Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065069.t1 | GAU17991.1 | 97.1 | 239 | 7 | 0 | 1 | 239 | 1 | 239 | 9.00E-129 | 469.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065069.t1 | Q9M376 | 88.5 | 191 | 22 | 0 | 1 | 191 | 1 | 191 | 4.0e-93 | 342.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065069.t1 | A0A2Z6LNZ2 | 97.1 | 239 | 7 | 0 | 1 | 239 | 1 | 239 | 6.5e-129 | 469.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene065069 | 0.825846 | 3.75E-54 | -1.69E-46 |
| MS.gene04918 | MS.gene065069 | 0.852081 | 5.83E-61 | -1.69E-46 |
| MS.gene04919 | MS.gene065069 | 0.839916 | 1.19E-57 | -1.69E-46 |
| MS.gene04920 | MS.gene065069 | 0.85693 | 2.30E-62 | -1.69E-46 |
| MS.gene049254 | MS.gene065069 | 0.857076 | 2.09E-62 | -1.69E-46 |
| MS.gene049283 | MS.gene065069 | 0.85789 | 1.20E-62 | -1.69E-46 |
| MS.gene049368 | MS.gene065069 | 0.83698 | 6.81E-57 | -1.69E-46 |
| MS.gene049419 | MS.gene065069 | -0.829376 | 5.33E-55 | -1.69E-46 |
| MS.gene049499 | MS.gene065069 | 0.857267 | 1.83E-62 | -1.69E-46 |
| MS.gene049652 | MS.gene065069 | 0.821232 | 4.51E-53 | -1.69E-46 |
| MS.gene049680 | MS.gene065069 | 0.819247 | 1.28E-52 | -1.69E-46 |
| MS.gene049711 | MS.gene065069 | 0.82819 | 1.03E-54 | -1.69E-46 |
| MS.gene049807 | MS.gene065069 | 0.800575 | 1.35E-48 | -1.69E-46 |
| MS.gene049983 | MS.gene065069 | 0.855019 | 8.35E-62 | -1.69E-46 |
| MS.gene050414 | MS.gene065069 | 0.820793 | 5.68E-53 | -1.69E-46 |
| MS.gene050559 | MS.gene065069 | 0.83841 | 2.92E-57 | -1.69E-46 |
| MS.gene050561 | MS.gene065069 | 0.829708 | 4.43E-55 | -1.69E-46 |
| MS.gene050562 | MS.gene065069 | 0.82637 | 2.82E-54 | -1.69E-46 |
| MS.gene05059 | MS.gene065069 | 0.804182 | 2.44E-49 | -1.69E-46 |
| MS.gene050646 | MS.gene065069 | 0.838096 | 3.52E-57 | -1.69E-46 |
| MS.gene050654 | MS.gene065069 | 0.811566 | 6.57E-51 | -1.69E-46 |
| MS.gene050752 | MS.gene065069 | 0.812751 | 3.62E-51 | -1.69E-46 |
| MS.gene050828 | MS.gene065069 | 0.802749 | 4.84E-49 | -1.69E-46 |
| MS.gene050945 | MS.gene065069 | 0.842854 | 2.01E-58 | -1.69E-46 |
| MS.gene050955 | MS.gene065069 | 0.810449 | 1.15E-50 | -1.69E-46 |
| MS.gene051003 | MS.gene065069 | 0.817992 | 2.47E-52 | -1.69E-46 |
| MS.gene051043 | MS.gene065069 | 0.817066 | 4.00E-52 | -1.69E-46 |
| MS.gene051234 | MS.gene065069 | 0.816813 | 4.56E-52 | -1.69E-46 |
| MS.gene051279 | MS.gene065069 | 0.806506 | 7.96E-50 | -1.69E-46 |
| MS.gene051332 | MS.gene065069 | 0.819384 | 1.19E-52 | -1.69E-46 |
| MS.gene051343 | MS.gene065069 | 0.849714 | 2.71E-60 | -1.69E-46 |
| MS.gene051597 | MS.gene065069 | 0.822094 | 2.85E-53 | -1.69E-46 |
| MS.gene051676 | MS.gene065069 | 0.833081 | 6.55E-56 | -1.69E-46 |
| MS.gene051699 | MS.gene065069 | 0.809707 | 1.66E-50 | -1.69E-46 |
| MS.gene051744 | MS.gene065069 | 0.843783 | 1.13E-58 | -1.69E-46 |
| MS.gene051832 | MS.gene065069 | 0.832626 | 8.49E-56 | -1.69E-46 |
| MS.gene051902 | MS.gene065069 | 0.822914 | 1.84E-53 | -1.69E-46 |
| MS.gene051975 | MS.gene065069 | 0.864287 | 1.36E-64 | -1.69E-46 |
| MS.gene052072 | MS.gene065069 | 0.841121 | 5.76E-58 | -1.69E-46 |
| MS.gene052108 | MS.gene065069 | 0.815597 | 8.52E-52 | -1.69E-46 |
| MS.gene052118 | MS.gene065069 | 0.80899 | 2.36E-50 | -1.69E-46 |
| MS.gene052239 | MS.gene065069 | -0.813413 | 2.59E-51 | -1.69E-46 |
| MS.gene052307 | MS.gene065069 | 0.820798 | 5.67E-53 | -1.69E-46 |
| MS.gene052463 | MS.gene065069 | 0.823846 | 1.11E-53 | -1.69E-46 |
| MS.gene052518 | MS.gene065069 | 0.830011 | 3.73E-55 | -1.69E-46 |
| MS.gene052519 | MS.gene065069 | 0.807024 | 6.19E-50 | -1.69E-46 |
| MS.gene052533 | MS.gene065069 | 0.84687 | 1.65E-59 | -1.69E-46 |
| MS.gene052609 | MS.gene065069 | 0.807857 | 4.12E-50 | -1.69E-46 |
| MS.gene052793 | MS.gene065069 | 0.814904 | 1.21E-51 | -1.69E-46 |
| MS.gene052889 | MS.gene065069 | 0.818033 | 2.42E-52 | -1.69E-46 |
| MS.gene052932 | MS.gene065069 | 0.813142 | 2.97E-51 | -1.69E-46 |
| MS.gene052954 | MS.gene065069 | 0.81801 | 2.45E-52 | -1.69E-46 |
| MS.gene053006 | MS.gene065069 | 0.828099 | 1.08E-54 | -1.69E-46 |
| MS.gene053079 | MS.gene065069 | 0.804044 | 2.61E-49 | -1.69E-46 |
| MS.gene053094 | MS.gene065069 | 0.824364 | 8.40E-54 | -1.69E-46 |
| MS.gene053226 | MS.gene065069 | 0.807518 | 4.86E-50 | -1.69E-46 |
| MS.gene053272 | MS.gene065069 | -0.843484 | 1.36E-58 | -1.69E-46 |
| MS.gene053298 | MS.gene065069 | 0.81331 | 2.73E-51 | -1.69E-46 |
| MS.gene05350 | MS.gene065069 | 0.816734 | 4.75E-52 | -1.69E-46 |
| MS.gene053564 | MS.gene065069 | 0.80781 | 4.21E-50 | -1.69E-46 |
| MS.gene05364 | MS.gene065069 | 0.808144 | 3.58E-50 | -1.69E-46 |
| MS.gene053931 | MS.gene065069 | 0.849695 | 2.74E-60 | -1.69E-46 |
| MS.gene053963 | MS.gene065069 | 0.841766 | 3.89E-58 | -1.69E-46 |
| MS.gene054004 | MS.gene065069 | 0.80302 | 4.26E-49 | -1.69E-46 |
| MS.gene054142 | MS.gene065069 | 0.802391 | 5.74E-49 | -1.69E-46 |
| MS.gene054178 | MS.gene065069 | 0.807937 | 3.96E-50 | -1.69E-46 |
| MS.gene054222 | MS.gene065069 | 0.822477 | 2.32E-53 | -1.69E-46 |
| MS.gene054403 | MS.gene065069 | 0.815031 | 1.14E-51 | -1.69E-46 |
| MS.gene054479 | MS.gene065069 | 0.806507 | 7.95E-50 | -1.69E-46 |
| MS.gene054576 | MS.gene065069 | 0.810166 | 1.32E-50 | -1.69E-46 |
| MS.gene05458 | MS.gene065069 | 0.819293 | 1.25E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene065069 | 0.82943 | 5.17E-55 | -1.69E-46 |
| MS.gene05469 | MS.gene065069 | 0.817122 | 3.88E-52 | -1.69E-46 |
| MS.gene054709 | MS.gene065069 | 0.809328 | 2.00E-50 | -1.69E-46 |
| MS.gene054892 | MS.gene065069 | 0.854447 | 1.22E-61 | -1.69E-46 |
| MS.gene054893 | MS.gene065069 | 0.859354 | 4.38E-63 | -1.69E-46 |
| MS.gene054957 | MS.gene065069 | 0.824594 | 7.42E-54 | -1.69E-46 |
| MS.gene055150 | MS.gene065069 | 0.849619 | 2.88E-60 | -1.69E-46 |
| MS.gene05517 | MS.gene065069 | 0.802073 | 6.67E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene065069 | 0.835297 | 1.82E-56 | -1.69E-46 |
| MS.gene055586 | MS.gene065069 | 0.815642 | 8.33E-52 | -1.69E-46 |
| MS.gene055724 | MS.gene065069 | 0.83413 | 3.58E-56 | -1.69E-46 |
| MS.gene055841 | MS.gene065069 | 0.845218 | 4.66E-59 | -1.69E-46 |
| MS.gene056045 | MS.gene065069 | 0.800144 | 1.65E-48 | -1.69E-46 |
| MS.gene056082 | MS.gene065069 | 0.814237 | 1.71E-51 | -1.69E-46 |
| MS.gene056174 | MS.gene065069 | 0.802727 | 4.89E-49 | -1.69E-46 |
| MS.gene056181 | MS.gene065069 | 0.804738 | 1.87E-49 | -1.69E-46 |
| MS.gene056677 | MS.gene065069 | 0.807993 | 3.85E-50 | -1.69E-46 |
| MS.gene056699 | MS.gene065069 | 0.875359 | 3.28E-68 | -1.69E-46 |
| MS.gene056776 | MS.gene065069 | 0.814776 | 1.30E-51 | -1.69E-46 |
| MS.gene05686 | MS.gene065069 | 0.865227 | 6.88E-65 | -1.69E-46 |
| MS.gene05690 | MS.gene065069 | 0.814962 | 1.18E-51 | -1.69E-46 |
| MS.gene056973 | MS.gene065069 | 0.820842 | 5.54E-53 | -1.69E-46 |
| MS.gene056986 | MS.gene065069 | 0.850436 | 1.70E-60 | -1.69E-46 |
| MS.gene057034 | MS.gene065069 | 0.817524 | 3.15E-52 | -1.69E-46 |
| MS.gene057102 | MS.gene065069 | 0.873174 | 1.80E-67 | -1.69E-46 |
| MS.gene057155 | MS.gene065069 | 0.816801 | 4.59E-52 | -1.69E-46 |
| MS.gene057208 | MS.gene065069 | 0.890478 | 9.50E-74 | -1.69E-46 |
| MS.gene057371 | MS.gene065069 | 0.80403 | 2.63E-49 | -1.69E-46 |
| MS.gene057611 | MS.gene065069 | 0.803241 | 3.83E-49 | -1.69E-46 |
| MS.gene057622 | MS.gene065069 | 0.814966 | 1.18E-51 | -1.69E-46 |
| MS.gene057890 | MS.gene065069 | -0.803513 | 3.36E-49 | -1.69E-46 |
| MS.gene058008 | MS.gene065069 | 0.841389 | 4.89E-58 | -1.69E-46 |
| MS.gene058009 | MS.gene065069 | 0.822621 | 2.15E-53 | -1.69E-46 |
| MS.gene058159 | MS.gene065069 | 0.831893 | 1.29E-55 | -1.69E-46 |
| MS.gene058279 | MS.gene065069 | 0.815281 | 1.00E-51 | -1.69E-46 |
| MS.gene058355 | MS.gene065069 | 0.804369 | 2.23E-49 | -1.69E-46 |
| MS.gene058592 | MS.gene065069 | 0.836019 | 1.20E-56 | -1.69E-46 |
| MS.gene058781 | MS.gene065069 | 0.844453 | 7.49E-59 | -1.69E-46 |
| MS.gene058783 | MS.gene065069 | 0.834937 | 2.25E-56 | -1.69E-46 |
| MS.gene05878 | MS.gene065069 | 0.82272 | 2.04E-53 | -1.69E-46 |
| MS.gene05897 | MS.gene065069 | 0.813661 | 2.29E-51 | -1.69E-46 |
| MS.gene059146 | MS.gene065069 | 0.848262 | 6.86E-60 | -1.69E-46 |
| MS.gene059170 | MS.gene065069 | 0.82366 | 1.23E-53 | -1.69E-46 |
| MS.gene05952 | MS.gene065069 | 0.847921 | 8.51E-60 | -1.69E-46 |
| MS.gene059774 | MS.gene065069 | 0.81024 | 1.27E-50 | -1.69E-46 |
| MS.gene05985 | MS.gene065069 | -0.896534 | 3.36E-76 | -1.69E-46 |
| MS.gene059901 | MS.gene065069 | -0.805156 | 1.53E-49 | -1.69E-46 |
| MS.gene059965 | MS.gene065069 | 0.818094 | 2.35E-52 | -1.69E-46 |
| MS.gene06011 | MS.gene065069 | 0.802539 | 5.35E-49 | -1.69E-46 |
| MS.gene060244 | MS.gene065069 | 0.840458 | 8.59E-58 | -1.69E-46 |
| MS.gene060259 | MS.gene065069 | 0.836133 | 1.12E-56 | -1.69E-46 |
| MS.gene060338 | MS.gene065069 | 0.802215 | 6.24E-49 | -1.69E-46 |
| MS.gene060365 | MS.gene065069 | 0.833034 | 6.72E-56 | -1.69E-46 |
| MS.gene060527 | MS.gene065069 | 0.809609 | 1.74E-50 | -1.69E-46 |
| MS.gene060697 | MS.gene065069 | 0.806707 | 7.22E-50 | -1.69E-46 |
| MS.gene060777 | MS.gene065069 | 0.805128 | 1.55E-49 | -1.69E-46 |
| MS.gene060840 | MS.gene065069 | 0.81187 | 5.64E-51 | -1.69E-46 |
| MS.gene060932 | MS.gene065069 | 0.812557 | 3.99E-51 | -1.69E-46 |
| MS.gene060933 | MS.gene065069 | 0.859429 | 4.16E-63 | -1.69E-46 |
| MS.gene060935 | MS.gene065069 | 0.894903 | 1.59E-75 | -1.69E-46 |
| MS.gene060937 | MS.gene065069 | 0.899874 | 1.29E-77 | -1.69E-46 |
| MS.gene061100 | MS.gene065069 | 0.8367 | 8.02E-57 | -1.69E-46 |
| MS.gene061160 | MS.gene065069 | 0.81585 | 7.48E-52 | -1.69E-46 |
| MS.gene061188 | MS.gene065069 | 0.8594 | 4.25E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065069.t1 | MTR_1g111890 | 99.476 | 191 | 1 | 0 | 1 | 191 | 1 | 191 | 1.16e-140 | 394 |
| MS.gene065069.t1 | MTR_4g022570 | 58.115 | 191 | 61 | 1 | 1 | 191 | 1 | 172 | 1.10e-81 | 244 |
| MS.gene065069.t1 | MTR_4g083490 | 57.895 | 190 | 61 | 2 | 2 | 191 | 4 | 174 | 7.13e-80 | 239 |
| MS.gene065069.t1 | MTR_2g028790 | 58.421 | 190 | 60 | 2 | 2 | 191 | 6 | 176 | 9.90e-79 | 236 |
| MS.gene065069.t1 | MTR_1g047720 | 57.592 | 191 | 62 | 2 | 1 | 191 | 1 | 172 | 1.47e-78 | 236 |
| MS.gene065069.t1 | MTR_7g058900 | 55.446 | 202 | 69 | 2 | 1 | 201 | 1 | 182 | 7.70e-78 | 234 |
| MS.gene065069.t1 | MTR_2g436870 | 50.785 | 191 | 75 | 1 | 1 | 191 | 1 | 172 | 1.12e-66 | 206 |
| MS.gene065069.t1 | MTR_7g058640 | 48.293 | 205 | 83 | 3 | 1 | 201 | 1 | 186 | 4.80e-66 | 204 |
| MS.gene065069.t1 | MTR_7g058640 | 49.479 | 192 | 78 | 2 | 1 | 192 | 1 | 173 | 1.58e-65 | 202 |
| MS.gene065069.t1 | MTR_1g047710 | 51.969 | 127 | 42 | 1 | 65 | 191 | 13 | 120 | 2.55e-41 | 138 |
| MS.gene065069.t1 | MTR_4g022470 | 51.200 | 125 | 42 | 1 | 65 | 189 | 11 | 116 | 7.94e-41 | 136 |
| MS.gene065069.t1 | MTR_5g089370 | 37.634 | 186 | 94 | 3 | 5 | 189 | 2 | 166 | 1.20e-37 | 131 |
| MS.gene065069.t1 | MTR_4g052550 | 34.409 | 186 | 100 | 4 | 5 | 189 | 2 | 166 | 1.50e-33 | 120 |
| MS.gene065069.t1 | MTR_4g115390 | 34.392 | 189 | 98 | 3 | 5 | 188 | 2 | 169 | 3.97e-31 | 114 |
| MS.gene065069.t1 | MTR_7g058640 | 42.520 | 127 | 50 | 3 | 79 | 201 | 1 | 108 | 5.67e-28 | 103 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065069.t1 | AT3G54300 | 88.482 | 191 | 22 | 0 | 1 | 191 | 1 | 191 | 8.86e-120 | 341 |
| MS.gene065069.t1 | AT3G54300 | 88.482 | 191 | 22 | 0 | 1 | 191 | 1 | 191 | 8.86e-120 | 341 |
| MS.gene065069.t1 | AT3G54300 | 88.482 | 191 | 22 | 0 | 1 | 191 | 1 | 191 | 8.86e-120 | 341 |
| MS.gene065069.t1 | AT1G04760 | 60.209 | 191 | 57 | 1 | 1 | 191 | 1 | 172 | 5.99e-82 | 244 |
| MS.gene065069.t1 | AT1G04760 | 60.209 | 191 | 57 | 1 | 1 | 191 | 1 | 172 | 5.99e-82 | 244 |
| MS.gene065069.t1 | AT2G32670 | 59.162 | 191 | 59 | 1 | 1 | 191 | 66 | 237 | 1.32e-80 | 243 |
| MS.gene065069.t1 | AT2G33120 | 59.162 | 191 | 59 | 2 | 1 | 191 | 1 | 172 | 2.62e-79 | 238 |
| MS.gene065069.t1 | AT1G04750 | 58.639 | 191 | 60 | 2 | 1 | 191 | 1 | 172 | 1.95e-78 | 235 |
| MS.gene065069.t1 | AT2G33120 | 56.784 | 199 | 59 | 3 | 1 | 191 | 1 | 180 | 3.79e-76 | 230 |
| MS.gene065069.t1 | AT4G15780 | 49.231 | 195 | 79 | 2 | 1 | 194 | 1 | 176 | 1.06e-65 | 202 |
| MS.gene065069.t1 | AT2G33110 | 51.381 | 181 | 69 | 2 | 1 | 181 | 1 | 162 | 6.06e-62 | 192 |
| MS.gene065069.t1 | AT2G33110 | 51.381 | 181 | 69 | 2 | 1 | 181 | 1 | 162 | 1.82e-61 | 192 |
| MS.gene065069.t1 | AT1G04750 | 58.559 | 111 | 27 | 2 | 81 | 191 | 3 | 94 | 7.73e-37 | 127 |
| MS.gene065069.t1 | AT1G04750 | 58.559 | 111 | 27 | 2 | 81 | 191 | 3 | 94 | 7.73e-37 | 127 |
| MS.gene065069.t1 | AT1G04750 | 58.559 | 111 | 27 | 2 | 81 | 191 | 3 | 94 | 7.73e-37 | 127 |
| MS.gene065069.t1 | AT4G32150 | 36.559 | 186 | 96 | 3 | 5 | 189 | 2 | 166 | 2.59e-36 | 128 |
| MS.gene065069.t1 | AT5G11150 | 36.364 | 187 | 96 | 3 | 5 | 189 | 2 | 167 | 2.79e-36 | 128 |
| MS.gene065069.t1 | AT5G11150 | 36.364 | 187 | 96 | 3 | 5 | 189 | 2 | 167 | 4.94e-36 | 127 |
| MS.gene065069.t1 | AT2G25340 | 36.757 | 185 | 95 | 3 | 6 | 189 | 3 | 166 | 3.89e-34 | 122 |
| MS.gene065069.t1 | AT5G22360 | 32.620 | 187 | 103 | 3 | 5 | 189 | 2 | 167 | 2.22e-31 | 115 |
| MS.gene065069.t1 | AT3G24890 | 54.412 | 68 | 26 | 2 | 133 | 197 | 15 | 80 | 4.40e-15 | 70.1 |
| MS.gene065069.t1 | AT2G33120 | 82.051 | 39 | 7 | 0 | 153 | 191 | 52 | 90 | 8.03e-15 | 69.7 |
| MS.gene065069.t1 | AT3G24890 | 67.442 | 43 | 14 | 0 | 141 | 183 | 23 | 65 | 1.75e-14 | 67.0 |
| MS.gene065069.t1 | AT3G24890 | 67.442 | 43 | 14 | 0 | 141 | 183 | 23 | 65 | 1.75e-14 | 67.0 |
| MS.gene065069.t1 | AT3G24890 | 67.442 | 43 | 14 | 0 | 141 | 183 | 23 | 65 | 1.75e-14 | 67.0 |
| MS.gene065069.t1 | AT3G24890 | 67.442 | 43 | 14 | 0 | 141 | 183 | 23 | 65 | 1.75e-14 | 67.0 |
Find 59 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACAATCTTGATAGAGAATT+TGG | 0.088044 | 1.2:+82838210 | MS.gene065069:CDS |
| TTATCTTAGTTATAATATTA+TGG | 0.161768 | 1.2:+82840724 | MS.gene065069:CDS |
| TGGGGAGAAGATTGAACTTT+TGG | 0.275778 | 1.2:+82840496 | MS.gene065069:CDS |
| ATCACAAGAATAAGTGTATT+TGG | 0.280428 | 1.2:-82837600 | None:intergenic |
| TATCTTAGTTATAATATTAT+GGG | 0.315233 | 1.2:+82840725 | MS.gene065069:CDS |
| GATAGTTTACTCATTTCTTC+AGG | 0.318737 | 1.2:-82838355 | None:intergenic |
| CTCCCACCATCAGCTTCATT+TGG | 0.335673 | 1.2:-82840692 | None:intergenic |
| GTTATGCAGGCCAAGTCTTA+AGG | 0.350766 | 1.2:+82838306 | MS.gene065069:intron |
| TGCTAAAACAACAGTTCCTT+TGG | 0.361705 | 1.2:-82837504 | None:intergenic |
| AACGGAAAACTTGCAGTTCC+AGG | 0.368337 | 1.2:+82840526 | MS.gene065069:CDS |
| GCAGAACATACTCAATATAC+TGG | 0.382797 | 1.2:+82837524 | MS.gene065069:CDS |
| TTAGCTGCCTGCCCTGCCTC+TGG | 0.383925 | 1.2:-82840644 | None:intergenic |
| GGCTGACAGCTTCCAGAGGC+AGG | 0.400419 | 1.2:+82840632 | MS.gene065069:intron |
| ACAATCTTGATAGAGAATTT+GGG | 0.414431 | 1.2:+82838211 | MS.gene065069:CDS |
| TTCAATTTCCTCTTAGACAA+TGG | 0.420582 | 1.2:+82837632 | MS.gene065069:CDS |
| TATTATGGGTTATTGCTTGT+GGG | 0.421870 | 1.2:+82840739 | MS.gene065069:CDS |
| ACAGCTTCCAGAGGCAGGGC+AGG | 0.424399 | 1.2:+82840637 | MS.gene065069:intron |
| GATGACTTTAACCAGCGTTA+TGG | 0.433674 | 1.2:+82838102 | MS.gene065069:CDS |
| TTATGCAGGCCAAGTCTTAA+GGG | 0.435187 | 1.2:+82838307 | MS.gene065069:intron |
| GGCAGGGCAGGCAGCTAAGA+AGG | 0.436079 | 1.2:+82840649 | MS.gene065069:CDS |
| TACCGAATCCATTGTCTAAG+AGG | 0.440698 | 1.2:-82837640 | None:intergenic |
| TTCCTCTTAGACAATGGATT+CGG | 0.441125 | 1.2:+82837638 | MS.gene065069:CDS |
| GAGTAAACTATCAAAGTTGA+AGG | 0.456658 | 1.2:+82838366 | MS.gene065069:CDS |
| GTGTATTTGGTGCTATTTGA+AGG | 0.464053 | 1.2:-82837587 | None:intergenic |
| GTTGTTGCTGATGAATCAAT+TGG | 0.466016 | 1.2:+82838042 | MS.gene065069:CDS |
| ATTATGGGTTATTGCTTGTG+GGG | 0.475053 | 1.2:+82840740 | MS.gene065069:CDS |
| GTTTACTCATTTCTTCAGGA+TGG | 0.480252 | 1.2:-82838351 | None:intergenic |
| ATATTATGGGTTATTGCTTG+TGG | 0.493605 | 1.2:+82840738 | MS.gene065069:CDS |
| GGCTCAAATAACTGAGGTCA+AGG | 0.502250 | 1.2:+82838387 | MS.gene065069:CDS |
| TTTACTCATTTCTTCAGGAT+GGG | 0.513008 | 1.2:-82838350 | None:intergenic |
| TTATGGGTTATTGCTTGTGG+GGG | 0.536160 | 1.2:+82840741 | MS.gene065069:CDS |
| ATTGTCTAAGAGGAAATTGA+AGG | 0.538133 | 1.2:-82837630 | None:intergenic |
| AAATACACTTATTCTTGTGA+TGG | 0.544278 | 1.2:+82837602 | MS.gene065069:CDS |
| CTCAAATAACTGAGGTCAAG+GGG | 0.547294 | 1.2:+82838389 | MS.gene065069:CDS |
| ATATATAGCTTTGTTGCCAA+AGG | 0.547808 | 1.2:+82837488 | MS.gene065069:CDS |
| TGCATATGCCCCTTAAGACT+TGG | 0.551661 | 1.2:-82838316 | None:intergenic |
| ATGAAGCTGATGGTGGGAGG+AGG | 0.554494 | 1.2:+82840696 | MS.gene065069:CDS |
| TGAGGTCAAGGGGATAATGA+TGG | 0.556128 | 1.2:+82838399 | MS.gene065069:CDS |
| ATAATATTATAACTAAGATA+AGG | 0.566690 | 1.2:-82840722 | None:intergenic |
| CATCATCATCAGCAAGTGGA+TGG | 0.582788 | 1.2:-82838149 | None:intergenic |
| TCCTCATCATCATCAGCAAG+TGG | 0.587787 | 1.2:-82838153 | None:intergenic |
| ATTCAAGCATTGAACAGCAA+TGG | 0.590197 | 1.2:-82837558 | None:intergenic |
| GCTCAAATAACTGAGGTCAA+GGG | 0.590488 | 1.2:+82838388 | MS.gene065069:CDS |
| CTCCAAATGAAGCTGATGGT+GGG | 0.596961 | 1.2:+82840690 | MS.gene065069:CDS |
| AATGATGGATAATATTGAGA+AGG | 0.603558 | 1.2:+82838414 | MS.gene065069:CDS |
| TCTCCAAATGAAGCTGATGG+TGG | 0.603558 | 1.2:+82840689 | MS.gene065069:CDS |
| TAATACTAGCACCATAACGC+TGG | 0.607184 | 1.2:-82838113 | None:intergenic |
| GCTGACAGCTTCCAGAGGCA+GGG | 0.612920 | 1.2:+82840633 | MS.gene065069:intron |
| TATGCAGGCCAAGTCTTAAG+GGG | 0.622221 | 1.2:+82838308 | MS.gene065069:intron |
| GGCAGCTAAGAAGGAAGATG+TGG | 0.627425 | 1.2:+82840658 | MS.gene065069:CDS |
| TTTGAAGGTGTTGGATCGTG+GGG | 0.629493 | 1.2:+82840478 | MS.gene065069:intron |
| TTGCTGATGAATCAATTGGA+AGG | 0.631302 | 1.2:+82838046 | MS.gene065069:CDS |
| TTGATTCATCAGCAACAACA+AGG | 0.631330 | 1.2:-82838038 | None:intergenic |
| TTTGTGAGAATGAGTCAAAG+GGG | 0.636577 | 1.2:+82837461 | None:intergenic |
| CAAATGAAGCTGATGGTGGG+AGG | 0.647708 | 1.2:+82840693 | MS.gene065069:CDS |
| GAATCTCCAAATGAAGCTGA+TGG | 0.655894 | 1.2:+82840686 | MS.gene065069:CDS |
| TCCACTTGCTGATGATGATG+AGG | 0.664896 | 1.2:+82838152 | MS.gene065069:CDS |
| TTTAGGCTGACAGCTTCCAG+AGG | 0.685949 | 1.2:+82840628 | MS.gene065069:intron |
| GTTGAAGGCTCAAATAACTG+AGG | 0.694430 | 1.2:+82838381 | MS.gene065069:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATATTATAACTAAGATA+AGG | - | chr1.2:82840725-82840744 | None:intergenic | 10.0% |
| !! | TATCTTAGTTATAATATTAT+GGG | + | chr1.2:82840725-82840744 | MS.gene065069:CDS | 10.0% |
| !! | TTATCTTAGTTATAATATTA+TGG | + | chr1.2:82840724-82840743 | MS.gene065069:CDS | 10.0% |
| !! | ATTTATTTGCGTTAAAATTT+AGG | + | chr1.2:82840611-82840630 | MS.gene065069:intron | 15.0% |
| !! | CTGAAGAATATAATTATATA+AGG | - | chr1.2:82839171-82839190 | None:intergenic | 15.0% |
| !! | TGAAACATAAATCATATATA+CGG | - | chr1.2:82840354-82840373 | None:intergenic | 15.0% |
| !!! | AAAAATGATTTAGGTTTAAA+TGG | + | chr1.2:82838975-82838994 | MS.gene065069:intron | 15.0% |
| !!! | AATTTTTCTTTTGGTTAAAT+TGG | + | chr1.2:82840221-82840240 | MS.gene065069:intron | 15.0% |
| !!! | ATATTTTATGAGTAATCAAA+AGG | - | chr1.2:82840139-82840158 | None:intergenic | 15.0% |
| !!! | ATTTTTCTTTTGGTTAAATT+GGG | + | chr1.2:82840222-82840241 | MS.gene065069:intron | 15.0% |
| !!! | TATAGTAAGTTTTTTTTGTT+TGG | + | chr1.2:82837746-82837765 | MS.gene065069:intron | 15.0% |
| !!! | TTAAACCTAAATCATTTTTA+CGG | - | chr1.2:82838974-82838993 | None:intergenic | 15.0% |
| !!! | TTAACTGATAATTTTTCTTT+TGG | + | chr1.2:82840212-82840231 | MS.gene065069:intron | 15.0% |
| !!! | TTATAACGATTTGTTTTTTT+TGG | - | chr1.2:82837918-82837937 | None:intergenic | 15.0% |
| !! | ATGTTGTTAAATATAAGAGA+AGG | - | chr1.2:82839999-82840018 | None:intergenic | 20.0% |
| !! | ATTCTAATTTAAGTATCCAA+CGG | - | chr1.2:82840269-82840288 | None:intergenic | 20.0% |
| !! | ATTGTCTTTATCTTTATAAC+AGG | + | chr1.2:82839972-82839991 | MS.gene065069:intron | 20.0% |
| !! | TAAAACCTTCCAAAAAAAAT+TGG | - | chr1.2:82839694-82839713 | None:intergenic | 20.0% |
| !! | TAGCTAATAAAAATTGACAT+GGG | + | chr1.2:82839778-82839797 | MS.gene065069:intron | 20.0% |
| !!! | ATATACTATACTTTTTATGC+CGG | + | chr1.2:82840287-82840306 | MS.gene065069:intron | 20.0% |
| !!! | TTACTATTCTAGTTTTCTTT+AGG | + | chr1.2:82839213-82839232 | MS.gene065069:intron | 20.0% |
| ! | AAATACACTTATTCTTGTGA+TGG | + | chr1.2:82837602-82837621 | MS.gene065069:CDS | 25.0% |
| ! | ACAATCTTGATAGAGAATTT+GGG | + | chr1.2:82838211-82838230 | MS.gene065069:CDS | 25.0% |
| ! | AGATTGTCTTAATAATCATC+CGG | - | chr1.2:82840309-82840328 | None:intergenic | 25.0% |
| ! | AGGAGAATATATTAGATAGA+AGG | + | chr1.2:82838893-82838912 | MS.gene065069:intron | 25.0% |
| ! | ATCACAAGAATAAGTGTATT+TGG | - | chr1.2:82837603-82837622 | None:intergenic | 25.0% |
| ! | ATCCCTTGTATATCATTTAA+AGG | - | chr1.2:82838576-82838595 | None:intergenic | 25.0% |
| ! | CTAGCTAATAAAAATTGACA+TGG | + | chr1.2:82839777-82839796 | MS.gene065069:intron | 25.0% |
| ! | TAAAAAACGCTATAATTGCA+AGG | - | chr1.2:82837719-82837738 | None:intergenic | 25.0% |
| ! | TACAATCTTGATAGAGAATT+TGG | + | chr1.2:82838210-82838229 | MS.gene065069:CDS | 25.0% |
| ! | TGCCTTTAAATGATATACAA+GGG | + | chr1.2:82838571-82838590 | MS.gene065069:intron | 25.0% |
| ! | TTCTAATTTAAGTATCCAAC+GGG | - | chr1.2:82840268-82840287 | None:intergenic | 25.0% |
| ! | TTGCCTTTAAATGATATACA+AGG | + | chr1.2:82838570-82838589 | MS.gene065069:intron | 25.0% |
| ! | TTTGGATAATAGTTAATACC+TGG | - | chr1.2:82840547-82840566 | None:intergenic | 25.0% |
| !! | CATTTCAACTTTTGATGTTT+AGG | + | chr1.2:82839826-82839845 | MS.gene065069:intron | 25.0% |
| !! | GTATACTTTAGCTTAAAATC+AGG | + | chr1.2:82838833-82838852 | MS.gene065069:intron | 25.0% |
| !! | TTATATGCATGCATTTTCTA+AGG | + | chr1.2:82839288-82839307 | MS.gene065069:intron | 25.0% |
| !!! | AATGATGGATAATATTGAGA+AGG | + | chr1.2:82838414-82838433 | MS.gene065069:CDS | 25.0% |
| !!! | GAGAAATCTTTCACTTTTTT+TGG | + | chr1.2:82839374-82839393 | MS.gene065069:intron | 25.0% |
| !!! | TAATTGGAGCCAATTTTTTT+TGG | + | chr1.2:82839682-82839701 | MS.gene065069:intron | 25.0% |
| !!! | TGTATTTTGATTATGCTTTC+TGG | + | chr1.2:82838631-82838650 | MS.gene065069:intron | 25.0% |
| !!! | TTATGTTTCAGTTTTAAACC+AGG | + | chr1.2:82840364-82840383 | MS.gene065069:intron | 25.0% |
| AAAAAATAGAGGACTTTGAG+AGG | - | chr1.2:82839576-82839595 | None:intergenic | 30.0% | |
| AAGATAGGCCAAAAATTTAC+AGG | + | chr1.2:82838935-82838954 | MS.gene065069:intron | 30.0% | |
| AAGCAAATCTTATAAAGCCA+TGG | - | chr1.2:82840059-82840078 | None:intergenic | 30.0% | |
| AATTTGAAGGAACTCGTATA+GGG | - | chr1.2:82839506-82839525 | None:intergenic | 30.0% | |
| ACAATTTCAAACATAGCTAG+AGG | - | chr1.2:82839957-82839976 | None:intergenic | 30.0% | |
| ACCTAGTTTGGAAAAAACTT+TGG | + | chr1.2:82838749-82838768 | MS.gene065069:intron | 30.0% | |
| AGAGAATCCTTCTAATTTGA+AGG | - | chr1.2:82839519-82839538 | None:intergenic | 30.0% | |
| ATATTAGATAGAAGGTAGTC+TGG | + | chr1.2:82838901-82838920 | MS.gene065069:intron | 30.0% | |
| ATTGTCTAAGAGGAAATTGA+AGG | - | chr1.2:82837633-82837652 | None:intergenic | 30.0% | |
| CCAAACCGTAAAAATGATTT+AGG | + | chr1.2:82838966-82838985 | MS.gene065069:intron | 30.0% | |
| CGATAAACAATGACATCATT+TGG | + | chr1.2:82838709-82838728 | MS.gene065069:intron | 30.0% | |
| GAGTAAACTATCAAAGTTGA+AGG | + | chr1.2:82838366-82838385 | MS.gene065069:CDS | 30.0% | |
| GATAGTTTACTCATTTCTTC+AGG | - | chr1.2:82838358-82838377 | None:intergenic | 30.0% | |
| GTGCTTTATATTCAGAAACA+TGG | - | chr1.2:82840432-82840451 | None:intergenic | 30.0% | |
| TAATTTGAAGGAACTCGTAT+AGG | - | chr1.2:82839507-82839526 | None:intergenic | 30.0% | |
| TAGTTTGGAAAAAACTTTGG+TGG | + | chr1.2:82838752-82838771 | MS.gene065069:intron | 30.0% | |
| TCATTTCAAGAAGTTACGAA+AGG | + | chr1.2:82839135-82839154 | MS.gene065069:intron | 30.0% | |
| TGGTTATGATATTCTTACCT+GGG | + | chr1.2:82838772-82838791 | MS.gene065069:intron | 30.0% | |
| TTATCAGTTAAAACCTCTGT+TGG | - | chr1.2:82840203-82840222 | None:intergenic | 30.0% | |
| TTCAATTTCCTCTTAGACAA+TGG | + | chr1.2:82837632-82837651 | MS.gene065069:CDS | 30.0% | |
| TTTACTCATTTCTTCAGGAT+GGG | - | chr1.2:82838353-82838372 | None:intergenic | 30.0% | |
| ! | AAAAATAGAGGACTTTGAGA+GGG | - | chr1.2:82839575-82839594 | None:intergenic | 30.0% |
| ! | AAATGTTTTCTTCTGATTCC+TGG | - | chr1.2:82840385-82840404 | None:intergenic | 30.0% |
| ! | ATATAGAAGCTTTTCCCATT+AGG | - | chr1.2:82839060-82839079 | None:intergenic | 30.0% |
| ! | ATATTATGGGTTATTGCTTG+TGG | + | chr1.2:82840738-82840757 | MS.gene065069:CDS | 30.0% |
| ! | TATTATGGGTTATTGCTTGT+GGG | + | chr1.2:82840739-82840758 | MS.gene065069:CDS | 30.0% |
| !! | AAGAGTGTTTAGATGTGTAT+TGG | + | chr1.2:82838665-82838684 | MS.gene065069:intron | 30.0% |
| !! | ATATATAGCTTTGTTGCCAA+AGG | + | chr1.2:82837488-82837507 | MS.gene065069:CDS | 30.0% |
| !! | ATGGCTTTATAAGATTTGCT+TGG | + | chr1.2:82840058-82840077 | MS.gene065069:intron | 30.0% |
| !! | CCTAAATCATTTTTACGGTT+TGG | - | chr1.2:82838969-82838988 | None:intergenic | 30.0% |
| !! | TGAACTTTTGGTGGATAAAA+CGG | + | chr1.2:82840508-82840527 | MS.gene065069:CDS | 30.0% |
| !! | TGGCTTTATAAGATTTGCTT+GGG | + | chr1.2:82840059-82840078 | MS.gene065069:intron | 30.0% |
| !! | TTTTGATTATGCTTTCTGGT+TGG | + | chr1.2:82838635-82838654 | MS.gene065069:intron | 30.0% |
| !!! | AAAGTTTTTTCCAAACTAGG+TGG | - | chr1.2:82838750-82838769 | None:intergenic | 30.0% |
| !!! | ACCAAAGTTTTTTCCAAACT+AGG | - | chr1.2:82838753-82838772 | None:intergenic | 30.0% |
| !!! | CATTTTCTAAGGCATTGTTT+GGG | + | chr1.2:82839299-82839318 | MS.gene065069:intron | 30.0% |
| !!! | TTCCTTTTGTGTTTTTGGAA+CGG | + | chr1.2:82838073-82838092 | MS.gene065069:CDS | 30.0% |
| ACGAGTTCCTTCAAATTAGA+AGG | + | chr1.2:82839509-82839528 | MS.gene065069:intron | 35.0% | |
| AGACGGAACTTTCTGTTAAT+TGG | + | chr1.2:82839666-82839685 | MS.gene065069:intron | 35.0% | |
| AGTTCGGAAATGTTTGGATT+TGG | - | chr1.2:82840565-82840584 | None:intergenic | 35.0% | |
| ATATCACTGGATCAACATGT+AGG | + | chr1.2:82839876-82839895 | MS.gene065069:intron | 35.0% | |
| ATTTGAAGGAACTCGTATAG+GGG | - | chr1.2:82839505-82839524 | None:intergenic | 35.0% | |
| CAACAGTCTTCAAATTTGCA+GGG | - | chr1.2:82837779-82837798 | None:intergenic | 35.0% | |
| CAGTAGATTGTTTCAGAGTT+CGG | - | chr1.2:82840581-82840600 | None:intergenic | 35.0% | |
| CTTATGATACTCTATCGTCT+TGG | - | chr1.2:82838875-82838894 | None:intergenic | 35.0% | |
| GCAGAACATACTCAATATAC+TGG | + | chr1.2:82837524-82837543 | MS.gene065069:CDS | 35.0% | |
| GGTTAGTGACATGAATCAAA+TGG | - | chr1.2:82839034-82839053 | None:intergenic | 35.0% | |
| GGTTATGATATTCTTACCTG+GGG | + | chr1.2:82838773-82838792 | MS.gene065069:intron | 35.0% | |
| GTCACATGGCATGATTATAT+GGG | - | chr1.2:82837828-82837847 | None:intergenic | 35.0% | |
| GTGGTTATGATATTCTTACC+TGG | + | chr1.2:82838771-82838790 | MS.gene065069:intron | 35.0% | |
| GTTATGATATTCTTACCTGG+GGG | + | chr1.2:82838774-82838793 | MS.gene065069:intron | 35.0% | |
| GTTGTTGCTGATGAATCAAT+TGG | + | chr1.2:82838042-82838061 | MS.gene065069:CDS | 35.0% | |
| GTTTACTCATTTCTTCAGGA+TGG | - | chr1.2:82838354-82838373 | None:intergenic | 35.0% | |
| TCACATGGCATGATTATATG+GGG | - | chr1.2:82837827-82837846 | None:intergenic | 35.0% | |
| TCTTGATAGAGAATTTGGGT+TGG | + | chr1.2:82838215-82838234 | MS.gene065069:intron | 35.0% | |
| TGCTAAAACAACAGTTCCTT+TGG | - | chr1.2:82837507-82837526 | None:intergenic | 35.0% | |
| TTAAATTGGGATACTGCAGA+GGG | + | chr1.2:82840235-82840254 | MS.gene065069:intron | 35.0% | |
| TTATGATATTCTTACCTGGG+GGG | + | chr1.2:82838775-82838794 | MS.gene065069:intron | 35.0% | |
| TTGATTCATCAGCAACAACA+AGG | - | chr1.2:82838041-82838060 | None:intergenic | 35.0% | |
| TTGCTGATGAATCAATTGGA+AGG | + | chr1.2:82838046-82838065 | MS.gene065069:CDS | 35.0% | |
| TTTCAGAGTTCGGAAATGTT+TGG | - | chr1.2:82840571-82840590 | None:intergenic | 35.0% | |
| ! | AAAATAGAGGACTTTGAGAG+GGG | - | chr1.2:82839574-82839593 | None:intergenic | 35.0% |
| ! | ATTATGGGTTATTGCTTGTG+GGG | + | chr1.2:82840740-82840759 | MS.gene065069:CDS | 35.0% |
| ! | CAAGACGATAGAGTATCATA+AGG | + | chr1.2:82838873-82838892 | MS.gene065069:intron | 35.0% |
| ! | CGCTTGATCCTGTAAATTTT+TGG | - | chr1.2:82838946-82838965 | None:intergenic | 35.0% |
| ! | GAATGCATGAGTGTGTTATT+AGG | - | chr1.2:82838446-82838465 | None:intergenic | 35.0% |
| ! | GAGTGTTCCTTTTGTGTTTT+TGG | + | chr1.2:82838068-82838087 | MS.gene065069:CDS | 35.0% |
| ! | GATGTTTAGGCATACTGATT+AGG | + | chr1.2:82839839-82839858 | MS.gene065069:intron | 35.0% |
| ! | TAGGCATACTGATTAGGATT+TGG | + | chr1.2:82839845-82839864 | MS.gene065069:intron | 35.0% |
| ! | TTCCTCTTAGACAATGGATT+CGG | + | chr1.2:82837638-82837657 | MS.gene065069:CDS | 35.0% |
| !! | ATACTACCTAGTCTTATGTC+TGG | + | chr1.2:82838530-82838549 | MS.gene065069:intron | 35.0% |
| !! | ATTCAAGCATTGAACAGCAA+TGG | - | chr1.2:82837561-82837580 | None:intergenic | 35.0% |
| !! | GTGTATTTGGTGCTATTTGA+AGG | - | chr1.2:82837590-82837609 | None:intergenic | 35.0% |
| !! | TTTAGTTCTGTCGTCATACA+CGG | + | chr1.2:82837801-82837820 | MS.gene065069:intron | 35.0% |
| !!! | ATTTGCACTCGTTGTTTTGA+AGG | + | chr1.2:82840463-82840482 | MS.gene065069:intron | 35.0% |
| !!! | GCATTTTCTAAGGCATTGTT+TGG | + | chr1.2:82839298-82839317 | MS.gene065069:intron | 35.0% |
| !!! | GTATTTTGATCTCGTTATGC+AGG | + | chr1.2:82838293-82838312 | MS.gene065069:intron | 35.0% |
| !!! | TCCTTTTGTGTTTTTGGAAC+GGG | + | chr1.2:82838074-82838093 | MS.gene065069:CDS | 35.0% |
| !!! | TGGAGCCAATTTTTTTTGGA+AGG | + | chr1.2:82839686-82839705 | MS.gene065069:intron | 35.0% |
| AATCTTATAAAGCCATGGCC+TGG | - | chr1.2:82840054-82840073 | None:intergenic | 40.0% | |
| AATCTTCATCTAGTCCCACT+CGG | - | chr1.2:82839256-82839275 | None:intergenic | 40.0% | |
| ACAGAAAGTTCCGTCTCTTT+AGG | - | chr1.2:82839662-82839681 | None:intergenic | 40.0% | |
| ACCCGTTCCAAAAACACAAA+AGG | - | chr1.2:82838078-82838097 | None:intergenic | 40.0% | |
| AGACCCTAAATCAGCTCATT+GGG | - | chr1.2:82837860-82837879 | None:intergenic | 40.0% | |
| ATTTACTAGATCTGCTGCCA+TGG | + | chr1.2:82837978-82837997 | MS.gene065069:intron | 40.0% | |
| CACATGTTATGTAACAGCCA+TGG | - | chr1.2:82837998-82838017 | None:intergenic | 40.0% | |
| CGTCACATGGCATGATTATA+TGG | - | chr1.2:82837829-82837848 | None:intergenic | 40.0% | |
| CTAATCAACTCCACCTAGTT+TGG | + | chr1.2:82838737-82838756 | MS.gene065069:intron | 40.0% | |
| CTCAAATAACTGAGGTCAAG+GGG | + | chr1.2:82838389-82838408 | MS.gene065069:CDS | 40.0% | |
| CTGGAAGTTAGAGGTAAGAT+AGG | + | chr1.2:82838920-82838939 | MS.gene065069:intron | 40.0% | |
| GAATCTCCAAATGAAGCTGA+TGG | + | chr1.2:82840686-82840705 | MS.gene065069:CDS | 40.0% | |
| GATGACTTTAACCAGCGTTA+TGG | + | chr1.2:82838102-82838121 | MS.gene065069:CDS | 40.0% | |
| GCAAACAAAGCCTAAAGAGA+CGG | + | chr1.2:82839649-82839668 | MS.gene065069:intron | 40.0% | |
| GCAACAGTCTTCAAATTTGC+AGG | - | chr1.2:82837780-82837799 | None:intergenic | 40.0% | |
| GCATGCATATAATGCTCAAC+TGG | - | chr1.2:82839280-82839299 | None:intergenic | 40.0% | |
| GCTCAAATAACTGAGGTCAA+GGG | + | chr1.2:82838388-82838407 | MS.gene065069:CDS | 40.0% | |
| GGAGCAAGTGGAAAAAATAG+AGG | - | chr1.2:82839587-82839606 | None:intergenic | 40.0% | |
| GTACATCCAGACATAAGACT+AGG | - | chr1.2:82838539-82838558 | None:intergenic | 40.0% | |
| GTTAAATTGGGATACTGCAG+AGG | + | chr1.2:82840234-82840253 | MS.gene065069:intron | 40.0% | |
| GTTGAAGGCTCAAATAACTG+AGG | + | chr1.2:82838381-82838400 | MS.gene065069:CDS | 40.0% | |
| TAATACTAGCACCATAACGC+TGG | - | chr1.2:82838116-82838135 | None:intergenic | 40.0% | |
| TACCGAATCCATTGTCTAAG+AGG | - | chr1.2:82837643-82837662 | None:intergenic | 40.0% | |
| TAGACCCTAAATCAGCTCAT+TGG | - | chr1.2:82837861-82837880 | None:intergenic | 40.0% | |
| TGTTGATCCAGTGATATGAG+AGG | - | chr1.2:82839873-82839892 | None:intergenic | 40.0% | |
| TTATGCAGGCCAAGTCTTAA+GGG | + | chr1.2:82838307-82838326 | MS.gene065069:intron | 40.0% | |
| TTTGAAGGAACTCGTATAGG+GGG | - | chr1.2:82839504-82839523 | None:intergenic | 40.0% | |
| TTTGGATCCTCTCATATCAC+TGG | + | chr1.2:82839863-82839882 | MS.gene065069:intron | 40.0% | |
| ! | AAAGTATCCAGCCATGATGA+AGG | + | chr1.2:82839930-82839949 | MS.gene065069:intron | 40.0% |
| ! | ACTAGGTGGAGTTGATTAGA+TGG | - | chr1.2:82838736-82838755 | None:intergenic | 40.0% |
| ! | AGAAGCTTTTCCCATTAGGT+CGG | - | chr1.2:82839056-82839075 | None:intergenic | 40.0% |
| ! | ATGTTTTCAGCGCTAATGCT+TGG | + | chr1.2:82838502-82838521 | MS.gene065069:intron | 40.0% |
| ! | GGAGAAGATTGAACTTTTGG+TGG | + | chr1.2:82840499-82840518 | MS.gene065069:CDS | 40.0% |
| ! | TGGGGAGAAGATTGAACTTT+TGG | + | chr1.2:82840496-82840515 | MS.gene065069:CDS | 40.0% |
| ! | TTATGGGTTATTGCTTGTGG+GGG | + | chr1.2:82840741-82840760 | MS.gene065069:CDS | 40.0% |
| !! | GTCTCTTTAGGCTTTGTTTG+CGG | - | chr1.2:82839650-82839669 | None:intergenic | 40.0% |
| !! | TAAGGCATTGTTTGGGAGTT+TGG | + | chr1.2:82839306-82839325 | MS.gene065069:intron | 40.0% |
| !! | TTTAGGCTTTGTTTGCGGTT+TGG | - | chr1.2:82839645-82839664 | None:intergenic | 40.0% |
| !!! | ACTCGTTGTTTTGAAGGTGT+TGG | + | chr1.2:82840469-82840488 | MS.gene065069:intron | 40.0% |
| !!! | TTTTGAAGGTGTTGGATCGT+GGG | + | chr1.2:82840477-82840496 | MS.gene065069:intron | 40.0% |
| AACGGAAAACTTGCAGTTCC+AGG | + | chr1.2:82840526-82840545 | MS.gene065069:CDS | 45.0% | |
| ATCTTCATCTAGTCCCACTC+GGG | - | chr1.2:82839255-82839274 | None:intergenic | 45.0% | |
| ATGTCACTAACCCGACCTAA+TGG | + | chr1.2:82839042-82839061 | MS.gene065069:intron | 45.0% | |
| CATCATCATCAGCAAGTGGA+TGG | - | chr1.2:82838152-82838171 | None:intergenic | 45.0% | |
| CATTGTTTGGGAGTTTGGAG+GGG | + | chr1.2:82839311-82839330 | MS.gene065069:intron | 45.0% | |
| CTCCAAATGAAGCTGATGGT+GGG | + | chr1.2:82840690-82840709 | MS.gene065069:CDS | 45.0% | |
| GAAGGTAGTCTGGAAGTTAG+AGG | + | chr1.2:82838911-82838930 | MS.gene065069:intron | 45.0% | |
| GAGGGATTAGGGAAAAAGGA+AGG | - | chr1.2:82839608-82839627 | None:intergenic | 45.0% | |
| GCATTGTTTGGGAGTTTGGA+GGG | + | chr1.2:82839310-82839329 | MS.gene065069:intron | 45.0% | |
| GGCTCAAATAACTGAGGTCA+AGG | + | chr1.2:82838387-82838406 | MS.gene065069:CDS | 45.0% | |
| GTTATGCAGGCCAAGTCTTA+AGG | + | chr1.2:82838306-82838325 | MS.gene065069:intron | 45.0% | |
| TAGCTAGAGGACCTTCATCA+TGG | - | chr1.2:82839944-82839963 | None:intergenic | 45.0% | |
| TATGCAGGCCAAGTCTTAAG+GGG | + | chr1.2:82838308-82838327 | MS.gene065069:intron | 45.0% | |
| TCCTCATCATCATCAGCAAG+TGG | - | chr1.2:82838156-82838175 | None:intergenic | 45.0% | |
| TCTCCAAATGAAGCTGATGG+TGG | + | chr1.2:82840689-82840708 | MS.gene065069:CDS | 45.0% | |
| TCTGACAGTTAGACCAACAG+AGG | + | chr1.2:82840187-82840206 | MS.gene065069:intron | 45.0% | |
| TGAGGTCAAGGGGATAATGA+TGG | + | chr1.2:82838399-82838418 | MS.gene065069:CDS | 45.0% | |
| TGCATATGCCCCTTAAGACT+TGG | - | chr1.2:82838319-82838338 | None:intergenic | 45.0% | |
| TGTCACTAACCCGACCTAAT+GGG | + | chr1.2:82839043-82839062 | MS.gene065069:intron | 45.0% | |
| TGTGGGGGTGAAAACGTATA+GGG | + | chr1.2:82839344-82839363 | MS.gene065069:intron | 45.0% | |
| ! | ATGGCCCAATGAGCTGATTT+AGG | + | chr1.2:82837853-82837872 | MS.gene065069:intron | 45.0% |
| ! | GAAGCTTTTCCCATTAGGTC+GGG | - | chr1.2:82839055-82839074 | None:intergenic | 45.0% |
| ! | TCCACTTGCTGATGATGATG+AGG | + | chr1.2:82838152-82838171 | MS.gene065069:CDS | 45.0% |
| ! | TGGCCCAATGAGCTGATTTA+GGG | + | chr1.2:82837854-82837873 | MS.gene065069:intron | 45.0% |
| !! | AATCAGGAAAGCACCTGTTG+TGG | + | chr1.2:82838849-82838868 | MS.gene065069:intron | 45.0% |
| !! | TTTGAAGGTGTTGGATCGTG+GGG | + | chr1.2:82840478-82840497 | MS.gene065069:intron | 45.0% |
| !!! | GTTTTGAAGGTGTTGGATCG+TGG | + | chr1.2:82840476-82840495 | MS.gene065069:intron | 45.0% |
| !!! | TGTGTTTTTGGAACGGGTGA+AGG | + | chr1.2:82838080-82838099 | MS.gene065069:CDS | 45.0% |
| AAGGAACTCGTATAGGGGGA+AGG | - | chr1.2:82839500-82839519 | None:intergenic | 50.0% | |
| AATCAGCTCATTGGGCCATG+TGG | - | chr1.2:82837852-82837871 | None:intergenic | 50.0% | |
| ACTCCATTGAATTGCCCGAG+TGG | + | chr1.2:82839238-82839257 | MS.gene065069:intron | 50.0% | |
| ACTCGGGCAATTCAATGGAG+TGG | - | chr1.2:82839239-82839258 | None:intergenic | 50.0% | |
| AGGGGAGGGATTAGGGAAAA+AGG | - | chr1.2:82839612-82839631 | None:intergenic | 50.0% | |
| CATGTGCTAGTGTCTCTTCC+AGG | + | chr1.2:82840033-82840052 | MS.gene065069:intron | 50.0% | |
| CTCCATTGAATTGCCCGAGT+GGG | + | chr1.2:82839239-82839258 | MS.gene065069:intron | 50.0% | |
| CTCCCACCATCAGCTTCATT+TGG | - | chr1.2:82840695-82840714 | None:intergenic | 50.0% | |
| CTGGAAGAGACACTAGCACA+TGG | - | chr1.2:82840035-82840054 | None:intergenic | 50.0% | |
| CTGTGGGGGTGAAAACGTAT+AGG | + | chr1.2:82839343-82839362 | MS.gene065069:intron | 50.0% | |
| GAGACACTAGCACATGGATC+TGG | - | chr1.2:82840029-82840048 | None:intergenic | 50.0% | |
| GGCAGCTAAGAAGGAAGATG+TGG | + | chr1.2:82840658-82840677 | MS.gene065069:CDS | 50.0% | |
| GGCATTGTTTGGGAGTTTGG+AGG | + | chr1.2:82839309-82839328 | MS.gene065069:intron | 50.0% | |
| GGGAAAAAGGAAGGAGCAAG+TGG | - | chr1.2:82839599-82839618 | None:intergenic | 50.0% | |
| TAGAGGACCTTCATCATGGC+TGG | - | chr1.2:82839940-82839959 | None:intergenic | 50.0% | |
| TCTATCGTCTTGGCCACAAC+AGG | - | chr1.2:82838865-82838884 | None:intergenic | 50.0% | |
| TTTAGGCTGACAGCTTCCAG+AGG | + | chr1.2:82840628-82840647 | MS.gene065069:intron | 50.0% | |
| ! | ATAGAGGACTTTGAGAGGGG+AGG | - | chr1.2:82839571-82839590 | None:intergenic | 50.0% |
| ! | GTTTGCGGTTTGGAAGGCAA+TGG | - | chr1.2:82839635-82839654 | None:intergenic | 50.0% |
| ! | TAGAGGACTTTGAGAGGGGA+GGG | - | chr1.2:82839570-82839589 | None:intergenic | 50.0% |
| !! | CAAATGAAGCTGATGGTGGG+AGG | + | chr1.2:82840693-82840712 | MS.gene065069:CDS | 50.0% |
| !! | GGCTTTGTTTGCGGTTTGGA+AGG | - | chr1.2:82839641-82839660 | None:intergenic | 50.0% |
| ATTCTTACCTGGGGGGACTC+AGG | + | chr1.2:82838782-82838801 | MS.gene065069:intron | 55.0% | |
| CTAGTGTCTCTTCCAGGCCA+TGG | + | chr1.2:82840039-82840058 | MS.gene065069:intron | 55.0% | |
| GCAATGGAGGGGAGGGATTA+GGG | - | chr1.2:82839619-82839638 | None:intergenic | 55.0% | |
| GTCCCACTCGGGCAATTCAA+TGG | - | chr1.2:82839244-82839263 | None:intergenic | 55.0% | |
| TCATGCCATGTGACGCCACA+TGG | + | chr1.2:82837834-82837853 | MS.gene065069:intron | 55.0% | |
| TTGGAAGGCAATGGAGGGGA+GGG | - | chr1.2:82839626-82839645 | None:intergenic | 55.0% | |
| TTTGGAAGGCAATGGAGGGG+AGG | - | chr1.2:82839627-82839646 | None:intergenic | 55.0% | |
| TTTGGGAGTTTGGAGGGGAG+TGG | + | chr1.2:82839316-82839335 | MS.gene065069:intron | 55.0% | |
| ! | ACTTTGAGAGGGGAGGGCTT+TGG | - | chr1.2:82839564-82839583 | None:intergenic | 55.0% |
| ! | CGGTTTGGAAGGCAATGGAG+GGG | - | chr1.2:82839630-82839649 | None:intergenic | 55.0% |
| ! | CTTTGAGAGGGGAGGGCTTT+GGG | - | chr1.2:82839563-82839582 | None:intergenic | 55.0% |
| ! | GCGGTTTGGAAGGCAATGGA+GGG | - | chr1.2:82839631-82839650 | None:intergenic | 55.0% |
| ! | TGCGGTTTGGAAGGCAATGG+AGG | - | chr1.2:82839632-82839651 | None:intergenic | 55.0% |
| !! | ATGAAGCTGATGGTGGGAGG+AGG | + | chr1.2:82840696-82840715 | MS.gene065069:CDS | 55.0% |
| GCTGACAGCTTCCAGAGGCA+GGG | + | chr1.2:82840633-82840652 | MS.gene065069:intron | 60.0% | |
| GGAGTTTGGAGGGGAGTGGA+GGG | + | chr1.2:82839320-82839339 | MS.gene065069:intron | 60.0% | |
| GGCAATGGAGGGGAGGGATT+AGG | - | chr1.2:82839620-82839639 | None:intergenic | 60.0% | |
| TTGGGCCATGTGGCGTCACA+TGG | - | chr1.2:82837842-82837861 | None:intergenic | 60.0% | |
| ACAGCTTCCAGAGGCAGGGC+AGG | + | chr1.2:82840637-82840656 | MS.gene065069:intron | 65.0% | |
| AGTGCTTCCTGAGTCCCCCC+AGG | - | chr1.2:82838792-82838811 | None:intergenic | 65.0% | |
| GCAGAGGGTCTGAGTCCCGT+TGG | + | chr1.2:82840250-82840269 | MS.gene065069:intron | 65.0% | |
| GGCAGGGCAGGCAGCTAAGA+AGG | + | chr1.2:82840649-82840668 | MS.gene065069:CDS | 65.0% | |
| GGCTGACAGCTTCCAGAGGC+AGG | + | chr1.2:82840632-82840651 | MS.gene065069:intron | 65.0% | |
| GGGAGTTTGGAGGGGAGTGG+AGG | + | chr1.2:82839319-82839338 | MS.gene065069:intron | 65.0% | |
| TTAGCTGCCTGCCCTGCCTC+TGG | - | chr1.2:82840647-82840666 | None:intergenic | 65.0% | |
| !! | TGAGAGGGGAGGGCTTTGGG+CGG | - | chr1.2:82839560-82839579 | None:intergenic | 65.0% |
| AGGGGAGTGGAGGGCTGTGG+GGG | + | chr1.2:82839329-82839348 | MS.gene065069:intron | 70.0% | |
| GAGGGGAGTGGAGGGCTGTG+GGG | + | chr1.2:82839328-82839347 | MS.gene065069:intron | 70.0% | |
| GGAGGGGAGTGGAGGGCTGT+GGG | + | chr1.2:82839327-82839346 | MS.gene065069:intron | 70.0% | |
| TGGAGGGGAGTGGAGGGCTG+TGG | + | chr1.2:82839326-82839345 | MS.gene065069:intron | 70.0% | |
| !! | GAGAGGGGAGGGCTTTGGGC+GGG | - | chr1.2:82839559-82839578 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 82837470 | 82840787 | 82837470 | ID=MS.gene065069 |
| chr1.2 | mRNA | 82837470 | 82840787 | 82837470 | ID=MS.gene065069.t1;Parent=MS.gene065069 |
| chr1.2 | exon | 82837470 | 82837659 | 82837470 | ID=MS.gene065069.t1.exon1;Parent=MS.gene065069.t1 |
| chr1.2 | CDS | 82837470 | 82837659 | 82837470 | ID=cds.MS.gene065069.t1;Parent=MS.gene065069.t1 |
| chr1.2 | exon | 82838034 | 82838232 | 82838034 | ID=MS.gene065069.t1.exon2;Parent=MS.gene065069.t1 |
| chr1.2 | CDS | 82838034 | 82838232 | 82838034 | ID=cds.MS.gene065069.t1;Parent=MS.gene065069.t1 |
| chr1.2 | exon | 82838315 | 82838435 | 82838315 | ID=MS.gene065069.t1.exon3;Parent=MS.gene065069.t1 |
| chr1.2 | CDS | 82838315 | 82838435 | 82838315 | ID=cds.MS.gene065069.t1;Parent=MS.gene065069.t1 |
| chr1.2 | exon | 82840485 | 82840547 | 82840485 | ID=MS.gene065069.t1.exon4;Parent=MS.gene065069.t1 |
| chr1.2 | CDS | 82840485 | 82840547 | 82840485 | ID=cds.MS.gene065069.t1;Parent=MS.gene065069.t1 |
| chr1.2 | exon | 82840641 | 82840787 | 82840641 | ID=MS.gene065069.t1.exon5;Parent=MS.gene065069.t1 |
| chr1.2 | CDS | 82840641 | 82840787 | 82840641 | ID=cds.MS.gene065069.t1;Parent=MS.gene065069.t1 |
| Gene Sequence |
| Protein sequence |
