Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61944.t1 | XP_003615394.1 | 99.3 | 542 | 4 | 0 | 1 | 542 | 1 | 542 | 1.90E-288 | 1001.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61944.t1 | P93111 | 77.9 | 551 | 108 | 5 | 1 | 539 | 1 | 549 | 2.5e-228 | 792.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61944.t1 | B7FLG0 | 99.3 | 542 | 4 | 0 | 1 | 542 | 1 | 542 | 1.4e-288 | 1001.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049173 | MS.gene61944 | 0.813586 | 2.38E-51 | -1.69E-46 |
| MS.gene049217 | MS.gene61944 | 0.836413 | 9.50E-57 | -1.69E-46 |
| MS.gene049222 | MS.gene61944 | 0.804187 | 2.44E-49 | -1.69E-46 |
| MS.gene049285 | MS.gene61944 | 0.82267 | 2.09E-53 | -1.69E-46 |
| MS.gene049320 | MS.gene61944 | 0.84104 | 6.05E-58 | -1.69E-46 |
| MS.gene049356 | MS.gene61944 | 0.838271 | 3.18E-57 | -1.69E-46 |
| MS.gene049369 | MS.gene61944 | 0.881313 | 2.66E-70 | -1.69E-46 |
| MS.gene049427 | MS.gene61944 | 0.818919 | 1.52E-52 | -1.69E-46 |
| MS.gene049609 | MS.gene61944 | 0.823509 | 1.33E-53 | -1.69E-46 |
| MS.gene049661 | MS.gene61944 | 0.848619 | 5.46E-60 | -1.69E-46 |
| MS.gene049662 | MS.gene61944 | 0.834377 | 3.10E-56 | -1.69E-46 |
| MS.gene049805 | MS.gene61944 | 0.830377 | 3.04E-55 | -1.69E-46 |
| MS.gene049828 | MS.gene61944 | 0.837574 | 4.80E-57 | -1.69E-46 |
| MS.gene049907 | MS.gene61944 | 0.824533 | 7.67E-54 | -1.69E-46 |
| MS.gene050076 | MS.gene61944 | 0.804933 | 1.70E-49 | -1.69E-46 |
| MS.gene050163 | MS.gene61944 | 0.809395 | 1.93E-50 | -1.69E-46 |
| MS.gene050333 | MS.gene61944 | 0.830087 | 3.58E-55 | -1.69E-46 |
| MS.gene050432 | MS.gene61944 | 0.866547 | 2.63E-65 | -1.69E-46 |
| MS.gene050520 | MS.gene61944 | 0.824021 | 1.01E-53 | -1.69E-46 |
| MS.gene050662 | MS.gene61944 | 0.802511 | 5.42E-49 | -1.69E-46 |
| MS.gene050686 | MS.gene61944 | 0.854481 | 1.20E-61 | -1.69E-46 |
| MS.gene050767 | MS.gene61944 | 0.884246 | 2.26E-71 | -1.69E-46 |
| MS.gene050770 | MS.gene61944 | 0.884716 | 1.51E-71 | -1.69E-46 |
| MS.gene050772 | MS.gene61944 | 0.867813 | 1.04E-65 | -1.69E-46 |
| MS.gene05100 | MS.gene61944 | 0.800262 | 1.57E-48 | -1.69E-46 |
| MS.gene05101 | MS.gene61944 | 0.801292 | 9.65E-49 | -1.69E-46 |
| MS.gene05105 | MS.gene61944 | 0.8243 | 8.70E-54 | -1.69E-46 |
| MS.gene051228 | MS.gene61944 | 0.871828 | 5.07E-67 | -1.69E-46 |
| MS.gene051255 | MS.gene61944 | 0.812869 | 3.41E-51 | -1.69E-46 |
| MS.gene051509 | MS.gene61944 | 0.827666 | 1.38E-54 | -1.69E-46 |
| MS.gene051666 | MS.gene61944 | 0.821949 | 3.08E-53 | -1.69E-46 |
| MS.gene051692 | MS.gene61944 | 0.872148 | 3.97E-67 | -1.69E-46 |
| MS.gene051810 | MS.gene61944 | 0.842097 | 3.18E-58 | -1.69E-46 |
| MS.gene051858 | MS.gene61944 | 0.846155 | 2.59E-59 | -1.69E-46 |
| MS.gene051877 | MS.gene61944 | 0.81425 | 1.70E-51 | -1.69E-46 |
| MS.gene052078 | MS.gene61944 | 0.805269 | 1.45E-49 | -1.69E-46 |
| MS.gene052271 | MS.gene61944 | 0.869366 | 3.27E-66 | -1.69E-46 |
| MS.gene052290 | MS.gene61944 | 0.844355 | 7.96E-59 | -1.69E-46 |
| MS.gene052310 | MS.gene61944 | 0.811671 | 6.23E-51 | -1.69E-46 |
| MS.gene052322 | MS.gene61944 | 0.814237 | 1.71E-51 | -1.69E-46 |
| MS.gene052379 | MS.gene61944 | 0.836013 | 1.20E-56 | -1.69E-46 |
| MS.gene052421 | MS.gene61944 | 0.810466 | 1.14E-50 | -1.69E-46 |
| MS.gene052484 | MS.gene61944 | 0.814514 | 1.48E-51 | -1.69E-46 |
| MS.gene052485 | MS.gene61944 | 0.808915 | 2.45E-50 | -1.69E-46 |
| MS.gene052508 | MS.gene61944 | 0.813059 | 3.10E-51 | -1.69E-46 |
| MS.gene052510 | MS.gene61944 | 0.819059 | 1.42E-52 | -1.69E-46 |
| MS.gene052916 | MS.gene61944 | 0.829978 | 3.80E-55 | -1.69E-46 |
| MS.gene053009 | MS.gene61944 | 0.867667 | 1.16E-65 | -1.69E-46 |
| MS.gene053018 | MS.gene61944 | 0.83099 | 2.15E-55 | -1.69E-46 |
| MS.gene053103 | MS.gene61944 | 0.820076 | 8.30E-53 | -1.69E-46 |
| MS.gene053104 | MS.gene61944 | 0.836908 | 7.10E-57 | -1.69E-46 |
| MS.gene053207 | MS.gene61944 | 0.838256 | 3.20E-57 | -1.69E-46 |
| MS.gene053209 | MS.gene61944 | 0.825234 | 5.24E-54 | -1.69E-46 |
| MS.gene053213 | MS.gene61944 | 0.843466 | 1.38E-58 | -1.69E-46 |
| MS.gene053286 | MS.gene61944 | 0.836918 | 7.06E-57 | -1.69E-46 |
| MS.gene053322 | MS.gene61944 | 0.847041 | 1.49E-59 | -1.69E-46 |
| MS.gene053384 | MS.gene61944 | 0.83764 | 4.61E-57 | -1.69E-46 |
| MS.gene053449 | MS.gene61944 | 0.848136 | 7.43E-60 | -1.69E-46 |
| MS.gene053574 | MS.gene61944 | 0.825271 | 5.13E-54 | -1.69E-46 |
| MS.gene053632 | MS.gene61944 | 0.826875 | 2.13E-54 | -1.69E-46 |
| MS.gene053813 | MS.gene61944 | 0.873113 | 1.89E-67 | -1.69E-46 |
| MS.gene053912 | MS.gene61944 | 0.817028 | 4.08E-52 | -1.69E-46 |
| MS.gene053916 | MS.gene61944 | 0.854777 | 9.82E-62 | -1.69E-46 |
| MS.gene054376 | MS.gene61944 | 0.86825 | 7.51E-66 | -1.69E-46 |
| MS.gene054600 | MS.gene61944 | 0.820826 | 5.59E-53 | -1.69E-46 |
| MS.gene054642 | MS.gene61944 | 0.850392 | 1.75E-60 | -1.69E-46 |
| MS.gene054802 | MS.gene61944 | 0.848439 | 6.13E-60 | -1.69E-46 |
| MS.gene054803 | MS.gene61944 | 0.849295 | 3.54E-60 | -1.69E-46 |
| MS.gene054804 | MS.gene61944 | 0.852174 | 5.49E-61 | -1.69E-46 |
| MS.gene05505 | MS.gene61944 | 0.853707 | 2.00E-61 | -1.69E-46 |
| MS.gene055206 | MS.gene61944 | 0.806425 | 8.28E-50 | -1.69E-46 |
| MS.gene055212 | MS.gene61944 | 0.821346 | 4.24E-53 | -1.69E-46 |
| MS.gene055254 | MS.gene61944 | 0.880679 | 4.50E-70 | -1.69E-46 |
| MS.gene055277 | MS.gene61944 | 0.81679 | 4.61E-52 | -1.69E-46 |
| MS.gene055362 | MS.gene61944 | 0.826422 | 2.74E-54 | -1.69E-46 |
| MS.gene055397 | MS.gene61944 | 0.872665 | 2.67E-67 | -1.69E-46 |
| MS.gene055499 | MS.gene61944 | 0.851269 | 9.91E-61 | -1.69E-46 |
| MS.gene055636 | MS.gene61944 | 0.847205 | 1.34E-59 | -1.69E-46 |
| MS.gene055638 | MS.gene61944 | 0.837101 | 6.34E-57 | -1.69E-46 |
| MS.gene055647 | MS.gene61944 | 0.843894 | 1.06E-58 | -1.69E-46 |
| MS.gene055722 | MS.gene61944 | 0.890556 | 8.85E-74 | -1.69E-46 |
| MS.gene055802 | MS.gene61944 | 0.81997 | 8.78E-53 | -1.69E-46 |
| MS.gene05592 | MS.gene61944 | 0.881178 | 2.98E-70 | -1.69E-46 |
| MS.gene056083 | MS.gene61944 | 0.807366 | 5.24E-50 | -1.69E-46 |
| MS.gene056191 | MS.gene61944 | 0.802226 | 6.20E-49 | -1.69E-46 |
| MS.gene056374 | MS.gene61944 | 0.853818 | 1.86E-61 | -1.69E-46 |
| MS.gene056410 | MS.gene61944 | 0.837559 | 4.84E-57 | -1.69E-46 |
| MS.gene056422 | MS.gene61944 | 0.828752 | 7.55E-55 | -1.69E-46 |
| MS.gene056448 | MS.gene61944 | 0.806208 | 9.20E-50 | -1.69E-46 |
| MS.gene056487 | MS.gene61944 | 0.847684 | 9.90E-60 | -1.69E-46 |
| MS.gene056511 | MS.gene61944 | 0.827865 | 1.24E-54 | -1.69E-46 |
| MS.gene056549 | MS.gene61944 | 0.812892 | 3.37E-51 | -1.69E-46 |
| MS.gene056609 | MS.gene61944 | 0.855789 | 4.98E-62 | -1.69E-46 |
| MS.gene056611 | MS.gene61944 | 0.816312 | 5.90E-52 | -1.69E-46 |
| MS.gene05664 | MS.gene61944 | 0.815582 | 8.59E-52 | -1.69E-46 |
| MS.gene056657 | MS.gene61944 | 0.844257 | 8.46E-59 | -1.69E-46 |
| MS.gene05666 | MS.gene61944 | 0.80453 | 2.07E-49 | -1.69E-46 |
| MS.gene056897 | MS.gene61944 | 0.807558 | 4.77E-50 | -1.69E-46 |
| MS.gene056942 | MS.gene61944 | 0.818503 | 1.89E-52 | -1.69E-46 |
| MS.gene057076 | MS.gene61944 | 0.810496 | 1.12E-50 | -1.69E-46 |
| MS.gene057129 | MS.gene61944 | 0.882082 | 1.40E-70 | -1.69E-46 |
| MS.gene057146 | MS.gene61944 | 0.831966 | 1.24E-55 | -1.69E-46 |
| MS.gene057285 | MS.gene61944 | 0.828086 | 1.09E-54 | -1.69E-46 |
| MS.gene057295 | MS.gene61944 | 0.824087 | 9.76E-54 | -1.69E-46 |
| MS.gene057331 | MS.gene61944 | 0.845611 | 3.64E-59 | -1.69E-46 |
| MS.gene05735 | MS.gene61944 | 0.839631 | 1.41E-57 | -1.69E-46 |
| MS.gene057416 | MS.gene61944 | 0.848368 | 6.41E-60 | -1.69E-46 |
| MS.gene057734 | MS.gene61944 | 0.833547 | 5.01E-56 | -1.69E-46 |
| MS.gene057926 | MS.gene61944 | 0.87159 | 6.09E-67 | -1.69E-46 |
| MS.gene058006 | MS.gene61944 | 0.823995 | 1.03E-53 | -1.69E-46 |
| MS.gene058019 | MS.gene61944 | 0.819926 | 8.99E-53 | -1.69E-46 |
| MS.gene058293 | MS.gene61944 | 0.818876 | 1.56E-52 | -1.69E-46 |
| MS.gene058323 | MS.gene61944 | 0.828233 | 1.01E-54 | -1.69E-46 |
| MS.gene058419 | MS.gene61944 | 0.829074 | 6.31E-55 | -1.69E-46 |
| MS.gene058459 | MS.gene61944 | 0.861527 | 9.64E-64 | -1.69E-46 |
| MS.gene058660 | MS.gene61944 | 0.832456 | 9.35E-56 | -1.69E-46 |
| MS.gene058723 | MS.gene61944 | 0.862271 | 5.70E-64 | -1.69E-46 |
| MS.gene058773 | MS.gene61944 | 0.820238 | 7.62E-53 | -1.69E-46 |
| MS.gene058840 | MS.gene61944 | -0.80752 | 4.86E-50 | -1.69E-46 |
| MS.gene058903 | MS.gene61944 | 0.831351 | 1.75E-55 | -1.69E-46 |
| MS.gene058928 | MS.gene61944 | 0.820679 | 6.04E-53 | -1.69E-46 |
| MS.gene059022 | MS.gene61944 | 0.804918 | 1.72E-49 | -1.69E-46 |
| MS.gene059029 | MS.gene61944 | 0.821059 | 4.94E-53 | -1.69E-46 |
| MS.gene05913 | MS.gene61944 | 0.837267 | 5.75E-57 | -1.69E-46 |
| MS.gene05934 | MS.gene61944 | 0.800558 | 1.36E-48 | -1.69E-46 |
| MS.gene059366 | MS.gene61944 | 0.800287 | 1.55E-48 | -1.69E-46 |
| MS.gene059367 | MS.gene61944 | 0.814027 | 1.90E-51 | -1.69E-46 |
| MS.gene059368 | MS.gene61944 | 0.820223 | 7.68E-53 | -1.69E-46 |
| MS.gene059536 | MS.gene61944 | 0.837477 | 5.08E-57 | -1.69E-46 |
| MS.gene059674 | MS.gene61944 | 0.806514 | 7.93E-50 | -1.69E-46 |
| MS.gene059676 | MS.gene61944 | 0.81075 | 9.87E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene61944 | 0.807236 | 5.58E-50 | -1.69E-46 |
| MS.gene059688 | MS.gene61944 | 0.823186 | 1.59E-53 | -1.69E-46 |
| MS.gene059692 | MS.gene61944 | 0.823733 | 1.18E-53 | -1.69E-46 |
| MS.gene059695 | MS.gene61944 | 0.816904 | 4.35E-52 | -1.69E-46 |
| MS.gene059711 | MS.gene61944 | 0.880318 | 6.06E-70 | -1.69E-46 |
| MS.gene059718 | MS.gene61944 | 0.828695 | 7.79E-55 | -1.69E-46 |
| MS.gene059807 | MS.gene61944 | 0.800807 | 1.21E-48 | -1.69E-46 |
| MS.gene05986 | MS.gene61944 | 0.848152 | 7.35E-60 | -1.69E-46 |
| MS.gene059902 | MS.gene61944 | 0.841125 | 5.74E-58 | -1.69E-46 |
| MS.gene059960 | MS.gene61944 | 0.848069 | 7.75E-60 | -1.69E-46 |
| MS.gene059974 | MS.gene61944 | 0.834625 | 2.69E-56 | -1.69E-46 |
| MS.gene060005 | MS.gene61944 | 0.812644 | 3.82E-51 | -1.69E-46 |
| MS.gene060193 | MS.gene61944 | 0.840454 | 8.61E-58 | -1.69E-46 |
| MS.gene060356 | MS.gene61944 | 0.840976 | 6.28E-58 | -1.69E-46 |
| MS.gene06037 | MS.gene61944 | 0.821307 | 4.33E-53 | -1.69E-46 |
| MS.gene060482 | MS.gene61944 | 0.837464 | 5.12E-57 | -1.69E-46 |
| MS.gene060727 | MS.gene61944 | 0.804138 | 2.49E-49 | -1.69E-46 |
| MS.gene060804 | MS.gene61944 | 0.862295 | 5.61E-64 | -1.69E-46 |
| MS.gene060818 | MS.gene61944 | 0.88081 | 4.04E-70 | -1.69E-46 |
| MS.gene060835 | MS.gene61944 | 0.802083 | 6.64E-49 | -1.69E-46 |
| MS.gene060837 | MS.gene61944 | 0.86079 | 1.62E-63 | -1.69E-46 |
| MS.gene061041 | MS.gene61944 | 0.8692 | 3.70E-66 | -1.69E-46 |
| MS.gene061051 | MS.gene61944 | -0.824289 | 8.75E-54 | -1.69E-46 |
| MS.gene061134 | MS.gene61944 | 0.854486 | 1.19E-61 | -1.69E-46 |
| MS.gene061200 | MS.gene61944 | 0.889279 | 2.79E-73 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61944.t1 | MTR_5g067410 | 99.262 | 542 | 4 | 0 | 1 | 542 | 1 | 542 | 0.0 | 1108 |
| MS.gene61944.t1 | MTR_3g111190 | 80.334 | 539 | 95 | 4 | 1 | 539 | 1 | 528 | 0.0 | 885 |
| MS.gene61944.t1 | MTR_3g111190 | 86.374 | 433 | 58 | 1 | 107 | 539 | 1 | 432 | 0.0 | 780 |
| MS.gene61944.t1 | MTR_4g092820 | 64.829 | 526 | 174 | 5 | 21 | 539 | 5 | 526 | 0.0 | 655 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61944.t1 | AT1G58290 | 82.189 | 466 | 80 | 2 | 75 | 540 | 79 | 541 | 0.0 | 788 |
| MS.gene61944.t1 | AT1G09940 | 71.429 | 546 | 134 | 7 | 1 | 540 | 1 | 530 | 0.0 | 768 |
| MS.gene61944.t1 | AT2G31250 | 64.516 | 465 | 151 | 6 | 80 | 540 | 70 | 524 | 0.0 | 584 |
Find 102 sgRNAs with CRISPR-Local
Find 147 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAGAAATGTTTAGGTAAAA+TGG | 0.148078 | 5.2:-57367102 | MS.gene61944:CDS |
| AAGATGAAGAACAGCATTTA+AGG | 0.165585 | 5.2:+57369455 | None:intergenic |
| TTCCAACCATTAAGAAATTA+AGG | 0.165771 | 5.2:-57367157 | MS.gene61944:CDS |
| CGCTTCATCTTCTGATGTTT+TGG | 0.184621 | 5.2:-57369338 | MS.gene61944:CDS |
| ACGCAATCACCGTCGGTAAA+AGG | 0.192964 | 5.2:-57367775 | MS.gene61944:CDS |
| ATAAGCCCTTAATTTCTTAA+TGG | 0.214661 | 5.2:+57367151 | None:intergenic |
| TGAAACTGAGGTTTCTGTTT+TGG | 0.219895 | 5.2:-57366910 | MS.gene61944:CDS |
| GGGCTTATGCTGAAAGATTA+AGG | 0.231515 | 5.2:-57367136 | MS.gene61944:CDS |
| TAGTTTCTATGGTGCTAAAT+TGG | 0.244077 | 5.2:-57369488 | MS.gene61944:CDS |
| AGGAGCAGCATTGTCGTTAT+TGG | 0.244642 | 5.2:-57368648 | MS.gene61944:CDS |
| ACACATGAACCTACGTTTCT+AGG | 0.249945 | 5.2:+57367338 | None:intergenic |
| GCTGTTTCAACTAGTTTCTA+TGG | 0.301919 | 5.2:-57369499 | MS.gene61944:CDS |
| GCTGAACTTGAGAAATGTTT+AGG | 0.304091 | 5.2:-57367110 | MS.gene61944:CDS |
| GCTCTAGGCCATTCTGCTTC+TGG | 0.309364 | 5.2:+57368576 | None:intergenic |
| TCTTAGCCTGTCCTCTTTGT+TGG | 0.319230 | 5.2:+57367256 | None:intergenic |
| AGTTATTGGAGCTGGCAAAA+TGG | 0.324891 | 5.2:-57367639 | MS.gene61944:CDS |
| TCCTTTAGCAAGCGAAGAAA+TGG | 0.328100 | 5.2:-57367393 | MS.gene61944:CDS |
| ATATATCTCCATTCGGTTGC+AGG | 0.334402 | 5.2:+57368500 | None:intergenic |
| GTTATTGGAGCTGGCAAAAT+GGG | 0.335933 | 5.2:-57367638 | MS.gene61944:CDS |
| AAAGCAGGACAAGGAGTTAA+TGG | 0.352248 | 5.2:-57367830 | MS.gene61944:CDS |
| TCCAACCATTAAGAAATTAA+GGG | 0.367076 | 5.2:-57367156 | MS.gene61944:CDS |
| GGAGCAGCATTGTCGTTATT+GGG | 0.368509 | 5.2:-57368647 | MS.gene61944:CDS |
| GATAATTTACAAACCCCTTT+CGG | 0.370528 | 5.2:-57367507 | MS.gene61944:CDS |
| GAGAAATGTTTAGGTAAAAT+GGG | 0.376514 | 5.2:-57367101 | MS.gene61944:CDS |
| AATGCAAGAATGCTAGTTAT+TGG | 0.382486 | 5.2:-57367653 | MS.gene61944:CDS |
| CAACATCATTTATTTCTTCA+CGG | 0.384102 | 5.2:+57367531 | None:intergenic |
| CGATGATCTTGAGTCTGTTA+AGG | 0.386630 | 5.2:-57367315 | MS.gene61944:CDS |
| GGTCTTGATTCTCTTGTAAT+GGG | 0.391946 | 5.2:-57367890 | MS.gene61944:CDS |
| GACCTGCTGATACTTCAAAA+AGG | 0.396196 | 5.2:+57367909 | None:intergenic |
| GGCTTATGCTGAAAGATTAA+GGG | 0.398014 | 5.2:-57367135 | MS.gene61944:CDS |
| GCCCTTAATTTCTTAATGGT+TGG | 0.403046 | 5.2:+57367155 | None:intergenic |
| GGACAAGGAGTTAATGGCTT+TGG | 0.405221 | 5.2:-57367824 | MS.gene61944:CDS |
| AGGTCTTGATTCTCTTGTAA+TGG | 0.410658 | 5.2:-57367891 | MS.gene61944:CDS |
| ATCAAACATTTGGTTGCAAA+AGG | 0.420709 | 5.2:-57367605 | MS.gene61944:CDS |
| GGTGATCATCGGCGAAGAAT+CGG | 0.423290 | 5.2:-57367216 | MS.gene61944:CDS |
| GAAGCTTGTGATCAAACATT+TGG | 0.426546 | 5.2:-57367615 | MS.gene61944:CDS |
| TCGGAAATGCTCGAATGTAT+TGG | 0.438087 | 5.2:-57367488 | MS.gene61944:CDS |
| CCCATTTCTTCGCTTGCTAA+AGG | 0.439472 | 5.2:+57367392 | None:intergenic |
| CGCAATCACCGTCGGTAAAA+GGG | 0.440824 | 5.2:-57367774 | MS.gene61944:CDS |
| AGCTGTGGATGATCTTAGTA+AGG | 0.441939 | 5.2:-57367051 | MS.gene61944:CDS |
| AATCGGGACAATTTGAAGCT+TGG | 0.456577 | 5.2:-57367199 | MS.gene61944:CDS |
| AGGCCATTCTGCTTCTGGTA+TGG | 0.459415 | 5.2:+57368581 | None:intergenic |
| GTGATCATCGGCGAAGAATC+GGG | 0.471676 | 5.2:-57367215 | MS.gene61944:CDS |
| CAATGTTGATGATCTTAAAG+AGG | 0.478016 | 5.2:-57367288 | MS.gene61944:CDS |
| TAAATGAGTAGTAACATAAG+AGG | 0.481033 | 5.2:+57369420 | None:intergenic |
| ATTGTGAATAAAATGCTTCA+TGG | 0.487727 | 5.2:-57367026 | MS.gene61944:CDS |
| ACATTCGAGCATTTCCGAAA+GGG | 0.488912 | 5.2:+57367493 | None:intergenic |
| CAAAGCTCACCAATGGCTCT+AGG | 0.509555 | 5.2:+57368561 | None:intergenic |
| CCTTTAGCAAGCGAAGAAAT+GGG | 0.509769 | 5.2:-57367392 | MS.gene61944:CDS |
| GCAGAATGGCCTAGAGCCAT+TGG | 0.516082 | 5.2:-57368570 | MS.gene61944:CDS |
| GATTCTCTTGTAATGGGAGA+AGG | 0.520460 | 5.2:-57367884 | MS.gene61944:CDS |
| TACTTTGACAGCTCTGATGC+AGG | 0.523941 | 5.2:+57367968 | None:intergenic |
| CATTCTTGCATTGCCATGTG+AGG | 0.524732 | 5.2:+57367664 | None:intergenic |
| TTGCCATGTGAGGCTTGATC+AGG | 0.526089 | 5.2:+57367674 | None:intergenic |
| AAGAGCTTTGTTCAAAGCAG+AGG | 0.528512 | 5.2:-57369376 | MS.gene61944:CDS |
| TCACATCTCAAATGTTGCAT+TGG | 0.531540 | 5.2:+57367002 | None:intergenic |
| GTAGTTGTTAATCGAACTGA+AGG | 0.532592 | 5.2:-57367569 | MS.gene61944:CDS |
| CGACAACATATATCTCCATT+CGG | 0.533183 | 5.2:+57368493 | None:intergenic |
| CCGCAATGTTAGTCTCAGTT+CGG | 0.534498 | 5.2:+57367750 | None:intergenic |
| TGGTGCAGTTTCTGTTAGCT+CGG | 0.542119 | 5.2:-57367726 | MS.gene61944:CDS |
| CAACTTGTTTGACTTGTGCA+AGG | 0.546113 | 5.2:+57367855 | None:intergenic |
| CATTCGAGCATTTCCGAAAG+GGG | 0.550182 | 5.2:+57367494 | None:intergenic |
| AAGAAAAGCAATGGAAGCAC+AGG | 0.550420 | 5.2:-57367237 | MS.gene61944:CDS |
| GTCAAACAAGTTGTGAAAGC+AGG | 0.553805 | 5.2:-57367845 | MS.gene61944:CDS |
| ATGCAACATTTGAGATGTGA+TGG | 0.556625 | 5.2:-57366999 | MS.gene61944:CDS |
| TCAAACATTTGGTTGCAAAA+GGG | 0.561106 | 5.2:-57367604 | MS.gene61944:CDS |
| TGATGATCTTAAAGAGGTTG+TGG | 0.565478 | 5.2:-57367282 | MS.gene61944:CDS |
| AGAATGCTAGTTATTGGAGC+TGG | 0.568228 | 5.2:-57367647 | MS.gene61944:CDS |
| ATGGAAGCACAGGTGATCAT+CGG | 0.577892 | 5.2:-57367227 | MS.gene61944:CDS |
| AATGTTTAGTCTTGAAACTG+AGG | 0.579905 | 5.2:-57366922 | MS.gene61944:CDS |
| CAAGTTGTGAAAGCAGGACA+AGG | 0.580921 | 5.2:-57367839 | MS.gene61944:CDS |
| TGGCTGCCAACAAAGAGGAC+AGG | 0.581027 | 5.2:-57367262 | MS.gene61944:CDS |
| GGACAGGCTAAGAAAAGCAA+TGG | 0.581200 | 5.2:-57367246 | MS.gene61944:CDS |
| TTGCCATACCAGAAGCAGAA+TGG | 0.581580 | 5.2:-57368584 | MS.gene61944:CDS |
| GCTGTGGATGATCTTAGTAA+GGG | 0.582592 | 5.2:-57367050 | MS.gene61944:CDS |
| TACATTCGAGCATTTCCGAA+AGG | 0.590437 | 5.2:+57367492 | None:intergenic |
| GAACAGCATTTAAGGAACAA+AGG | 0.591818 | 5.2:+57369463 | None:intergenic |
| CAACAGGATATACAAAGGAA+AGG | 0.593342 | 5.2:-57368668 | MS.gene61944:intron |
| TCTGAGCACCTGCAACCGAA+TGG | 0.595913 | 5.2:-57368508 | MS.gene61944:CDS |
| TTGATCAGGTAACTTCATCA+AGG | 0.596661 | 5.2:+57367688 | None:intergenic |
| GTGTCAAAGAAGTCACTGAA+TGG | 0.597620 | 5.2:-57368452 | MS.gene61944:CDS |
| ATTTCTGTTCCTAGAAACGT+AGG | 0.599065 | 5.2:-57367347 | MS.gene61944:CDS |
| ACTGAGACTAACATTGCGGC+TGG | 0.602580 | 5.2:-57367746 | MS.gene61944:CDS |
| GATGTGATGGGAGTGATAGT+AGG | 0.608822 | 5.2:-57366986 | MS.gene61944:CDS |
| TTCAAGCACGCAATCACCGT+CGG | 0.609589 | 5.2:-57367782 | MS.gene61944:CDS |
| CAGTGACTTCTTTGACACCA+CGG | 0.610814 | 5.2:+57368457 | None:intergenic |
| GTGTCATATTAATCTTACTG+TGG | 0.617221 | 5.2:+57366855 | None:intergenic |
| CTGTGGATGATCTTAGTAAG+GGG | 0.621235 | 5.2:-57367049 | MS.gene61944:CDS |
| TTACCTGATCAAGCCTCACA+TGG | 0.622088 | 5.2:-57367677 | MS.gene61944:CDS |
| CAGATTACAAAGCTCACCAA+TGG | 0.622987 | 5.2:+57368554 | None:intergenic |
| TAGCAAGCGAAGAAATGGGA+GGG | 0.637799 | 5.2:-57367388 | MS.gene61944:CDS |
| TTATTGGAGCTGGCAAAATG+GGG | 0.640758 | 5.2:-57367637 | MS.gene61944:CDS |
| ACAGATTTAGCATTATCACT+AGG | 0.641571 | 5.2:+57369310 | None:intergenic |
| GAACAGAAATATCAACGAAG+AGG | 0.651799 | 5.2:+57367360 | None:intergenic |
| GGTTGTGGCTGCCAACAAAG+AGG | 0.660579 | 5.2:-57367267 | MS.gene61944:CDS |
| ACTTTCAACAGGATATACAA+AGG | 0.666271 | 5.2:-57368673 | MS.gene61944:intron |
| GGCTTTGGTAGAAACATCAG+TGG | 0.667204 | 5.2:-57367809 | MS.gene61944:CDS |
| TGCAACATTTGAGATGTGAT+GGG | 0.668284 | 5.2:-57366998 | MS.gene61944:CDS |
| TTAGCAAGCGAAGAAATGGG+AGG | 0.688497 | 5.2:-57367389 | MS.gene61944:CDS |
| GTCGCACTTTCTCAGCACCG+TGG | 0.705085 | 5.2:-57368474 | MS.gene61944:CDS |
| TAGTTGTTAATCGAACTGAA+GGG | 0.734798 | 5.2:-57367568 | MS.gene61944:CDS |
| CCGAACTGAGACTAACATTG+CGG | 0.747883 | 5.2:-57367750 | MS.gene61944:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATACATGTTTAATTATGTT+TGG | - | chr5.2:57367250-57367269 | MS.gene61944:CDS | 15.0% |
| !! | ATACTCTTAATGAATTTATA+TGG | + | chr5.2:57367512-57367531 | None:intergenic | 15.0% |
| !!! | GTTTTTTTGTTAATAATGAA+TGG | - | chr5.2:57367139-57367158 | MS.gene61944:CDS | 15.0% |
| !!! | TTTTCAAAATCATTGTTAAT+TGG | + | chr5.2:57367330-57367349 | None:intergenic | 15.0% |
| !! | AATTAAACACATGAAAGTTA+TGG | - | chr5.2:57367417-57367436 | MS.gene61944:CDS | 20.0% |
| !! | ACTTATAGCTTATACAAAAA+CGG | - | chr5.2:57368084-57368103 | MS.gene61944:intron | 20.0% |
| !! | ATAGAAATAGATTATGCATT+AGG | - | chr5.2:57368131-57368150 | MS.gene61944:intron | 20.0% |
| !! | GAATTTATATGGATATAACA+AGG | + | chr5.2:57367501-57367520 | None:intergenic | 20.0% |
| !! | GATGGTTAATGAATATAATA+AGG | - | chr5.2:57367275-57367294 | MS.gene61944:CDS | 20.0% |
| !! | TAAATATCTACGTATATGTT+TGG | - | chr5.2:57367992-57368011 | MS.gene61944:intron | 20.0% |
| !! | TAACAAAAAAACATTCAAAG+AGG | + | chr5.2:57367131-57367150 | None:intergenic | 20.0% |
| !! | TAATGAATGGTTCAATTATA+TGG | - | chr5.2:57367152-57367171 | MS.gene61944:CDS | 20.0% |
| !!! | ACATTTTGTTTCAAAATCAA+AGG | + | chr5.2:57368949-57368968 | None:intergenic | 20.0% |
| !!! | ACTACTCATTTATCATTTTT+TGG | - | chr5.2:57366962-57366981 | MS.gene61944:CDS | 20.0% |
| !!! | GATTTTGAAACAAAATGTTA+AGG | - | chr5.2:57368951-57368970 | MS.gene61944:intron | 20.0% |
| !!! | TCTATTGTATTGATACATAT+TGG | - | chr5.2:57368339-57368358 | MS.gene61944:intron | 20.0% |
| ! | AAACAAATTGAGTGTATGTT+TGG | + | chr5.2:57368313-57368332 | None:intergenic | 25.0% |
| ! | AATTATATGGTTAAGGTAAG+TGG | - | chr5.2:57367165-57367184 | MS.gene61944:CDS | 25.0% |
| ! | AGAAAAAAATGAACCTACAT+TGG | + | chr5.2:57367949-57367968 | None:intergenic | 25.0% |
| ! | ATAAGCCCTTAATTTCTTAA+TGG | + | chr5.2:57369223-57369242 | None:intergenic | 25.0% |
| ! | ATGGTTCAATTATATGGTTA+AGG | - | chr5.2:57367158-57367177 | MS.gene61944:CDS | 25.0% |
| ! | ATTGTGAATAAAATGCTTCA+TGG | - | chr5.2:57369345-57369364 | MS.gene61944:CDS | 25.0% |
| ! | GAGAAATGTTTAGGTAAAAT+GGG | - | chr5.2:57369270-57369289 | MS.gene61944:intron | 25.0% |
| ! | GTTTAATTATGTTTGGTAGA+TGG | - | chr5.2:57367257-57367276 | MS.gene61944:CDS | 25.0% |
| ! | TAAATGAGTAGTAACATAAG+AGG | + | chr5.2:57366954-57366973 | None:intergenic | 25.0% |
| ! | TCCAACCATTAAGAAATTAA+GGG | - | chr5.2:57369215-57369234 | MS.gene61944:intron | 25.0% |
| ! | TGAGAAATGTTTAGGTAAAA+TGG | - | chr5.2:57369269-57369288 | MS.gene61944:intron | 25.0% |
| ! | TTCCAACCATTAAGAAATTA+AGG | - | chr5.2:57369214-57369233 | MS.gene61944:intron | 25.0% |
| !! | AATCGTTAACCAAAATTTTC+AGG | - | chr5.2:57367348-57367367 | MS.gene61944:CDS | 25.0% |
| !! | CAACATCATTTATTTCTTCA+CGG | + | chr5.2:57368843-57368862 | None:intergenic | 25.0% |
| !! | TTATGAAATTGACTTTCAAC+AGG | - | chr5.2:57367687-57367706 | MS.gene61944:CDS | 25.0% |
| !!! | TCTATTTTTGCTATACAACA+AGG | - | chr5.2:57368426-57368445 | MS.gene61944:intron | 25.0% |
| AAGATGAAGAACAGCATTTA+AGG | + | chr5.2:57366919-57366938 | None:intergenic | 30.0% | |
| AATGCAAGAATGCTAGTTAT+TGG | - | chr5.2:57368718-57368737 | MS.gene61944:intron | 30.0% | |
| ACAGATTTAGCATTATCACT+AGG | + | chr5.2:57367064-57367083 | None:intergenic | 30.0% | |
| ACTTTCAACAGGATATACAA+AGG | - | chr5.2:57367698-57367717 | MS.gene61944:CDS | 30.0% | |
| ATCAAACATTTGGTTGCAAA+AGG | - | chr5.2:57368766-57368785 | MS.gene61944:intron | 30.0% | |
| GATAATTTACAAACCCCTTT+CGG | - | chr5.2:57368864-57368883 | MS.gene61944:intron | 30.0% | |
| TACAAGAATTAGTGCATGAT+TGG | - | chr5.2:57368223-57368242 | MS.gene61944:intron | 30.0% | |
| TAGTTGTTAATCGAACTGAA+GGG | - | chr5.2:57368803-57368822 | MS.gene61944:intron | 30.0% | |
| TCAAACATTTGGTTGCAAAA+GGG | - | chr5.2:57368767-57368786 | MS.gene61944:intron | 30.0% | |
| TGATCACAAATTGTGGTTAA+TGG | - | chr5.2:57367379-57367398 | MS.gene61944:CDS | 30.0% | |
| ! | AAACGTACACCTGAAAATTT+TGG | + | chr5.2:57367360-57367379 | None:intergenic | 30.0% |
| ! | TAGTTTCTATGGTGCTAAAT+TGG | - | chr5.2:57366883-57366902 | MS.gene61944:CDS | 30.0% |
| !! | AATGTTTAGTCTTGAAACTG+AGG | - | chr5.2:57369449-57369468 | MS.gene61944:CDS | 30.0% |
| !! | CAATGTTGATGATCTTAAAG+AGG | - | chr5.2:57369083-57369102 | MS.gene61944:intron | 30.0% |
| AGGTCTTGATTCTCTTGTAA+TGG | - | chr5.2:57368480-57368499 | MS.gene61944:CDS | 35.0% | |
| ATTTCTGTTCCTAGAAACGT+AGG | - | chr5.2:57369024-57369043 | MS.gene61944:intron | 35.0% | |
| CAACAGGATATACAAAGGAA+AGG | - | chr5.2:57367703-57367722 | MS.gene61944:CDS | 35.0% | |
| CACTAATTCTTGTACGAACT+CGG | + | chr5.2:57368217-57368236 | None:intergenic | 35.0% | |
| CGACAACATATATCTCCATT+CGG | + | chr5.2:57367881-57367900 | None:intergenic | 35.0% | |
| GAACAGAAATATCAACGAAG+AGG | + | chr5.2:57369014-57369033 | None:intergenic | 35.0% | |
| GAACAGCATTTAAGGAACAA+AGG | + | chr5.2:57366911-57366930 | None:intergenic | 35.0% | |
| GAAGCTTGTGATCAAACATT+TGG | - | chr5.2:57368756-57368775 | MS.gene61944:intron | 35.0% | |
| GACGGTGTAAATTTGGATTT+CGG | + | chr5.2:57368287-57368306 | None:intergenic | 35.0% | |
| GCAAAAAATTAGAGCTAAGG+TGG | - | chr5.2:57369485-57369504 | MS.gene61944:CDS | 35.0% | |
| GCCCTTAATTTCTTAATGGT+TGG | + | chr5.2:57369219-57369238 | None:intergenic | 35.0% | |
| GCTGAACTTGAGAAATGTTT+AGG | - | chr5.2:57369261-57369280 | MS.gene61944:intron | 35.0% | |
| GGAGCAAAAAATTAGAGCTA+AGG | - | chr5.2:57369482-57369501 | MS.gene61944:CDS | 35.0% | |
| GGCTTATGCTGAAAGATTAA+GGG | - | chr5.2:57369236-57369255 | MS.gene61944:intron | 35.0% | |
| GGTCTTGATTCTCTTGTAAT+GGG | - | chr5.2:57368481-57368500 | MS.gene61944:CDS | 35.0% | |
| GTACGTTTGATCACAAATTG+TGG | - | chr5.2:57367372-57367391 | MS.gene61944:CDS | 35.0% | |
| GTAGTTGTTAATCGAACTGA+AGG | - | chr5.2:57368802-57368821 | MS.gene61944:intron | 35.0% | |
| TAAGAAGACACAAAAAGCTG+TGG | - | chr5.2:57369305-57369324 | MS.gene61944:CDS | 35.0% | |
| TCACATCTCAAATGTTGCAT+TGG | + | chr5.2:57369372-57369391 | None:intergenic | 35.0% | |
| TCGTCGATGACTAATATCTA+CGG | + | chr5.2:57367595-57367614 | None:intergenic | 35.0% | |
| TGAGTGTATGTTTGGATTGA+CGG | + | chr5.2:57368305-57368324 | None:intergenic | 35.0% | |
| TGATGATCTTAAAGAGGTTG+TGG | - | chr5.2:57369089-57369108 | MS.gene61944:intron | 35.0% | |
| TTGATCAGGTAACTTCATCA+AGG | + | chr5.2:57368686-57368705 | None:intergenic | 35.0% | |
| TTGGATTGACGGTGTAAATT+TGG | + | chr5.2:57368294-57368313 | None:intergenic | 35.0% | |
| ! | ATGCAACATTTGAGATGTGA+TGG | - | chr5.2:57369372-57369391 | MS.gene61944:CDS | 35.0% |
| ! | GCTGTTTCAACTAGTTTCTA+TGG | - | chr5.2:57366872-57366891 | MS.gene61944:CDS | 35.0% |
| ! | TGAAACTGAGGTTTCTGTTT+TGG | - | chr5.2:57369461-57369480 | MS.gene61944:CDS | 35.0% |
| ! | TGCAAAAGGGTGTAAAAAGA+TGG | - | chr5.2:57368780-57368799 | MS.gene61944:intron | 35.0% |
| ! | TGCAACATTTGAGATGTGAT+GGG | - | chr5.2:57369373-57369392 | MS.gene61944:CDS | 35.0% |
| !!! | TTCTTGTTTTTGCAGACAAG+TGG | - | chr5.2:57368376-57368395 | MS.gene61944:intron | 35.0% |
| AAAGCAGGACAAGGAGTTAA+TGG | - | chr5.2:57368541-57368560 | MS.gene61944:CDS | 40.0% | |
| ACACATGAACCTACGTTTCT+AGG | + | chr5.2:57369036-57369055 | None:intergenic | 40.0% | |
| ACATTCGAGCATTTCCGAAA+GGG | + | chr5.2:57368881-57368900 | None:intergenic | 40.0% | |
| ACTGAATGGATGTCCAATGT+AGG | - | chr5.2:57367933-57367952 | MS.gene61944:CDS | 40.0% | |
| AGAATGCTAGTTATTGGAGC+TGG | - | chr5.2:57368724-57368743 | MS.gene61944:intron | 40.0% | |
| AGCTGTGGATGATCTTAGTA+AGG | - | chr5.2:57369320-57369339 | MS.gene61944:CDS | 40.0% | |
| AGTTATTGGAGCTGGCAAAA+TGG | - | chr5.2:57368732-57368751 | MS.gene61944:intron | 40.0% | |
| ATATATCTCCATTCGGTTGC+AGG | + | chr5.2:57367874-57367893 | None:intergenic | 40.0% | |
| CAGATTACAAAGCTCACCAA+TGG | + | chr5.2:57367820-57367839 | None:intergenic | 40.0% | |
| CCTTTAGCAAGCGAAGAAAT+GGG | - | chr5.2:57368979-57368998 | MS.gene61944:intron | 40.0% | |
| CGATGATCTTGAGTCTGTTA+AGG | - | chr5.2:57369056-57369075 | MS.gene61944:intron | 40.0% | |
| CTGTGGATGATCTTAGTAAG+GGG | - | chr5.2:57369322-57369341 | MS.gene61944:CDS | 40.0% | |
| GACCTGCTGATACTTCAAAA+AGG | + | chr5.2:57368465-57368484 | None:intergenic | 40.0% | |
| GCTGTGGATGATCTTAGTAA+GGG | - | chr5.2:57369321-57369340 | MS.gene61944:CDS | 40.0% | |
| GGGCTTATGCTGAAAGATTA+AGG | - | chr5.2:57369235-57369254 | MS.gene61944:intron | 40.0% | |
| GTCAAACAAGTTGTGAAAGC+AGG | - | chr5.2:57368526-57368545 | MS.gene61944:CDS | 40.0% | |
| GTGTCAAAGAAGTCACTGAA+TGG | - | chr5.2:57367919-57367938 | MS.gene61944:CDS | 40.0% | |
| GTTATTGGAGCTGGCAAAAT+GGG | - | chr5.2:57368733-57368752 | MS.gene61944:intron | 40.0% | |
| TACATTCGAGCATTTCCGAA+AGG | + | chr5.2:57368882-57368901 | None:intergenic | 40.0% | |
| TCCTTTAGCAAGCGAAGAAA+TGG | - | chr5.2:57368978-57368997 | MS.gene61944:intron | 40.0% | |
| TCGGAAATGCTCGAATGTAT+TGG | - | chr5.2:57368883-57368902 | MS.gene61944:intron | 40.0% | |
| TTAGTGCATGATTGGAACCA+CGG | - | chr5.2:57368231-57368250 | MS.gene61944:intron | 40.0% | |
| TTATTGGAGCTGGCAAAATG+GGG | - | chr5.2:57368734-57368753 | MS.gene61944:intron | 40.0% | |
| ! | AAGAAAAGCAATGGAAGCAC+AGG | - | chr5.2:57369134-57369153 | MS.gene61944:intron | 40.0% |
| ! | AATCGGGACAATTTGAAGCT+TGG | - | chr5.2:57369172-57369191 | MS.gene61944:intron | 40.0% |
| ! | ATCGTGATTAGTTACGTTCG+TGG | - | chr5.2:57367455-57367474 | MS.gene61944:CDS | 40.0% |
| ! | CGCTTCATCTTCTGATGTTT+TGG | - | chr5.2:57367033-57367052 | MS.gene61944:CDS | 40.0% |
| ! | GATTCTCTTGTAATGGGAGA+AGG | - | chr5.2:57368487-57368506 | MS.gene61944:CDS | 40.0% |
| !! | AAGAGCTTTGTTCAAAGCAG+AGG | - | chr5.2:57366995-57367014 | MS.gene61944:CDS | 40.0% |
| !! | CAACTTGTTTGACTTGTGCA+AGG | + | chr5.2:57368519-57368538 | None:intergenic | 40.0% |
| !!! | CACCTTTTTGAAGTATCAGC+AGG | - | chr5.2:57368460-57368479 | MS.gene61944:CDS | 40.0% |
| AGGAGCAGCATTGTCGTTAT+TGG | - | chr5.2:57367723-57367742 | MS.gene61944:CDS | 45.0% | |
| CAAGTTGTGAAAGCAGGACA+AGG | - | chr5.2:57368532-57368551 | MS.gene61944:CDS | 45.0% | |
| CAGTGACTTCTTTGACACCA+CGG | + | chr5.2:57367917-57367936 | None:intergenic | 45.0% | |
| CATTCGAGCATTTCCGAAAG+GGG | + | chr5.2:57368880-57368899 | None:intergenic | 45.0% | |
| CATTCTTGCATTGCCATGTG+AGG | + | chr5.2:57368710-57368729 | None:intergenic | 45.0% | |
| CCGAACTGAGACTAACATTG+CGG | - | chr5.2:57368621-57368640 | MS.gene61944:CDS | 45.0% | |
| GGACAAGGAGTTAATGGCTT+TGG | - | chr5.2:57368547-57368566 | MS.gene61944:CDS | 45.0% | |
| GGACAGGCTAAGAAAAGCAA+TGG | - | chr5.2:57369125-57369144 | MS.gene61944:intron | 45.0% | |
| GGAGCAGCATTGTCGTTATT+GGG | - | chr5.2:57367724-57367743 | MS.gene61944:CDS | 45.0% | |
| TAGCAAGCGAAGAAATGGGA+GGG | - | chr5.2:57368983-57369002 | MS.gene61944:intron | 45.0% | |
| TCTTAGCCTGTCCTCTTTGT+TGG | + | chr5.2:57369118-57369137 | None:intergenic | 45.0% | |
| TGGTGCAGTTTCTGTTAGCT+CGG | - | chr5.2:57368645-57368664 | MS.gene61944:CDS | 45.0% | |
| TTACCTGATCAAGCCTCACA+TGG | - | chr5.2:57368694-57368713 | MS.gene61944:intron | 45.0% | |
| TTAGCAAGCGAAGAAATGGG+AGG | - | chr5.2:57368982-57369001 | MS.gene61944:intron | 45.0% | |
| TTGCCATACCAGAAGCAGAA+TGG | - | chr5.2:57367787-57367806 | MS.gene61944:CDS | 45.0% | |
| TTGTAGCTTCACACTTACCG+TGG | + | chr5.2:57368251-57368270 | None:intergenic | 45.0% | |
| ! | ATGGAAGCACAGGTGATCAT+CGG | - | chr5.2:57369144-57369163 | MS.gene61944:intron | 45.0% |
| ! | CCCATTTCTTCGCTTGCTAA+AGG | + | chr5.2:57368982-57369001 | None:intergenic | 45.0% |
| ! | CCGCAATGTTAGTCTCAGTT+CGG | + | chr5.2:57368624-57368643 | None:intergenic | 45.0% |
| ! | GATGTGATGGGAGTGATAGT+AGG | - | chr5.2:57369385-57369404 | MS.gene61944:CDS | 45.0% |
| ! | GGCTTTGGTAGAAACATCAG+TGG | - | chr5.2:57368562-57368581 | MS.gene61944:CDS | 45.0% |
| ! | TACTTTGACAGCTCTGATGC+AGG | + | chr5.2:57368406-57368425 | None:intergenic | 45.0% |
| !!! | TTTTTTTTATAATAATTTGT+TGG | - | chr5.2:57367214-57367233 | MS.gene61944:CDS | 5.0% |
| ACGCAATCACCGTCGGTAAA+AGG | - | chr5.2:57368596-57368615 | MS.gene61944:CDS | 50.0% | |
| ACTGAGACTAACATTGCGGC+TGG | - | chr5.2:57368625-57368644 | MS.gene61944:CDS | 50.0% | |
| AGGCCATTCTGCTTCTGGTA+TGG | + | chr5.2:57367793-57367812 | None:intergenic | 50.0% | |
| CAAAGCTCACCAATGGCTCT+AGG | + | chr5.2:57367813-57367832 | None:intergenic | 50.0% | |
| CGCAATCACCGTCGGTAAAA+GGG | - | chr5.2:57368597-57368616 | MS.gene61944:CDS | 50.0% | |
| GGTGATCATCGGCGAAGAAT+CGG | - | chr5.2:57369155-57369174 | MS.gene61944:intron | 50.0% | |
| GTGATCATCGGCGAAGAATC+GGG | - | chr5.2:57369156-57369175 | MS.gene61944:intron | 50.0% | |
| TTCAAGCACGCAATCACCGT+CGG | - | chr5.2:57368589-57368608 | MS.gene61944:CDS | 50.0% | |
| TTGCCATGTGAGGCTTGATC+AGG | + | chr5.2:57368700-57368719 | None:intergenic | 50.0% | |
| ! | AGTTCGGACCCTTTTACCGA+CGG | + | chr5.2:57368608-57368627 | None:intergenic | 50.0% |
| ! | AGTTTTTCGCGCACATCGAC+TGG | + | chr5.2:57367768-57367787 | None:intergenic | 50.0% |
| GCAGAATGGCCTAGAGCCAT+TGG | - | chr5.2:57367801-57367820 | MS.gene61944:CDS | 55.0% | |
| GGTTGTGGCTGCCAACAAAG+AGG | - | chr5.2:57369104-57369123 | MS.gene61944:intron | 55.0% | |
| TCTGAGCACCTGCAACCGAA+TGG | - | chr5.2:57367863-57367882 | MS.gene61944:CDS | 55.0% | |
| TGGCTGCCAACAAAGAGGAC+AGG | - | chr5.2:57369109-57369128 | MS.gene61944:intron | 55.0% | |
| ! | GCTCTAGGCCATTCTGCTTC+TGG | + | chr5.2:57367798-57367817 | None:intergenic | 55.0% |
| GTCGCACTTTCTCAGCACCG+TGG | - | chr5.2:57367897-57367916 | MS.gene61944:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 57366869 | 57369524 | 57366869 | ID=MS.gene61944 |
| chr5.2 | mRNA | 57366869 | 57369524 | 57366869 | ID=MS.gene61944.t1;Parent=MS.gene61944 |
| chr5.2 | exon | 57369272 | 57369524 | 57369272 | ID=MS.gene61944.t1.exon1;Parent=MS.gene61944.t1 |
| chr5.2 | CDS | 57369272 | 57369524 | 57369272 | ID=cds.MS.gene61944.t1;Parent=MS.gene61944.t1 |
| chr5.2 | exon | 57368443 | 57368684 | 57368443 | ID=MS.gene61944.t1.exon2;Parent=MS.gene61944.t1 |
| chr5.2 | CDS | 57368443 | 57368684 | 57368443 | ID=cds.MS.gene61944.t1;Parent=MS.gene61944.t1 |
| chr5.2 | exon | 57366869 | 57368002 | 57366869 | ID=MS.gene61944.t1.exon3;Parent=MS.gene61944.t1 |
| chr5.2 | CDS | 57366869 | 57368002 | 57366869 | ID=cds.MS.gene61944.t1;Parent=MS.gene61944.t1 |
| Gene Sequence |
| Protein sequence |
