Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40068.t1 | RHN53259.1 | 98.8 | 333 | 4 | 0 | 1 | 333 | 136 | 468 | 5.40E-172 | 613.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40068.t1 | A2XX57 | 84.7 | 333 | 51 | 0 | 1 | 333 | 136 | 468 | 1.3e-150 | 533.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40068.t1 | G7K0Z9 | 98.8 | 333 | 4 | 0 | 1 | 333 | 136 | 468 | 3.9e-172 | 613.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene40068 | 0.882419 | 1.06E-70 | -1.69E-46 |
| MS.gene049159 | MS.gene40068 | 0.858215 | 9.60E-63 | -1.69E-46 |
| MS.gene049254 | MS.gene40068 | 0.869015 | 4.25E-66 | -1.69E-46 |
| MS.gene049272 | MS.gene40068 | 0.814341 | 1.62E-51 | -1.69E-46 |
| MS.gene049343 | MS.gene40068 | 0.82105 | 4.96E-53 | -1.69E-46 |
| MS.gene049350 | MS.gene40068 | 0.81579 | 7.72E-52 | -1.69E-46 |
| MS.gene049368 | MS.gene40068 | 0.840595 | 7.91E-58 | -1.69E-46 |
| MS.gene049404 | MS.gene40068 | 0.824235 | 9.01E-54 | -1.69E-46 |
| MS.gene049435 | MS.gene40068 | 0.810867 | 9.31E-51 | -1.69E-46 |
| MS.gene049499 | MS.gene40068 | 0.828022 | 1.13E-54 | -1.69E-46 |
| MS.gene049501 | MS.gene40068 | 0.809541 | 1.80E-50 | -1.69E-46 |
| MS.gene049585 | MS.gene40068 | 0.813522 | 2.45E-51 | -1.69E-46 |
| MS.gene049647 | MS.gene40068 | 0.81355 | 2.42E-51 | -1.69E-46 |
| MS.gene049652 | MS.gene40068 | 0.806374 | 8.49E-50 | -1.69E-46 |
| MS.gene049711 | MS.gene40068 | 0.825309 | 5.03E-54 | -1.69E-46 |
| MS.gene049744 | MS.gene40068 | 0.819693 | 1.02E-52 | -1.69E-46 |
| MS.gene049807 | MS.gene40068 | 0.802769 | 4.79E-49 | -1.69E-46 |
| MS.gene049850 | MS.gene40068 | 0.819984 | 8.72E-53 | -1.69E-46 |
| MS.gene049983 | MS.gene40068 | 0.850834 | 1.31E-60 | -1.69E-46 |
| MS.gene050026 | MS.gene40068 | 0.81251 | 4.09E-51 | -1.69E-46 |
| MS.gene050156 | MS.gene40068 | 0.803227 | 3.86E-49 | -1.69E-46 |
| MS.gene050442 | MS.gene40068 | 0.812377 | 4.37E-51 | -1.69E-46 |
| MS.gene050559 | MS.gene40068 | 0.840341 | 9.22E-58 | -1.69E-46 |
| MS.gene050561 | MS.gene40068 | 0.845799 | 3.24E-59 | -1.69E-46 |
| MS.gene050562 | MS.gene40068 | 0.838755 | 2.38E-57 | -1.69E-46 |
| MS.gene050654 | MS.gene40068 | 0.807094 | 5.98E-50 | -1.69E-46 |
| MS.gene050759 | MS.gene40068 | 0.807106 | 5.94E-50 | -1.69E-46 |
| MS.gene050844 | MS.gene40068 | 0.825178 | 5.40E-54 | -1.69E-46 |
| MS.gene051147 | MS.gene40068 | 0.805708 | 1.17E-49 | -1.69E-46 |
| MS.gene051181 | MS.gene40068 | 0.815081 | 1.11E-51 | -1.69E-46 |
| MS.gene051198 | MS.gene40068 | 0.855624 | 5.57E-62 | -1.69E-46 |
| MS.gene051210 | MS.gene40068 | 0.818872 | 1.56E-52 | -1.69E-46 |
| MS.gene051247 | MS.gene40068 | 0.840762 | 7.15E-58 | -1.69E-46 |
| MS.gene051279 | MS.gene40068 | 0.839067 | 1.98E-57 | -1.69E-46 |
| MS.gene051332 | MS.gene40068 | 0.855033 | 8.27E-62 | -1.69E-46 |
| MS.gene051490 | MS.gene40068 | 0.831983 | 1.23E-55 | -1.69E-46 |
| MS.gene051543 | MS.gene40068 | 0.835811 | 1.35E-56 | -1.69E-46 |
| MS.gene051744 | MS.gene40068 | 0.875495 | 2.94E-68 | -1.69E-46 |
| MS.gene051800 | MS.gene40068 | 0.860064 | 2.68E-63 | -1.69E-46 |
| MS.gene05191 | MS.gene40068 | 0.806911 | 6.54E-50 | -1.69E-46 |
| MS.gene051957 | MS.gene40068 | 0.811173 | 7.99E-51 | -1.69E-46 |
| MS.gene052012 | MS.gene40068 | 0.809093 | 2.24E-50 | -1.69E-46 |
| MS.gene052020 | MS.gene40068 | 0.801162 | 1.03E-48 | -1.69E-46 |
| MS.gene052037 | MS.gene40068 | 0.821965 | 3.05E-53 | -1.69E-46 |
| MS.gene052239 | MS.gene40068 | -0.808792 | 2.60E-50 | -1.69E-46 |
| MS.gene052307 | MS.gene40068 | 0.822734 | 2.02E-53 | -1.69E-46 |
| MS.gene052311 | MS.gene40068 | 0.801241 | 9.88E-49 | -1.69E-46 |
| MS.gene052333 | MS.gene40068 | 0.812403 | 4.31E-51 | -1.69E-46 |
| MS.gene052463 | MS.gene40068 | 0.833563 | 4.96E-56 | -1.69E-46 |
| MS.gene052516 | MS.gene40068 | 0.835532 | 1.59E-56 | -1.69E-46 |
| MS.gene052519 | MS.gene40068 | 0.828821 | 7.26E-55 | -1.69E-46 |
| MS.gene052534 | MS.gene40068 | 0.805545 | 1.27E-49 | -1.69E-46 |
| MS.gene052582 | MS.gene40068 | 0.842884 | 1.97E-58 | -1.69E-46 |
| MS.gene052584 | MS.gene40068 | 0.831672 | 1.46E-55 | -1.69E-46 |
| MS.gene052586 | MS.gene40068 | 0.813497 | 2.48E-51 | -1.69E-46 |
| MS.gene052609 | MS.gene40068 | 0.854068 | 1.57E-61 | -1.69E-46 |
| MS.gene052611 | MS.gene40068 | 0.811494 | 6.81E-51 | -1.69E-46 |
| MS.gene052773 | MS.gene40068 | 0.849438 | 3.23E-60 | -1.69E-46 |
| MS.gene052775 | MS.gene40068 | 0.811832 | 5.75E-51 | -1.69E-46 |
| MS.gene052863 | MS.gene40068 | 0.836622 | 8.40E-57 | -1.69E-46 |
| MS.gene052896 | MS.gene40068 | 0.80782 | 4.19E-50 | -1.69E-46 |
| MS.gene052954 | MS.gene40068 | 0.800121 | 1.67E-48 | -1.69E-46 |
| MS.gene053008 | MS.gene40068 | 0.801356 | 9.36E-49 | -1.69E-46 |
| MS.gene053079 | MS.gene40068 | 0.842378 | 2.68E-58 | -1.69E-46 |
| MS.gene05308 | MS.gene40068 | 0.819482 | 1.14E-52 | -1.69E-46 |
| MS.gene053166 | MS.gene40068 | 0.831871 | 1.31E-55 | -1.69E-46 |
| MS.gene053226 | MS.gene40068 | 0.855797 | 4.96E-62 | -1.69E-46 |
| MS.gene05350 | MS.gene40068 | 0.830299 | 3.18E-55 | -1.69E-46 |
| MS.gene053621 | MS.gene40068 | 0.809993 | 1.44E-50 | -1.69E-46 |
| MS.gene05364 | MS.gene40068 | 0.803039 | 4.22E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene40068 | 0.80527 | 1.45E-49 | -1.69E-46 |
| MS.gene053998 | MS.gene40068 | 0.803656 | 3.14E-49 | -1.69E-46 |
| MS.gene05414 | MS.gene40068 | 0.812478 | 4.16E-51 | -1.69E-46 |
| MS.gene05415 | MS.gene40068 | 0.83545 | 1.67E-56 | -1.69E-46 |
| MS.gene054236 | MS.gene40068 | 0.844393 | 7.77E-59 | -1.69E-46 |
| MS.gene05423 | MS.gene40068 | 0.803716 | 3.05E-49 | -1.69E-46 |
| MS.gene054467 | MS.gene40068 | 0.836402 | 9.56E-57 | -1.69E-46 |
| MS.gene054468 | MS.gene40068 | 0.81058 | 1.07E-50 | -1.69E-46 |
| MS.gene054472 | MS.gene40068 | 0.826146 | 3.18E-54 | -1.69E-46 |
| MS.gene054479 | MS.gene40068 | 0.849889 | 2.42E-60 | -1.69E-46 |
| MS.gene054576 | MS.gene40068 | 0.854078 | 1.56E-61 | -1.69E-46 |
| MS.gene05458 | MS.gene40068 | 0.829752 | 4.32E-55 | -1.69E-46 |
| MS.gene054641 | MS.gene40068 | 0.804927 | 1.71E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene40068 | 0.875795 | 2.33E-68 | -1.69E-46 |
| MS.gene05468 | MS.gene40068 | 0.804087 | 2.56E-49 | -1.69E-46 |
| MS.gene054709 | MS.gene40068 | 0.802398 | 5.72E-49 | -1.69E-46 |
| MS.gene054775 | MS.gene40068 | 0.828856 | 7.12E-55 | -1.69E-46 |
| MS.gene054943 | MS.gene40068 | 0.831903 | 1.28E-55 | -1.69E-46 |
| MS.gene054991 | MS.gene40068 | 0.825826 | 3.79E-54 | -1.69E-46 |
| MS.gene055227 | MS.gene40068 | 0.830029 | 3.70E-55 | -1.69E-46 |
| MS.gene055228 | MS.gene40068 | 0.838628 | 2.57E-57 | -1.69E-46 |
| MS.gene055313 | MS.gene40068 | 0.800523 | 1.38E-48 | -1.69E-46 |
| MS.gene055464 | MS.gene40068 | 0.827361 | 1.63E-54 | -1.69E-46 |
| MS.gene055466 | MS.gene40068 | 0.812078 | 5.08E-51 | -1.69E-46 |
| MS.gene055513 | MS.gene40068 | 0.825445 | 4.67E-54 | -1.69E-46 |
| MS.gene055586 | MS.gene40068 | 0.840185 | 1.01E-57 | -1.69E-46 |
| MS.gene055589 | MS.gene40068 | 0.804669 | 1.93E-49 | -1.69E-46 |
| MS.gene055623 | MS.gene40068 | 0.826079 | 3.30E-54 | -1.69E-46 |
| MS.gene055701 | MS.gene40068 | 0.800048 | 1.73E-48 | -1.69E-46 |
| MS.gene055724 | MS.gene40068 | 0.812824 | 3.49E-51 | -1.69E-46 |
| MS.gene055778 | MS.gene40068 | 0.809623 | 1.73E-50 | -1.69E-46 |
| MS.gene055818 | MS.gene40068 | 0.858108 | 1.03E-62 | -1.69E-46 |
| MS.gene055864 | MS.gene40068 | 0.824552 | 7.59E-54 | -1.69E-46 |
| MS.gene055926 | MS.gene40068 | 0.835273 | 1.85E-56 | -1.69E-46 |
| MS.gene05604 | MS.gene40068 | 0.829389 | 5.29E-55 | -1.69E-46 |
| MS.gene056050 | MS.gene40068 | 0.870189 | 1.76E-66 | -1.69E-46 |
| MS.gene056162 | MS.gene40068 | 0.830548 | 2.76E-55 | -1.69E-46 |
| MS.gene056173 | MS.gene40068 | 0.819911 | 9.06E-53 | -1.69E-46 |
| MS.gene056174 | MS.gene40068 | 0.850656 | 1.47E-60 | -1.69E-46 |
| MS.gene056252 | MS.gene40068 | 0.817543 | 3.12E-52 | -1.69E-46 |
| MS.gene056308 | MS.gene40068 | 0.83312 | 6.40E-56 | -1.69E-46 |
| MS.gene056366 | MS.gene40068 | 0.83654 | 8.81E-57 | -1.69E-46 |
| MS.gene056373 | MS.gene40068 | 0.816463 | 5.46E-52 | -1.69E-46 |
| MS.gene056480 | MS.gene40068 | 0.813131 | 2.99E-51 | -1.69E-46 |
| MS.gene056506 | MS.gene40068 | 0.811573 | 6.54E-51 | -1.69E-46 |
| MS.gene056507 | MS.gene40068 | 0.821402 | 4.11E-53 | -1.69E-46 |
| MS.gene056595 | MS.gene40068 | 0.834006 | 3.85E-56 | -1.69E-46 |
| MS.gene05659 | MS.gene40068 | 0.807232 | 5.59E-50 | -1.69E-46 |
| MS.gene056699 | MS.gene40068 | 0.852939 | 3.32E-61 | -1.69E-46 |
| MS.gene056776 | MS.gene40068 | 0.808275 | 3.36E-50 | -1.69E-46 |
| MS.gene056854 | MS.gene40068 | 0.809726 | 1.64E-50 | -1.69E-46 |
| MS.gene05686 | MS.gene40068 | 0.864374 | 1.27E-64 | -1.69E-46 |
| MS.gene05690 | MS.gene40068 | 0.832275 | 1.04E-55 | -1.69E-46 |
| MS.gene056973 | MS.gene40068 | 0.823455 | 1.37E-53 | -1.69E-46 |
| MS.gene057026 | MS.gene40068 | 0.8437 | 1.19E-58 | -1.69E-46 |
| MS.gene057034 | MS.gene40068 | 0.841641 | 4.20E-58 | -1.69E-46 |
| MS.gene057102 | MS.gene40068 | 0.810861 | 9.34E-51 | -1.69E-46 |
| MS.gene057132 | MS.gene40068 | 0.80723 | 5.59E-50 | -1.69E-46 |
| MS.gene057208 | MS.gene40068 | 0.854047 | 1.60E-61 | -1.69E-46 |
| MS.gene057324 | MS.gene40068 | 0.805902 | 1.07E-49 | -1.69E-46 |
| MS.gene057360 | MS.gene40068 | 0.812358 | 4.41E-51 | -1.69E-46 |
| MS.gene057444 | MS.gene40068 | 0.823639 | 1.24E-53 | -1.69E-46 |
| MS.gene057446 | MS.gene40068 | 0.80381 | 2.92E-49 | -1.69E-46 |
| MS.gene057598 | MS.gene40068 | 0.829889 | 4.00E-55 | -1.69E-46 |
| MS.gene057600 | MS.gene40068 | 0.801296 | 9.63E-49 | -1.69E-46 |
| MS.gene057611 | MS.gene40068 | 0.816191 | 6.28E-52 | -1.69E-46 |
| MS.gene057855 | MS.gene40068 | 0.862954 | 3.51E-64 | -1.69E-46 |
| MS.gene057869 | MS.gene40068 | 0.836376 | 9.70E-57 | -1.69E-46 |
| MS.gene057915 | MS.gene40068 | 0.843994 | 9.95E-59 | -1.69E-46 |
| MS.gene058008 | MS.gene40068 | 0.819609 | 1.06E-52 | -1.69E-46 |
| MS.gene058009 | MS.gene40068 | 0.841609 | 4.28E-58 | -1.69E-46 |
| MS.gene058010 | MS.gene40068 | 0.872392 | 3.30E-67 | -1.69E-46 |
| MS.gene058037 | MS.gene40068 | 0.818601 | 1.80E-52 | -1.69E-46 |
| MS.gene058081 | MS.gene40068 | 0.830299 | 3.18E-55 | -1.69E-46 |
| MS.gene058289 | MS.gene40068 | 0.825464 | 4.62E-54 | -1.69E-46 |
| MS.gene058292 | MS.gene40068 | 0.808459 | 3.07E-50 | -1.69E-46 |
| MS.gene058330 | MS.gene40068 | 0.801427 | 9.05E-49 | -1.69E-46 |
| MS.gene058339 | MS.gene40068 | 0.801211 | 1.00E-48 | -1.69E-46 |
| MS.gene058427 | MS.gene40068 | 0.827435 | 1.57E-54 | -1.69E-46 |
| MS.gene05847 | MS.gene40068 | 0.806334 | 8.65E-50 | -1.69E-46 |
| MS.gene058502 | MS.gene40068 | 0.801104 | 1.05E-48 | -1.69E-46 |
| MS.gene058625 | MS.gene40068 | 0.856827 | 2.47E-62 | -1.69E-46 |
| MS.gene058647 | MS.gene40068 | 0.8073 | 5.41E-50 | -1.69E-46 |
| MS.gene058781 | MS.gene40068 | 0.842588 | 2.36E-58 | -1.69E-46 |
| MS.gene058783 | MS.gene40068 | 0.85335 | 2.53E-61 | -1.69E-46 |
| MS.gene058829 | MS.gene40068 | 0.804004 | 2.66E-49 | -1.69E-46 |
| MS.gene058919 | MS.gene40068 | 0.815977 | 7.01E-52 | -1.69E-46 |
| MS.gene058979 | MS.gene40068 | 0.874356 | 7.20E-68 | -1.69E-46 |
| MS.gene05897 | MS.gene40068 | 0.831131 | 1.99E-55 | -1.69E-46 |
| MS.gene059272 | MS.gene40068 | 0.838616 | 2.59E-57 | -1.69E-46 |
| MS.gene059283 | MS.gene40068 | 0.811814 | 5.80E-51 | -1.69E-46 |
| MS.gene059438 | MS.gene40068 | 0.823514 | 1.33E-53 | -1.69E-46 |
| MS.gene059439 | MS.gene40068 | 0.86858 | 5.88E-66 | -1.69E-46 |
| MS.gene059440 | MS.gene40068 | 0.813405 | 2.60E-51 | -1.69E-46 |
| MS.gene059570 | MS.gene40068 | 0.841212 | 5.45E-58 | -1.69E-46 |
| MS.gene059584 | MS.gene40068 | 0.802715 | 4.92E-49 | -1.69E-46 |
| MS.gene059625 | MS.gene40068 | 0.817771 | 2.77E-52 | -1.69E-46 |
| MS.gene059725 | MS.gene40068 | 0.801115 | 1.05E-48 | -1.69E-46 |
| MS.gene05973 | MS.gene40068 | 0.812693 | 3.73E-51 | -1.69E-46 |
| MS.gene059842 | MS.gene40068 | 0.816828 | 4.52E-52 | -1.69E-46 |
| MS.gene05985 | MS.gene40068 | -0.814594 | 1.42E-51 | -1.69E-46 |
| MS.gene059965 | MS.gene40068 | 0.82441 | 8.19E-54 | -1.69E-46 |
| MS.gene060011 | MS.gene40068 | 0.83812 | 3.47E-57 | -1.69E-46 |
| MS.gene060167 | MS.gene40068 | 0.829229 | 5.79E-55 | -1.69E-46 |
| MS.gene060310 | MS.gene40068 | 0.808587 | 2.88E-50 | -1.69E-46 |
| MS.gene060312 | MS.gene40068 | 0.813414 | 2.59E-51 | -1.69E-46 |
| MS.gene060322 | MS.gene40068 | 0.81839 | 2.01E-52 | -1.69E-46 |
| MS.gene060365 | MS.gene40068 | 0.82 | 8.64E-53 | -1.69E-46 |
| MS.gene060373 | MS.gene40068 | 0.838965 | 2.10E-57 | -1.69E-46 |
| MS.gene060435 | MS.gene40068 | 0.81129 | 7.54E-51 | -1.69E-46 |
| MS.gene060521 | MS.gene40068 | 0.809174 | 2.16E-50 | -1.69E-46 |
| MS.gene060527 | MS.gene40068 | 0.808592 | 2.87E-50 | -1.69E-46 |
| MS.gene06052 | MS.gene40068 | 0.859983 | 2.83E-63 | -1.69E-46 |
| MS.gene060637 | MS.gene40068 | 0.801084 | 1.06E-48 | -1.69E-46 |
| MS.gene060777 | MS.gene40068 | 0.832114 | 1.14E-55 | -1.69E-46 |
| MS.gene060785 | MS.gene40068 | 0.816421 | 5.58E-52 | -1.69E-46 |
| MS.gene060840 | MS.gene40068 | 0.801403 | 9.15E-49 | -1.69E-46 |
| MS.gene060932 | MS.gene40068 | 0.807781 | 4.27E-50 | -1.69E-46 |
| MS.gene060933 | MS.gene40068 | 0.833705 | 4.57E-56 | -1.69E-46 |
| MS.gene060935 | MS.gene40068 | 0.855418 | 6.39E-62 | -1.69E-46 |
| MS.gene060937 | MS.gene40068 | 0.859187 | 4.92E-63 | -1.69E-46 |
| MS.gene060998 | MS.gene40068 | 0.803698 | 3.08E-49 | -1.69E-46 |
| MS.gene061188 | MS.gene40068 | 0.829807 | 4.19E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40068.t1 | MTR_5g005440 | 98.799 | 333 | 4 | 0 | 1 | 333 | 136 | 468 | 0.0 | 665 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40068.t1 | AT1G64990 | 84.384 | 333 | 52 | 0 | 1 | 333 | 136 | 468 | 0.0 | 531 |
| MS.gene40068.t1 | AT1G64990 | 84.384 | 333 | 52 | 0 | 1 | 333 | 136 | 468 | 0.0 | 531 |
| MS.gene40068.t1 | AT4G27630 | 85.285 | 333 | 48 | 1 | 1 | 333 | 136 | 467 | 0.0 | 529 |
| MS.gene40068.t1 | AT4G27630 | 84.639 | 332 | 51 | 0 | 2 | 333 | 17 | 348 | 0.0 | 525 |
| MS.gene40068.t1 | AT4G27630 | 84.639 | 332 | 51 | 0 | 2 | 333 | 17 | 348 | 0.0 | 525 |
| MS.gene40068.t1 | AT4G27630 | 79.552 | 357 | 48 | 2 | 1 | 333 | 136 | 491 | 0.0 | 516 |
| MS.gene40068.t1 | AT4G27630 | 82.008 | 239 | 42 | 1 | 1 | 239 | 136 | 373 | 1.41e-138 | 398 |
| MS.gene40068.t1 | AT4G27630 | 82.051 | 234 | 42 | 0 | 6 | 239 | 21 | 254 | 1.55e-138 | 394 |
| MS.gene40068.t1 | AT4G27630 | 82.008 | 239 | 42 | 1 | 1 | 239 | 136 | 373 | 2.27e-138 | 398 |
Find 63 sgRNAs with CRISPR-Local
Find 346 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTGGATGTTTATCAATT+TGG | 0.155871 | 5.4:-1064973 | None:intergenic |
| GCTTTCAAAGCAATTGTTCT+TGG | 0.239320 | 5.4:+1061186 | MS.gene40068:CDS |
| ATGGCTGTTCTATCTGGTTT+TGG | 0.288518 | 5.4:+1059246 | MS.gene40068:CDS |
| ACCGGTGATAAAAGTCAAAT+TGG | 0.292591 | 5.4:-1064880 | None:intergenic |
| ACTGTCATGGCTGTTCTATC+TGG | 0.294941 | 5.4:+1059240 | MS.gene40068:CDS |
| CCAATGCCATCACCTGATAA+AGG | 0.308808 | 5.4:+1059168 | None:intergenic |
| GACACTAACCTGAGATAATA+AGG | 0.315088 | 5.4:-1062455 | None:intergenic |
| GATTATCATTACAGAGGTAT+TGG | 0.353524 | 5.4:+1064847 | MS.gene40068:CDS |
| CCTCAATTGGTCAGTAGAAT+TGG | 0.365468 | 5.4:+1059204 | MS.gene40068:CDS |
| AACACACTTATACCTGTATT+CGG | 0.368811 | 5.4:-1064171 | None:intergenic |
| TTTCTTTACTATGCCTCAAT+TGG | 0.379528 | 5.4:+1059191 | MS.gene40068:CDS |
| GAAAATTATTCTCGCTCAAA+TGG | 0.382660 | 5.4:+1059389 | MS.gene40068:CDS |
| GAAACTAACCTTGCTCCTTC+TGG | 0.382664 | 5.4:-1059755 | None:intergenic |
| ATTATCATTACAGAGGTATT+GGG | 0.393721 | 5.4:+1064848 | MS.gene40068:CDS |
| CTGCTGCATATTCTCGAACT+TGG | 0.408126 | 5.4:+1061464 | MS.gene40068:CDS |
| ATAGTAAAGAAACCTTTATC+AGG | 0.415101 | 5.4:-1059180 | None:intergenic |
| CTCCTTCTGGTCCTCTTGCA+CGG | 0.431487 | 5.4:-1059742 | None:intergenic |
| GTCAGTAGAATTGGTGTCAT+TGG | 0.434768 | 5.4:+1059213 | MS.gene40068:CDS |
| TATATTTCCTTGCTATTCAT+CGG | 0.456786 | 5.4:+1063374 | MS.gene40068:CDS |
| GGAAACTGAGATCAAGGCCT+TGG | 0.461760 | 5.4:+1059320 | MS.gene40068:CDS |
| AAATGCAGCCTTATTATCTC+AGG | 0.465152 | 5.4:+1062447 | MS.gene40068:CDS |
| ATTCTTAACAAATTTAATGA+AGG | 0.466176 | 5.4:+1063424 | MS.gene40068:CDS |
| AAAGCTTAGCAACCGAATAC+AGG | 0.469068 | 5.4:+1064159 | MS.gene40068:CDS |
| AATACGTTTGATAAAAGATC+TGG | 0.470086 | 5.4:-1059700 | None:intergenic |
| AGGCATGGAAGCAGAGGTAC+TGG | 0.470967 | 5.4:+1061153 | MS.gene40068:CDS |
| GGACATATGCAGAATCTACT+AGG | 0.481782 | 5.4:+1061490 | MS.gene40068:CDS |
| TTGTGTGTATAAAATGATCA+AGG | 0.483771 | 5.4:+1061531 | MS.gene40068:CDS |
| CTTGCTATTCATCGGAATGT+TGG | 0.489185 | 5.4:+1063382 | MS.gene40068:CDS |
| CCTTTATCAGGTGATGGCAT+TGG | 0.491266 | 5.4:-1059168 | None:intergenic |
| AAGAGTGATAAATAACTGTA+TGG | 0.498599 | 5.4:-1059282 | None:intergenic |
| AAGTTACACTCACAATCAAT+TGG | 0.502259 | 5.4:-1064989 | None:intergenic |
| CTGCATAAGTTGTCTTTCCA+AGG | 0.506266 | 5.4:-1059337 | None:intergenic |
| GATTGAGGAAACTGAGATCA+AGG | 0.512109 | 5.4:+1059314 | MS.gene40068:CDS |
| GCTGTTTCAAGAGTTGGAAG+TGG | 0.519122 | 5.4:+1064059 | MS.gene40068:CDS |
| ACTCTTCATCAGAGAGATTG+AGG | 0.519209 | 5.4:+1059299 | MS.gene40068:CDS |
| AATGCGCAGATAGTAAAAGT+AGG | 0.522155 | 5.4:-1064940 | None:intergenic |
| TGTCATTGGTGTTACTGTCA+TGG | 0.534360 | 5.4:+1059227 | MS.gene40068:CDS |
| CCAATTCTACTGACCAATTG+AGG | 0.538924 | 5.4:-1059204 | None:intergenic |
| GTGGTTTGATGCAATATTTG+TGG | 0.542218 | 5.4:+1064901 | MS.gene40068:CDS |
| CTATGAGCTTCGACAAGCAA+AGG | 0.544516 | 5.4:+1061213 | MS.gene40068:CDS |
| AAAATATGTTCCCATTATCT+CGG | 0.545480 | 5.4:-1064111 | None:intergenic |
| TATTCTCGCTCAAATGGAGA+TGG | 0.549765 | 5.4:+1059395 | MS.gene40068:CDS |
| ATGCGCAGATAGTAAAAGTA+GGG | 0.557128 | 5.4:-1064939 | None:intergenic |
| AAGAAACCTTTATCAGGTGA+TGG | 0.558347 | 5.4:-1059174 | None:intergenic |
| ATACTTATCATCCTTGTCAC+GGG | 0.571650 | 5.4:-1062397 | None:intergenic |
| CTTATGCAGTCAATTGAGAC+TGG | 0.572440 | 5.4:+1059351 | MS.gene40068:CDS |
| GCATATTCTCGAACTTGGAA+AGG | 0.574715 | 5.4:+1061469 | MS.gene40068:CDS |
| ATGTGAAGATATCAAAGGCA+TGG | 0.581837 | 5.4:+1061138 | MS.gene40068:intron |
| GTTGAATGTGAAGATATCAA+AGG | 0.586462 | 5.4:+1061133 | MS.gene40068:intron |
| TATACTTATCATCCTTGTCA+CGG | 0.589557 | 5.4:-1062398 | None:intergenic |
| CAGATAGTAAAAGTAGGGAA+AGG | 0.591096 | 5.4:-1064934 | None:intergenic |
| CAAGAGGACCAGAAGGAGCA+AGG | 0.594045 | 5.4:+1059747 | MS.gene40068:CDS |
| AGTTGTTCGATCCGTGCAAG+AGG | 0.594350 | 5.4:+1059731 | MS.gene40068:CDS |
| CAAATATTGCATCAAACCAC+CGG | 0.610784 | 5.4:-1064898 | None:intergenic |
| TATCAAAGGCATGGAAGCAG+AGG | 0.616520 | 5.4:+1061147 | MS.gene40068:CDS |
| ATCCGTGCAAGAGGACCAGA+AGG | 0.621117 | 5.4:+1059740 | MS.gene40068:CDS |
| GTTCAGTTGATCCCGTGACA+AGG | 0.624543 | 5.4:+1062386 | MS.gene40068:CDS |
| CAACATTCCGATGAATAGCA+AGG | 0.630088 | 5.4:-1063381 | None:intergenic |
| GAACAAGCAAGGATCTGAAG+AGG | 0.635624 | 5.4:+1059419 | MS.gene40068:CDS |
| ATGGAGATGGAGAACAAGCA+AGG | 0.635747 | 5.4:+1059408 | MS.gene40068:CDS |
| ATCATTACAGAGGTATTGGG+CGG | 0.644393 | 5.4:+1064851 | MS.gene40068:CDS |
| TGACAGGATTATCATTACAG+AGG | 0.676858 | 5.4:+1064841 | MS.gene40068:intron |
| TTGGTTGTGATATCAGTGCG+TGG | 0.694691 | 5.4:+1063401 | MS.gene40068:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAGAATAAAATATGATAT+AGG | + | chr5.4:1063627-1063646 | MS.gene40068:intron | 10.0% |
| !! | AAAGAAAATTATTGAATATA+AGG | + | chr5.4:1063785-1063804 | MS.gene40068:intron | 10.0% |
| !! | AATATCAAATAGAAAAAAAT+AGG | - | chr5.4:1063488-1063507 | None:intergenic | 10.0% |
| !! | AATAAAACCTATAAAGAAAA+TGG | - | chr5.4:1059617-1059636 | None:intergenic | 15.0% |
| !! | AATATATTGCTAATTGTATT+AGG | + | chr5.4:1061775-1061794 | MS.gene40068:intron | 15.0% |
| !! | ATATTTATCCTAATCAATTT+AGG | - | chr5.4:1062646-1062665 | None:intergenic | 15.0% |
| !! | ATTCTTAACAAATTTAATGA+AGG | + | chr5.4:1063424-1063443 | MS.gene40068:CDS | 15.0% |
| !! | GGAAAAAAAGTAATTATATT+TGG | - | chr5.4:1062299-1062318 | None:intergenic | 15.0% |
| !! | TATAAACAAAAAGAATTCTT+AGG | - | chr5.4:1063003-1063022 | None:intergenic | 15.0% |
| !!! | AATATTTTAATTGATATGCA+TGG | + | chr5.4:1064326-1064345 | MS.gene40068:intron | 15.0% |
| !!! | ATATTTTATATGCTAGATTA+AGG | + | chr5.4:1061584-1061603 | MS.gene40068:intron | 15.0% |
| !!! | TTATCATTATTTTTTACCTT+AGG | + | chr5.4:1063146-1063165 | MS.gene40068:intron | 15.0% |
| !!! | TTTTTCTATTTGATATTTCT+TGG | + | chr5.4:1063491-1063510 | MS.gene40068:intron | 15.0% |
| !! | AAAATTTACTGTAGTCAATA+TGG | + | chr5.4:1062190-1062209 | MS.gene40068:intron | 20.0% |
| !! | AAATCAGAAATACTGAATTT+AGG | + | chr5.4:1064374-1064393 | MS.gene40068:intron | 20.0% |
| !! | AATTATATTGACATTTCCTT+TGG | + | chr5.4:1059523-1059542 | MS.gene40068:intron | 20.0% |
| !! | AGCAACAAAAAAGAAATTTA+AGG | - | chr5.4:1062743-1062762 | None:intergenic | 20.0% |
| !! | ATGATAGTACAAATATTCAA+AGG | + | chr5.4:1060132-1060151 | MS.gene40068:intron | 20.0% |
| !! | CAAAACAAAAATTTGAACTT+AGG | - | chr5.4:1064022-1064041 | None:intergenic | 20.0% |
| !! | CTGAATGTATAGATATAAAT+AGG | - | chr5.4:1064640-1064659 | None:intergenic | 20.0% |
| !! | GAAACATATAAATTGAGAAA+TGG | - | chr5.4:1060880-1060899 | None:intergenic | 20.0% |
| !! | GAATTTAGTACAATGTTTAA+TGG | + | chr5.4:1060175-1060194 | MS.gene40068:intron | 20.0% |
| !! | TAGATATAAATAGGATTGAA+AGG | - | chr5.4:1064631-1064650 | None:intergenic | 20.0% |
| !! | TATTAAAATTGTGAAACCAA+AGG | - | chr5.4:1059542-1059561 | None:intergenic | 20.0% |
| !! | TCTTTAAATAAGAATGCATT+AGG | - | chr5.4:1062524-1062543 | None:intergenic | 20.0% |
| !! | TGAAGTGATTCATTTAATAA+TGG | + | chr5.4:1061027-1061046 | MS.gene40068:intron | 20.0% |
| !! | TGAATATCCAATAAAGAAAA+AGG | - | chr5.4:1060844-1060863 | None:intergenic | 20.0% |
| !!! | AAAATTTATATCTCTAAAGC+AGG | - | chr5.4:1059811-1059830 | None:intergenic | 20.0% |
| !!! | AAGTTTTCCTTTTTCTTTAT+TGG | + | chr5.4:1060834-1060853 | MS.gene40068:intron | 20.0% |
| !!! | AATACATATTGGAAGTTTTA+AGG | + | chr5.4:1063573-1063592 | MS.gene40068:intron | 20.0% |
| !!! | ATGTTTCCTTTTTATCAAAA+TGG | + | chr5.4:1060893-1060912 | MS.gene40068:intron | 20.0% |
| !!! | CATTTTATACACACAATAAA+CGG | - | chr5.4:1061527-1061546 | None:intergenic | 20.0% |
| !!! | CTAAGTTCAAATTTTTGTTT+TGG | + | chr5.4:1064020-1064039 | MS.gene40068:intron | 20.0% |
| !!! | CTATTTTCCAGTTTTTTTAA+AGG | - | chr5.4:1061280-1061299 | None:intergenic | 20.0% |
| !!! | GATTTTTTTCACACAAATTA+AGG | - | chr5.4:1062028-1062047 | None:intergenic | 20.0% |
| !!! | TATCTTCTATTCTTTTAATC+AGG | + | chr5.4:1064135-1064154 | MS.gene40068:CDS | 20.0% |
| !!! | TGCTTTAGAGATATAAATTT+TGG | + | chr5.4:1059810-1059829 | MS.gene40068:intron | 20.0% |
| !!! | TGTTTCCTTTTTATCAAAAT+GGG | + | chr5.4:1060894-1060913 | MS.gene40068:intron | 20.0% |
| !!! | TTCTTTTGTTTTATTTAAGC+TGG | - | chr5.4:1063936-1063955 | None:intergenic | 20.0% |
| ! | AAAATATGTTCCCATTATCT+CGG | - | chr5.4:1064114-1064133 | None:intergenic | 25.0% |
| ! | AAATCTGCTTACTATGAAAA+TGG | + | chr5.4:1061423-1061442 | MS.gene40068:intron | 25.0% |
| ! | AAGAGTGATAAATAACTGTA+TGG | - | chr5.4:1059285-1059304 | None:intergenic | 25.0% |
| ! | AAGGTTTACTTAAACGTTAT+TGG | - | chr5.4:1064612-1064631 | None:intergenic | 25.0% |
| ! | AATAAATAGTTTCTGTTGAG+TGG | - | chr5.4:1064231-1064250 | None:intergenic | 25.0% |
| ! | AATACGTTTGATAAAAGATC+TGG | - | chr5.4:1059703-1059722 | None:intergenic | 25.0% |
| ! | AATGAATAATATACCTCTTC+TGG | + | chr5.4:1063694-1063713 | MS.gene40068:intron | 25.0% |
| ! | AATTTACCAAAATATCCATG+TGG | + | chr5.4:1061857-1061876 | MS.gene40068:intron | 25.0% |
| ! | ACCATTTACGAAATACATAT+TGG | + | chr5.4:1063562-1063581 | MS.gene40068:intron | 25.0% |
| ! | ACTTATTTGCATGATTGAAA+GGG | - | chr5.4:1060925-1060944 | None:intergenic | 25.0% |
| ! | AGAGCATATCAATATTGTTT+GGG | - | chr5.4:1063741-1063760 | None:intergenic | 25.0% |
| ! | ATAAGAATGCATTAGGTTTA+AGG | - | chr5.4:1062517-1062536 | None:intergenic | 25.0% |
| ! | ATAAGTTCCAAGATATCAAA+TGG | - | chr5.4:1062906-1062925 | None:intergenic | 25.0% |
| ! | ATACAAATTCTAGTCAACAA+AGG | - | chr5.4:1063299-1063318 | None:intergenic | 25.0% |
| ! | ATAGTAAAGAAACCTTTATC+AGG | - | chr5.4:1059183-1059202 | None:intergenic | 25.0% |
| ! | ATTCATATTCTCCATGAAAA+TGG | - | chr5.4:1064546-1064565 | None:intergenic | 25.0% |
| ! | CAAAGACATAAAATAGTGAA+TGG | - | chr5.4:1062712-1062731 | None:intergenic | 25.0% |
| ! | CAATTGGATGTTTATCAATT+TGG | - | chr5.4:1064976-1064995 | None:intergenic | 25.0% |
| ! | CTGAATAAAGCTTATGATAT+GGG | + | chr5.4:1061827-1061846 | MS.gene40068:intron | 25.0% |
| ! | GAGACAATATATGAACAATA+GGG | + | chr5.4:1064422-1064441 | MS.gene40068:intron | 25.0% |
| ! | GTAGTTGCAGAAAATTATAA+AGG | + | chr5.4:1060213-1060232 | MS.gene40068:intron | 25.0% |
| ! | TAAGAATGCATTAGGTTTAA+GGG | - | chr5.4:1062516-1062535 | None:intergenic | 25.0% |
| ! | TAAGTTCCAAGATATCAAAT+GGG | - | chr5.4:1062905-1062924 | None:intergenic | 25.0% |
| ! | TACTTATTTGCATGATTGAA+AGG | - | chr5.4:1060926-1060945 | None:intergenic | 25.0% |
| ! | TATAAACCCATTTGATATCT+TGG | + | chr5.4:1062896-1062915 | MS.gene40068:intron | 25.0% |
| ! | TATTCTGTTATGATCATATG+TGG | + | chr5.4:1063071-1063090 | MS.gene40068:intron | 25.0% |
| ! | TATTGTTCATATATTGTCTC+CGG | - | chr5.4:1064422-1064441 | None:intergenic | 25.0% |
| ! | TATTTCATGCCTTAATTCTT+TGG | + | chr5.4:1060300-1060319 | MS.gene40068:intron | 25.0% |
| ! | TCACCAACTATTATAACTTT+GGG | + | chr5.4:1060014-1060033 | MS.gene40068:intron | 25.0% |
| ! | TCCAATATGTATTTCGTAAA+TGG | - | chr5.4:1063566-1063585 | None:intergenic | 25.0% |
| ! | TCTTAGGAAATTACATTCAA+TGG | - | chr5.4:1062987-1063006 | None:intergenic | 25.0% |
| ! | TTCACCAACTATTATAACTT+TGG | + | chr5.4:1060013-1060032 | MS.gene40068:intron | 25.0% |
| ! | TTCCAATATCAAAAAACTGT+AGG | - | chr5.4:1062426-1062445 | None:intergenic | 25.0% |
| ! | TTGTGTGTATAAAATGATCA+AGG | + | chr5.4:1061531-1061550 | MS.gene40068:CDS | 25.0% |
| ! | TTTCCCAAAGTTATAATAGT+TGG | - | chr5.4:1060020-1060039 | None:intergenic | 25.0% |
| !! | AACTATTATAACTTTGGGAA+AGG | + | chr5.4:1060019-1060038 | MS.gene40068:intron | 25.0% |
| !! | AAGAGCATATCAATATTGTT+TGG | - | chr5.4:1063742-1063761 | None:intergenic | 25.0% |
| !! | ACTTTGTCCTAATTTTTGTT+AGG | - | chr5.4:1061928-1061947 | None:intergenic | 25.0% |
| !! | ATTGTTTAGAATTCAACTCA+AGG | + | chr5.4:1064673-1064692 | MS.gene40068:intron | 25.0% |
| !! | CTGATAATGTGTTTCAATAT+AGG | + | chr5.4:1062360-1062379 | MS.gene40068:intron | 25.0% |
| !! | CTTTGTCCTAATTTTTGTTA+GGG | - | chr5.4:1061927-1061946 | None:intergenic | 25.0% |
| !! | GTTTCCTTTTTATCAAAATG+GGG | + | chr5.4:1060895-1060914 | MS.gene40068:intron | 25.0% |
| !! | TCTTTTATCAAACGTATTGT+TGG | + | chr5.4:1059705-1059724 | MS.gene40068:CDS | 25.0% |
| !! | TTTATTCCTTTCTTGTTTAC+TGG | + | chr5.4:1064245-1064264 | MS.gene40068:intron | 25.0% |
| !! | TTTGTTGACTAGAATTTGTA+TGG | + | chr5.4:1063298-1063317 | MS.gene40068:intron | 25.0% |
| !!! | ACAGTTTTTTGTGATGATAT+CGG | - | chr5.4:1061249-1061268 | None:intergenic | 25.0% |
| !!! | ACATGATTTGTTTTTACTAC+TGG | + | chr5.4:1061001-1061020 | MS.gene40068:intron | 25.0% |
| !!! | ATGGCTTTTTCAAGAATAAA+AGG | - | chr5.4:1059780-1059799 | None:intergenic | 25.0% |
| !!! | ATTATCATTACAGAGGTATT+GGG | + | chr5.4:1064848-1064867 | MS.gene40068:CDS | 25.0% |
| !!! | ATTTTTAGTTTAGCATCAGT+CGG | - | chr5.4:1061708-1061727 | None:intergenic | 25.0% |
| !!! | CTTGTTATTTTTCAACTTGA+CGG | - | chr5.4:1063961-1063980 | None:intergenic | 25.0% |
| !!! | TAGCAGCAATAGTATTTTAA+TGG | + | chr5.4:1062142-1062161 | MS.gene40068:intron | 25.0% |
| !!! | TATATTTCCTTGCTATTCAT+CGG | + | chr5.4:1063374-1063393 | MS.gene40068:CDS | 25.0% |
| !!! | TGGAATTTTTTGCTCAAATT+GGG | + | chr5.4:1060966-1060985 | MS.gene40068:intron | 25.0% |
| !!! | TGTAAAGCCATTTTCTTTAT+AGG | + | chr5.4:1059607-1059626 | MS.gene40068:intron | 25.0% |
| !!! | TGTGTTGATTGATTCAAATT+TGG | + | chr5.4:1064737-1064756 | MS.gene40068:intron | 25.0% |
| !!! | TTCCTACAGTTTTTTGATAT+TGG | + | chr5.4:1062421-1062440 | MS.gene40068:CDS | 25.0% |
| !!! | TTGGAATTTTTTGCTCAAAT+TGG | + | chr5.4:1060965-1060984 | MS.gene40068:intron | 25.0% |
| !!! | TTTTTTTATCTTTTGCCACT+CGG | + | chr5.4:1059447-1059466 | MS.gene40068:intron | 25.0% |
| AACACACTTATACCTGTATT+CGG | - | chr5.4:1064174-1064193 | None:intergenic | 30.0% | |
| AACTCTTTGACTCATTACAA+TGG | + | chr5.4:1060375-1060394 | MS.gene40068:intron | 30.0% | |
| AAGGAACTGAACTTGATTAA+TGG | + | chr5.4:1060151-1060170 | MS.gene40068:intron | 30.0% | |
| AAGTATATTACCGTGTTGAA+AGG | + | chr5.4:1062076-1062095 | MS.gene40068:intron | 30.0% | |
| AATGAGTCAAAGAGTTGAAA+AGG | - | chr5.4:1060371-1060390 | None:intergenic | 30.0% | |
| ACAGTTCCCTAACAAAAATT+AGG | + | chr5.4:1061918-1061937 | MS.gene40068:intron | 30.0% | |
| ACTCTTTGACTCATTACAAT+GGG | + | chr5.4:1060376-1060395 | MS.gene40068:intron | 30.0% | |
| AGGAACTGAACTTGATTAAT+GGG | + | chr5.4:1060152-1060171 | MS.gene40068:intron | 30.0% | |
| AGTACATGTGATAAGTAACT+AGG | - | chr5.4:1063112-1063131 | None:intergenic | 30.0% | |
| ATAGTTTGGATAAACATCCT+AGG | + | chr5.4:1064777-1064796 | MS.gene40068:intron | 30.0% | |
| ATGAAAATGAACCAAACTTC+TGG | - | chr5.4:1061962-1061981 | None:intergenic | 30.0% | |
| ATGAGATTCAGACTAAAAGA+TGG | - | chr5.4:1062320-1062339 | None:intergenic | 30.0% | |
| ATGAGTCAAAGAGTTGAAAA+GGG | - | chr5.4:1060370-1060389 | None:intergenic | 30.0% | |
| ATTCCAATCATACTGAAACA+TGG | - | chr5.4:1060952-1060971 | None:intergenic | 30.0% | |
| ATTCTAGTCAACAAAGGAAA+AGG | - | chr5.4:1063293-1063312 | None:intergenic | 30.0% | |
| ATTTCTGTAGCTTCTATATG+AGG | + | chr5.4:1060553-1060572 | MS.gene40068:intron | 30.0% | |
| CAAACTAATGTTTGTAATGG+TGG | + | chr5.4:1061616-1061635 | MS.gene40068:intron | 30.0% | |
| CAAGTTCAATCACATTAAGA+TGG | - | chr5.4:1061378-1061397 | None:intergenic | 30.0% | |
| CAATCTAGGAAATTTGAATG+TGG | - | chr5.4:1060347-1060366 | None:intergenic | 30.0% | |
| CATCTTAATGTGATTGAACT+TGG | + | chr5.4:1061376-1061395 | MS.gene40068:intron | 30.0% | |
| CATTATTTCAGTGGTGATAA+GGG | - | chr5.4:1063894-1063913 | None:intergenic | 30.0% | |
| CCTGAATAAAGCTTATGATA+TGG | + | chr5.4:1061826-1061845 | MS.gene40068:intron | 30.0% | |
| CTTGTTTACTGAAGAATGTA+AGG | + | chr5.4:1062792-1062811 | MS.gene40068:intron | 30.0% | |
| GAAAATTATTCTCGCTCAAA+TGG | + | chr5.4:1059389-1059408 | MS.gene40068:CDS | 30.0% | |
| GAGTGGCAAAAGATAAAAAA+AGG | - | chr5.4:1059448-1059467 | None:intergenic | 30.0% | |
| GATATCATCACAAAAAACTG+TGG | + | chr5.4:1061248-1061267 | MS.gene40068:intron | 30.0% | |
| GATCAACAAAAAGTGAACAA+AGG | - | chr5.4:1062829-1062848 | None:intergenic | 30.0% | |
| GCAAAAAACCAACTAACTAA+AGG | + | chr5.4:1060520-1060539 | MS.gene40068:intron | 30.0% | |
| GGACAAACTAATGTTTGTAA+TGG | + | chr5.4:1061613-1061632 | MS.gene40068:intron | 30.0% | |
| GGACTCTTATAAATAAGAGA+AGG | - | chr5.4:1060326-1060345 | None:intergenic | 30.0% | |
| GGAGACAATATATGAACAAT+AGG | + | chr5.4:1064421-1064440 | MS.gene40068:intron | 30.0% | |
| GTACATGTGATAAGTAACTA+GGG | - | chr5.4:1063111-1063130 | None:intergenic | 30.0% | |
| GTATTAACTAGAAATTGAGC+AGG | + | chr5.4:1060052-1060071 | MS.gene40068:intron | 30.0% | |
| GTGTAGGAATAGTTATAGTT+TGG | + | chr5.4:1064763-1064782 | MS.gene40068:intron | 30.0% | |
| GTTGAATGTGAAGATATCAA+AGG | + | chr5.4:1061133-1061152 | MS.gene40068:intron | 30.0% | |
| TAAACAAAAACTGTGTACTG+AGG | + | chr5.4:1059869-1059888 | MS.gene40068:intron | 30.0% | |
| TAATAGAGATCTCAGTACAA+TGG | - | chr5.4:1062869-1062888 | None:intergenic | 30.0% | |
| TAATGTGTTTCAATATAGGC+TGG | + | chr5.4:1062364-1062383 | MS.gene40068:intron | 30.0% | |
| TAGTGGTTTATGTGTTTAGT+TGG | + | chr5.4:1059958-1059977 | MS.gene40068:intron | 30.0% | |
| TATACTTATCATCCTTGTCA+CGG | - | chr5.4:1062401-1062420 | None:intergenic | 30.0% | |
| TATCATTACACCCATCAATA+AGG | - | chr5.4:1060118-1060137 | None:intergenic | 30.0% | |
| TATGCTAGATTAAGGTTTCT+TGG | + | chr5.4:1061592-1061611 | MS.gene40068:intron | 30.0% | |
| TATTGGATATTCAGAGAGAT+TGG | + | chr5.4:1060851-1060870 | MS.gene40068:intron | 30.0% | |
| TATTTCTTGGATAGTTGCTA+AGG | + | chr5.4:1063504-1063523 | MS.gene40068:intron | 30.0% | |
| TCGTGTGAAACTTTCTTATT+TGG | + | chr5.4:1063033-1063052 | MS.gene40068:intron | 30.0% | |
| TGAAAATGAACCAAACTTCT+GGG | - | chr5.4:1061961-1061980 | None:intergenic | 30.0% | |
| TTACCATGTTTCAGTATGAT+TGG | + | chr5.4:1060946-1060965 | MS.gene40068:intron | 30.0% | |
| TTGCATTGTAGAATAGATGA+TGG | + | chr5.4:1062481-1062500 | MS.gene40068:intron | 30.0% | |
| TTTCTTTACTATGCCTCAAT+TGG | + | chr5.4:1059191-1059210 | MS.gene40068:CDS | 30.0% | |
| ! | AAAAGGATTGCCTTATTGAT+GGG | + | chr5.4:1060105-1060124 | MS.gene40068:intron | 30.0% |
| ! | AAAGCACCACATATAAACTA+GGG | - | chr5.4:1063212-1063231 | None:intergenic | 30.0% |
| ! | AATAACGCTTGAGTTTTTCA+AGG | + | chr5.4:1059983-1060002 | MS.gene40068:intron | 30.0% |
| ! | ACAAGTTTGAGTTATGGAAT+CGG | + | chr5.4:1060716-1060735 | MS.gene40068:intron | 30.0% |
| ! | AGCTTTTCGTTAGGTATAAA+TGG | + | chr5.4:1061644-1061663 | MS.gene40068:intron | 30.0% |
| ! | ATACAGGTATAAGTGTGTTT+TGG | + | chr5.4:1064175-1064194 | MS.gene40068:intron | 30.0% |
| ! | ATCAATATTGTTTGGGACTT+GGG | - | chr5.4:1063734-1063753 | None:intergenic | 30.0% |
| ! | ATTCTTTTGTATATCATCCC+AGG | - | chr5.4:1063615-1063634 | None:intergenic | 30.0% |
| ! | GATGATTTGCATTTATGTAG+TGG | + | chr5.4:1059941-1059960 | MS.gene40068:intron | 30.0% |
| ! | GATTATCATTACAGAGGTAT+TGG | + | chr5.4:1064847-1064866 | MS.gene40068:CDS | 30.0% |
| ! | TATCAATATTGTTTGGGACT+TGG | - | chr5.4:1063735-1063754 | None:intergenic | 30.0% |
| ! | TTCAGTATTTCTGATTTAGC+AGG | - | chr5.4:1064371-1064390 | None:intergenic | 30.0% |
| !! | CCATATCATAAGCTTTATTC+AGG | - | chr5.4:1061829-1061848 | None:intergenic | 30.0% |
| !! | CGTCAAGTTGAAAAATAACA+AGG | + | chr5.4:1063959-1063978 | MS.gene40068:intron | 30.0% |
| !! | TCCAATTTGACTTTTATCAC+CGG | + | chr5.4:1064879-1064898 | MS.gene40068:CDS | 30.0% |
| !!! | CAAGATTTGTTTTGACAGAA+TGG | + | chr5.4:1064476-1064495 | MS.gene40068:intron | 30.0% |
| !!! | CTTTTTTGTTGCTTTGTATG+AGG | + | chr5.4:1062750-1062769 | MS.gene40068:intron | 30.0% |
| !!! | GAATTTTTTGCTCAAATTGG+GGG | + | chr5.4:1060968-1060987 | MS.gene40068:intron | 30.0% |
| !!! | GGAATTTTTTGCTCAAATTG+GGG | + | chr5.4:1060967-1060986 | MS.gene40068:intron | 30.0% |
| !!! | TTTTTTGCTGTTTCAAGAGT+TGG | + | chr5.4:1064053-1064072 | MS.gene40068:CDS | 30.0% |
| AAATGTCCACTTTGACAGAA+TGG | + | chr5.4:1063844-1063863 | MS.gene40068:intron | 35.0% | |
| AACTAGAAATTGAGCAGGAA+GGG | + | chr5.4:1060057-1060076 | MS.gene40068:intron | 35.0% | |
| AAGAAACCTTTATCAGGTGA+TGG | - | chr5.4:1059177-1059196 | None:intergenic | 35.0% | |
| AAGAGAAGGCCAAAGAATTA+AGG | - | chr5.4:1060312-1060331 | None:intergenic | 35.0% | |
| AATAGTTTCTGTTGAGTGGA+TGG | - | chr5.4:1064227-1064246 | None:intergenic | 35.0% | |
| AATGCGCAGATAGTAAAAGT+AGG | - | chr5.4:1064943-1064962 | None:intergenic | 35.0% | |
| ACCGGTGATAAAAGTCAAAT+TGG | - | chr5.4:1064883-1064902 | None:intergenic | 35.0% | |
| AGATAAATGCTGATCATCCT+AGG | - | chr5.4:1064797-1064816 | None:intergenic | 35.0% | |
| ATAATGAAGTTGACTGCCTA+AGG | - | chr5.4:1063165-1063184 | None:intergenic | 35.0% | |
| ATACTTATCATCCTTGTCAC+GGG | - | chr5.4:1062400-1062419 | None:intergenic | 35.0% | |
| ATGAGCTGACGTTATTAAGT+GGG | + | chr5.4:1062589-1062608 | MS.gene40068:intron | 35.0% | |
| ATGCGCAGATAGTAAAAGTA+GGG | - | chr5.4:1064942-1064961 | None:intergenic | 35.0% | |
| ATGTGAAGATATCAAAGGCA+TGG | + | chr5.4:1061138-1061157 | MS.gene40068:intron | 35.0% | |
| ATTATTCCTTTATCCATGCC+AGG | - | chr5.4:1063672-1063691 | None:intergenic | 35.0% | |
| ATTTGCATGATTGAAAGGGA+CGG | - | chr5.4:1060921-1060940 | None:intergenic | 35.0% | |
| CAAATATTGCATCAAACCAC+CGG | - | chr5.4:1064901-1064920 | None:intergenic | 35.0% | |
| CAATCACATTAAGATGGAGT+TGG | - | chr5.4:1061372-1061391 | None:intergenic | 35.0% | |
| CACATGAAAGTAACTGCTAA+AGG | - | chr5.4:1060685-1060704 | None:intergenic | 35.0% | |
| CAGATAGTAAAAGTAGGGAA+AGG | - | chr5.4:1064937-1064956 | None:intergenic | 35.0% | |
| CATCTATTCTACAATGCAAC+TGG | - | chr5.4:1062480-1062499 | None:intergenic | 35.0% | |
| CCATTATTTCAGTGGTGATA+AGG | - | chr5.4:1063895-1063914 | None:intergenic | 35.0% | |
| CCTTATCACCACTGAAATAA+TGG | + | chr5.4:1063892-1063911 | MS.gene40068:intron | 35.0% | |
| CGAGAGAAAAGTGAAACATA+AGG | + | chr5.4:1064514-1064533 | MS.gene40068:intron | 35.0% | |
| CTAATGCACAGATTACTAGT+AGG | - | chr5.4:1064305-1064324 | None:intergenic | 35.0% | |
| CTTTGCAATGACTGCAAAAA+AGG | - | chr5.4:1062229-1062248 | None:intergenic | 35.0% | |
| GAAAATGGTTTCAACTATGC+AGG | + | chr5.4:1061438-1061457 | MS.gene40068:intron | 35.0% | |
| GAAATTCTCGCAGAAACAAA+AGG | + | chr5.4:1060088-1060107 | MS.gene40068:intron | 35.0% | |
| GAACAGGAACACAAAGTAAA+AGG | - | chr5.4:1059642-1059661 | None:intergenic | 35.0% | |
| GACACTAACCTGAGATAATA+AGG | - | chr5.4:1062458-1062477 | None:intergenic | 35.0% | |
| GAGTAGACAATTTACATTCC+TGG | + | chr5.4:1063651-1063670 | MS.gene40068:intron | 35.0% | |
| GCATGTGTCCTAAATTGATT+AGG | + | chr5.4:1062635-1062654 | MS.gene40068:intron | 35.0% | |
| GCTTTCAAAGCAATTGTTCT+TGG | + | chr5.4:1061186-1061205 | MS.gene40068:CDS | 35.0% | |
| GGAACTGAACTTGATTAATG+GGG | + | chr5.4:1060153-1060172 | MS.gene40068:intron | 35.0% | |
| GTGGTTTGATGCAATATTTG+TGG | + | chr5.4:1064901-1064920 | MS.gene40068:CDS | 35.0% | |
| GTTGGAAAATAACTCAGTCT+TGG | - | chr5.4:1060444-1060463 | None:intergenic | 35.0% | |
| TAACTAGAAATTGAGCAGGA+AGG | + | chr5.4:1060056-1060075 | MS.gene40068:intron | 35.0% | |
| TAGACATGCCTTTAGTTAGT+TGG | - | chr5.4:1060531-1060550 | None:intergenic | 35.0% | |
| TATGAGCTGACGTTATTAAG+TGG | + | chr5.4:1062588-1062607 | MS.gene40068:intron | 35.0% | |
| TATTTCGTAAATGGTTACGC+TGG | - | chr5.4:1063557-1063576 | None:intergenic | 35.0% | |
| TCAGGTTCAGATTTATGAGT+TGG | - | chr5.4:1061811-1061830 | None:intergenic | 35.0% | |
| TCTAGTGTGACACTCATAAT+AGG | + | chr5.4:1062046-1062065 | MS.gene40068:intron | 35.0% | |
| TCTGATCTGAATTCATTGAC+AGG | + | chr5.4:1064825-1064844 | MS.gene40068:intron | 35.0% | |
| TGACAGGATTATCATTACAG+AGG | + | chr5.4:1064841-1064860 | MS.gene40068:intron | 35.0% | |
| TTCGTTAGGTATAAATGGCT+CGG | + | chr5.4:1061649-1061668 | MS.gene40068:intron | 35.0% | |
| TTTGCTCGTCAGTTAGTAAA+CGG | - | chr5.4:1060505-1060524 | None:intergenic | 35.0% | |
| ! | CAAAAGGATTGCCTTATTGA+TGG | + | chr5.4:1060104-1060123 | MS.gene40068:intron | 35.0% |
| ! | CAGATTTATGAGTTGGAACT+TGG | - | chr5.4:1061804-1061823 | None:intergenic | 35.0% |
| ! | GCGTTGACCTTTAAAAAAAC+TGG | + | chr5.4:1061270-1061289 | MS.gene40068:intron | 35.0% |
| ! | TGTTCATATTTTCAGCCACA+TGG | - | chr5.4:1061875-1061894 | None:intergenic | 35.0% |
| ! | TTTCAGCCACATGGATATTT+TGG | - | chr5.4:1061866-1061885 | None:intergenic | 35.0% |
| !! | AAATGCAGCCTTATTATCTC+AGG | + | chr5.4:1062447-1062466 | MS.gene40068:CDS | 35.0% |
| !! | AACAAAAGGCTTTGAAGTTG+GGG | + | chr5.4:1060650-1060669 | MS.gene40068:intron | 35.0% |
| !! | AATTTGACTTTTATCACCGG+TGG | + | chr5.4:1064882-1064901 | MS.gene40068:CDS | 35.0% |
| !! | CAACAAAAGGCTTTGAAGTT+GGG | + | chr5.4:1060649-1060668 | MS.gene40068:intron | 35.0% |
| !! | GAAAGCACCACATATAAACT+AGG | - | chr5.4:1063213-1063232 | None:intergenic | 35.0% |
| !! | GGCATTTTCGATCTTTTTTG+TGG | + | chr5.4:1063525-1063544 | MS.gene40068:intron | 35.0% |
| !! | TTCAAAGCCTTTTGTTGCTT+TGG | - | chr5.4:1060646-1060665 | None:intergenic | 35.0% |
| !!! | CTGTTTTTGTCCGAGATAAT+GGG | + | chr5.4:1064101-1064120 | MS.gene40068:CDS | 35.0% |
| !!! | GCAAAGTGTTGTTTTCAAAC+AGG | + | chr5.4:1062243-1062262 | MS.gene40068:CDS | 35.0% |
| !!! | TAAGGTTGTTGCCATTTTCA+TGG | + | chr5.4:1064532-1064551 | MS.gene40068:intron | 35.0% |
| !!! | TCTGTTTTTGTCCGAGATAA+TGG | + | chr5.4:1064100-1064119 | MS.gene40068:CDS | 35.0% |
| AAACAACCAGACTCTTGCTT+CGG | - | chr5.4:1064709-1064728 | None:intergenic | 40.0% | |
| AAACTTGTGCTATCCAGTCA+TGG | - | chr5.4:1060820-1060839 | None:intergenic | 40.0% | |
| AAAGCTTAGCAACCGAATAC+AGG | + | chr5.4:1064159-1064178 | MS.gene40068:CDS | 40.0% | |
| ACTATGTTGTGACACCTGTA+CGG | + | chr5.4:1062113-1062132 | MS.gene40068:intron | 40.0% | |
| ACTCTTCATCAGAGAGATTG+AGG | + | chr5.4:1059299-1059318 | MS.gene40068:CDS | 40.0% | |
| AGAGTTGAAAAGGGCAATCT+AGG | - | chr5.4:1060361-1060380 | None:intergenic | 40.0% | |
| AGATTGTCTAGTACCAGAAG+AGG | - | chr5.4:1063710-1063729 | None:intergenic | 40.0% | |
| AGCTCTCCCTAGTTTATATG+TGG | + | chr5.4:1063203-1063222 | MS.gene40068:intron | 40.0% | |
| AGGAGAGTAACAGAAGACTA+TGG | - | chr5.4:1063253-1063272 | None:intergenic | 40.0% | |
| AGGCAGAATAAGTAGACAGT+TGG | - | chr5.4:1060462-1060481 | None:intergenic | 40.0% | |
| AGGTGTATGAGAGAAGAACT+AGG | - | chr5.4:1063273-1063292 | None:intergenic | 40.0% | |
| AGGTTGCCTACAATAACTCA+TGG | + | chr5.4:1060759-1060778 | MS.gene40068:intron | 40.0% | |
| AGTTCAGATGAAGCTAGAAC+AGG | - | chr5.4:1059658-1059677 | None:intergenic | 40.0% | |
| ATGAGCTCCAAAGCAACAAA+AGG | + | chr5.4:1060636-1060655 | MS.gene40068:intron | 40.0% | |
| CAAAAACAGAACAACGTTGC+TGG | - | chr5.4:1064090-1064109 | None:intergenic | 40.0% | |
| CAACATTCCGATGAATAGCA+AGG | - | chr5.4:1063384-1063403 | None:intergenic | 40.0% | |
| CCAAAGCCAGTAAACAAGAA+AGG | - | chr5.4:1064254-1064273 | None:intergenic | 40.0% | |
| CCAATTCTACTGACCAATTG+AGG | - | chr5.4:1059207-1059226 | None:intergenic | 40.0% | |
| CCTCAATTGGTCAGTAGAAT+TGG | + | chr5.4:1059204-1059223 | MS.gene40068:CDS | 40.0% | |
| CCTCTTGTAAATGCAAGACA+AGG | + | chr5.4:1060739-1060758 | MS.gene40068:intron | 40.0% | |
| CCTTGTCTTGCATTTACAAG+AGG | - | chr5.4:1060742-1060761 | None:intergenic | 40.0% | |
| CTCAACTGAACCTTTCAACA+CGG | - | chr5.4:1062089-1062108 | None:intergenic | 40.0% | |
| CTGCATAAGTTGTCTTTCCA+AGG | - | chr5.4:1059340-1059359 | None:intergenic | 40.0% | |
| CTTATGCAGTCAATTGAGAC+TGG | + | chr5.4:1059351-1059370 | MS.gene40068:CDS | 40.0% | |
| GACAATTTACATTCCTGGCA+TGG | + | chr5.4:1063656-1063675 | MS.gene40068:intron | 40.0% | |
| GATTCAAATTTGGCACGTGT+AGG | + | chr5.4:1064747-1064766 | MS.gene40068:intron | 40.0% | |
| GATTGAGGAAACTGAGATCA+AGG | + | chr5.4:1059314-1059333 | MS.gene40068:CDS | 40.0% | |
| GCATATTCTCGAACTTGGAA+AGG | + | chr5.4:1061469-1061488 | MS.gene40068:CDS | 40.0% | |
| GCGCAATTAGTTCACAAACA+TGG | + | chr5.4:1064279-1064298 | MS.gene40068:intron | 40.0% | |
| GCTGAATTTGCATACAACCT+GGG | + | chr5.4:1063595-1063614 | MS.gene40068:intron | 40.0% | |
| GGACATATGCAGAATCTACT+AGG | + | chr5.4:1061490-1061509 | MS.gene40068:CDS | 40.0% | |
| GTGTGACACTCATAATAGGA+CGG | + | chr5.4:1062050-1062069 | MS.gene40068:intron | 40.0% | |
| GTGTGCTTGATATTTACCTG+TGG | + | chr5.4:1064396-1064415 | MS.gene40068:intron | 40.0% | |
| GTTAGGAGGTGACTATAGAT+AGG | - | chr5.4:1060482-1060501 | None:intergenic | 40.0% | |
| TACATTCCTGGCATGGATAA+AGG | + | chr5.4:1063663-1063682 | MS.gene40068:intron | 40.0% | |
| TATGAACAATAGGGTGAGAG+AGG | + | chr5.4:1064431-1064450 | MS.gene40068:intron | 40.0% | |
| TATTCTCGCTCAAATGGAGA+TGG | + | chr5.4:1059395-1059414 | MS.gene40068:CDS | 40.0% | |
| TCAGTCGGCAAATAGATTGT+TGG | - | chr5.4:1061693-1061712 | None:intergenic | 40.0% | |
| TGACTCATTACAATGGGTCT+CGG | + | chr5.4:1060382-1060401 | MS.gene40068:intron | 40.0% | |
| TGTAGCTTCTATATGAGGCT+TGG | + | chr5.4:1060558-1060577 | MS.gene40068:intron | 40.0% | |
| TGTAGGCCATGAGTTATTGT+AGG | - | chr5.4:1060768-1060787 | None:intergenic | 40.0% | |
| TTCGATGGCCATTATTTCAG+TGG | - | chr5.4:1063903-1063922 | None:intergenic | 40.0% | |
| TTCTGATTTAGCAGGATTGC+TGG | - | chr5.4:1064363-1064382 | None:intergenic | 40.0% | |
| TTGCTCGTCAGTTAGTAAAC+GGG | - | chr5.4:1060504-1060523 | None:intergenic | 40.0% | |
| ! | GAGGTCACAAGTTTGAGTTA+TGG | + | chr5.4:1060710-1060729 | MS.gene40068:intron | 40.0% |
| !! | ACGGCCCCATTTTGATAAAA+AGG | - | chr5.4:1060902-1060921 | None:intergenic | 40.0% |
| !! | AGTACAATGGCTCTGATTAG+TGG | - | chr5.4:1062856-1062875 | None:intergenic | 40.0% |
| !! | ATCATTACAGAGGTATTGGG+CGG | + | chr5.4:1064851-1064870 | MS.gene40068:CDS | 40.0% |
| !! | ATGGCTGTTCTATCTGGTTT+TGG | + | chr5.4:1059246-1059265 | MS.gene40068:CDS | 40.0% |
| !! | CCTTTCTTGTTTACTGGCTT+TGG | + | chr5.4:1064251-1064270 | MS.gene40068:intron | 40.0% |
| !! | CTTGCTATTCATCGGAATGT+TGG | + | chr5.4:1063382-1063401 | MS.gene40068:CDS | 40.0% |
| !! | GCAACAAAAGGCTTTGAAGT+TGG | + | chr5.4:1060648-1060667 | MS.gene40068:intron | 40.0% |
| !! | GTACAATGGCTCTGATTAGT+GGG | - | chr5.4:1062855-1062874 | None:intergenic | 40.0% |
| !! | GTCAGTAGAATTGGTGTCAT+TGG | + | chr5.4:1059213-1059232 | MS.gene40068:CDS | 40.0% |
| !! | TACAATGGCTCTGATTAGTG+GGG | - | chr5.4:1062854-1062873 | None:intergenic | 40.0% |
| !! | TCTGAACTTGTTTTTCGCAG+AGG | + | chr5.4:1059670-1059689 | MS.gene40068:intron | 40.0% |
| !! | TGTCATTGGTGTTACTGTCA+TGG | + | chr5.4:1059227-1059246 | MS.gene40068:CDS | 40.0% |
| !!! | GAGGCTTGGTTAGTTTTCAT+GGG | + | chr5.4:1060572-1060591 | MS.gene40068:intron | 40.0% |
| !!! | TGAGGCTTGGTTAGTTTTCA+TGG | + | chr5.4:1060571-1060590 | MS.gene40068:intron | 40.0% |
| ACAGATTGCACCCAGAAGTT+TGG | + | chr5.4:1061948-1061967 | MS.gene40068:intron | 45.0% | |
| ACTCAAACTTGTGACCTCCT+AGG | - | chr5.4:1060708-1060727 | None:intergenic | 45.0% | |
| ACTGTCATGGCTGTTCTATC+TGG | + | chr5.4:1059240-1059259 | MS.gene40068:CDS | 45.0% | |
| AGGGTAGCATCTCACAATAG+AGG | - | chr5.4:1063875-1063894 | None:intergenic | 45.0% | |
| ATGGAGATGGAGAACAAGCA+AGG | + | chr5.4:1059408-1059427 | MS.gene40068:CDS | 45.0% | |
| ATTGAGCAGGAAGGGAAGAA+AGG | + | chr5.4:1060065-1060084 | MS.gene40068:intron | 45.0% | |
| CGTGTTGAAAGGTTCAGTTG+AGG | + | chr5.4:1062087-1062106 | MS.gene40068:intron | 45.0% | |
| CTATGAGCTTCGACAAGCAA+AGG | + | chr5.4:1061213-1061232 | MS.gene40068:CDS | 45.0% | |
| CTGCTGCATATTCTCGAACT+TGG | + | chr5.4:1061464-1061483 | MS.gene40068:CDS | 45.0% | |
| GAAACTAACCTTGCTCCTTC+TGG | - | chr5.4:1059758-1059777 | None:intergenic | 45.0% | |
| GAACAAGCAAGGATCTGAAG+AGG | + | chr5.4:1059419-1059438 | MS.gene40068:CDS | 45.0% | |
| GCTTGATATTTACCTGTGGC+CGG | + | chr5.4:1064400-1064419 | MS.gene40068:intron | 45.0% | |
| GGCTGAATTTGCATACAACC+TGG | + | chr5.4:1063594-1063613 | MS.gene40068:intron | 45.0% | |
| GTTCTGCCATTCTGTCAAAG+TGG | - | chr5.4:1063853-1063872 | None:intergenic | 45.0% | |
| TGACACTCATAATAGGACGG+AGG | + | chr5.4:1062053-1062072 | MS.gene40068:intron | 45.0% | |
| TGCTGCTAATATCACCGTAC+AGG | - | chr5.4:1062130-1062149 | None:intergenic | 45.0% | |
| TTACAATGGGTCTCGGTCAA+TGG | + | chr5.4:1060389-1060408 | MS.gene40068:intron | 45.0% | |
| TTGAGCAGGAAGGGAAGAAA+GGG | + | chr5.4:1060066-1060085 | MS.gene40068:intron | 45.0% | |
| TTGGTTGTGATATCAGTGCG+TGG | + | chr5.4:1063401-1063420 | MS.gene40068:CDS | 45.0% | |
| TTGTGCTATCCAGTCATGGT+GGG | - | chr5.4:1060816-1060835 | None:intergenic | 45.0% | |
| ! | AATGGCTCGGAAGCAAAGTA+TGG | + | chr5.4:1061662-1061681 | MS.gene40068:intron | 45.0% |
| ! | CGTCAGTTAGTAAACGGGTT+AGG | - | chr5.4:1060499-1060518 | None:intergenic | 45.0% |
| ! | GCAGTTACTTTCATGTGCCT+AGG | + | chr5.4:1060688-1060707 | MS.gene40068:intron | 45.0% |
| ! | GCTGTTTCAAGAGTTGGAAG+TGG | + | chr5.4:1064059-1064078 | MS.gene40068:CDS | 45.0% |
| ! | GTTACTTTCATGTGCCTAGG+AGG | + | chr5.4:1060691-1060710 | MS.gene40068:intron | 45.0% |
| ! | TATCAAAGGCATGGAAGCAG+AGG | + | chr5.4:1061147-1061166 | MS.gene40068:CDS | 45.0% |
| ! | TCTAAAGCAGGCGCTTCAAA+TGG | - | chr5.4:1059799-1059818 | None:intergenic | 45.0% |
| ! | TTTGCCACTCGGCATGTTTT+TGG | + | chr5.4:1059458-1059477 | MS.gene40068:intron | 45.0% |
| ! | TTTGGAGCTCATACTGTAGC+GGG | - | chr5.4:1060628-1060647 | None:intergenic | 45.0% |
| !! | CAGTTAGTAAACGGGTTAGG+AGG | - | chr5.4:1060496-1060515 | None:intergenic | 45.0% |
| !! | CTTTGGAGCTCATACTGTAG+CGG | - | chr5.4:1060629-1060648 | None:intergenic | 45.0% |
| !! | GCTGGAAAGTTGATGTTCGA+TGG | - | chr5.4:1063918-1063937 | None:intergenic | 45.0% |
| !!! | GTGGACTAGAGCTTTTCGTT+AGG | + | chr5.4:1061635-1061654 | MS.gene40068:intron | 45.0% |
| !!! | TACAAATTTTTTAATTTTTT+TGG | + | chr5.4:1061111-1061130 | MS.gene40068:intron | 5.0% |
| AGCAAACCGAAGCAAGAGTC+TGG | + | chr5.4:1064700-1064719 | MS.gene40068:intron | 50.0% | |
| AGTTGTTCGATCCGTGCAAG+AGG | + | chr5.4:1059731-1059750 | MS.gene40068:CDS | 50.0% | |
| CATATATTGTCTCCGGCCAC+AGG | - | chr5.4:1064415-1064434 | None:intergenic | 50.0% | |
| CTTGTGCTATCCAGTCATGG+TGG | - | chr5.4:1060817-1060836 | None:intergenic | 50.0% | |
| GAAGGGTCGGACATATCTGT+AGG | - | chr5.4:1060785-1060804 | None:intergenic | 50.0% | |
| GAGTCCAAAAACATGCCGAG+TGG | - | chr5.4:1059465-1059484 | None:intergenic | 50.0% | |
| GGAAACTGAGATCAAGGCCT+TGG | + | chr5.4:1059320-1059339 | MS.gene40068:CDS | 50.0% | |
| GTTCAGTTGATCCCGTGACA+AGG | + | chr5.4:1062386-1062405 | MS.gene40068:CDS | 50.0% | |
| TGGATGGCACTTCGAGAGAT+TGG | - | chr5.4:1064211-1064230 | None:intergenic | 50.0% | |
| ! | CATGGTGGGAGTCTAGAGAA+GGG | - | chr5.4:1060802-1060821 | None:intergenic | 50.0% |
| ! | TCATGGTGGGAGTCTAGAGA+AGG | - | chr5.4:1060803-1060822 | None:intergenic | 50.0% |
| !! | AAGGCTTTGAAGTTGGGGTG+TGG | + | chr5.4:1060655-1060674 | MS.gene40068:intron | 50.0% |
| !! | AATGGCTCTGATTAGTGGGG+AGG | - | chr5.4:1062851-1062870 | None:intergenic | 50.0% |
| !! | AGGCTTTGAAGTTGGGGTGT+GGG | + | chr5.4:1060656-1060675 | MS.gene40068:intron | 50.0% |
| !! | CTCATACTGTAGCGGGTCTA+GGG | - | chr5.4:1060621-1060640 | None:intergenic | 50.0% |
| ATCCGTGCAAGAGGACCAGA+AGG | + | chr5.4:1059740-1059759 | MS.gene40068:CDS | 55.0% | |
| CAAGAGGACCAGAAGGAGCA+AGG | + | chr5.4:1059747-1059766 | MS.gene40068:CDS | 55.0% | |
| CTCCTTCTGGTCCTCTTGCA+CGG | - | chr5.4:1059745-1059764 | None:intergenic | 55.0% | |
| CTCTAGACTCCCACCATGAC+TGG | + | chr5.4:1060804-1060823 | MS.gene40068:intron | 55.0% | |
| GTGGGAGTCTAGAGAAGGGT+CGG | - | chr5.4:1060798-1060817 | None:intergenic | 55.0% | |
| ! | AGGCATGGAAGCAGAGGTAC+TGG | + | chr5.4:1061153-1061172 | MS.gene40068:CDS | 55.0% |
| !! | ACTGTAGCGGGTCTAGGGAA+GGG | - | chr5.4:1060616-1060635 | None:intergenic | 55.0% |
| !! | GCTCATACTGTAGCGGGTCT+AGG | - | chr5.4:1060622-1060641 | None:intergenic | 55.0% |
| !! | GGCTTTGAAGTTGGGGTGTG+GGG | + | chr5.4:1060657-1060676 | MS.gene40068:intron | 55.0% |
| !! | TACTGTAGCGGGTCTAGGGA+AGG | - | chr5.4:1060617-1060636 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 1059171 | 1064998 | 1059171 | ID=MS.gene40068 |
| chr5.4 | mRNA | 1059171 | 1064998 | 1059171 | ID=MS.gene40068.t1;Parent=MS.gene40068 |
| chr5.4 | exon | 1059171 | 1059440 | 1059171 | ID=MS.gene40068.t1.exon1;Parent=MS.gene40068.t1 |
| chr5.4 | CDS | 1059171 | 1059440 | 1059171 | ID=cds.MS.gene40068.t1;Parent=MS.gene40068.t1 |
| chr5.4 | exon | 1059690 | 1059768 | 1059690 | ID=MS.gene40068.t1.exon2;Parent=MS.gene40068.t1 |
| chr5.4 | CDS | 1059690 | 1059768 | 1059690 | ID=cds.MS.gene40068.t1;Parent=MS.gene40068.t1 |
| chr5.4 | exon | 1061146 | 1061234 | 1061146 | ID=MS.gene40068.t1.exon3;Parent=MS.gene40068.t1 |
| chr5.4 | CDS | 1061146 | 1061234 | 1061146 | ID=cds.MS.gene40068.t1;Parent=MS.gene40068.t1 |
| chr5.4 | exon | 1061460 | 1061552 | 1061460 | ID=MS.gene40068.t1.exon4;Parent=MS.gene40068.t1 |
| chr5.4 | CDS | 1061460 | 1061552 | 1061460 | ID=cds.MS.gene40068.t1;Parent=MS.gene40068.t1 |
| chr5.4 | exon | 1062238 | 1062264 | 1062238 | ID=MS.gene40068.t1.exon5;Parent=MS.gene40068.t1 |
| chr5.4 | CDS | 1062238 | 1062264 | 1062238 | ID=cds.MS.gene40068.t1;Parent=MS.gene40068.t1 |
| chr5.4 | exon | 1062382 | 1062468 | 1062382 | ID=MS.gene40068.t1.exon6;Parent=MS.gene40068.t1 |
| chr5.4 | CDS | 1062382 | 1062468 | 1062382 | ID=cds.MS.gene40068.t1;Parent=MS.gene40068.t1 |
| chr5.4 | exon | 1063374 | 1063445 | 1063374 | ID=MS.gene40068.t1.exon7;Parent=MS.gene40068.t1 |
| chr5.4 | CDS | 1063374 | 1063445 | 1063374 | ID=cds.MS.gene40068.t1;Parent=MS.gene40068.t1 |
| chr5.4 | exon | 1064050 | 1064180 | 1064050 | ID=MS.gene40068.t1.exon8;Parent=MS.gene40068.t1 |
| chr5.4 | CDS | 1064050 | 1064180 | 1064050 | ID=cds.MS.gene40068.t1;Parent=MS.gene40068.t1 |
| chr5.4 | exon | 1064847 | 1064998 | 1064847 | ID=MS.gene40068.t1.exon9;Parent=MS.gene40068.t1 |
| chr5.4 | CDS | 1064847 | 1064998 | 1064847 | ID=cds.MS.gene40068.t1;Parent=MS.gene40068.t1 |
| Gene Sequence |
| Protein sequence |
