Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47597.t1 | XP_013460957.1 | 97.8 | 323 | 7 | 0 | 1 | 323 | 1 | 323 | 4.20E-153 | 550.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47597.t1 | Q94K71 | 87.8 | 245 | 30 | 0 | 79 | 323 | 75 | 319 | 4.0e-120 | 432.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47597.t1 | G8A2H2 | 97.8 | 323 | 7 | 0 | 1 | 323 | 1 | 323 | 3.0e-153 | 550.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene47597 | 0.860808 | 1.60E-63 | -1.69E-46 |
| MS.gene049217 | MS.gene47597 | 0.831223 | 1.89E-55 | -1.69E-46 |
| MS.gene049222 | MS.gene47597 | 0.871321 | 7.47E-67 | -1.69E-46 |
| MS.gene049232 | MS.gene47597 | 0.81527 | 1.01E-51 | -1.69E-46 |
| MS.gene049285 | MS.gene47597 | 0.877243 | 7.34E-69 | -1.69E-46 |
| MS.gene049320 | MS.gene47597 | 0.868376 | 6.84E-66 | -1.69E-46 |
| MS.gene049427 | MS.gene47597 | 0.805677 | 1.19E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene47597 | 0.874756 | 5.26E-68 | -1.69E-46 |
| MS.gene049615 | MS.gene47597 | 0.803401 | 3.55E-49 | -1.69E-46 |
| MS.gene049633 | MS.gene47597 | 0.868221 | 7.67E-66 | -1.69E-46 |
| MS.gene05010 | MS.gene47597 | 0.831823 | 1.34E-55 | -1.69E-46 |
| MS.gene050163 | MS.gene47597 | 0.852836 | 3.56E-61 | -1.69E-46 |
| MS.gene050165 | MS.gene47597 | 0.849752 | 2.64E-60 | -1.69E-46 |
| MS.gene050170 | MS.gene47597 | 0.805796 | 1.12E-49 | -1.69E-46 |
| MS.gene050323 | MS.gene47597 | 0.815829 | 7.57E-52 | -1.69E-46 |
| MS.gene050333 | MS.gene47597 | 0.828005 | 1.14E-54 | -1.69E-46 |
| MS.gene050496 | MS.gene47597 | 0.83731 | 5.60E-57 | -1.69E-46 |
| MS.gene050504 | MS.gene47597 | 0.855577 | 5.75E-62 | -1.69E-46 |
| MS.gene050518 | MS.gene47597 | 0.869638 | 2.67E-66 | -1.69E-46 |
| MS.gene050538 | MS.gene47597 | 0.835089 | 2.06E-56 | -1.69E-46 |
| MS.gene050577 | MS.gene47597 | 0.820916 | 5.33E-53 | -1.69E-46 |
| MS.gene050593 | MS.gene47597 | 0.887656 | 1.18E-72 | -1.69E-46 |
| MS.gene050612 | MS.gene47597 | 0.874412 | 6.89E-68 | -1.69E-46 |
| MS.gene050675 | MS.gene47597 | 0.897801 | 9.88E-77 | -1.69E-46 |
| MS.gene050690 | MS.gene47597 | 0.801086 | 1.06E-48 | -1.69E-46 |
| MS.gene050699 | MS.gene47597 | 0.883788 | 3.34E-71 | -1.69E-46 |
| MS.gene050747 | MS.gene47597 | 0.851125 | 1.09E-60 | -1.69E-46 |
| MS.gene050772 | MS.gene47597 | 0.884535 | 1.77E-71 | -1.69E-46 |
| MS.gene05080 | MS.gene47597 | 0.860224 | 2.40E-63 | -1.69E-46 |
| MS.gene050868 | MS.gene47597 | 0.823729 | 1.18E-53 | -1.69E-46 |
| MS.gene050871 | MS.gene47597 | 0.820936 | 5.27E-53 | -1.69E-46 |
| MS.gene050950 | MS.gene47597 | 0.866412 | 2.91E-65 | -1.69E-46 |
| MS.gene050986 | MS.gene47597 | 0.87739 | 6.53E-69 | -1.69E-46 |
| MS.gene051228 | MS.gene47597 | 0.835227 | 1.90E-56 | -1.69E-46 |
| MS.gene051317 | MS.gene47597 | 0.836569 | 8.66E-57 | -1.69E-46 |
| MS.gene051387 | MS.gene47597 | 0.804053 | 2.60E-49 | -1.69E-46 |
| MS.gene051434 | MS.gene47597 | 0.80889 | 2.48E-50 | -1.69E-46 |
| MS.gene051551 | MS.gene47597 | 0.814828 | 1.26E-51 | -1.69E-46 |
| MS.gene051617 | MS.gene47597 | 0.833035 | 6.72E-56 | -1.69E-46 |
| MS.gene051666 | MS.gene47597 | 0.816511 | 5.33E-52 | -1.69E-46 |
| MS.gene051810 | MS.gene47597 | 0.86419 | 1.45E-64 | -1.69E-46 |
| MS.gene051838 | MS.gene47597 | 0.828141 | 1.06E-54 | -1.69E-46 |
| MS.gene051858 | MS.gene47597 | 0.816348 | 5.79E-52 | -1.69E-46 |
| MS.gene051949 | MS.gene47597 | 0.829436 | 5.15E-55 | -1.69E-46 |
| MS.gene052164 | MS.gene47597 | 0.825678 | 4.11E-54 | -1.69E-46 |
| MS.gene052271 | MS.gene47597 | 0.819109 | 1.38E-52 | -1.69E-46 |
| MS.gene052379 | MS.gene47597 | 0.802209 | 6.25E-49 | -1.69E-46 |
| MS.gene052486 | MS.gene47597 | 0.804425 | 2.17E-49 | -1.69E-46 |
| MS.gene052503 | MS.gene47597 | 0.806069 | 9.84E-50 | -1.69E-46 |
| MS.gene052506 | MS.gene47597 | 0.837235 | 5.86E-57 | -1.69E-46 |
| MS.gene052510 | MS.gene47597 | 0.811734 | 6.04E-51 | -1.69E-46 |
| MS.gene052615 | MS.gene47597 | 0.813652 | 2.30E-51 | -1.69E-46 |
| MS.gene052822 | MS.gene47597 | 0.846443 | 2.16E-59 | -1.69E-46 |
| MS.gene052870 | MS.gene47597 | 0.81635 | 5.79E-52 | -1.69E-46 |
| MS.gene052872 | MS.gene47597 | 0.828466 | 8.85E-55 | -1.69E-46 |
| MS.gene052916 | MS.gene47597 | 0.809074 | 2.26E-50 | -1.69E-46 |
| MS.gene052966 | MS.gene47597 | 0.847806 | 9.16E-60 | -1.69E-46 |
| MS.gene053009 | MS.gene47597 | 0.820473 | 6.73E-53 | -1.69E-46 |
| MS.gene053104 | MS.gene47597 | 0.80262 | 5.15E-49 | -1.69E-46 |
| MS.gene053107 | MS.gene47597 | 0.825635 | 4.21E-54 | -1.69E-46 |
| MS.gene053203 | MS.gene47597 | 0.888039 | 8.40E-73 | -1.69E-46 |
| MS.gene053207 | MS.gene47597 | 0.888127 | 7.77E-73 | -1.69E-46 |
| MS.gene053213 | MS.gene47597 | 0.878847 | 2.02E-69 | -1.69E-46 |
| MS.gene053286 | MS.gene47597 | 0.877709 | 5.05E-69 | -1.69E-46 |
| MS.gene053436 | MS.gene47597 | 0.814745 | 1.32E-51 | -1.69E-46 |
| MS.gene053479 | MS.gene47597 | 0.813762 | 2.17E-51 | -1.69E-46 |
| MS.gene053574 | MS.gene47597 | 0.875441 | 3.07E-68 | -1.69E-46 |
| MS.gene053632 | MS.gene47597 | 0.817328 | 3.49E-52 | -1.69E-46 |
| MS.gene053824 | MS.gene47597 | 0.821181 | 4.63E-53 | -1.69E-46 |
| MS.gene054595 | MS.gene47597 | 0.807897 | 4.04E-50 | -1.69E-46 |
| MS.gene054600 | MS.gene47597 | 0.868888 | 4.67E-66 | -1.69E-46 |
| MS.gene054642 | MS.gene47597 | 0.886373 | 3.62E-72 | -1.69E-46 |
| MS.gene05470 | MS.gene47597 | 0.812251 | 4.66E-51 | -1.69E-46 |
| MS.gene054927 | MS.gene47597 | 0.82827 | 9.87E-55 | -1.69E-46 |
| MS.gene054954 | MS.gene47597 | 0.868487 | 6.30E-66 | -1.69E-46 |
| MS.gene055206 | MS.gene47597 | 0.840815 | 6.93E-58 | -1.69E-46 |
| MS.gene055224 | MS.gene47597 | 0.802981 | 4.33E-49 | -1.69E-46 |
| MS.gene055289 | MS.gene47597 | 0.804402 | 2.20E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene47597 | 0.866753 | 2.26E-65 | -1.69E-46 |
| MS.gene055502 | MS.gene47597 | 0.856753 | 2.60E-62 | -1.69E-46 |
| MS.gene055577 | MS.gene47597 | 0.897576 | 1.23E-76 | -1.69E-46 |
| MS.gene055647 | MS.gene47597 | 0.846322 | 2.34E-59 | -1.69E-46 |
| MS.gene055722 | MS.gene47597 | 0.87082 | 1.09E-66 | -1.69E-46 |
| MS.gene055748 | MS.gene47597 | 0.833911 | 4.06E-56 | -1.69E-46 |
| MS.gene055750 | MS.gene47597 | 0.81145 | 6.96E-51 | -1.69E-46 |
| MS.gene055751 | MS.gene47597 | 0.832911 | 7.21E-56 | -1.69E-46 |
| MS.gene055776 | MS.gene47597 | 0.817679 | 2.91E-52 | -1.69E-46 |
| MS.gene05589 | MS.gene47597 | 0.800026 | 1.75E-48 | -1.69E-46 |
| MS.gene05592 | MS.gene47597 | 0.84136 | 4.98E-58 | -1.69E-46 |
| MS.gene055941 | MS.gene47597 | 0.833798 | 4.34E-56 | -1.69E-46 |
| MS.gene056083 | MS.gene47597 | 0.866174 | 3.46E-65 | -1.69E-46 |
| MS.gene056374 | MS.gene47597 | 0.852723 | 3.83E-61 | -1.69E-46 |
| MS.gene056504 | MS.gene47597 | 0.826386 | 2.79E-54 | -1.69E-46 |
| MS.gene056510 | MS.gene47597 | 0.866023 | 3.86E-65 | -1.69E-46 |
| MS.gene056657 | MS.gene47597 | 0.872119 | 4.06E-67 | -1.69E-46 |
| MS.gene05666 | MS.gene47597 | 0.819258 | 1.28E-52 | -1.69E-46 |
| MS.gene056692 | MS.gene47597 | 0.836068 | 1.16E-56 | -1.69E-46 |
| MS.gene056877 | MS.gene47597 | 0.814357 | 1.61E-51 | -1.69E-46 |
| MS.gene056897 | MS.gene47597 | 0.811341 | 7.35E-51 | -1.69E-46 |
| MS.gene056947 | MS.gene47597 | 0.822007 | 2.98E-53 | -1.69E-46 |
| MS.gene057076 | MS.gene47597 | 0.836758 | 7.76E-57 | -1.69E-46 |
| MS.gene057129 | MS.gene47597 | 0.805867 | 1.09E-49 | -1.69E-46 |
| MS.gene057331 | MS.gene47597 | 0.925348 | 2.07E-90 | -1.69E-46 |
| MS.gene057332 | MS.gene47597 | 0.822 | 2.99E-53 | -1.69E-46 |
| MS.gene057416 | MS.gene47597 | 0.866851 | 2.11E-65 | -1.69E-46 |
| MS.gene057658 | MS.gene47597 | 0.833501 | 5.14E-56 | -1.69E-46 |
| MS.gene057734 | MS.gene47597 | 0.807989 | 3.86E-50 | -1.69E-46 |
| MS.gene057831 | MS.gene47597 | 0.835806 | 1.35E-56 | -1.69E-46 |
| MS.gene058019 | MS.gene47597 | 0.820113 | 8.14E-53 | -1.69E-46 |
| MS.gene058323 | MS.gene47597 | 0.815583 | 8.58E-52 | -1.69E-46 |
| MS.gene058338 | MS.gene47597 | 0.805273 | 1.45E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene47597 | 0.83663 | 8.36E-57 | -1.69E-46 |
| MS.gene058419 | MS.gene47597 | 0.860923 | 1.47E-63 | -1.69E-46 |
| MS.gene058544 | MS.gene47597 | 0.864624 | 1.06E-64 | -1.69E-46 |
| MS.gene058723 | MS.gene47597 | 0.874787 | 5.14E-68 | -1.69E-46 |
| MS.gene058773 | MS.gene47597 | 0.882115 | 1.37E-70 | -1.69E-46 |
| MS.gene058838 | MS.gene47597 | 0.836295 | 1.02E-56 | -1.69E-46 |
| MS.gene05883 | MS.gene47597 | 0.842775 | 2.10E-58 | -1.69E-46 |
| MS.gene059022 | MS.gene47597 | 0.861453 | 1.01E-63 | -1.69E-46 |
| MS.gene059023 | MS.gene47597 | 0.868599 | 5.79E-66 | -1.69E-46 |
| MS.gene059029 | MS.gene47597 | 0.83699 | 6.77E-57 | -1.69E-46 |
| MS.gene05913 | MS.gene47597 | 0.819377 | 1.20E-52 | -1.69E-46 |
| MS.gene059181 | MS.gene47597 | 0.880842 | 3.93E-70 | -1.69E-46 |
| MS.gene05934 | MS.gene47597 | 0.829154 | 6.03E-55 | -1.69E-46 |
| MS.gene059536 | MS.gene47597 | 0.805082 | 1.58E-49 | -1.69E-46 |
| MS.gene059677 | MS.gene47597 | 0.872794 | 2.42E-67 | -1.69E-46 |
| MS.gene059718 | MS.gene47597 | 0.881701 | 1.93E-70 | -1.69E-46 |
| MS.gene059756 | MS.gene47597 | 0.845444 | 4.05E-59 | -1.69E-46 |
| MS.gene059865 | MS.gene47597 | 0.863652 | 2.14E-64 | -1.69E-46 |
| MS.gene059902 | MS.gene47597 | 0.812999 | 3.20E-51 | -1.69E-46 |
| MS.gene059960 | MS.gene47597 | 0.810119 | 1.35E-50 | -1.69E-46 |
| MS.gene06000 | MS.gene47597 | 0.801025 | 1.09E-48 | -1.69E-46 |
| MS.gene060482 | MS.gene47597 | 0.813891 | 2.03E-51 | -1.69E-46 |
| MS.gene060703 | MS.gene47597 | 0.812786 | 3.56E-51 | -1.69E-46 |
| MS.gene060762 | MS.gene47597 | 0.848961 | 4.39E-60 | -1.69E-46 |
| MS.gene06077 | MS.gene47597 | 0.828158 | 1.05E-54 | -1.69E-46 |
| MS.gene060804 | MS.gene47597 | 0.836539 | 8.82E-57 | -1.69E-46 |
| MS.gene060835 | MS.gene47597 | 0.85653 | 3.02E-62 | -1.69E-46 |
| MS.gene06092 | MS.gene47597 | 0.860462 | 2.03E-63 | -1.69E-46 |
| MS.gene060982 | MS.gene47597 | 0.858773 | 6.55E-63 | -1.69E-46 |
| MS.gene061150 | MS.gene47597 | 0.858123 | 1.02E-62 | -1.69E-46 |
| MS.gene061200 | MS.gene47597 | 0.816114 | 6.53E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47597.t1 | MTR_3g075230 | 99.381 | 323 | 2 | 0 | 1 | 323 | 1 | 323 | 0.0 | 661 |
| MS.gene47597.t1 | MTR_8g090025 | 40.486 | 247 | 127 | 6 | 82 | 311 | 65 | 308 | 9.73e-55 | 181 |
| MS.gene47597.t1 | MTR_8g090025 | 41.202 | 233 | 119 | 5 | 82 | 297 | 65 | 296 | 2.15e-54 | 181 |
| MS.gene47597.t1 | MTR_0937s0020 | 37.712 | 236 | 138 | 4 | 71 | 303 | 520 | 749 | 8.17e-38 | 143 |
| MS.gene47597.t1 | MTR_2g029350 | 34.868 | 152 | 90 | 5 | 82 | 227 | 74 | 222 | 2.46e-20 | 90.9 |
| MS.gene47597.t1 | MTR_7g112140 | 28.671 | 286 | 175 | 9 | 1 | 282 | 1 | 261 | 3.34e-13 | 70.9 |
| MS.gene47597.t1 | MTR_4g091060 | 32.609 | 138 | 92 | 1 | 182 | 319 | 34 | 170 | 3.96e-13 | 69.3 |
| MS.gene47597.t1 | MTR_7g112140 | 28.671 | 286 | 175 | 9 | 1 | 282 | 1 | 261 | 4.34e-13 | 70.5 |
| MS.gene47597.t1 | MTR_4g091060 | 32.609 | 138 | 92 | 1 | 182 | 319 | 93 | 229 | 1.64e-12 | 67.8 |
| MS.gene47597.t1 | MTR_4g091060 | 32.609 | 138 | 92 | 1 | 182 | 319 | 93 | 229 | 3.46e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47597.t1 | AT3G48420 | 81.588 | 277 | 47 | 2 | 50 | 323 | 44 | 319 | 5.63e-160 | 449 |
| MS.gene47597.t1 | AT4G39970 | 38.431 | 255 | 140 | 6 | 58 | 297 | 42 | 294 | 9.97e-51 | 171 |
| MS.gene47597.t1 | AT5G45170 | 30.380 | 237 | 148 | 9 | 10 | 233 | 1 | 233 | 2.58e-18 | 84.7 |
| MS.gene47597.t1 | AT5G45170 | 30.380 | 237 | 148 | 9 | 10 | 233 | 1 | 233 | 3.17e-18 | 84.7 |
| MS.gene47597.t1 | AT1G56500 | 29.675 | 246 | 129 | 8 | 55 | 282 | 43 | 262 | 2.23e-13 | 71.2 |
| MS.gene47597.t1 | AT1G56500 | 32.843 | 204 | 119 | 7 | 81 | 282 | 75 | 262 | 2.57e-13 | 71.2 |
| MS.gene47597.t1 | AT4G21470 | 29.661 | 236 | 140 | 9 | 79 | 310 | 10 | 223 | 7.26e-12 | 66.2 |
Find 69 sgRNAs with CRISPR-Local
Find 151 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCCTTCTTGTTGTGTTTA+AGG | 0.108233 | 3.3:+64968734 | None:intergenic |
| TACGGTGAGTTGCTTAAAAT+TGG | 0.209701 | 3.3:-64968080 | MS.gene47597:CDS |
| TCCTTTCTTGTTCACCTGTC+GGG | 0.284815 | 3.3:+64967924 | None:intergenic |
| CCACGTCTCCTGCAAATATC+TGG | 0.290444 | 3.3:+64967078 | None:intergenic |
| TGCAATAGTATCATGTTTAC+TGG | 0.316202 | 3.3:-64967123 | MS.gene47597:CDS |
| TCCCGAGGAGAGATTTGATT+TGG | 0.349050 | 3.3:-64966241 | MS.gene47597:CDS |
| GCAACTCAACCTACGCCTTC+TGG | 0.363138 | 3.3:+64968645 | None:intergenic |
| CAACAATGAAGCAGAGGAAA+TGG | 0.387924 | 3.3:+64968798 | None:intergenic |
| AACATACAGGCTTGTCGATC+AGG | 0.394903 | 3.3:-64967397 | MS.gene47597:intron |
| GCGAAAGACAGAACTATTCA+TGG | 0.402161 | 3.3:-64967876 | MS.gene47597:CDS |
| GATGCTGTATTTGACTTCAT+TGG | 0.403312 | 3.3:-64966270 | MS.gene47597:CDS |
| TTCCTTTCTTGTTCACCTGT+CGG | 0.403845 | 3.3:+64967923 | None:intergenic |
| TATGCATACCGCCTTCTCAT+TGG | 0.423723 | 3.3:+64967335 | None:intergenic |
| CTCTCGGTGTTGAACCTTCA+AGG | 0.431443 | 3.3:-64966863 | MS.gene47597:intron |
| GAGGAAAATCTTACTGGATC+AGG | 0.443590 | 3.3:+64967041 | None:intergenic |
| CTAGCAGCAGCTAAAGCAGC+TGG | 0.444999 | 3.3:-64966514 | MS.gene47597:CDS |
| GTGGTCGAGGACAGTGCAAT+AGG | 0.458037 | 3.3:-64966538 | MS.gene47597:CDS |
| GAGTTGCTCAGCCTCGGCTT+CGG | 0.462076 | 3.3:-64968629 | MS.gene47597:CDS |
| AAGAGCTTTGACAGTGAAAG+AGG | 0.462364 | 3.3:+64968687 | None:intergenic |
| TGAATTGTGCAGAAAGAACT+AGG | 0.469246 | 3.3:-64968125 | MS.gene47597:intron |
| AGAAAGAACTAGGCGTTACA+TGG | 0.472435 | 3.3:-64968115 | MS.gene47597:CDS |
| TCACCTGTCGGGGCATTCGC+AGG | 0.476166 | 3.3:+64967935 | None:intergenic |
| ACTATTATGACATACCTTGA+AGG | 0.477501 | 3.3:+64966849 | None:intergenic |
| TAGGTTGAGTTGCTCAGCCT+CGG | 0.485144 | 3.3:-64968635 | MS.gene47597:CDS |
| CCCCGACAGGTGAACAAGAA+AGG | 0.485593 | 3.3:-64967925 | MS.gene47597:CDS |
| GCTTGCAGCTAGTATATAGA+TGG | 0.488092 | 3.3:+64966887 | None:intergenic |
| GCCAAATCAAATCTCTCCTC+GGG | 0.495277 | 3.3:+64966240 | None:intergenic |
| CCTTTCTTGTTCACCTGTCG+GGG | 0.500466 | 3.3:+64967925 | None:intergenic |
| TGCCAAATCAAATCTCTCCT+CGG | 0.501576 | 3.3:+64966239 | None:intergenic |
| ACATGGGACGTGGAATTGTA+CGG | 0.502947 | 3.3:-64968098 | MS.gene47597:CDS |
| GTAACCAACTTTGCAACACC+TGG | 0.507072 | 3.3:+64967821 | None:intergenic |
| CCTTCTTGTTGTGTTTAAGG+AGG | 0.516074 | 3.3:+64968737 | None:intergenic |
| TTACAGATGTGTCGTGGTCG+AGG | 0.524433 | 3.3:-64966551 | MS.gene47597:intron |
| TGGCCTGCGAATGCCCCGAC+AGG | 0.524846 | 3.3:-64967938 | MS.gene47597:CDS |
| GTCGATCAGGCTTTAACTCA+AGG | 0.530696 | 3.3:-64967384 | MS.gene47597:CDS |
| GGTGAGTTGCTTAAAATTGG+AGG | 0.532628 | 3.3:-64968077 | MS.gene47597:CDS |
| TGACATATTGCTTCTCAAGA+AGG | 0.536995 | 3.3:+64966205 | None:intergenic |
| ATACTAGCTGCAAGCACTCT+CGG | 0.540283 | 3.3:-64966879 | MS.gene47597:CDS |
| AAACTGTTGCCTCTTCGCCC+AGG | 0.546839 | 3.3:-64967839 | MS.gene47597:CDS |
| ACGGCGTACTTTAACAAGAC+AGG | 0.551081 | 3.3:-64967962 | MS.gene47597:CDS |
| AAAAGCTAAGGCAATGGCCA+TGG | 0.562011 | 3.3:-64968842 | None:intergenic |
| TTGCAGCACTTCCAATGAGA+AGG | 0.567771 | 3.3:-64967346 | MS.gene47597:CDS |
| GAGTTGCTTAAAATTGGAGG+TGG | 0.568390 | 3.3:-64968074 | MS.gene47597:CDS |
| AAGAAGAGCTGAGGGAAGCG+TGG | 0.578519 | 3.3:+64968600 | None:intergenic |
| AGTGTATAGTAACAAAGAGC+GGG | 0.580787 | 3.3:-64966486 | MS.gene47597:intron |
| CCAGATATTTGCAGGAGACG+TGG | 0.583159 | 3.3:-64967078 | MS.gene47597:CDS |
| CGTGGAAGATGCCGAAGCCG+AGG | 0.587987 | 3.3:+64968618 | None:intergenic |
| TAGCAGCAGCTAAAGCAGCT+GGG | 0.588153 | 3.3:-64966513 | MS.gene47597:CDS |
| GCAATAGTATCATGTTTACT+GGG | 0.601679 | 3.3:-64967122 | MS.gene47597:CDS |
| TTTGCAACACCTGGGCGAAG+AGG | 0.605369 | 3.3:+64967830 | None:intergenic |
| AAATTGGAGGTGGAAAAGAA+AGG | 0.610712 | 3.3:-64968064 | MS.gene47597:intron |
| TTTCAATGATACTTTCCAAG+AGG | 0.616411 | 3.3:-64968524 | MS.gene47597:intron |
| TGTTATTTACAGATGTGTCG+TGG | 0.617481 | 3.3:-64966557 | MS.gene47597:intron |
| CCTCCTTAAACACAACAAGA+AGG | 0.618479 | 3.3:-64968737 | MS.gene47597:CDS |
| GCTTTGACAGTGAAAGAGGA+TGG | 0.619633 | 3.3:+64968691 | None:intergenic |
| TCGATTCAACAATGAAGCAG+AGG | 0.624993 | 3.3:+64968792 | None:intergenic |
| AAATCAAATCTCTCCTCGGG+AGG | 0.625449 | 3.3:+64966243 | None:intergenic |
| TATGCTATTTGCTGATGCCA+TGG | 0.626029 | 3.3:+64968825 | None:intergenic |
| AAGTGTATAGTAACAAAGAG+CGG | 0.628437 | 3.3:-64966487 | MS.gene47597:CDS |
| CGTACTTTAACAAGACAGGT+TGG | 0.629835 | 3.3:-64967958 | MS.gene47597:CDS |
| ACTAGGCGTTACATGGGACG+TGG | 0.635683 | 3.3:-64968108 | MS.gene47597:CDS |
| TAACCAACTTTGCAACACCT+GGG | 0.652911 | 3.3:+64967822 | None:intergenic |
| GAAAGAACTAGGCGTTACAT+GGG | 0.654542 | 3.3:-64968114 | MS.gene47597:CDS |
| CTTCATTGGTGATCCTCCCG+AGG | 0.655061 | 3.3:-64966256 | MS.gene47597:CDS |
| TATCATTGAAAGAAATGCGG+TGG | 0.657910 | 3.3:+64968536 | None:intergenic |
| CAGCACTTCCAATGAGAAGG+CGG | 0.658354 | 3.3:-64967343 | MS.gene47597:intron |
| TATCAACTTCAACAACCAGA+AGG | 0.668672 | 3.3:-64968660 | MS.gene47597:CDS |
| CTTCAACAACCAGAAGGCGT+AGG | 0.675480 | 3.3:-64968654 | MS.gene47597:CDS |
| AAGTATCATTGAAAGAAATG+CGG | 0.694645 | 3.3:+64968533 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTAAATATTACTTTTTATTA+TGG | - | chr3.3:64966562-64966581 | MS.gene47597:intron | 10.0% |
| !!! | CTAATTTTCATTATTGAATA+TGG | - | chr3.3:64967341-64967360 | MS.gene47597:intron | 15.0% |
| !!! | GTATATTTCTATTTACTAAA+TGG | - | chr3.3:64968565-64968584 | MS.gene47597:CDS | 15.0% |
| !! | AAACTCATAAAAAATGAGTT+TGG | + | chr3.3:64967259-64967278 | None:intergenic | 20.0% |
| !! | TAGTTGGAAAAATTCATTTA+AGG | + | chr3.3:64967736-64967755 | None:intergenic | 20.0% |
| !! | TTAACTGTAGTATGTAAAAT+GGG | + | chr3.3:64968068-64968087 | None:intergenic | 20.0% |
| !! | TTTAACTGTAGTATGTAAAA+TGG | + | chr3.3:64968069-64968088 | None:intergenic | 20.0% |
| !! | TTTATTCATAACTGCAATAT+TGG | - | chr3.3:64967825-64967844 | MS.gene47597:intron | 20.0% |
| !!! | AAACAATATTAGCCTATTAA+GGG | + | chr3.3:64967482-64967501 | None:intergenic | 20.0% |
| !!! | AATAACTTGCTCTAAAATTT+TGG | + | chr3.3:64968390-64968409 | None:intergenic | 20.0% |
| !!! | TAAACAATATTAGCCTATTA+AGG | + | chr3.3:64967483-64967502 | None:intergenic | 20.0% |
| !!! | TACAACATTTGATTTTATGA+TGG | + | chr3.3:64968322-64968341 | None:intergenic | 20.0% |
| !!! | TCTATGTAATTTTTTTTCGT+AGG | - | chr3.3:64968596-64968615 | MS.gene47597:CDS | 20.0% |
| !!! | TTATTTGATTTTGAACTGTA+TGG | - | chr3.3:64968422-64968441 | MS.gene47597:intron | 20.0% |
| ! | AAAAAATTAGCATTGCAATG+AGG | + | chr3.3:64968010-64968029 | None:intergenic | 25.0% |
| ! | AACATTAATAATTGTTTCCG+AGG | + | chr3.3:64966817-64966836 | None:intergenic | 25.0% |
| ! | AAGAAAGATTAAAAAGCAGA+AGG | + | chr3.3:64966533-64966552 | None:intergenic | 25.0% |
| ! | AAGTATCATTGAAAGAAATG+CGG | + | chr3.3:64966499-64966518 | None:intergenic | 25.0% |
| ! | ATTTATTTGTATTCCATCTC+AGG | - | chr3.3:64967854-64967873 | MS.gene47597:CDS | 25.0% |
| ! | CTTTAAATTACACAAGACAT+TGG | - | chr3.3:64968257-64968276 | MS.gene47597:intron | 25.0% |
| ! | TAAATTACCTACTAAGTAGT+TGG | - | chr3.3:64967436-64967455 | MS.gene47597:intron | 25.0% |
| ! | TACATACTACAGTTAAACAA+TGG | - | chr3.3:64968072-64968091 | MS.gene47597:CDS | 25.0% |
| ! | TTATAAACCAACTACTTAGT+AGG | + | chr3.3:64967446-64967465 | None:intergenic | 25.0% |
| ! | TTTCCAACTATAGAGAAAAA+TGG | - | chr3.3:64967746-64967765 | MS.gene47597:intron | 25.0% |
| !!! | ATAATTGATGCGTTTTTTGT+AGG | - | chr3.3:64967041-64967060 | MS.gene47597:intron | 25.0% |
| !!! | CTAATAAGTGTTGTTGTTTT+TGG | + | chr3.3:64966272-64966291 | None:intergenic | 25.0% |
| !!! | GATTTTATGATGGATACATT+TGG | + | chr3.3:64968312-64968331 | None:intergenic | 25.0% |
| !!! | TAGTGGTTATGTTAGTTTTT+GGG | - | chr3.3:64968636-64968655 | MS.gene47597:CDS | 25.0% |
| !!! | TGCTAATTTTTTAGACTTTC+AGG | - | chr3.3:64968018-64968037 | MS.gene47597:intron | 25.0% |
| !!! | TTAGTGGTTATGTTAGTTTT+TGG | - | chr3.3:64968635-64968654 | MS.gene47597:CDS | 25.0% |
| AAGTGTATAGTAACAAAGAG+CGG | - | chr3.3:64968542-64968561 | MS.gene47597:CDS | 30.0% | |
| ACTATTATGACATACCTTGA+AGG | + | chr3.3:64968183-64968202 | None:intergenic | 30.0% | |
| ATGTGGAAATATCCCTTAAT+AGG | - | chr3.3:64967467-64967486 | MS.gene47597:intron | 30.0% | |
| CAAGAATGAAATCACATTGA+AGG | + | chr3.3:64968688-64968707 | None:intergenic | 30.0% | |
| CAAGACATTGGAAAAGTTAA+TGG | - | chr3.3:64968269-64968288 | MS.gene47597:intron | 30.0% | |
| CACAAAGAGAATAACACAAT+TGG | + | chr3.3:64968117-64968136 | None:intergenic | 30.0% | |
| CACTAGTTAGTTGTTCTAAT+CGG | + | chr3.3:64966707-64966726 | None:intergenic | 30.0% | |
| GCAATAGTATCATGTTTACT+GGG | - | chr3.3:64967907-64967926 | MS.gene47597:CDS | 30.0% | |
| TACATCTAACGTTAGTAATC+AGG | - | chr3.3:64966738-64966757 | MS.gene47597:intron | 30.0% | |
| TCAACAAACAGGTAACTAAT+AGG | + | chr3.3:64967792-64967811 | None:intergenic | 30.0% | |
| TGAAAACTCAAGCTATTAAG+TGG | + | chr3.3:64967318-64967337 | None:intergenic | 30.0% | |
| TGCAATAGTATCATGTTTAC+TGG | - | chr3.3:64967906-64967925 | MS.gene47597:CDS | 30.0% | |
| TTTCAATGATACTTTCCAAG+AGG | - | chr3.3:64966505-64966524 | MS.gene47597:CDS | 30.0% | |
| TTTCTGTCTATCAAACATAC+AGG | - | chr3.3:64967619-64967638 | MS.gene47597:intron | 30.0% | |
| ! | AGTAGTTGGTTTATAACATG+TGG | - | chr3.3:64967450-64967469 | MS.gene47597:intron | 30.0% |
| !!! | AGATTTGATTTGGCATTTTG+TGG | - | chr3.3:64968798-64968817 | MS.gene47597:CDS | 30.0% |
| !!! | TTAGTTTTTGGGATCGAATT+CGG | - | chr3.3:64968647-64968666 | MS.gene47597:CDS | 30.0% |
| AAATTGGAGGTGGAAAAGAA+AGG | - | chr3.3:64966965-64966984 | MS.gene47597:intron | 35.0% | |
| AATATGGTTTCGAAACAGCT+AGG | - | chr3.3:64967357-64967376 | MS.gene47597:CDS | 35.0% | |
| AATTGGCCACATGGTAAAAA+AGG | + | chr3.3:64968100-64968119 | None:intergenic | 35.0% | |
| AGTGTATAGTAACAAAGAGC+GGG | - | chr3.3:64968543-64968562 | MS.gene47597:CDS | 35.0% | |
| ATATGGTTTCGAAACAGCTA+GGG | - | chr3.3:64967358-64967377 | MS.gene47597:CDS | 35.0% | |
| CAGAGATGATAGTAAGTTAG+TGG | - | chr3.3:64968619-64968638 | MS.gene47597:CDS | 35.0% | |
| CTGAAATCAACTCATGACTT+AGG | + | chr3.3:64967881-64967900 | None:intergenic | 35.0% | |
| CTTGTTGACACTGAAAAAGA+TGG | - | chr3.3:64966470-64966489 | MS.gene47597:intron | 35.0% | |
| GCAAAAATCCAGATATTTGC+AGG | - | chr3.3:64967943-64967962 | MS.gene47597:CDS | 35.0% | |
| TACGGTGAGTTGCTTAAAAT+TGG | - | chr3.3:64966949-64966968 | MS.gene47597:intron | 35.0% | |
| TAGTACTCCATGTACTAGTT+AGG | + | chr3.3:64968212-64968231 | None:intergenic | 35.0% | |
| TATCAACTTCAACAACCAGA+AGG | - | chr3.3:64966369-64966388 | MS.gene47597:intron | 35.0% | |
| TATCATTGAAAGAAATGCGG+TGG | + | chr3.3:64966496-64966515 | None:intergenic | 35.0% | |
| TCATATGCCTAACTAGTACA+TGG | - | chr3.3:64968202-64968221 | MS.gene47597:intron | 35.0% | |
| TGAATTGTGCAGAAAGAACT+AGG | - | chr3.3:64966904-64966923 | MS.gene47597:intron | 35.0% | |
| TGACATATTGCTTCTCAAGA+AGG | + | chr3.3:64968827-64968846 | None:intergenic | 35.0% | |
| TGATCTCAAATGTATCATGC+AGG | - | chr3.3:64968706-64968725 | MS.gene47597:CDS | 35.0% | |
| TGCAATGAGGAAAATCTTAC+TGG | + | chr3.3:64967997-64968016 | None:intergenic | 35.0% | |
| ! | GATCCTTCTTGTTGTGTTTA+AGG | + | chr3.3:64966298-64966317 | None:intergenic | 35.0% |
| ! | GATGCTGTATTTGACTTCAT+TGG | - | chr3.3:64968759-64968778 | MS.gene47597:CDS | 35.0% |
| ! | TGTGTTATTCTCTTTGTGAC+AGG | - | chr3.3:64968119-64968138 | MS.gene47597:intron | 35.0% |
| ! | TGTTATTTACAGATGTGTCG+TGG | - | chr3.3:64968472-64968491 | MS.gene47597:intron | 35.0% |
| !! | CTAAGTCATGAGTTGATTTC+AGG | - | chr3.3:64967879-64967898 | MS.gene47597:CDS | 35.0% |
| !! | GATGAAGACATTCTAGTTCT+AGG | + | chr3.3:64966771-64966790 | None:intergenic | 35.0% |
| !!! | ATGCGTTTTTTGTAGGATGA+CGG | - | chr3.3:64967048-64967067 | MS.gene47597:intron | 35.0% |
| !!! | CATCTTTTTCAGTGTCAACA+AGG | + | chr3.3:64966472-64966491 | None:intergenic | 35.0% |
| !!! | GAGCCATTTTTCTCTATAGT+TGG | + | chr3.3:64967752-64967771 | None:intergenic | 35.0% |
| !!! | TAGTTTTTGGGATCGAATTC+GGG | - | chr3.3:64968648-64968667 | MS.gene47597:CDS | 35.0% |
| !!! | TTACTGGATCAGGCTTTTTT+CGG | + | chr3.3:64967981-64968000 | None:intergenic | 35.0% |
| ACACAGCATTGTCAACAAAC+AGG | + | chr3.3:64967803-64967822 | None:intergenic | 40.0% | |
| ACAGTCAAAAAGAAGAGCTG+AGG | + | chr3.3:64966441-64966460 | None:intergenic | 40.0% | |
| AGAAAGAACTAGGCGTTACA+TGG | - | chr3.3:64966914-64966933 | MS.gene47597:intron | 40.0% | |
| CAACAATGAAGCAGAGGAAA+TGG | + | chr3.3:64966234-64966253 | None:intergenic | 40.0% | |
| CAATTCTACAGTTGCTGGAT+AGG | + | chr3.3:64968350-64968369 | None:intergenic | 40.0% | |
| CAGTCAAAAAGAAGAGCTGA+GGG | + | chr3.3:64966440-64966459 | None:intergenic | 40.0% | |
| CCAGCAACTGTAGAATTGTA+TGG | - | chr3.3:64968352-64968371 | MS.gene47597:intron | 40.0% | |
| CCATACAATTCTACAGTTGC+TGG | + | chr3.3:64968355-64968374 | None:intergenic | 40.0% | |
| CCTCCTTAAACACAACAAGA+AGG | - | chr3.3:64966292-64966311 | MS.gene47597:CDS | 40.0% | |
| CGTACTTTAACAAGACAGGT+TGG | - | chr3.3:64967071-64967090 | MS.gene47597:CDS | 40.0% | |
| GAAAGAACTAGGCGTTACAT+GGG | - | chr3.3:64966915-64966934 | MS.gene47597:intron | 40.0% | |
| GAATAACACAATTGGCCACA+TGG | + | chr3.3:64968109-64968128 | None:intergenic | 40.0% | |
| GAGGAAAATCTTACTGGATC+AGG | + | chr3.3:64967991-64968010 | None:intergenic | 40.0% | |
| GAGTTGCTTAAAATTGGAGG+TGG | - | chr3.3:64966955-64966974 | MS.gene47597:intron | 40.0% | |
| GCGAAAGACAGAACTATTCA+TGG | - | chr3.3:64967153-64967172 | MS.gene47597:intron | 40.0% | |
| GCTTGCAGCTAGTATATAGA+TGG | + | chr3.3:64968145-64968164 | None:intergenic | 40.0% | |
| GGTGAGTTGCTTAAAATTGG+AGG | - | chr3.3:64966952-64966971 | MS.gene47597:intron | 40.0% | |
| TAACCAACTTTGCAACACCT+GGG | + | chr3.3:64967210-64967229 | None:intergenic | 40.0% | |
| TAATAATTGTTTCCGAGGCG+TGG | + | chr3.3:64966812-64966831 | None:intergenic | 40.0% | |
| TATGGTTTCGAAACAGCTAG+GGG | - | chr3.3:64967359-64967378 | MS.gene47597:CDS | 40.0% | |
| TCGATTCAACAATGAAGCAG+AGG | + | chr3.3:64966240-64966259 | None:intergenic | 40.0% | |
| TGCCAAATCAAATCTCTCCT+CGG | + | chr3.3:64968793-64968812 | None:intergenic | 40.0% | |
| TTCCTTTCTTGTTCACCTGT+CGG | + | chr3.3:64967109-64967128 | None:intergenic | 40.0% | |
| ! | AAGAGCTTTGACAGTGAAAG+AGG | + | chr3.3:64966345-64966364 | None:intergenic | 40.0% |
| ! | CCTTCTTGTTGTGTTTAAGG+AGG | + | chr3.3:64966295-64966314 | None:intergenic | 40.0% |
| ! | GAGTCGTTGATTACATAGAG+TGG | - | chr3.3:64966663-64966682 | MS.gene47597:intron | 40.0% |
| ! | TATGCTATTTGCTGATGCCA+TGG | + | chr3.3:64966207-64966226 | None:intergenic | 40.0% |
| !! | GCTCTTCTTTTTGACTGTGA+TGG | - | chr3.3:64966443-64966462 | MS.gene47597:intron | 40.0% |
| !!! | ATGGAGCCTTTTTTACCATG+TGG | - | chr3.3:64968091-64968110 | MS.gene47597:CDS | 40.0% |
| !!! | TACTGGATCAGGCTTTTTTC+GGG | + | chr3.3:64967980-64967999 | None:intergenic | 40.0% |
| AAATCAAATCTCTCCTCGGG+AGG | + | chr3.3:64968789-64968808 | None:intergenic | 45.0% | |
| AACATACAGGCTTGTCGATC+AGG | - | chr3.3:64967632-64967651 | MS.gene47597:intron | 45.0% | |
| ACATGGGACGTGGAATTGTA+CGG | - | chr3.3:64966931-64966950 | MS.gene47597:intron | 45.0% | |
| ACGGCGTACTTTAACAAGAC+AGG | - | chr3.3:64967067-64967086 | MS.gene47597:CDS | 45.0% | |
| ATACTAGCTGCAAGCACTCT+CGG | - | chr3.3:64968150-64968169 | MS.gene47597:intron | 45.0% | |
| GCCAAATCAAATCTCTCCTC+GGG | + | chr3.3:64968792-64968811 | None:intergenic | 45.0% | |
| GCTTTGACAGTGAAAGAGGA+TGG | + | chr3.3:64966341-64966360 | None:intergenic | 45.0% | |
| GTAACCAACTTTGCAACACC+TGG | + | chr3.3:64967211-64967230 | None:intergenic | 45.0% | |
| TATGCATACCGCCTTCTCAT+TGG | + | chr3.3:64967697-64967716 | None:intergenic | 45.0% | |
| TCATGACTTAGGTCCTGAGA+TGG | + | chr3.3:64967870-64967889 | None:intergenic | 45.0% | |
| TCCCGAGGAGAGATTTGATT+TGG | - | chr3.3:64968788-64968807 | MS.gene47597:CDS | 45.0% | |
| TCCTTTCTTGTTCACCTGTC+GGG | + | chr3.3:64967108-64967127 | None:intergenic | 45.0% | |
| TTGCAGCACTTCCAATGAGA+AGG | - | chr3.3:64967683-64967702 | MS.gene47597:intron | 45.0% | |
| ! | GTCGATCAGGCTTTAACTCA+AGG | - | chr3.3:64967645-64967664 | MS.gene47597:intron | 45.0% |
| !! | AAAAAGCAGAAGGCACCTCT+TGG | + | chr3.3:64966523-64966542 | None:intergenic | 45.0% |
| !!! | ACTGGATCAGGCTTTTTTCG+GGG | + | chr3.3:64967979-64967998 | None:intergenic | 45.0% |
| CAGCACTTCCAATGAGAAGG+CGG | - | chr3.3:64967686-64967705 | MS.gene47597:intron | 50.0% | |
| CCACGTCTCCTGCAAATATC+TGG | + | chr3.3:64967954-64967973 | None:intergenic | 50.0% | |
| CCAGATATTTGCAGGAGACG+TGG | - | chr3.3:64967951-64967970 | MS.gene47597:CDS | 50.0% | |
| CCTTTCTTGTTCACCTGTCG+GGG | + | chr3.3:64967107-64967126 | None:intergenic | 50.0% | |
| TAGCAGCAGCTAAAGCAGCT+GGG | - | chr3.3:64968516-64968535 | MS.gene47597:intron | 50.0% | |
| TTACAGATGTGTCGTGGTCG+AGG | - | chr3.3:64968478-64968497 | MS.gene47597:intron | 50.0% | |
| ! | CTTCAACAACCAGAAGGCGT+AGG | - | chr3.3:64966375-64966394 | MS.gene47597:intron | 50.0% |
| ! | TAGGTTGAGTTGCTCAGCCT+CGG | - | chr3.3:64966394-64966413 | MS.gene47597:intron | 50.0% |
| ! | TGGATTTTTGCTGCTCGCTC+AGG | + | chr3.3:64967934-64967953 | None:intergenic | 50.0% |
| !! | CTCTCGGTGTTGAACCTTCA+AGG | - | chr3.3:64968166-64968185 | MS.gene47597:intron | 50.0% |
| AAACTGTTGCCTCTTCGCCC+AGG | - | chr3.3:64967190-64967209 | MS.gene47597:intron | 55.0% | |
| AAGAAGAGCTGAGGGAAGCG+TGG | + | chr3.3:64966432-64966451 | None:intergenic | 55.0% | |
| ACTAGGCGTTACATGGGACG+TGG | - | chr3.3:64966921-64966940 | MS.gene47597:intron | 55.0% | |
| CCCCGACAGGTGAACAAGAA+AGG | - | chr3.3:64967104-64967123 | MS.gene47597:CDS | 55.0% | |
| CTAGCAGCAGCTAAAGCAGC+TGG | - | chr3.3:64968515-64968534 | MS.gene47597:intron | 55.0% | |
| GCAACTCAACCTACGCCTTC+TGG | + | chr3.3:64966387-64966406 | None:intergenic | 55.0% | |
| GTGGTCGAGGACAGTGCAAT+AGG | - | chr3.3:64968491-64968510 | MS.gene47597:intron | 55.0% | |
| TTTGCAACACCTGGGCGAAG+AGG | + | chr3.3:64967202-64967221 | None:intergenic | 55.0% | |
| ! | CTTCATTGGTGATCCTCCCG+AGG | - | chr3.3:64968773-64968792 | MS.gene47597:CDS | 55.0% |
| ! | TCGCCCAGGTGTTGCAAAGT+TGG | - | chr3.3:64967204-64967223 | MS.gene47597:intron | 55.0% |
| GAGTTGCTCAGCCTCGGCTT+CGG | - | chr3.3:64966400-64966419 | MS.gene47597:intron | 60.0% | |
| GTGGCTCAGGTGGTTGAGGT+AGG | + | chr3.3:64966793-64966812 | None:intergenic | 60.0% | |
| TTGTTTCCGAGGCGTGGCTC+AGG | + | chr3.3:64966806-64966825 | None:intergenic | 60.0% | |
| AGGCGTGGCTCAGGTGGTTG+AGG | + | chr3.3:64966797-64966816 | None:intergenic | 65.0% | |
| CAACCACCTGAGCCACGCCT+CGG | - | chr3.3:64966797-64966816 | MS.gene47597:intron | 65.0% | |
| CGTGGAAGATGCCGAAGCCG+AGG | + | chr3.3:64966414-64966433 | None:intergenic | 65.0% | |
| TTTCCGAGGCGTGGCTCAGG+TGG | + | chr3.3:64966803-64966822 | None:intergenic | 65.0% | |
| ! | TCACCTGTCGGGGCATTCGC+AGG | + | chr3.3:64967097-64967116 | None:intergenic | 65.0% |
| TGGCCTGCGAATGCCCCGAC+AGG | - | chr3.3:64967091-64967110 | MS.gene47597:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 64966200 | 64968851 | 64966200 | ID=MS.gene47597 |
| chr3.3 | mRNA | 64966200 | 64968851 | 64966200 | ID=MS.gene47597.t1;Parent=MS.gene47597 |
| chr3.3 | exon | 64968525 | 64968851 | 64968525 | ID=MS.gene47597.t1.exon1;Parent=MS.gene47597.t1 |
| chr3.3 | CDS | 64968525 | 64968851 | 64968525 | ID=cds.MS.gene47597.t1;Parent=MS.gene47597.t1 |
| chr3.3 | exon | 64968065 | 64968135 | 64968065 | ID=MS.gene47597.t1.exon2;Parent=MS.gene47597.t1 |
| chr3.3 | CDS | 64968065 | 64968135 | 64968065 | ID=cds.MS.gene47597.t1;Parent=MS.gene47597.t1 |
| chr3.3 | exon | 64967830 | 64967988 | 64967830 | ID=MS.gene47597.t1.exon3;Parent=MS.gene47597.t1 |
| chr3.3 | CDS | 64967830 | 64967988 | 64967830 | ID=cds.MS.gene47597.t1;Parent=MS.gene47597.t1 |
| chr3.3 | exon | 64967344 | 64967410 | 64967344 | ID=MS.gene47597.t1.exon4;Parent=MS.gene47597.t1 |
| chr3.3 | CDS | 64967344 | 64967410 | 64967344 | ID=cds.MS.gene47597.t1;Parent=MS.gene47597.t1 |
| chr3.3 | exon | 64967055 | 64967150 | 64967055 | ID=MS.gene47597.t1.exon5;Parent=MS.gene47597.t1 |
| chr3.3 | CDS | 64967055 | 64967150 | 64967055 | ID=cds.MS.gene47597.t1;Parent=MS.gene47597.t1 |
| chr3.3 | exon | 64966864 | 64966910 | 64966864 | ID=MS.gene47597.t1.exon6;Parent=MS.gene47597.t1 |
| chr3.3 | CDS | 64966864 | 64966910 | 64966864 | ID=cds.MS.gene47597.t1;Parent=MS.gene47597.t1 |
| chr3.3 | exon | 64966487 | 64966567 | 64966487 | ID=MS.gene47597.t1.exon7;Parent=MS.gene47597.t1 |
| chr3.3 | CDS | 64966487 | 64966567 | 64966487 | ID=cds.MS.gene47597.t1;Parent=MS.gene47597.t1 |
| chr3.3 | exon | 64966200 | 64966323 | 64966200 | ID=MS.gene47597.t1.exon8;Parent=MS.gene47597.t1 |
| chr3.3 | CDS | 64966200 | 64966323 | 64966200 | ID=cds.MS.gene47597.t1;Parent=MS.gene47597.t1 |
| Gene Sequence |
| Protein sequence |
