408760	0.800855	1.185074e-48	-8.615850e-47
Msa1163650	Msa1408760	0.803955	2.722253e-49	-8.615850e-47
Msa1174850	Msa1408760	-0.802799	4.725551e-49	-8.615850e-47
Msa1193950	Msa1408760	0.802517	5.402626e-49	-8.615850e-47
Msa1211050	Msa1408760	0.945751	1.695330e-104	-8.615850e-47
Msa1214880	Msa1408760	-0.830614	2.658930e-55	-8.615850e-47
Msa1214890	Msa1408760	-0.804153	2.476305e-49	-8.615850e-47
Msa1218280	Msa1408760	0.800272	1.558190e-48	-8.615850e-47
Msa0505060	Msa1408760	-0.803437	3.487606e-49	-8.615850e-47
Msa0547400	Msa1408760	-0.808133	3.598049e-50	-8.615850e-47
Msa0565620	Msa1408760	0.817880	2.621283e-52	-8.615850e-47
Msa0602120	Msa1408760	-0.802316	5.943422e-49	-8.615850e-47
Msa0851470	Msa1408760	-0.808245	3.404648e-50	-8.615850e-47
Msa0855160	Msa1408760	0.823930	1.062129e-53	-8.615850e-47
Msa0881580	Msa1408760	-0.812096	5.035007e-51	-8.615850e-47
Msa0882510	Msa1408760	-0.812504	4.101998e-51	-8.615850e-47
Msa0891600	Msa1408760	0.805360	1.386260e-49	-8.615850e-47
Msa0893810	Msa1408760	-0.804151	2.478995e-49	-8.615850e-47
Msa0908170	Msa1408760	-0.830696	2.539398e-55	-8.615850e-47
Msa0933230	Msa1408760	-0.800182	1.624855e-48	-8.615850e-47
Msa0957970	Msa1408760	-0.801358	9.348145e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1408760	MtrunA17_Chr8g0337221	94.413	179	8	2	1	179	1	177	8.42e-122	341

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1408760	AT2G44525.1	72.626	179	40	2	1	179	1	170	4.11e-92	266
Msa1408760	AT3G60150.1	71.508	179	42	2	1	179	1	170	1.84e-89	259
Msa1408760	AT3G60150.4	65.789	152	43	2	1	152	1	143	2.03e-68	205
Msa1408760	AT3G60150.2	67.619	105	25	2	1	105	1	96	9.84e-44	142
Msa1408760	AT3G60150.3	67.619	105	25	2	1	105	1	96	9.84e-44	142

Find 70 sgRNAs with CRISPR-Local

Find 294 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACTTCTTGTTGTGTTGTTTC+TGG	0.118738	tig0023416:+18799	None:intergenic
GATACTGGATTTACTGTAAA+TGG	0.188286	tig0023416:-18138	Msa1408760:CDS
TTGCCAGAGATTCTGATTAT+TGG	0.198809	tig0023416:-16184	Msa1408760:intron
ATTTCTTCAATATTACTATT+AGG	0.241598	tig0023416:-14639	Msa1408760:three_prime_UTR
AATACTCTCTTCCAAATTAA+TGG	0.249280	tig0023416:+14481	None:intergenic
AACAAGAAGTTCGTGGGTTT+GGG	0.250066	tig0023416:-18786	Msa1408760:five_prime_UTR
GTATGTAATTGCCATTAATT+TGG	0.261720	tig0023416:-14492	Msa1408760:three_prime_UTR
TATTGTAGGTTTAAAGATAC+TGG	0.279697	tig0023416:-18153	Msa1408760:intron
CAACAAGAAGTTCGTGGGTT+TGG	0.292786	tig0023416:-18787	Msa1408760:five_prime_UTR
CAAATTGTCCGCCCTATTCC+AGG	0.322257	tig0023416:-16694	Msa1408760:intron
ACGGAGAGAGGGCAAGGAAT+TGG	0.326466	tig0023416:+18627	None:intergenic
GTGATCTCTGAAAACTTGTT+TGG	0.331729	tig0023416:+18060	None:intergenic
CGTTGCGGAGATTGCGTATG+AGG	0.347381	tig0023416:+18695	None:intergenic
CTGAACTTAGACGGTTTATT+CGG	0.349745	tig0023416:-16132	Msa1408760:CDS
TATTGTCACTTCTGATTACT+TGG	0.357811	tig0023416:-14462	Msa1408760:three_prime_UTR
CTTGTTGTGTTGTTTCTGGA+TGG	0.358546	tig0023416:+18803	None:intergenic
TGAAAACGGAGTTGGTCTTC+GGG	0.364676	tig0023416:+18559	None:intergenic
TTGAAAACGGAGTTGGTCTT+CGG	0.366792	tig0023416:+18558	None:intergenic
CGGAGAGAGGGCAAGGAATT+GGG	0.376081	tig0023416:+18628	None:intergenic
CGGAGATTGCGTATGAGGTT+TGG	0.390834	tig0023416:+18700	None:intergenic
CTAGAAAAGCCAACTTTGCT+TGG	0.400842	tig0023416:+14737	None:intergenic
TTTCAGAGATCACTGCTGAT+AGG	0.414377	tig0023416:-18050	Msa1408760:intron
CTTCATGAAGTAACTCCATA+TGG	0.421691	tig0023416:+14990	None:intergenic
CTCATAAATCCAAGCAAAGT+TGG	0.431683	tig0023416:-14746	Msa1408760:three_prime_UTR
CGAATAAACCGTCTAAGTTC+AGG	0.439607	tig0023416:+16133	None:intergenic
TTGTTGTGTTGTTTCTGGAT+GGG	0.447509	tig0023416:+18804	None:intergenic
GCTGCCGCACTTCTTCCATA+TGG	0.447563	tig0023416:-15005	Msa1408760:CDS
TGGAGTTACTTCATGAAGCT+TGG	0.461189	tig0023416:-14985	Msa1408760:exon
AGACGGTTTATTCGGTCTAC+TGG	0.478171	tig0023416:-16124	Msa1408760:CDS
TTGGAAATTTGATCATGTCT+TGG	0.480044	tig0023416:-18086	Msa1408760:CDS
TGTGAGCATATTTGAACAAA+GGG	0.481813	tig0023416:+14942	None:intergenic
GTGTTGTTTCTGGATGGGTC+AGG	0.487465	tig0023416:+18809	None:intergenic
GAAGGAAGTTTGCTTTGTGT+TGG	0.489361	tig0023416:-18105	Msa1408760:CDS
GTTTAACATCCCCAAGGGAG+GGG	0.495721	tig0023416:+14596	None:intergenic
TTTAACATCCCCAAGGGAGG+GGG	0.498649	tig0023416:+14597	None:intergenic
AGCGCGACGGAGAGAGGGCA+AGG	0.502973	tig0023416:+18621	None:intergenic
GAGAAAGCGCGACGGAGAGA+GGG	0.509976	tig0023416:+18616	None:intergenic
GAGATTCTGATTATTGGCTG+TGG	0.521779	tig0023416:-16178	Msa1408760:CDS
GAAGGTTTGTTGAGCTTGAG+AGG	0.526353	tig0023416:+18667	None:intergenic
TTCTGATTATTGGCTGTGGA+AGG	0.533781	tig0023416:-16174	Msa1408760:CDS
TGTTTAACATCCCCAAGGGA+GGG	0.533926	tig0023416:+14595	None:intergenic
AGAGAAAGCGCGACGGAGAG+AGG	0.539475	tig0023416:+18615	None:intergenic
ATGTTGATCCTGAACTTAGA+CGG	0.540665	tig0023416:-16141	Msa1408760:CDS
AGAGTAGGTACCCTTGAAAA+CGG	0.541466	tig0023416:+18545	None:intergenic
GTAAATGGAGTTGAATATGA+AGG	0.545158	tig0023416:-18123	Msa1408760:CDS
GGATGATTGTTATGTGGAGA+AGG	0.556995	tig0023416:+18649	None:intergenic
GTCACAACTCTAACAAAATG+AGG	0.560227	tig0023416:+14678	None:intergenic
TACAACATACTAAATGAAGA+AGG	0.562312	tig0023416:-15038	Msa1408760:CDS
CAACACAACAAGAAGTTCGT+GGG	0.568412	tig0023416:-18792	Msa1408760:five_prime_UTR
GCTTGAGAGGTTGTTCGTTG+CGG	0.572374	tig0023416:+18680	None:intergenic
ATGTGAGCATATTTGAACAA+AGG	0.581253	tig0023416:+14941	None:intergenic
GTCGTTGTGTTCGATAAAGA+CGG	0.583295	tig0023416:-18846	None:intergenic
GAATTGGGATGATTGTTATG+TGG	0.592998	tig0023416:+18643	None:intergenic
ATGTTTAACATCCCCAAGGG+AGG	0.599914	tig0023416:+14594	None:intergenic
ACAACACAACAAGAAGTTCG+TGG	0.601920	tig0023416:-18793	Msa1408760:five_prime_UTR
TTAACATCCCCAAGGGAGGG+GGG	0.609343	tig0023416:+14598	None:intergenic
GGTACCCTTGAAAACGGAGT+TGG	0.609702	tig0023416:+18551	None:intergenic
TGAAATCTTGCGTAAATCTG+CGG	0.610671	tig0023416:-14908	Msa1408760:three_prime_UTR
ATAAATGTTTAACATCCCCA+AGG	0.614861	tig0023416:+14590	None:intergenic
GAAAACGGAGTTGGTCTTCG+GGG	0.618386	tig0023416:+18560	None:intergenic
ACAAGAAGTTCGTGGGTTTG+GGG	0.622996	tig0023416:-18785	Msa1408760:five_prime_UTR
GAAGTTAGAAGCTGTTGACT+CGG	0.627184	tig0023416:-16098	Msa1408760:intron
AGGGTGGCTACTAAGAGTAT+AGG	0.645956	tig0023416:+14961	None:intergenic
CGTATAAAGAGAAAGCGCGA+CGG	0.654869	tig0023416:+18608	None:intergenic
TTTGAAAACATCAACAGACA+TGG	0.662637	tig0023416:+14812	None:intergenic
GAGCATATTTGAACAAAGGG+TGG	0.666943	tig0023416:+14945	None:intergenic
TAAATGTTTAACATCCCCAA+GGG	0.679311	tig0023416:+14591	None:intergenic
AACTCCATATGGAAGAAGTG+CGG	0.679978	tig0023416:+15001	None:intergenic
AAATCCAACCTGGAATAGGG+CGG	0.690412	tig0023416:+16686	None:intergenic
AAATGAAGAAGGTCGCATTG+TGG	0.696515	tig0023416:-15027	Msa1408760:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTTTTAGTTAGTTTTTATA+TGG	-	tig0023416:14845-14864	Msa1408760:three_prime_UTR	10.0%
!!!	GATTTTTTTATTTAATGTAA+TGG	-	tig0023416:15043-15062	Msa1408760:CDS	10.0%
!!	AAAAAAAAAAAAATAATGCA+AGG	+	tig0023416:17264-17283	None:intergenic	10.0%
!!!	TCAATATATTTTTGAATTTA+TGG	-	tig0023416:18739-18758	Msa1408760:exon	10.0%
!!	AAATAGAAATGATTATTATG+TGG	+	tig0023416:14786-14805	None:intergenic	15.0%
!!	AAAAGACTTTAATGTAAAAT+GGG	-	tig0023416:14877-14896	Msa1408760:three_prime_UTR	15.0%
!!!	TTTTACAAATATACTCTATA+AGG	+	tig0023416:15317-15336	None:intergenic	15.0%
!!!	AATTTAAAACCATTTAAAAG+TGG	+	tig0023416:15373-15392	None:intergenic	15.0%
!!!	AATTCAAATCATTTTGATAA+GGG	+	tig0023416:15801-15820	None:intergenic	15.0%
!!	ATGATCATATTAAAATATCA+TGG	+	tig0023416:16105-16124	None:intergenic	15.0%
!!!	CTATAAAATGTTTCTAAAAA+AGG	+	tig0023416:16151-16170	None:intergenic	15.0%
!!	TAGTTTCTAAATTATAAGTT+AGG	-	tig0023416:16835-16854	Msa1408760:intron	15.0%
!!!	AATATTTTTCTTTACATTGT+TGG	-	tig0023416:17289-17308	Msa1408760:intron	15.0%
!!!	ATATTTTTCTTTACATTGTT+GGG	-	tig0023416:17290-17309	Msa1408760:intron	15.0%
!!	ATTTCTTCAATATTACTATT+AGG	-	tig0023416:18654-18673	Msa1408760:CDS	15.0%
!!	GAAAAGACTTTAATGTAAAA+TGG	-	tig0023416:14876-14895	Msa1408760:three_prime_UTR	20.0%
!!	AATATACTCTATAAGGTAAA+AGG	+	tig0023416:15310-15329	None:intergenic	20.0%
!!	CAAACATTAAAGAAAACAAT+TGG	+	tig0023416:15340-15359	None:intergenic	20.0%
!!!	TAAATGGTTTTAAATTATCG+TGG	-	tig0023416:15377-15396	Msa1408760:intron	20.0%
!!!	TTAAAGTGGAAATTTTATCT+TGG	-	tig0023416:15651-15670	Msa1408760:intron	20.0%
!!!	TAAAGTGGAAATTTTATCTT+GGG	-	tig0023416:15652-15671	Msa1408760:intron	20.0%
!!!	CAATTCAAATCATTTTGATA+AGG	+	tig0023416:15802-15821	None:intergenic	20.0%
!!!	ATAAAGTTTTGTAATGTGTT+GGG	-	tig0023416:15910-15929	Msa1408760:intron	20.0%
!!	CAAACTCTTAAGAAAATTAT+AGG	+	tig0023416:15980-15999	None:intergenic	20.0%
!!!	AATTTTCTTAAGAGTTTGTT+TGG	-	tig0023416:15982-16001	Msa1408760:intron	20.0%
!!!	ATTTTCTTAAGAGTTTGTTT+GGG	-	tig0023416:15983-16002	Msa1408760:intron	20.0%
!!	AAAAAAATAGGATTTGGATT+TGG	+	tig0023416:16394-16413	None:intergenic	20.0%
!!	TTACACAAAAAAATAGGATT+TGG	+	tig0023416:16400-16419	None:intergenic	20.0%
!!	ATCTTGAATTGATATCTTAT+TGG	-	tig0023416:16540-16559	Msa1408760:intron	20.0%
!!	ATTCAAATAGGAAAAATCAA+AGG	+	tig0023416:16702-16721	None:intergenic	20.0%
!!	TAGAAAAGATAATTATACAC+GGG	+	tig0023416:16934-16953	None:intergenic	20.0%
!!	GTAGAAAAGATAATTATACA+CGG	+	tig0023416:16935-16954	None:intergenic	20.0%
!!	TAGATCAAAATCAATTTGAT+AGG	+	tig0023416:17063-17082	None:intergenic	20.0%
!!!	TATTTTTCTTTACATTGTTG+GGG	-	tig0023416:17291-17310	Msa1408760:intron	20.0%
!!	ATGGATCAAAATAAAATCAT+AGG	-	tig0023416:17716-17735	Msa1408760:intron	20.0%
!!!	TGATTGAAACATGATTTTAA+AGG	-	tig0023416:18057-18076	Msa1408760:CDS	20.0%
!	TGATTATTATGTGGAATGAA+AGG	+	tig0023416:14777-14796	None:intergenic	25.0%
!!	TTTCTTTCCATTTTGCAAAA+TGG	-	tig0023416:14805-14824	Msa1408760:three_prime_UTR	25.0%
!!	TTCTTTCCATTTTGCAAAAT+GGG	-	tig0023416:14806-14825	Msa1408760:three_prime_UTR	25.0%
!!	TAGTTTTTATATGGTGTTCA+AGG	-	tig0023416:14854-14873	Msa1408760:three_prime_UTR	25.0%
!	CCAATAATTGTATTGTTGAA+GGG	-	tig0023416:14962-14981	Msa1408760:three_prime_UTR	25.0%
!	TTAACATGATTGTTTCGATA+TGG	-	tig0023416:14987-15006	Msa1408760:exon	25.0%
!	TAACATGATTGTTTCGATAT+GGG	-	tig0023416:14988-15007	Msa1408760:exon	25.0%
!!!	TGCTAAGATCATTGTTTTAT+CGG	-	tig0023416:15076-15095	Msa1408760:intron	25.0%
!!	ACTGATTTCAATGATATTGT+AGG	-	tig0023416:15126-15145	Msa1408760:intron	25.0%
!	TATTGTAGGTTTAAAGATAC+TGG	-	tig0023416:15140-15159	Msa1408760:intron	25.0%
!!	TTCATTTTGTATATCACCAT+TGG	-	tig0023416:15428-15447	Msa1408760:intron	25.0%
!	AATCAAATATCTTCTAGATC+TGG	-	tig0023416:15544-15563	Msa1408760:intron	25.0%
!!!	GTATCGATTAACAAAATTGT+TGG	-	tig0023416:15577-15596	Msa1408760:intron	25.0%
!	AACGAGCTATTATTATCAAA+AGG	-	tig0023416:15600-15619	Msa1408760:intron	25.0%
!	ACTAGTTAAGGAGTAAAAAA+TGG	+	tig0023416:15745-15764	None:intergenic	25.0%
!!	TACTCATTTTATACCACTTT+GGG	+	tig0023416:15834-15853	None:intergenic	25.0%
!!	ATACTCATTTTATACCACTT+TGG	+	tig0023416:15835-15854	None:intergenic	25.0%
!	TACGAAAATCTCTATTCAAA+GGG	+	tig0023416:15867-15886	None:intergenic	25.0%
!	ATACGAAAATCTCTATTCAA+AGG	+	tig0023416:15868-15887	None:intergenic	25.0%
!	CAACACATTACAAAACTTTA+TGG	+	tig0023416:15911-15930	None:intergenic	25.0%
!!!	CATAAAGTTTTGTAATGTGT+TGG	-	tig0023416:15909-15928	Msa1408760:intron	25.0%
!	GAATCTTGTCTTATGTTATT+TGG	+	tig0023416:16319-16338	None:intergenic	25.0%
!	GAGTGATTACACAAAAAAAT+AGG	+	tig0023416:16406-16425	None:intergenic	25.0%
!	ATACAGTGAAATATTTACCA+TGG	+	tig0023416:16431-16450	None:intergenic	25.0%
!	ATAAATAACACAAGCAGATA+CGG	+	tig0023416:16522-16541	None:intergenic	25.0%
!!!	TTTCTAGTTTTCCCTTTTTT+GGG	-	tig0023416:16661-16680	Msa1408760:intron	25.0%
!	TTTAGAAACTACAAGTACAT+GGG	+	tig0023416:16826-16845	None:intergenic	25.0%
!	ATTTAGAAACTACAAGTACA+TGG	+	tig0023416:16827-16846	None:intergenic	25.0%
!	TTCAAAACAACTAGCTAAAA+GGG	+	tig0023416:16985-17004	None:intergenic	25.0%
!	ATTCAAAACAACTAGCTAAA+AGG	+	tig0023416:16986-17005	None:intergenic	25.0%
!!!	TGATCTATTTTAACTGAAAC+TGG	-	tig0023416:17076-17095	Msa1408760:intron	25.0%
!!!	GATCTATTTTAACTGAAACT+GGG	-	tig0023416:17077-17096	Msa1408760:intron	25.0%
!	AATCTAAGTAAAACAGTACA+TGG	-	tig0023416:17338-17357	Msa1408760:intron	25.0%
!	TGAGTTTGATAAATGTACAT+TGG	-	tig0023416:17846-17865	Msa1408760:intron	25.0%
!!!	TTATCATGTCACGTTTTAAT+CGG	+	tig0023416:17948-17967	None:intergenic	25.0%
!	TTAGACGTATGTATAAAATC+TGG	-	tig0023416:17975-17994	Msa1408760:intron	25.0%
!	TACAACATACTAAATGAAGA+AGG	-	tig0023416:18255-18274	Msa1408760:intron	25.0%
!!!	AGAAATTTTGACATATCAAC+AGG	-	tig0023416:18430-18449	Msa1408760:intron	25.0%
!	GTATGTAATTGCCATTAATT+TGG	-	tig0023416:18801-18820	Msa1408760:five_prime_UTR	25.0%
!	AATACTCTCTTCCAAATTAA+TGG	+	tig0023416:18815-18834	None:intergenic	25.0%
	CATTCAGAGAAACAAAAAGA+TGG	-	tig0023416:14541-14560	Msa1408760:three_prime_UTR	30.0%
!	AAACAACCCATTTTGCAAAA+TGG	+	tig0023416:14815-14834	None:intergenic	30.0%
	GCCAATAATTGTATTGTTGA+AGG	-	tig0023416:14961-14980	Msa1408760:three_prime_UTR	30.0%
	CCCTTCAACAATACAATTAT+TGG	+	tig0023416:14965-14984	None:intergenic	30.0%
	AACATGATTGTTTCGATATG+GGG	-	tig0023416:14989-15008	Msa1408760:exon	30.0%
	GATACTGGATTTACTGTAAA+TGG	-	tig0023416:15155-15174	Msa1408760:intron	30.0%
	GTAAATGGAGTTGAATATGA+AGG	-	tig0023416:15170-15189	Msa1408760:intron	30.0%
	TTGGAAATTTGATCATGTCT+TGG	-	tig0023416:15207-15226	Msa1408760:intron	30.0%
!!!	ATACTTCTGCCACTTTTAAA+TGG	-	tig0023416:15361-15380	Msa1408760:intron	30.0%
	TTCCACTTTAAACTTCTTAG+CGG	+	tig0023416:15642-15661	None:intergenic	30.0%
!	ATTGTTTTCAAAACCCAAAG+TGG	-	tig0023416:15818-15837	Msa1408760:intron	30.0%
!	AAGAGGTAAACTGTCTATTT+TGG	+	tig0023416:15937-15956	None:intergenic	30.0%
	TACCTCTTAATCTCTCTTAA+TGG	-	tig0023416:15949-15968	Msa1408760:intron	30.0%
	TACCATTAAGAGAGATTAAG+AGG	+	tig0023416:15954-15973	None:intergenic	30.0%
	CTTAATCTCTCTTAATGGTA+TGG	-	tig0023416:15954-15973	Msa1408760:intron	30.0%
!!	AAAAGTACCTTTAGAAGTAC+TGG	+	tig0023416:16287-16306	None:intergenic	30.0%
!	TTTGGAATGCAATCATTAGA+CGG	+	tig0023416:16376-16395	None:intergenic	30.0%
	ACAAGAATTGAATGTGTCAT+TGG	-	tig0023416:16478-16497	Msa1408760:intron	30.0%
!!!	CTTTCTAGTTTTCCCTTTTT+TGG	-	tig0023416:16660-16679	Msa1408760:intron	30.0%
!!!	TTCTAGTTTTCCCTTTTTTG+GGG	-	tig0023416:16662-16681	Msa1408760:intron	30.0%
	TTTCCTATTTGAATGCTCTT+TGG	-	tig0023416:16708-16727	Msa1408760:CDS	30.0%
	TTCCTATTTGAATGCTCTTT+GGG	-	tig0023416:16709-16728	Msa1408760:CDS	30.0%
	TTACTTTCTCATTTGAGAAG+TGG	-	tig0023416:16777-16796	Msa1408760:intron	30.0%
	ATAACCATATTCGTGACATT+GGG	+	tig0023416:16881-16900	None:intergenic	30.0%
	AATAACCATATTCGTGACAT+TGG	+	tig0023416:16882-16901	None:intergenic	30.0%
	ACCATTTAACCTCTTTGATA+TGG	-	tig0023416:17395-17414	Msa1408760:intron	30.0%
	CCATTTAACCTCTTTGATAT+GGG	-	tig0023416:17396-17415	Msa1408760:intron	30.0%
!	GATATGGGACTTTAAGAAAA+TGG	-	tig0023416:17411-17430	Msa1408760:intron	30.0%
	GCTGGTATTAAAGGAAATAT+AGG	+	tig0023416:17447-17466	None:intergenic	30.0%
	AGGTTCAAAATAGATGATCA+TGG	-	tig0023416:17518-17537	Msa1408760:intron	30.0%
	GCATAGTTGTACTAATAGTT+AGG	-	tig0023416:17548-17567	Msa1408760:intron	30.0%
	TCAAACTCTTTACAATGTCA+TGG	-	tig0023416:17679-17698	Msa1408760:intron	30.0%
	ATGTCATGGCAACATATAAT+TGG	-	tig0023416:17693-17712	Msa1408760:intron	30.0%
	AAATCATAGGATCTATGTGT+TGG	-	tig0023416:17729-17748	Msa1408760:intron	30.0%
!	AGTTGTGTTATTATAGTCCT+GGG	-	tig0023416:17755-17774	Msa1408760:intron	30.0%
	AACATTATCATGTGACAAGA+CGG	+	tig0023416:17912-17931	None:intergenic	30.0%
!!	TATCATGTCACGTTTTAATC+GGG	+	tig0023416:17947-17966	None:intergenic	30.0%
	TCAAAGAGAAACAATCAAAC+TGG	+	tig0023416:18157-18176	None:intergenic	30.0%
!	TTTCTCTACTCAATAATGGA+TGG	+	tig0023416:18222-18241	None:intergenic	30.0%
	TGCATTTCTCTACTCAATAA+TGG	+	tig0023416:18226-18245	None:intergenic	30.0%
	TGTGAGCATATTTGAACAAA+GGG	+	tig0023416:18354-18373	None:intergenic	30.0%
	ATGTGAGCATATTTGAACAA+AGG	+	tig0023416:18355-18374	None:intergenic	30.0%
	TTTGAAAACATCAACAGACA+TGG	+	tig0023416:18484-18503	None:intergenic	30.0%
	TAAATGTTTAACATCCCCAA+GGG	+	tig0023416:18705-18724	None:intergenic	30.0%
	ATAAATGTTTAACATCCCCA+AGG	+	tig0023416:18706-18725	None:intergenic	30.0%
!!	TTGTTGTGTTGTTTCTGGAT+GGG	+	tig0023416:14492-14511	None:intergenic	35.0%
!!	ACTTCTTGTTGTGTTGTTTC+TGG	+	tig0023416:14497-14516	None:intergenic	35.0%
	GAATTGGGATGATTGTTATG+TGG	+	tig0023416:14653-14672	None:intergenic	35.0%
	TAGTTGTTGCTGGGATTTAA+TGG	-	tig0023416:15102-15121	Msa1408760:intron	35.0%
!	GTGATCTCTGAAAACTTGTT+TGG	+	tig0023416:15236-15255	None:intergenic	35.0%
	TTGCTCATTCTCAAAACCAA+TGG	+	tig0023416:15447-15466	None:intergenic	35.0%
!!!	TGGTTTTGAGAATGAGCAAA+TGG	-	tig0023416:15448-15467	Msa1408760:intron	35.0%
	GAATTAGCATCATCATTAGC+TGG	-	tig0023416:15521-15540	Msa1408760:intron	35.0%
!	TTCTTAAGAGTTTGTTTGGG+AGG	-	tig0023416:15986-16005	Msa1408760:intron	35.0%
!	TCTTAAGAGTTTGTTTGGGA+GGG	-	tig0023416:15987-16006	Msa1408760:intron	35.0%
!!!	GGATTTTGGAAGGTTTTAGA+GGG	-	tig0023416:16009-16028	Msa1408760:intron	35.0%
!!!	GATTTTGGAAGGTTTTAGAG+GGG	-	tig0023416:16010-16029	Msa1408760:intron	35.0%
!	AGAGGAGTATACCAAATTGA+GGG	+	tig0023416:16259-16278	None:intergenic	35.0%
!	AAGAGGAGTATACCAAATTG+AGG	+	tig0023416:16260-16279	None:intergenic	35.0%
	TTGGAATGCAATCATTAGAC+GGG	+	tig0023416:16375-16394	None:intergenic	35.0%
	TTTGTGTAATCACTCATCCA+TGG	-	tig0023416:16411-16430	Msa1408760:intron	35.0%
	GAAAAATCCAACCTGGAATA+GGG	+	tig0023416:16613-16632	None:intergenic	35.0%
	TGAAAAATCCAACCTGGAAT+AGG	+	tig0023416:16614-16633	None:intergenic	35.0%
	AAGGGAAAACTAGAAAGTCA+AGG	+	tig0023416:16657-16676	None:intergenic	35.0%
	TAGAATTGCACCCCAAAAAA+GGG	+	tig0023416:16675-16694	None:intergenic	35.0%
	ATAGAATTGCACCCCAAAAA+AGG	+	tig0023416:16676-16695	None:intergenic	35.0%
	TCCTATTTGAATGCTCTTTG+GGG	-	tig0023416:16710-16729	Msa1408760:CDS	35.0%
	GATAATTATACACGGGAAAG+TGG	+	tig0023416:16927-16946	None:intergenic	35.0%
	AACATAATGAGCATAACGCA+GGG	+	tig0023416:17019-17038	None:intergenic	35.0%
	AAACATAATGAGCATAACGC+AGG	+	tig0023416:17020-17039	None:intergenic	35.0%
	TTGCCAGAGATTCTGATTAT+TGG	-	tig0023416:17109-17128	Msa1408760:intron	35.0%
	ATGTTGATCCTGAACTTAGA+CGG	-	tig0023416:17152-17171	Msa1408760:intron	35.0%
	CTGAACTTAGACGGTTTATT+CGG	-	tig0023416:17161-17180	Msa1408760:intron	35.0%
	CCCATATCAAAGAGGTTAAA+TGG	+	tig0023416:17399-17418	None:intergenic	35.0%
	CTTAAAGTCCCATATCAAAG+AGG	+	tig0023416:17407-17426	None:intergenic	35.0%
!	ATGGGACTTTAAGAAAATGG+AGG	-	tig0023416:17414-17433	Msa1408760:intron	35.0%
	GTTGAAAAGGTGATTTCGAA+TGG	-	tig0023416:17484-17503	Msa1408760:intron	35.0%
	TTCGAATGGTGAGAAAATGA+AGG	-	tig0023416:17498-17517	Msa1408760:intron	35.0%
	CATGGCAACATATAATTGGA+TGG	-	tig0023416:17697-17716	Msa1408760:intron	35.0%
!	GAGTTGTGTTATTATAGTCC+TGG	-	tig0023416:17754-17773	Msa1408760:intron	35.0%
!!	GGTTTCTAGCTTGTAACATT+CGG	+	tig0023416:18114-18133	None:intergenic	35.0%
	GCAGTGATCATAATTATGGT+TGG	+	tig0023416:18135-18154	None:intergenic	35.0%
	ACTGGCAGTGATCATAATTA+TGG	+	tig0023416:18139-18158	None:intergenic	35.0%
	CTTCATGAAGTAACTCCATA+TGG	+	tig0023416:18306-18325	None:intergenic	35.0%
	TGAAATCTTGCGTAAATCTG+CGG	-	tig0023416:18385-18404	Msa1408760:intron	35.0%
	CTCATAAATCCAAGCAAAGT+TGG	-	tig0023416:18547-18566	Msa1408760:intron	35.0%
!!!	AAGCAAAGTTGGCTTTTCTA+GGG	-	tig0023416:18558-18577	Msa1408760:CDS	35.0%
	GTCACAACTCTAACAAAATG+AGG	+	tig0023416:18618-18637	None:intergenic	35.0%
!!	CTTGTTGTGTTGTTTCTGGA+TGG	+	tig0023416:14493-14512	None:intergenic	40.0%
	ACAACACAACAAGAAGTTCG+TGG	-	tig0023416:14500-14519	Msa1408760:three_prime_UTR	40.0%
	CAACACAACAAGAAGTTCGT+GGG	-	tig0023416:14501-14520	Msa1408760:three_prime_UTR	40.0%
	AACAAGAAGTTCGTGGGTTT+GGG	-	tig0023416:14507-14526	Msa1408760:three_prime_UTR	40.0%
	GGATGATTGTTATGTGGAGA+AGG	+	tig0023416:14647-14666	None:intergenic	40.0%
!!	TTGAAAACGGAGTTGGTCTT+CGG	+	tig0023416:14738-14757	None:intergenic	40.0%
!	AAGACCAACTCCGTTTTCAA+GGG	-	tig0023416:14738-14757	Msa1408760:three_prime_UTR	40.0%
	AGAGTAGGTACCCTTGAAAA+CGG	+	tig0023416:14751-14770	None:intergenic	40.0%
	TGGAATGAAAGGAAGAGAGT+AGG	+	tig0023416:14766-14785	None:intergenic	40.0%
	ATTGTTTCGATATGGGGTCA+AGG	-	tig0023416:14995-15014	Msa1408760:CDS	40.0%
	TTATCGGCAATAGTTGTTGC+TGG	-	tig0023416:15092-15111	Msa1408760:intron	40.0%
	TATCGGCAATAGTTGTTGCT+GGG	-	tig0023416:15093-15112	Msa1408760:intron	40.0%
!	GAAGGAAGTTTGCTTTGTGT+TGG	-	tig0023416:15188-15207	Msa1408760:intron	40.0%
	TTTCAGAGATCACTGCTGAT+AGG	-	tig0023416:15243-15262	Msa1408760:intron	40.0%
!	TAATCAAGCCTTTTCGCAGT+AGG	-	tig0023416:15483-15502	Msa1408760:intron	40.0%
	TAACTACACCTACTGCGAAA+AGG	+	tig0023416:15494-15513	None:intergenic	40.0%
	TGCCGCTAAGAAGTTTAAAG+TGG	-	tig0023416:15637-15656	Msa1408760:intron	40.0%
!	CTTAAGAGTTTGTTTGGGAG+GGG	-	tig0023416:15988-16007	Msa1408760:intron	40.0%
!!	GGGATTTTGGAAGGTTTTAG+AGG	-	tig0023416:16008-16027	Msa1408760:intron	40.0%
	TTAGAGGTGAGGAAGACTAA+TGG	+	tig0023416:16225-16244	None:intergenic	40.0%
	TCTTCCTCACCTCTAACTAT+TGG	-	tig0023416:16229-16248	Msa1408760:intron	40.0%
	TAGTCCAATAGTTAGAGGTG+AGG	+	tig0023416:16236-16255	None:intergenic	40.0%
	CTATTGGACTACCCTCAATT+TGG	-	tig0023416:16245-16264	Msa1408760:intron	40.0%
!!	TTAGAAGTACTGGTGGTAAG+AGG	+	tig0023416:16277-16296	None:intergenic	40.0%
	CTTACCACCAGTACTTCTAA+AGG	-	tig0023416:16277-16296	Msa1408760:intron	40.0%
!!	AGTACCTTTAGAAGTACTGG+TGG	+	tig0023416:16284-16303	None:intergenic	40.0%
	GCAATCATTAGACGGGAAAT+TGG	+	tig0023416:16368-16387	None:intergenic	40.0%
	CAAAGCTGAAAAATCCAACC+TGG	+	tig0023416:16620-16639	None:intergenic	40.0%
	ATAAGTTAGGACCCTAAAGC+TGG	-	tig0023416:16848-16867	Msa1408760:intron	40.0%
	GAATCCCAATGTCACGAATA+TGG	-	tig0023416:16874-16893	Msa1408760:intron	40.0%
	CAGCCAATAATCAGAATCTC+TGG	+	tig0023416:17115-17134	None:intergenic	40.0%
!	GAGATTCTGATTATTGGCTG+TGG	-	tig0023416:17115-17134	Msa1408760:intron	40.0%
!	TTCTGATTATTGGCTGTGGA+AGG	-	tig0023416:17119-17138	Msa1408760:intron	40.0%
	CGAATAAACCGTCTAAGTTC+AGG	+	tig0023416:17163-17182	None:intergenic	40.0%
!	GAAGTTAGAAGCTGTTGACT+CGG	-	tig0023416:17195-17214	Msa1408760:intron	40.0%
	AAAACAGTACATGGTACCTC+AGG	-	tig0023416:17347-17366	Msa1408760:intron	40.0%
!!	GTCTGAAATTCGGGTTGAAA+AGG	-	tig0023416:17471-17490	Msa1408760:intron	40.0%
	AAATGAAGAAGGTCGCATTG+TGG	-	tig0023416:18266-18285	Msa1408760:intron	40.0%
	AACTCCATATGGAAGAAGTG+CGG	+	tig0023416:18295-18314	None:intergenic	40.0%
	TGGAGTTACTTCATGAAGCT+TGG	-	tig0023416:18308-18327	Msa1408760:intron	40.0%
	GAGCATATTTGAACAAAGGG+TGG	+	tig0023416:18351-18370	None:intergenic	40.0%
	CTAGAAAAGCCAACTTTGCT+TGG	+	tig0023416:18559-18578	None:intergenic	40.0%
!!!	CAAGCAAAGTTGGCTTTTCT+AGG	-	tig0023416:18557-18576	Msa1408760:CDS	40.0%
!!!	AGCAAAGTTGGCTTTTCTAG+GGG	-	tig0023416:18559-18578	Msa1408760:CDS	40.0%
	CAACAAGAAGTTCGTGGGTT+TGG	-	tig0023416:14506-14525	Msa1408760:three_prime_UTR	45.0%
	ACAAGAAGTTCGTGGGTTTG+GGG	-	tig0023416:14508-14527	Msa1408760:three_prime_UTR	45.0%
!!	GAAGGTTTGTTGAGCTTGAG+AGG	+	tig0023416:14629-14648	None:intergenic	45.0%
!	CGTATAAAGAGAAAGCGCGA+CGG	+	tig0023416:14688-14707	None:intergenic	45.0%
!!	TGAAAACGGAGTTGGTCTTC+GGG	+	tig0023416:14737-14756	None:intergenic	45.0%
!	GAAGACCAACTCCGTTTTCA+AGG	-	tig0023416:14737-14756	Msa1408760:three_prime_UTR	45.0%
	ACTCCTTAACTAGTGCCCTT+AGG	-	tig0023416:15751-15770	Msa1408760:intron	45.0%
	CTCCTTAACTAGTGCCCTTA+GGG	-	tig0023416:15752-15771	Msa1408760:intron	45.0%
!	GTTTGTTTGGGAGGGGATTT+TGG	-	tig0023416:15995-16014	Msa1408760:intron	45.0%
!!!	TTTGGAAGGTTTTAGAGGGG+AGG	-	tig0023416:16013-16032	Msa1408760:intron	45.0%
!!!	TTGGAAGGTTTTAGAGGGGA+GGG	-	tig0023416:16014-16033	Msa1408760:intron	45.0%
	TGAGGAAGACTAATGGAAGG+GGG	+	tig0023416:16218-16237	None:intergenic	45.0%
	GTGAGGAAGACTAATGGAAG+GGG	+	tig0023416:16219-16238	None:intergenic	45.0%
	GGTGAGGAAGACTAATGGAA+GGG	+	tig0023416:16220-16239	None:intergenic	45.0%
	AGGTGAGGAAGACTAATGGA+AGG	+	tig0023416:16221-16240	None:intergenic	45.0%
	GAGGGTAGTCCAATAGTTAG+AGG	+	tig0023416:16241-16260	None:intergenic	45.0%
	CTACTATCTTCTCTACCGTG+AGG	-	tig0023416:16338-16357	Msa1408760:intron	45.0%
	AAATCCAACCTGGAATAGGG+CGG	+	tig0023416:16610-16629	None:intergenic	45.0%
!!	GCCCCAAAGAGCATTCAAAT+AGG	+	tig0023416:16714-16733	None:intergenic	45.0%
	TGGGATTCTCACCAGCTTTA+GGG	+	tig0023416:16862-16881	None:intergenic	45.0%
	TTGGGATTCTCACCAGCTTT+AGG	+	tig0023416:16863-16882	None:intergenic	45.0%
	CAGTAATCCAAGAGAGAGAG+AGG	+	tig0023416:16961-16980	None:intergenic	45.0%
	AGACGGTTTATTCGGTCTAC+TGG	-	tig0023416:17169-17188	Msa1408760:intron	45.0%
	TACATGGTACCTCAGGACAT+TGG	-	tig0023416:17354-17373	Msa1408760:intron	45.0%
!	CAGACACTGGCTGGTATTAA+AGG	+	tig0023416:17456-17475	None:intergenic	45.0%
!	ACCAGCCAGTGTCTGAAATT+CGG	-	tig0023416:17461-17480	Msa1408760:intron	45.0%
	TCAACCCGAATTTCAGACAC+TGG	+	tig0023416:17469-17488	None:intergenic	45.0%
	TAGTCCTGGGTATCACTCTA+AGG	-	tig0023416:17768-17787	Msa1408760:intron	45.0%
!!	CTGGGTATCACTCTAAGGTT+GGG	-	tig0023416:17773-17792	Msa1408760:intron	45.0%
!	AGGGTGGCTACTAAGAGTAT+AGG	+	tig0023416:18335-18354	None:intergenic	45.0%
!!!	GCAAAGTTGGCTTTTCTAGG+GGG	-	tig0023416:18560-18579	Msa1408760:CDS	45.0%
	TGTTTAACATCCCCAAGGGA+GGG	+	tig0023416:18701-18720	None:intergenic	45.0%
	ATGTTTAACATCCCCAAGGG+AGG	+	tig0023416:18702-18721	None:intergenic	45.0%
!!!	ATTTTTTTATTTAATGTAAT+GGG	-	tig0023416:15044-15063	Msa1408760:CDS	5.0%
!!	GTGTTGTTTCTGGATGGGTC+AGG	+	tig0023416:14487-14506	None:intergenic	50.0%
	CGGAGATTGCGTATGAGGTT+TGG	+	tig0023416:14596-14615	None:intergenic	50.0%
	GCTTGAGAGGTTGTTCGTTG+CGG	+	tig0023416:14616-14635	None:intergenic	50.0%
!!	GAAAACGGAGTTGGTCTTCG+GGG	+	tig0023416:14736-14755	None:intergenic	50.0%
	GGTACCCTTGAAAACGGAGT+TGG	+	tig0023416:14745-14764	None:intergenic	50.0%
	GATATGGGGTCAAGGAAGAG+AGG	-	tig0023416:15003-15022	Msa1408760:CDS	50.0%
!!	TGCCCTAAGGGCACTAGTTA+AGG	+	tig0023416:15757-15776	None:intergenic	50.0%
!	GTTTGGGAGGGGATTTTGGA+AGG	-	tig0023416:15999-16018	Msa1408760:intron	50.0%
!!!	GGTTTTAGAGGGGAGGGTTT+TGG	-	tig0023416:16020-16039	Msa1408760:intron	50.0%
!!	TTTAGAGGGGAGGGTTTTGG+AGG	-	tig0023416:16023-16042	Msa1408760:intron	50.0%
!!!	TTAGAGGGGAGGGTTTTGGA+GGG	-	tig0023416:16024-16043	Msa1408760:intron	50.0%
	AATGGAAGGGGGGTTTCAGA+CGG	+	tig0023416:16207-16226	None:intergenic	50.0%
	GAGGAAGACTAATGGAAGGG+GGG	+	tig0023416:16217-16236	None:intergenic	50.0%
	CGGGAAATTGGATAGCCTCA+CGG	+	tig0023416:16356-16375	None:intergenic	50.0%
	CAAATTGTCCGCCCTATTCC+AGG	-	tig0023416:16599-16618	Msa1408760:intron	50.0%
	CTACTGTCCTCTCTCTCTCT+TGG	-	tig0023416:16951-16970	Msa1408760:intron	50.0%
	ACCTCAGGACATTGGTACAG+AGG	-	tig0023416:17362-17381	Msa1408760:intron	50.0%
	CCTCAGGACATTGGTACAGA+GGG	-	tig0023416:17363-17382	Msa1408760:intron	50.0%
	CTCAGGACATTGGTACAGAG+GGG	-	tig0023416:17364-17383	Msa1408760:intron	50.0%
	TCAGGACATTGGTACAGAGG+GGG	-	tig0023416:17365-17384	Msa1408760:intron	50.0%
	ACATTGGTACAGAGGGGGAA+TGG	-	tig0023416:17370-17389	Msa1408760:intron	50.0%
	CATTGGTACAGAGGGGGAAT+GGG	-	tig0023416:17371-17390	Msa1408760:intron	50.0%
!	CCAGCCAGTGTCTGAAATTC+GGG	-	tig0023416:17462-17481	Msa1408760:intron	50.0%
	CCAACCTTAGAGTGATACCC+AGG	+	tig0023416:17775-17794	None:intergenic	50.0%
!!	CCTGGGTATCACTCTAAGGT+TGG	-	tig0023416:17772-17791	Msa1408760:intron	50.0%
!!	TTGGCTTTTCTAGGGGGTAG+TGG	-	tig0023416:18566-18585	Msa1408760:CDS	50.0%
!	TCTAGGGGGTAGTGGTTGTT+TGG	-	tig0023416:18574-18593	Msa1408760:CDS	50.0%
	TTTAACATCCCCAAGGGAGG+GGG	+	tig0023416:18699-18718	None:intergenic	50.0%
	GTTTAACATCCCCAAGGGAG+GGG	+	tig0023416:18700-18719	None:intergenic	50.0%
	CGTTGCGGAGATTGCGTATG+AGG	+	tig0023416:14601-14620	None:intergenic	55.0%
	CGGAGAGAGGGCAAGGAATT+GGG	+	tig0023416:14668-14687	None:intergenic	55.0%
	ACGGAGAGAGGGCAAGGAAT+TGG	+	tig0023416:14669-14688	None:intergenic	55.0%
	ACTAGTGCCCTTAGGGCACA+AGG	-	tig0023416:15759-15778	Msa1408760:intron	55.0%
	CTAGTGCCCTTAGGGCACAA+GGG	-	tig0023416:15760-15779	Msa1408760:intron	55.0%
	CAAGTGCCCTTGTGCCCTAA+GGG	+	tig0023416:15769-15788	None:intergenic	55.0%
	ACAAGTGCCCTTGTGCCCTA+AGG	+	tig0023416:15770-15789	None:intergenic	55.0%
	ATGGAAGGGGGGTTTCAGAC+GGG	+	tig0023416:16206-16225	None:intergenic	55.0%
	TTGTCCGCCCTATTCCAGGT+TGG	-	tig0023416:16603-16622	Msa1408760:intron	55.0%
	CCCTCTGTACCAATGTCCTG+AGG	+	tig0023416:17366-17385	None:intergenic	55.0%
	CCCGAATTTCAGACACTGGC+TGG	+	tig0023416:17465-17484	None:intergenic	55.0%
	GCTGCCGCACTTCTTCCATA+TGG	-	tig0023416:18288-18307	Msa1408760:intron	55.0%
	TTAACATCCCCAAGGGAGGG+GGG	+	tig0023416:18698-18717	None:intergenic	55.0%
!	GAGAAAGCGCGACGGAGAGA+GGG	+	tig0023416:14680-14699	None:intergenic	60.0%
!	AGAGAAAGCGCGACGGAGAG+AGG	+	tig0023416:14681-14700	None:intergenic	60.0%
	AAGGGGGGTTTCAGACGGGA+GGG	+	tig0023416:16202-16221	None:intergenic	60.0%
	GAAGGGGGGTTTCAGACGGG+AGG	+	tig0023416:16203-16222	None:intergenic	65.0%
	AGCGCGACGGAGAGAGGGCA+AGG	+	tig0023416:14675-14694	None:intergenic	70.0%
	AGAACCCTGCCCCCCTCCCT+TGG	-	tig0023416:18686-18705	Msa1408760:CDS	70.0%
	GAACCCTGCCCCCCTCCCTT+GGG	-	tig0023416:18687-18706	Msa1408760:CDS	70.0%
	AACCCTGCCCCCCTCCCTTG+GGG	-	tig0023416:18688-18707	Msa1408760:CDS	70.0%
	ATCCCCAAGGGAGGGGGGCA+GGG	+	tig0023416:18693-18712	None:intergenic	70.0%
	CATCCCCAAGGGAGGGGGGC+AGG	+	tig0023416:18694-18713	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
tig0023416	gene	14462	18853	14462	ID=Msa1408760;Name=Msa1408760
tig0023416	mRNA	14462	18853	14462	ID=Msa1408760-mRNA-1;Parent=Msa1408760;Name=Msa1408760-mRNA-1;_AED=0.03;_eAED=0.03;_QI=98\|1\|1\|1\|0.75\|1\|5\|530\|179
tig0023416	exon	14462	15078	14462	ID=Msa1408760-mRNA-1:exon:25708;Parent=Msa1408760-mRNA-1
tig0023416	exon	16099	16199	16099	ID=Msa1408760-mRNA-1:exon:25707;Parent=Msa1408760-mRNA-1
tig0023416	exon	16695	16729	16695	ID=Msa1408760-mRNA-1:exon:25706;Parent=Msa1408760-mRNA-1
tig0023416	exon	18051	18167	18051	ID=Msa1408760-mRNA-1:exon:25705;Parent=Msa1408760-mRNA-1
tig0023416	exon	18556	18853	18556	ID=Msa1408760-mRNA-1:exon:25704;Parent=Msa1408760-mRNA-1
tig0023416	five_prime_UTR	18756	18853	18756	ID=Msa1408760-mRNA-1:five_prime_utr;Parent=Msa1408760-mRNA-1
tig0023416	CDS	18556	18755	18556	ID=Msa1408760-mRNA-1:cds;Parent=Msa1408760-mRNA-1
tig0023416	CDS	18051	18167	18051	ID=Msa1408760-mRNA-1:cds;Parent=Msa1408760-mRNA-1
tig0023416	CDS	16695	16729	16695	ID=Msa1408760-mRNA-1:cds;Parent=Msa1408760-mRNA-1
tig0023416	CDS	16099	16199	16099	ID=Msa1408760-mRNA-1:cds;Parent=Msa1408760-mRNA-1
tig0023416	CDS	14992	15078	14992	ID=Msa1408760-mRNA-1:cds;Parent=Msa1408760-mRNA-1
tig0023416	three_prime_UTR	14462	14991	14462	ID=Msa1408760-mRNA-1:three_prime_utr;Parent=Msa1408760-mRNA-1

Gene Sequence

>Msa1408760

ATGGCTGTTCGTCAAAGAGCAGTAACAGCACTTCCAAACCTCATACGCAATCTCCGCAACGAACAACCTCTCAAGCTCAACAAACCTTCTCCACATAACAATCATCCCAATTCCTTGCCCTCTCTCCGTCGCGCTTTCTCTTTATACGATCAGATCAATCTCATTGACAATGTCCCCGAAGACCAACTCCGTTTTCAAGGGTTTAAAGATACTGGATTTACTGTAAATGGAGTTGAATATGAAGGAAGTTTGCTTTGTGTTGGAAATTTGATCATGTCTTGGAAACCAAACAAGTTTTCAGAGATCACTGCTGATAGCTTGTCACTCTTTCAAATTGTCCGCCCTATTCCAGAGATTCTGATTATTGGCTGTGGAAGGAGCATTCAACATGTTGATCCTGAACTTAGACGGTTTATTCGGTCTACTGGCATGAAGTTAGAAGCTGTTGACTCGAGAAATGCAGCATCAACTTACAACATACTAAATGAAGAAGGTCGCATTGTGGCTGCCGCACTTCTTCCATATGGAGTTACTTCATGA

Protein sequence

>Msa1408760

MAVRQRAVTALPNLIRNLRNEQPLKLNKPSPHNNHPNSLPSLRRAFSLYDQINLIDNVPEDQLRFQGFKDTGFTVNGVEYEGSLLCVGNLIMSWKPNKFSEITADSLSLFQIVRPIPEILIIGCGRSIQHVDPELRRFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLPYGVTS*