Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062042.t1 | XP_013463688.1 | 98.8 | 164 | 2 | 0 | 1 | 164 | 1 | 164 | 6.50E-86 | 326.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062042.t1 | B7FGQ9 | 98.8 | 164 | 2 | 0 | 1 | 164 | 1 | 164 | 4.7e-86 | 326.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene062042 | 0.854424 | 1.24E-61 | -1.69E-46 |
| MS.gene049159 | MS.gene062042 | 0.854836 | 9.44E-62 | -1.69E-46 |
| MS.gene04918 | MS.gene062042 | 0.815698 | 8.09E-52 | -1.69E-46 |
| MS.gene049254 | MS.gene062042 | 0.857705 | 1.36E-62 | -1.69E-46 |
| MS.gene049350 | MS.gene062042 | 0.808081 | 3.69E-50 | -1.69E-46 |
| MS.gene049404 | MS.gene062042 | 0.855574 | 5.76E-62 | -1.69E-46 |
| MS.gene049435 | MS.gene062042 | 0.808142 | 3.58E-50 | -1.69E-46 |
| MS.gene049452 | MS.gene062042 | 0.836004 | 1.21E-56 | -1.69E-46 |
| MS.gene049499 | MS.gene062042 | 0.817246 | 3.64E-52 | -1.69E-46 |
| MS.gene049501 | MS.gene062042 | 0.841792 | 3.83E-58 | -1.69E-46 |
| MS.gene049647 | MS.gene062042 | 0.816158 | 6.39E-52 | -1.69E-46 |
| MS.gene049711 | MS.gene062042 | 0.83575 | 1.40E-56 | -1.69E-46 |
| MS.gene049807 | MS.gene062042 | 0.806942 | 6.44E-50 | -1.69E-46 |
| MS.gene049808 | MS.gene062042 | 0.800723 | 1.26E-48 | -1.69E-46 |
| MS.gene049821 | MS.gene062042 | 0.835409 | 1.71E-56 | -1.69E-46 |
| MS.gene049850 | MS.gene062042 | 0.816279 | 6.00E-52 | -1.69E-46 |
| MS.gene049983 | MS.gene062042 | 0.846514 | 2.07E-59 | -1.69E-46 |
| MS.gene050026 | MS.gene062042 | 0.827861 | 1.24E-54 | -1.69E-46 |
| MS.gene050237 | MS.gene062042 | 0.820603 | 6.29E-53 | -1.69E-46 |
| MS.gene050273 | MS.gene062042 | 0.848411 | 6.24E-60 | -1.69E-46 |
| MS.gene050442 | MS.gene062042 | 0.809632 | 1.72E-50 | -1.69E-46 |
| MS.gene050559 | MS.gene062042 | 0.828226 | 1.01E-54 | -1.69E-46 |
| MS.gene050561 | MS.gene062042 | 0.827307 | 1.68E-54 | -1.69E-46 |
| MS.gene050562 | MS.gene062042 | 0.816303 | 5.93E-52 | -1.69E-46 |
| MS.gene050657 | MS.gene062042 | 0.805093 | 1.58E-49 | -1.69E-46 |
| MS.gene050689 | MS.gene062042 | 0.800264 | 1.56E-48 | -1.69E-46 |
| MS.gene050750 | MS.gene062042 | 0.800673 | 1.29E-48 | -1.69E-46 |
| MS.gene050759 | MS.gene062042 | 0.828724 | 7.67E-55 | -1.69E-46 |
| MS.gene050807 | MS.gene062042 | 0.851999 | 6.15E-61 | -1.69E-46 |
| MS.gene050808 | MS.gene062042 | 0.814132 | 1.80E-51 | -1.69E-46 |
| MS.gene050815 | MS.gene062042 | 0.80304 | 4.21E-49 | -1.69E-46 |
| MS.gene050826 | MS.gene062042 | 0.825157 | 5.46E-54 | -1.69E-46 |
| MS.gene050953 | MS.gene062042 | 0.800319 | 1.52E-48 | -1.69E-46 |
| MS.gene050962 | MS.gene062042 | 0.817168 | 3.79E-52 | -1.69E-46 |
| MS.gene051102 | MS.gene062042 | 0.805483 | 1.31E-49 | -1.69E-46 |
| MS.gene051181 | MS.gene062042 | 0.806208 | 9.20E-50 | -1.69E-46 |
| MS.gene051198 | MS.gene062042 | 0.876428 | 1.41E-68 | -1.69E-46 |
| MS.gene051247 | MS.gene062042 | 0.868781 | 5.06E-66 | -1.69E-46 |
| MS.gene051279 | MS.gene062042 | 0.861039 | 1.36E-63 | -1.69E-46 |
| MS.gene051328 | MS.gene062042 | 0.8293 | 5.56E-55 | -1.69E-46 |
| MS.gene051332 | MS.gene062042 | 0.816651 | 4.95E-52 | -1.69E-46 |
| MS.gene051388 | MS.gene062042 | 0.822298 | 2.55E-53 | -1.69E-46 |
| MS.gene051577 | MS.gene062042 | 0.805258 | 1.46E-49 | -1.69E-46 |
| MS.gene05157 | MS.gene062042 | 0.800381 | 1.48E-48 | -1.69E-46 |
| MS.gene051594 | MS.gene062042 | 0.806445 | 8.20E-50 | -1.69E-46 |
| MS.gene051700 | MS.gene062042 | 0.836347 | 9.87E-57 | -1.69E-46 |
| MS.gene051719 | MS.gene062042 | 0.847748 | 9.50E-60 | -1.69E-46 |
| MS.gene051720 | MS.gene062042 | 0.857964 | 1.14E-62 | -1.69E-46 |
| MS.gene051744 | MS.gene062042 | 0.834855 | 2.35E-56 | -1.69E-46 |
| MS.gene051800 | MS.gene062042 | 0.836428 | 9.41E-57 | -1.69E-46 |
| MS.gene051957 | MS.gene062042 | 0.810784 | 9.70E-51 | -1.69E-46 |
| MS.gene052037 | MS.gene062042 | 0.820112 | 8.15E-53 | -1.69E-46 |
| MS.gene052133 | MS.gene062042 | 0.806385 | 8.44E-50 | -1.69E-46 |
| MS.gene052239 | MS.gene062042 | -0.822931 | 1.82E-53 | -1.69E-46 |
| MS.gene052459 | MS.gene062042 | 0.828477 | 8.80E-55 | -1.69E-46 |
| MS.gene052463 | MS.gene062042 | 0.847409 | 1.18E-59 | -1.69E-46 |
| MS.gene052516 | MS.gene062042 | 0.87252 | 2.99E-67 | -1.69E-46 |
| MS.gene052519 | MS.gene062042 | 0.857415 | 1.66E-62 | -1.69E-46 |
| MS.gene052561 | MS.gene062042 | 0.829422 | 5.19E-55 | -1.69E-46 |
| MS.gene052582 | MS.gene062042 | 0.846697 | 1.85E-59 | -1.69E-46 |
| MS.gene052584 | MS.gene062042 | 0.834986 | 2.18E-56 | -1.69E-46 |
| MS.gene052611 | MS.gene062042 | 0.805801 | 1.12E-49 | -1.69E-46 |
| MS.gene052628 | MS.gene062042 | 0.802733 | 4.88E-49 | -1.69E-46 |
| MS.gene052665 | MS.gene062042 | 0.81805 | 2.40E-52 | -1.69E-46 |
| MS.gene052773 | MS.gene062042 | 0.830461 | 2.90E-55 | -1.69E-46 |
| MS.gene052863 | MS.gene062042 | 0.840312 | 9.38E-58 | -1.69E-46 |
| MS.gene053006 | MS.gene062042 | 0.80368 | 3.11E-49 | -1.69E-46 |
| MS.gene053008 | MS.gene062042 | 0.829579 | 4.76E-55 | -1.69E-46 |
| MS.gene053079 | MS.gene062042 | 0.842972 | 1.87E-58 | -1.69E-46 |
| MS.gene053122 | MS.gene062042 | 0.808362 | 3.22E-50 | -1.69E-46 |
| MS.gene053144 | MS.gene062042 | 0.833739 | 4.49E-56 | -1.69E-46 |
| MS.gene053154 | MS.gene062042 | 0.803439 | 3.48E-49 | -1.69E-46 |
| MS.gene05315 | MS.gene062042 | 0.807784 | 4.27E-50 | -1.69E-46 |
| MS.gene053164 | MS.gene062042 | 0.800997 | 1.11E-48 | -1.69E-46 |
| MS.gene053166 | MS.gene062042 | 0.809646 | 1.71E-50 | -1.69E-46 |
| MS.gene053226 | MS.gene062042 | 0.85409 | 1.55E-61 | -1.69E-46 |
| MS.gene053581 | MS.gene062042 | 0.823116 | 1.65E-53 | -1.69E-46 |
| MS.gene053599 | MS.gene062042 | 0.809605 | 1.74E-50 | -1.69E-46 |
| MS.gene053621 | MS.gene062042 | 0.816882 | 4.40E-52 | -1.69E-46 |
| MS.gene05364 | MS.gene062042 | 0.83677 | 7.70E-57 | -1.69E-46 |
| MS.gene053678 | MS.gene062042 | 0.839236 | 1.79E-57 | -1.69E-46 |
| MS.gene053931 | MS.gene062042 | 0.819761 | 9.80E-53 | -1.69E-46 |
| MS.gene05414 | MS.gene062042 | 0.816898 | 4.36E-52 | -1.69E-46 |
| MS.gene05415 | MS.gene062042 | 0.829415 | 5.21E-55 | -1.69E-46 |
| MS.gene054236 | MS.gene062042 | 0.852166 | 5.52E-61 | -1.69E-46 |
| MS.gene05423 | MS.gene062042 | 0.825651 | 4.17E-54 | -1.69E-46 |
| MS.gene054472 | MS.gene062042 | 0.822168 | 2.74E-53 | -1.69E-46 |
| MS.gene054576 | MS.gene062042 | 0.807858 | 4.12E-50 | -1.69E-46 |
| MS.gene054584 | MS.gene062042 | 0.834929 | 2.26E-56 | -1.69E-46 |
| MS.gene05458 | MS.gene062042 | 0.840886 | 6.64E-58 | -1.69E-46 |
| MS.gene05462 | MS.gene062042 | 0.80139 | 9.21E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene062042 | 0.868842 | 4.83E-66 | -1.69E-46 |
| MS.gene054775 | MS.gene062042 | 0.855683 | 5.35E-62 | -1.69E-46 |
| MS.gene054801 | MS.gene062042 | 0.807861 | 4.11E-50 | -1.69E-46 |
| MS.gene054991 | MS.gene062042 | 0.83412 | 3.60E-56 | -1.69E-46 |
| MS.gene055144 | MS.gene062042 | 0.823124 | 1.64E-53 | -1.69E-46 |
| MS.gene05517 | MS.gene062042 | 0.812153 | 4.89E-51 | -1.69E-46 |
| MS.gene055227 | MS.gene062042 | 0.817292 | 3.56E-52 | -1.69E-46 |
| MS.gene055228 | MS.gene062042 | 0.840346 | 9.19E-58 | -1.69E-46 |
| MS.gene055464 | MS.gene062042 | 0.824457 | 7.99E-54 | -1.69E-46 |
| MS.gene055465 | MS.gene062042 | 0.855795 | 4.96E-62 | -1.69E-46 |
| MS.gene055466 | MS.gene062042 | 0.863273 | 2.80E-64 | -1.69E-46 |
| MS.gene055468 | MS.gene062042 | 0.862407 | 5.18E-64 | -1.69E-46 |
| MS.gene055469 | MS.gene062042 | 0.827278 | 1.71E-54 | -1.69E-46 |
| MS.gene055512 | MS.gene062042 | 0.811811 | 5.81E-51 | -1.69E-46 |
| MS.gene055513 | MS.gene062042 | 0.821684 | 3.54E-53 | -1.69E-46 |
| MS.gene055580 | MS.gene062042 | -0.828498 | 8.69E-55 | -1.69E-46 |
| MS.gene055589 | MS.gene062042 | 0.80038 | 1.48E-48 | -1.69E-46 |
| MS.gene055608 | MS.gene062042 | 0.834523 | 2.85E-56 | -1.69E-46 |
| MS.gene055623 | MS.gene062042 | 0.810928 | 9.03E-51 | -1.69E-46 |
| MS.gene055724 | MS.gene062042 | 0.809944 | 1.47E-50 | -1.69E-46 |
| MS.gene055778 | MS.gene062042 | 0.81579 | 7.72E-52 | -1.69E-46 |
| MS.gene055818 | MS.gene062042 | 0.836511 | 8.97E-57 | -1.69E-46 |
| MS.gene055841 | MS.gene062042 | 0.825708 | 4.05E-54 | -1.69E-46 |
| MS.gene055926 | MS.gene062042 | 0.850059 | 2.17E-60 | -1.69E-46 |
| MS.gene056043 | MS.gene062042 | -0.816825 | 4.53E-52 | -1.69E-46 |
| MS.gene05604 | MS.gene062042 | 0.816258 | 6.07E-52 | -1.69E-46 |
| MS.gene056050 | MS.gene062042 | 0.816048 | 6.76E-52 | -1.69E-46 |
| MS.gene056162 | MS.gene062042 | 0.811411 | 7.10E-51 | -1.69E-46 |
| MS.gene056174 | MS.gene062042 | 0.845228 | 4.63E-59 | -1.69E-46 |
| MS.gene056215 | MS.gene062042 | 0.836583 | 8.59E-57 | -1.69E-46 |
| MS.gene056252 | MS.gene062042 | 0.835043 | 2.11E-56 | -1.69E-46 |
| MS.gene056308 | MS.gene062042 | 0.842465 | 2.54E-58 | -1.69E-46 |
| MS.gene056366 | MS.gene062042 | 0.830762 | 2.45E-55 | -1.69E-46 |
| MS.gene056507 | MS.gene062042 | 0.800889 | 1.17E-48 | -1.69E-46 |
| MS.gene056553 | MS.gene062042 | 0.813174 | 2.93E-51 | -1.69E-46 |
| MS.gene056595 | MS.gene062042 | 0.858484 | 7.98E-63 | -1.69E-46 |
| MS.gene056699 | MS.gene062042 | 0.805853 | 1.09E-49 | -1.69E-46 |
| MS.gene056776 | MS.gene062042 | 0.809784 | 1.59E-50 | -1.69E-46 |
| MS.gene05686 | MS.gene062042 | 0.843977 | 1.01E-58 | -1.69E-46 |
| MS.gene05690 | MS.gene062042 | 0.84849 | 5.93E-60 | -1.69E-46 |
| MS.gene057034 | MS.gene062042 | 0.808097 | 3.66E-50 | -1.69E-46 |
| MS.gene057060 | MS.gene062042 | 0.821958 | 3.06E-53 | -1.69E-46 |
| MS.gene057102 | MS.gene062042 | 0.800419 | 1.45E-48 | -1.69E-46 |
| MS.gene057208 | MS.gene062042 | 0.84369 | 1.20E-58 | -1.69E-46 |
| MS.gene057287 | MS.gene062042 | 0.811073 | 8.40E-51 | -1.69E-46 |
| MS.gene057314 | MS.gene062042 | 0.818416 | 1.98E-52 | -1.69E-46 |
| MS.gene057414 | MS.gene062042 | 0.803136 | 4.03E-49 | -1.69E-46 |
| MS.gene057444 | MS.gene062042 | 0.850437 | 1.70E-60 | -1.69E-46 |
| MS.gene057446 | MS.gene062042 | 0.80577 | 1.14E-49 | -1.69E-46 |
| MS.gene057693 | MS.gene062042 | 0.821806 | 3.32E-53 | -1.69E-46 |
| MS.gene057694 | MS.gene062042 | 0.809129 | 2.20E-50 | -1.69E-46 |
| MS.gene057705 | MS.gene062042 | 0.806364 | 8.53E-50 | -1.69E-46 |
| MS.gene057869 | MS.gene062042 | 0.814432 | 1.55E-51 | -1.69E-46 |
| MS.gene057915 | MS.gene062042 | 0.813906 | 2.02E-51 | -1.69E-46 |
| MS.gene058008 | MS.gene062042 | 0.810511 | 1.11E-50 | -1.69E-46 |
| MS.gene058009 | MS.gene062042 | 0.840425 | 8.76E-58 | -1.69E-46 |
| MS.gene058010 | MS.gene062042 | 0.876165 | 1.73E-68 | -1.69E-46 |
| MS.gene058037 | MS.gene062042 | 0.819866 | 9.28E-53 | -1.69E-46 |
| MS.gene058054 | MS.gene062042 | 0.810655 | 1.03E-50 | -1.69E-46 |
| MS.gene058294 | MS.gene062042 | 0.801814 | 7.54E-49 | -1.69E-46 |
| MS.gene058330 | MS.gene062042 | 0.811714 | 6.10E-51 | -1.69E-46 |
| MS.gene058339 | MS.gene062042 | 0.84167 | 4.13E-58 | -1.69E-46 |
| MS.gene058360 | MS.gene062042 | 0.824102 | 9.68E-54 | -1.69E-46 |
| MS.gene05847 | MS.gene062042 | 0.835886 | 1.29E-56 | -1.69E-46 |
| MS.gene058548 | MS.gene062042 | 0.812598 | 3.91E-51 | -1.69E-46 |
| MS.gene058625 | MS.gene062042 | 0.849991 | 2.27E-60 | -1.69E-46 |
| MS.gene058781 | MS.gene062042 | 0.822257 | 2.61E-53 | -1.69E-46 |
| MS.gene058783 | MS.gene062042 | 0.852628 | 4.07E-61 | -1.69E-46 |
| MS.gene058852 | MS.gene062042 | 0.802138 | 6.47E-49 | -1.69E-46 |
| MS.gene058979 | MS.gene062042 | 0.833369 | 5.55E-56 | -1.69E-46 |
| MS.gene05897 | MS.gene062042 | 0.807055 | 6.09E-50 | -1.69E-46 |
| MS.gene059015 | MS.gene062042 | 0.815355 | 9.64E-52 | -1.69E-46 |
| MS.gene059170 | MS.gene062042 | 0.820486 | 6.69E-53 | -1.69E-46 |
| MS.gene059272 | MS.gene062042 | 0.830274 | 3.22E-55 | -1.69E-46 |
| MS.gene059283 | MS.gene062042 | 0.803379 | 3.59E-49 | -1.69E-46 |
| MS.gene059439 | MS.gene062042 | 0.809635 | 1.72E-50 | -1.69E-46 |
| MS.gene05954 | MS.gene062042 | 0.816655 | 4.95E-52 | -1.69E-46 |
| MS.gene059570 | MS.gene062042 | 0.821831 | 3.28E-53 | -1.69E-46 |
| MS.gene059584 | MS.gene062042 | 0.826045 | 3.36E-54 | -1.69E-46 |
| MS.gene059625 | MS.gene062042 | 0.853627 | 2.11E-61 | -1.69E-46 |
| MS.gene059842 | MS.gene062042 | 0.860751 | 1.66E-63 | -1.69E-46 |
| MS.gene059937 | MS.gene062042 | 0.813065 | 3.09E-51 | -1.69E-46 |
| MS.gene060011 | MS.gene062042 | 0.821736 | 3.45E-53 | -1.69E-46 |
| MS.gene060167 | MS.gene062042 | 0.833284 | 5.83E-56 | -1.69E-46 |
| MS.gene060310 | MS.gene062042 | 0.857039 | 2.14E-62 | -1.69E-46 |
| MS.gene060322 | MS.gene062042 | 0.841795 | 3.83E-58 | -1.69E-46 |
| MS.gene060365 | MS.gene062042 | 0.813726 | 2.21E-51 | -1.69E-46 |
| MS.gene060429 | MS.gene062042 | 0.854012 | 1.63E-61 | -1.69E-46 |
| MS.gene060521 | MS.gene062042 | 0.820037 | 8.48E-53 | -1.69E-46 |
| MS.gene06052 | MS.gene062042 | 0.836788 | 7.62E-57 | -1.69E-46 |
| MS.gene060587 | MS.gene062042 | 0.831328 | 1.78E-55 | -1.69E-46 |
| MS.gene060603 | MS.gene062042 | 0.813055 | 3.11E-51 | -1.69E-46 |
| MS.gene060637 | MS.gene062042 | 0.802919 | 4.46E-49 | -1.69E-46 |
| MS.gene060803 | MS.gene062042 | 0.807925 | 3.98E-50 | -1.69E-46 |
| MS.gene060932 | MS.gene062042 | 0.809549 | 1.79E-50 | -1.69E-46 |
| MS.gene060935 | MS.gene062042 | 0.814115 | 1.82E-51 | -1.69E-46 |
| MS.gene061100 | MS.gene062042 | 0.831708 | 1.43E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062042.t1 | MTR_2g046150 | 98.780 | 164 | 2 | 0 | 1 | 164 | 1 | 164 | 5.01e-118 | 330 |
| MS.gene062042.t1 | MTR_7g111900 | 46.479 | 142 | 75 | 1 | 6 | 146 | 2 | 143 | 5.66e-38 | 128 |
| MS.gene062042.t1 | MTR_1g084200 | 43.137 | 153 | 86 | 1 | 6 | 157 | 2 | 154 | 1.49e-36 | 124 |
| MS.gene062042.t1 | MTR_7g103200 | 43.382 | 136 | 76 | 1 | 6 | 140 | 2 | 137 | 2.05e-36 | 123 |
| MS.gene062042.t1 | MTR_2g019480 | 38.129 | 139 | 86 | 0 | 15 | 153 | 16 | 154 | 4.71e-32 | 112 |
| MS.gene062042.t1 | MTR_2g091215 | 40.909 | 132 | 78 | 0 | 11 | 142 | 3 | 134 | 9.45e-28 | 100 |
| MS.gene062042.t1 | MTR_2g091210 | 38.462 | 130 | 80 | 0 | 11 | 140 | 3 | 132 | 7.39e-27 | 98.6 |
| MS.gene062042.t1 | MTR_4g122930 | 36.986 | 146 | 85 | 4 | 7 | 147 | 3 | 146 | 5.99e-24 | 91.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062042.t1 | AT4G24130 | 68.667 | 150 | 46 | 1 | 1 | 149 | 1 | 150 | 5.38e-72 | 214 |
| MS.gene062042.t1 | AT1G09310 | 46.207 | 145 | 76 | 2 | 7 | 150 | 3 | 146 | 1.29e-34 | 119 |
| MS.gene062042.t1 | AT1G56580 | 44.595 | 148 | 79 | 3 | 7 | 151 | 3 | 150 | 3.13e-34 | 118 |
| MS.gene062042.t1 | AT5G46230 | 37.121 | 132 | 83 | 0 | 9 | 140 | 8 | 139 | 1.61e-31 | 110 |
| MS.gene062042.t1 | AT1G30020 | 33.846 | 130 | 82 | 1 | 7 | 136 | 6 | 131 | 1.02e-25 | 96.3 |
| MS.gene062042.t1 | AT5G49600 | 34.694 | 147 | 85 | 4 | 7 | 143 | 1 | 146 | 1.38e-20 | 83.6 |
Find 29 sgRNAs with CRISPR-Local
Find 35 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAGGTGTTCTTCCCTTAA+AGG | 0.146605 | 2.3:+44606877 | MS.gene062042:CDS |
| ACATTCAACAAGATCCTTTA+AGG | 0.179628 | 2.3:-44606891 | None:intergenic |
| AGAGTAAGCAATTGTTTGTT+TGG | 0.287883 | 2.3:+44607062 | MS.gene062042:CDS |
| TGTGGAAGAGTTAGAGAAAC+TGG | 0.316514 | 2.3:+44606911 | MS.gene062042:CDS |
| TCAATACTCATTTCAACTAT+AGG | 0.386964 | 2.3:-44607088 | None:intergenic |
| CTTTAAGGGAAGAACACCTT+TGG | 0.399056 | 2.3:-44606876 | None:intergenic |
| GAGTAAGCAATTGTTTGTTT+GGG | 0.413681 | 2.3:+44607063 | MS.gene062042:CDS |
| GAAGTTGCAATTGAAGGATA+AGG | 0.421440 | 2.3:+44607213 | MS.gene062042:CDS |
| CATTCAACAAGATCCTTTAA+GGG | 0.423103 | 2.3:-44606890 | None:intergenic |
| TTTAAGGGAAGAACACCTTT+GGG | 0.434347 | 2.3:-44606875 | None:intergenic |
| ATACAACTCTTAGAAGAGCT+TGG | 0.448905 | 2.3:+44606848 | MS.gene062042:CDS |
| TTTAAGACTCCTATGGGGAT+TGG | 0.453850 | 2.3:+44607136 | MS.gene062042:CDS |
| GTATGAGAAGTTGCAATTGA+AGG | 0.453990 | 2.3:+44607207 | MS.gene062042:CDS |
| AATTGAAGTTACTGCTTATG+TGG | 0.459578 | 2.3:+44607006 | MS.gene062042:CDS |
| ATAGTTGAAATGAGTATTGA+GGG | 0.460794 | 2.3:+44607091 | MS.gene062042:CDS |
| AAGCTCTTCTAAGAGTTGTA+TGG | 0.469293 | 2.3:-44606846 | None:intergenic |
| CCTTCAAAATAATGTTCACT+TGG | 0.482969 | 2.3:-44606959 | None:intergenic |
| TATAGTTGAAATGAGTATTG+AGG | 0.501110 | 2.3:+44607090 | MS.gene062042:CDS |
| TTAAAGGATCTTGTTGAATG+TGG | 0.521582 | 2.3:+44606893 | MS.gene062042:CDS |
| CTTCTAAGAGTTGTATGGAA+TGG | 0.521965 | 2.3:-44606841 | None:intergenic |
| GTTGCAATTGAAGGATAAGG+AGG | 0.546376 | 2.3:+44607216 | MS.gene062042:CDS |
| GCAGGTGCAGAAATAGTGTA+TGG | 0.551940 | 2.3:+44606800 | MS.gene062042:CDS |
| TACTTCATTTATGAGTGTTG+AGG | 0.556318 | 2.3:+44607174 | MS.gene062042:CDS |
| TTCAAGATGAAGAAAATGAG+TGG | 0.567086 | 2.3:+44607034 | MS.gene062042:CDS |
| ACAAAGACTCTTGTGAGCTA+CGG | 0.601286 | 2.3:+44606983 | MS.gene062042:CDS |
| GAAGAGCTTGGATTTCCCAA+AGG | 0.601476 | 2.3:+44606860 | MS.gene062042:CDS |
| ATGGTAACAAATGAACGTGC+AGG | 0.612544 | 2.3:+44606782 | MS.gene062042:CDS |
| AAAGACTTACCAATCCCCAT+AGG | 0.653062 | 2.3:-44607145 | None:intergenic |
| AATGGCTAGCAACAGCACAA+TGG | 0.699467 | 2.3:+44606763 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TCAATACTCATTTCAACTAT+AGG | - | chr2.3:44607091-44607110 | None:intergenic | 25.0% |
| !! | TATAGTTGAAATGAGTATTG+AGG | + | chr2.3:44607090-44607109 | MS.gene062042:CDS | 25.0% |
| !!! | ATAGTTGAAATGAGTATTGA+GGG | + | chr2.3:44607091-44607110 | MS.gene062042:CDS | 25.0% |
| !!! | ATGTATTTTAAGACTCCTAT+GGG | + | chr2.3:44607130-44607149 | MS.gene062042:CDS | 25.0% |
| !!! | TTTTGTTTGGATGAAACAAA+AGG | + | chr2.3:44606934-44606953 | MS.gene062042:CDS | 25.0% |
| AATTGAAGTTACTGCTTATG+TGG | + | chr2.3:44607006-44607025 | MS.gene062042:CDS | 30.0% | |
| ACATTCAACAAGATCCTTTA+AGG | - | chr2.3:44606894-44606913 | None:intergenic | 30.0% | |
| AGAGTAAGCAATTGTTTGTT+TGG | + | chr2.3:44607062-44607081 | MS.gene062042:CDS | 30.0% | |
| CATTCAACAAGATCCTTTAA+GGG | - | chr2.3:44606893-44606912 | None:intergenic | 30.0% | |
| CCTTCAAAATAATGTTCACT+TGG | - | chr2.3:44606962-44606981 | None:intergenic | 30.0% | |
| GAGTAAGCAATTGTTTGTTT+GGG | + | chr2.3:44607063-44607082 | MS.gene062042:CDS | 30.0% | |
| TTAAAGGATCTTGTTGAATG+TGG | + | chr2.3:44606893-44606912 | MS.gene062042:CDS | 30.0% | |
| TTCAAGATGAAGAAAATGAG+TGG | + | chr2.3:44607034-44607053 | MS.gene062042:CDS | 30.0% | |
| ! | TACTTCATTTATGAGTGTTG+AGG | + | chr2.3:44607174-44607193 | MS.gene062042:CDS | 30.0% |
| !!! | ATGAGTATTGAGGGTTTTAA+TGG | + | chr2.3:44607100-44607119 | MS.gene062042:CDS | 30.0% |
| !!! | CCAAGTGAACATTATTTTGA+AGG | + | chr2.3:44606959-44606978 | MS.gene062042:CDS | 30.0% |
| !!! | GATGTATTTTAAGACTCCTA+TGG | + | chr2.3:44607129-44607148 | MS.gene062042:CDS | 30.0% |
| !!! | TGTATTTTAAGACTCCTATG+GGG | + | chr2.3:44607131-44607150 | MS.gene062042:CDS | 30.0% |
| !!! | TTAGAGAAACTGGTTTTGTT+TGG | + | chr2.3:44606921-44606940 | MS.gene062042:CDS | 30.0% |
| ATACAACTCTTAGAAGAGCT+TGG | + | chr2.3:44606848-44606867 | MS.gene062042:CDS | 35.0% | |
| GAAGTTGCAATTGAAGGATA+AGG | + | chr2.3:44607213-44607232 | MS.gene062042:CDS | 35.0% | |
| GTATGAGAAGTTGCAATTGA+AGG | + | chr2.3:44607207-44607226 | MS.gene062042:CDS | 35.0% | |
| TTTAAGGGAAGAACACCTTT+GGG | - | chr2.3:44606878-44606897 | None:intergenic | 35.0% | |
| ! | AAGCTCTTCTAAGAGTTGTA+TGG | - | chr2.3:44606849-44606868 | None:intergenic | 35.0% |
| ! | CTTCTAAGAGTTGTATGGAA+TGG | - | chr2.3:44606844-44606863 | None:intergenic | 35.0% |
| AAAGACTTACCAATCCCCAT+AGG | - | chr2.3:44607148-44607167 | None:intergenic | 40.0% | |
| ACAAAGACTCTTGTGAGCTA+CGG | + | chr2.3:44606983-44607002 | MS.gene062042:CDS | 40.0% | |
| ATGGTAACAAATGAACGTGC+AGG | + | chr2.3:44606782-44606801 | MS.gene062042:CDS | 40.0% | |
| GTTGCAATTGAAGGATAAGG+AGG | + | chr2.3:44607216-44607235 | MS.gene062042:CDS | 40.0% | |
| TGTGGAAGAGTTAGAGAAAC+TGG | + | chr2.3:44606911-44606930 | MS.gene062042:CDS | 40.0% | |
| ! | CTTTAAGGGAAGAACACCTT+TGG | - | chr2.3:44606879-44606898 | None:intergenic | 40.0% |
| ! | TTTAAGACTCCTATGGGGAT+TGG | + | chr2.3:44607136-44607155 | MS.gene062042:CDS | 40.0% |
| !! | CAAAGGTGTTCTTCCCTTAA+AGG | + | chr2.3:44606877-44606896 | MS.gene062042:CDS | 40.0% |
| GAAGAGCTTGGATTTCCCAA+AGG | + | chr2.3:44606860-44606879 | MS.gene062042:CDS | 45.0% | |
| GCAGGTGCAGAAATAGTGTA+TGG | + | chr2.3:44606800-44606819 | MS.gene062042:CDS | 45.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 44606764 | 44607258 | 44606764 | ID=MS.gene062042 |
| chr2.3 | mRNA | 44606764 | 44607258 | 44606764 | ID=MS.gene062042.t1;Parent=MS.gene062042 |
| chr2.3 | exon | 44606764 | 44607258 | 44606764 | ID=MS.gene062042.t1.exon1;Parent=MS.gene062042.t1 |
| chr2.3 | CDS | 44606764 | 44607258 | 44606764 | ID=cds.MS.gene062042.t1;Parent=MS.gene062042.t1 |
| Gene Sequence |
| Protein sequence |
