Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028991.01.T01 | XP_024640395.1 | 97.568 | 329 | 6 | 2 | 1 | 328 | 1 | 328 | 0 | 645 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028991.01.T01 | G7KBP4 | 97.568 | 329 | 6 | 2 | 1 | 328 | 1 | 328 | 0.0 | 645 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047944.01 | MsG0580028991.01 | 0.804211 | 2.409194e-49 | 1.234911e-46 |
| MsG0080048461.01 | MsG0580028991.01 | 0.804347 | 2.256600e-49 | 1.160789e-46 |
| MsG0080048462.01 | MsG0580028991.01 | 0.804008 | 2.654747e-49 | 1.353785e-46 |
| MsG0080048856.01 | MsG0580028991.01 | 0.806344 | 8.608849e-50 | 4.661378e-47 |
| MsG0180000195.01 | MsG0580028991.01 | 0.826828 | 2.189406e-54 | 2.076270e-51 |
| MsG0180000334.01 | MsG0580028991.01 | 0.828201 | 1.025488e-54 | 1.012302e-51 |
| MsG0180000470.01 | MsG0580028991.01 | 0.826667 | 2.392625e-54 | 2.258558e-51 |
| MsG0180000732.01 | MsG0580028991.01 | 0.803828 | 2.892724e-49 | 1.468355e-46 |
| MsG0180001063.01 | MsG0580028991.01 | 0.818174 | 2.249705e-52 | 1.671756e-49 |
| MsG0180001312.01 | MsG0580028991.01 | 0.802023 | 6.829143e-49 | 3.310026e-46 |
| MsG0180001687.01 | MsG0580028991.01 | 0.805440 | 1.333608e-49 | 7.055786e-47 |
| MsG0180002973.01 | MsG0580028991.01 | 0.826268 | 2.977423e-54 | 2.778831e-51 |
| MsG0180003669.01 | MsG0580028991.01 | 0.835579 | 1.546105e-56 | 1.898533e-53 |
| MsG0180003673.01 | MsG0580028991.01 | 0.806628 | 7.501821e-50 | 4.091280e-47 |
| MsG0180003686.01 | MsG0580028991.01 | 0.803036 | 4.221599e-49 | 2.099644e-46 |
| MsG0180003810.01 | MsG0580028991.01 | 0.801200 | 1.007299e-48 | 4.781734e-46 |
| MsG0180004157.01 | MsG0580028991.01 | 0.823159 | 1.609646e-53 | 1.375078e-50 |
| MsG0180004389.01 | MsG0580028991.01 | 0.806856 | 6.711553e-50 | 3.682292e-47 |
| MsG0180004465.01 | MsG0580028991.01 | 0.804138 | 2.494752e-49 | 1.276416e-46 |
| MsG0180004996.01 | MsG0580028991.01 | 0.805683 | 1.185852e-49 | 6.313686e-47 |
| MsG0180005050.01 | MsG0580028991.01 | 0.850034 | 2.204580e-60 | 4.261872e-57 |
| MsG0180005398.01 | MsG0580028991.01 | 0.801015 | 1.098917e-48 | 5.192722e-46 |
| MsG0180005842.01 | MsG0580028991.01 | 0.810331 | 1.215558e-50 | 7.306449e-48 |
| MsG0180005954.01 | MsG0580028991.01 | 0.800640 | 1.310737e-48 | 6.134574e-46 |
| MsG0180005990.01 | MsG0580028991.01 | 0.810472 | 1.133466e-50 | 6.838558e-48 |
| MsG0180005993.01 | MsG0580028991.01 | 0.831280 | 1.825279e-55 | 1.971395e-52 |
| MsG0280006356.01 | MsG0580028991.01 | 0.824900 | 6.280440e-54 | 5.638004e-51 |
| MsG0280006422.01 | MsG0580028991.01 | 0.812560 | 3.987665e-51 | 2.543582e-48 |
| MsG0280010614.01 | MsG0580028991.01 | 0.802938 | 4.423673e-49 | 2.194664e-46 |
| MsG0280010702.01 | MsG0580028991.01 | 0.806655 | 7.401450e-50 | 4.039425e-47 |
| MsG0280010796.01 | MsG0580028991.01 | 0.811817 | 5.790720e-51 | 3.620565e-48 |
| MsG0280011052.01 | MsG0580028991.01 | 0.816582 | 5.135090e-52 | 3.652901e-49 |
| MsG0280011070.01 | MsG0580028991.01 | 0.806525 | 7.884026e-50 | 4.288745e-47 |
| MsG0280011086.01 | MsG0580028991.01 | 0.817740 | 2.818467e-52 | 2.069728e-49 |
| MsG0280011156.01 | MsG0580028991.01 | 0.817467 | 3.247907e-52 | 2.367361e-49 |
| MsG0380011537.01 | MsG0580028991.01 | 0.813768 | 2.166044e-51 | 1.427156e-48 |
| MsG0380011609.01 | MsG0580028991.01 | 0.808927 | 2.434398e-50 | 1.409863e-47 |
| MsG0380013176.01 | MsG0580028991.01 | 0.805323 | 1.411087e-49 | 7.443290e-47 |
| MsG0380014365.01 | MsG0580028991.01 | 0.818567 | 1.832210e-52 | 1.376337e-49 |
| MsG0380014537.01 | MsG0580028991.01 | 0.802201 | 6.277564e-49 | 3.056400e-46 |
| MsG0380014573.01 | MsG0580028991.01 | 0.854495 | 1.184858e-61 | 2.651073e-58 |
| MsG0380014701.01 | MsG0580028991.01 | 0.809239 | 2.087455e-50 | 1.219188e-47 |
| MsG0380014770.01 | MsG0580028991.01 | 0.801606 | 8.316856e-49 | 3.988555e-46 |
| MsG0480018964.01 | MsG0580028991.01 | 0.800494 | 1.404132e-48 | 6.547252e-46 |
| MsG0480019434.01 | MsG0580028991.01 | 0.825826 | 3.792423e-54 | 3.495268e-51 |
| MsG0480019435.01 | MsG0580028991.01 | 0.805818 | 1.111022e-49 | 5.935694e-47 |
| MsG0480019562.01 | MsG0580028991.01 | 0.825077 | 5.704434e-54 | 5.146725e-51 |
| MsG0480020090.01 | MsG0580028991.01 | 0.825937 | 3.569446e-54 | 3.300294e-51 |
| MsG0480020445.01 | MsG0580028991.01 | 0.803276 | 3.766797e-49 | 1.884997e-46 |
| MsG0480020447.01 | MsG0580028991.01 | 0.804053 | 2.597962e-49 | 1.326385e-46 |
| MsG0480020675.01 | MsG0580028991.01 | 0.820964 | 5.193500e-53 | 4.170221e-50 |
| MsG0480020839.01 | MsG0580028991.01 | 0.828566 | 8.370652e-55 | 8.351408e-52 |
| MsG0480021280.01 | MsG0580028991.01 | 0.805967 | 1.033476e-49 | 5.542666e-47 |
| MsG0480021558.01 | MsG0580028991.01 | 0.811651 | 6.291896e-51 | 3.916431e-48 |
| MsG0480021695.01 | MsG0580028991.01 | 0.803890 | 2.809408e-49 | 1.428362e-46 |
| MsG0480021853.01 | MsG0580028991.01 | 0.806366 | 8.519774e-50 | 4.615669e-47 |
| MsG0480021917.01 | MsG0580028991.01 | 0.818919 | 1.524767e-52 | 1.156714e-49 |
| MsG0480022052.01 | MsG0580028991.01 | -0.823242 | 1.539311e-53 | 1.318062e-50 |
| MsG0480022068.01 | MsG0580028991.01 | 0.817330 | 3.486970e-52 | 2.531894e-49 |
| MsG0480022164.01 | MsG0580028991.01 | 0.801179 | 1.017208e-48 | 4.826251e-46 |
| MsG0480022207.01 | MsG0580028991.01 | 0.813992 | 1.932547e-51 | 1.281117e-48 |
| MsG0480022222.01 | MsG0580028991.01 | 0.828337 | 9.509680e-55 | 9.424059e-52 |
| MsG0480022768.01 | MsG0580028991.01 | 0.816837 | 4.501385e-52 | 3.224648e-49 |
| MsG0480022827.01 | MsG0580028991.01 | 0.823661 | 1.228029e-53 | 1.064153e-50 |
| MsG0480022985.01 | MsG0580028991.01 | 0.800735 | 1.253483e-48 | 5.880726e-46 |
| MsG0480023014.01 | MsG0580028991.01 | 0.832986 | 6.912691e-56 | 7.854296e-53 |
| MsG0480023025.01 | MsG0580028991.01 | 0.834959 | 2.217173e-56 | 2.672694e-53 |
| MsG0480023654.01 | MsG0580028991.01 | 0.817566 | 3.085206e-52 | 2.254691e-49 |
| MsG0480023718.01 | MsG0580028991.01 | 0.827287 | 1.700868e-54 | 1.634857e-51 |
| MsG0580024981.01 | MsG0580028991.01 | 0.805480 | 1.308346e-49 | 6.929281e-47 |
| MsG0580025008.01 | MsG0580028991.01 | 0.811541 | 6.647944e-51 | 4.126456e-48 |
| MsG0580025022.01 | MsG0580028991.01 | 0.814176 | 1.760204e-51 | 1.172718e-48 |
| MsG0580025448.01 | MsG0580028991.01 | 0.805183 | 1.509789e-49 | 7.935378e-47 |
| MsG0580025555.01 | MsG0580028991.01 | 0.805681 | 1.187297e-49 | 6.320938e-47 |
| MsG0580025758.01 | MsG0580028991.01 | 0.844637 | 6.683755e-59 | 1.085766e-55 |
| MsG0380015300.01 | MsG0580028991.01 | 0.806089 | 9.745088e-50 | 5.242454e-47 |
| MsG0380015332.01 | MsG0580028991.01 | 0.808893 | 2.475451e-50 | 1.432325e-47 |
| MsG0380015440.01 | MsG0580028991.01 | 0.825412 | 4.753231e-54 | 4.329161e-51 |
| MsG0380015538.01 | MsG0580028991.01 | 0.802718 | 4.911900e-49 | 2.423381e-46 |
| MsG0380015555.01 | MsG0580028991.01 | 0.811682 | 6.194683e-51 | 3.859142e-48 |
| MsG0380015564.01 | MsG0580028991.01 | 0.824814 | 6.581750e-54 | 5.893846e-51 |
| MsG0380015566.01 | MsG0580028991.01 | 0.802129 | 6.495495e-49 | 3.156820e-46 |
| MsG0380015720.01 | MsG0580028991.01 | 0.801078 | 1.066952e-48 | 5.049543e-46 |
| MsG0380015771.01 | MsG0580028991.01 | 0.805621 | 1.222119e-49 | 6.496071e-47 |
| MsG0380015830.01 | MsG0580028991.01 | 0.820658 | 6.105966e-53 | 4.860483e-50 |
| MsG0380016004.01 | MsG0580028991.01 | 0.815542 | 8.763242e-52 | 6.059234e-49 |
| MsG0380016064.01 | MsG0580028991.01 | 0.812626 | 3.857378e-51 | 2.464746e-48 |
| MsG0380016517.01 | MsG0580028991.01 | 0.807460 | 5.001765e-50 | 2.787534e-47 |
| MsG0380016624.01 | MsG0580028991.01 | 0.805112 | 1.562492e-49 | 8.197355e-47 |
| MsG0380016910.01 | MsG0580028991.01 | 0.808058 | 3.731263e-50 | 2.112174e-47 |
| MsG0380016970.01 | MsG0580028991.01 | 0.815182 | 1.053961e-51 | 7.215233e-49 |
| MsG0380017140.01 | MsG0580028991.01 | 0.811596 | 6.468135e-51 | 4.020345e-48 |
| MsG0380017543.01 | MsG0580028991.01 | 0.805416 | 1.349102e-49 | 7.133387e-47 |
| MsG0380017680.01 | MsG0580028991.01 | 0.811403 | 7.124968e-51 | 4.406469e-48 |
| MsG0580026777.01 | MsG0580028991.01 | 0.806889 | 6.607540e-50 | 3.628132e-47 |
| MsG0580027152.01 | MsG0580028991.01 | 0.808648 | 2.793026e-50 | 1.605708e-47 |
| MsG0580027320.01 | MsG0580028991.01 | 0.816999 | 4.140122e-52 | 2.979205e-49 |
| MsG0580027344.01 | MsG0580028991.01 | 0.815645 | 8.311978e-52 | 5.763715e-49 |
| MsG0580028517.01 | MsG0580028991.01 | 0.819799 | 9.607597e-53 | 7.468649e-50 |
| MsG0580028991.01 | MsG0580029008.01 | 0.807959 | 3.916607e-50 | 2.211368e-47 |
| MsG0580028991.01 | MsG0580029189.01 | 0.828867 | 7.078990e-55 | 7.123866e-52 |
| MsG0580028991.01 | MsG0580029554.01 | 0.806302 | 8.789116e-50 | 4.753901e-47 |
| MsG0580028991.01 | MsG0580029651.01 | 0.817021 | 4.093438e-52 | 2.947306e-49 |
| MsG0580028991.01 | MsG0580029762.01 | 0.810599 | 1.064104e-50 | 6.441853e-48 |
| MsG0580028991.01 | MsG0580029925.01 | 0.809401 | 1.926821e-50 | 1.130218e-47 |
| MsG0580028991.01 | MsG0580030142.01 | 0.804215 | 2.403847e-49 | 1.232317e-46 |
| MsG0580028991.01 | MsG0680030415.01 | 0.815152 | 1.070381e-51 | 7.321685e-49 |
| MsG0580028991.01 | MsG0680030447.01 | 0.800306 | 1.533116e-48 | 7.115068e-46 |
| MsG0580028991.01 | MsG0680030597.01 | 0.800107 | 1.682756e-48 | 7.769806e-46 |
| MsG0580028991.01 | MsG0680030685.01 | 0.807862 | 4.108266e-50 | 2.313542e-47 |
| MsG0580028991.01 | MsG0680030918.01 | 0.803726 | 3.037318e-49 | 1.537673e-46 |
| MsG0580028991.01 | MsG0680031506.01 | 0.814409 | 1.563377e-51 | 1.048263e-48 |
| MsG0580028991.01 | MsG0680031946.01 | 0.808649 | 2.791991e-50 | 1.605145e-47 |
| MsG0580028991.01 | MsG0680032058.01 | 0.811388 | 7.179010e-51 | 4.437873e-48 |
| MsG0580028991.01 | MsG0680033619.01 | 0.809701 | 1.661435e-50 | 9.823311e-48 |
| MsG0580028991.01 | MsG0680033792.01 | 0.830585 | 2.703026e-55 | 2.859962e-52 |
| MsG0580028991.01 | MsG0680035346.01 | 0.828277 | 9.832693e-55 | 9.727346e-52 |
| MsG0580028991.01 | MsG0680035475.01 | 0.801623 | 8.250347e-49 | 3.958348e-46 |
| MsG0580028991.01 | MsG0680035573.01 | 0.800300 | 1.537609e-48 | 7.134815e-46 |
| MsG0580028991.01 | MsG0680035876.01 | 0.800976 | 1.119429e-48 | 5.284323e-46 |
| MsG0580028991.01 | MsG0780036340.01 | 0.811581 | 6.517252e-51 | 4.049408e-48 |
| MsG0580028991.01 | MsG0780036719.01 | 0.805335 | 1.402999e-49 | 7.402899e-47 |
| MsG0580028991.01 | MsG0780037141.01 | 0.809664 | 1.692282e-50 | 9.996139e-48 |
| MsG0580028991.01 | MsG0780037287.01 | 0.806700 | 7.243127e-50 | 3.957720e-47 |
| MsG0580028991.01 | MsG0780038386.01 | 0.807169 | 5.764867e-50 | 3.188512e-47 |
| MsG0580028991.01 | MsG0780038603.01 | 0.827797 | 1.282652e-54 | 1.251186e-51 |
| MsG0580028991.01 | MsG0780038827.01 | 0.814802 | 1.279546e-51 | 8.670422e-49 |
| MsG0580028991.01 | MsG0780038911.01 | 0.812071 | 5.098125e-51 | 3.209419e-48 |
| MsG0580028991.01 | MsG0780039144.01 | 0.806084 | 9.768906e-50 | 5.254586e-47 |
| MsG0580028991.01 | MsG0780039170.01 | 0.808136 | 3.592218e-50 | 2.037709e-47 |
| MsG0580028991.01 | MsG0780039307.01 | 0.818443 | 1.955485e-52 | 1.464098e-49 |
| MsG0580028991.01 | MsG0780039423.01 | 0.816051 | 6.749573e-52 | 4.732601e-49 |
| MsG0580028991.01 | MsG0780039443.01 | 0.801331 | 9.469407e-49 | 4.510075e-46 |
| MsG0580028991.01 | MsG0780040162.01 | 0.816108 | 6.553472e-52 | 4.602040e-49 |
| MsG0580028991.01 | MsG0780040344.01 | 0.810092 | 1.368820e-50 | 8.176290e-48 |
| MsG0580028991.01 | MsG0780040545.01 | 0.800758 | 1.240198e-48 | 5.821599e-46 |
| MsG0580028991.01 | MsG0780040576.01 | -0.802262 | 6.099182e-49 | 2.974298e-46 |
| MsG0580028991.01 | MsG0780040947.01 | 0.832834 | 7.537269e-56 | 8.524372e-53 |
| MsG0580028991.01 | MsG0780041030.01 | 0.838822 | 2.288387e-57 | 3.101148e-54 |
| MsG0580028991.01 | MsG0780041065.01 | 0.830406 | 2.989613e-55 | 3.146870e-52 |
| MsG0580028991.01 | MsG0780041456.01 | 0.817219 | 3.693808e-52 | 2.673939e-49 |
| MsG0580028991.01 | MsG0780041559.01 | 0.822844 | 1.905422e-53 | 1.613424e-50 |
| MsG0580028991.01 | MsG0880042031.01 | 0.805660 | 1.199061e-49 | 6.380059e-47 |
| MsG0580028991.01 | MsG0880042518.01 | 0.826542 | 2.562890e-54 | 2.410509e-51 |
| MsG0580028991.01 | MsG0880042698.01 | 0.807202 | 5.672146e-50 | 3.139978e-47 |
| MsG0580028991.01 | MsG0880043082.01 | 0.811992 | 5.305236e-51 | 3.332630e-48 |
| MsG0580028991.01 | MsG0880043144.01 | 0.817984 | 2.483519e-52 | 1.835817e-49 |
| MsG0580028991.01 | MsG0880043465.01 | 0.832672 | 8.269895e-56 | 9.308239e-53 |
| MsG0580028991.01 | MsG0880043591.01 | 0.819174 | 1.333659e-52 | 1.018776e-49 |
| MsG0580028991.01 | MsG0880044075.01 | 0.808591 | 2.873409e-50 | 1.649456e-47 |
| MsG0580028991.01 | MsG0880044248.01 | 0.819502 | 1.122751e-52 | 8.655722e-50 |
| MsG0580028991.01 | MsG0880044415.01 | 0.819629 | 1.050510e-52 | 8.126833e-50 |
| MsG0580028991.01 | MsG0880044510.01 | 0.813958 | 1.966886e-51 | 1.302648e-48 |
| MsG0580028991.01 | MsG0880044573.01 | 0.817859 | 2.650264e-52 | 1.952492e-49 |
| MsG0580028991.01 | MsG0880045111.01 | 0.824077 | 9.810504e-54 | 8.600892e-51 |
| MsG0580028991.01 | MsG0880045372.01 | 0.803153 | 3.993754e-49 | 1.992334e-46 |
| MsG0580028991.01 | MsG0880045639.01 | 0.815893 | 7.318310e-52 | 5.108647e-49 |
| MsG0580028991.01 | MsG0880045736.01 | 0.837991 | 3.749425e-57 | 4.954463e-54 |
| MsG0580028991.01 | MsG0880046762.01 | 0.820706 | 5.951311e-53 | 4.744035e-50 |
| MsG0580028991.01 | MsG0880047191.01 | 0.832912 | 7.209889e-56 | 8.173208e-53 |
| MsG0580028991.01 | MsG0880047594.01 | 0.814404 | 1.567391e-51 | 1.050802e-48 |
| MsG0280007072.01 | MsG0580028991.01 | 0.802084 | 6.634489e-49 | 3.220772e-46 |
| MsG0280007311.01 | MsG0580028991.01 | 0.830407 | 2.987767e-55 | 3.145034e-52 |
| MsG0280007727.01 | MsG0580028991.01 | 0.823684 | 1.212870e-53 | 1.051752e-50 |
| MsG0280008112.01 | MsG0580028991.01 | 0.824337 | 8.525911e-54 | 7.529637e-51 |
| MsG0280008204.01 | MsG0580028991.01 | 0.825030 | 5.854859e-54 | 5.275316e-51 |
| MsG0280008615.01 | MsG0580028991.01 | 0.848899 | 4.568323e-60 | 8.510368e-57 |
| MsG0280008696.01 | MsG0580028991.01 | 0.801931 | 7.132812e-49 | 3.449121e-46 |
| MsG0280008970.01 | MsG0580028991.01 | 0.818599 | 1.802328e-52 | 1.355045e-49 |
| MsG0280008971.01 | MsG0580028991.01 | 0.805229 | 1.476486e-49 | 7.769431e-47 |
| MsG0280009024.01 | MsG0580028991.01 | 0.833654 | 4.711183e-56 | 5.460456e-53 |
| MsG0280009739.01 | MsG0580028991.01 | 0.824916 | 6.229077e-54 | 5.594282e-51 |
| MsG0280009748.01 | MsG0580028991.01 | 0.802607 | 5.176503e-49 | 2.546633e-46 |
| MsG0280009813.01 | MsG0580028991.01 | 0.809157 | 2.174127e-50 | 1.266976e-47 |
| MsG0280010233.01 | MsG0580028991.01 | 0.816283 | 5.990779e-52 | 4.227192e-49 |
| MsG0280010389.01 | MsG0580028991.01 | 0.805415 | 1.349512e-49 | 7.135461e-47 |
| MsG0280010443.01 | MsG0580028991.01 | 0.800549 | 1.368331e-48 | 6.389135e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028991.01.T01 | MTR_5g079680 | 97.568 | 329 | 6 | 2 | 1 | 328 | 1 | 328 | 0.0 | 645 |
| MsG0580028991.01.T01 | MTR_8g085190 | 49.664 | 149 | 65 | 2 | 2 | 141 | 5 | 152 | 1.51e-41 | 150 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 92 sgRNAs with CRISPR-Local
Find 118 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCATCATGGTGGTGGTTT+GGG | 0.171912 | 5:-90044628 | MsG0580028991.01.T01:CDS |
| GGGATGGGTGGTGCTGGATT+AGG | 0.238214 | 5:-90044670 | MsG0580028991.01.T01:CDS |
| GTTGCATCATGGTGGTGGTT+TGG | 0.285567 | 5:-90044629 | MsG0580028991.01.T01:CDS |
| AGGAGGTTGAGAAGAGAGTT+AGG | 0.287828 | 5:-90044909 | MsG0580028991.01.T01:CDS |
| TGAAGAAGAATTGAAGAGAT+TGG | 0.292149 | 5:-90045109 | MsG0580028991.01.T01:CDS |
| AATTGGAATTGGAGGCGATA+TGG | 0.299496 | 5:-90044939 | MsG0580028991.01.T01:CDS |
| TTTGAAATTGAGGGAGGTTA+TGG | 0.299822 | 5:-90045076 | MsG0580028991.01.T01:CDS |
| AATGATGGGATGGGTGGTGC+TGG | 0.316086 | 5:-90044676 | MsG0580028991.01.T01:CDS |
| GAGAAGAGAGGAAGAGGGAG+AGG | 0.326670 | 5:-90045047 | MsG0580028991.01.T01:CDS |
| TTACCATCAGTATTAAGTTT+AGG | 0.332274 | 5:+90045299 | None:intergenic |
| TGGGGAGAGGGAATTGGAAT+TGG | 0.332648 | 5:-90044950 | MsG0580028991.01.T01:CDS |
| GGATGGGTGGTGCTGGATTA+GGG | 0.339968 | 5:-90044669 | MsG0580028991.01.T01:CDS |
| GAGGAAGGTGGAAGAGAAGA+TGG | 0.360691 | 5:-90044851 | MsG0580028991.01.T01:CDS |
| TCAGTATTAAGTTTAGGTTT+AGG | 0.365895 | 5:+90045305 | None:intergenic |
| GGAATGATGGGGTTATTCAT+TGG | 0.368084 | 5:-90045376 | MsG0580028991.01.T01:CDS |
| AGGAGAAAGAGGAGTGGAAA+AGG | 0.372350 | 5:-90045014 | MsG0580028991.01.T01:CDS |
| ATTGAAGAGATTGGGAGTTA+AGG | 0.379786 | 5:-90045100 | MsG0580028991.01.T01:CDS |
| AACATGCGTCATCAGTATAT+TGG | 0.382505 | 5:-90045440 | MsG0580028991.01.T01:CDS |
| AATGCAGGTTCTTGGTGTTA+TGG | 0.384156 | 5:-90044731 | MsG0580028991.01.T01:CDS |
| GATGGAGTGGAGGGAGAAGA+TGG | 0.388023 | 5:-90044818 | MsG0580028991.01.T01:CDS |
| TACTCCGAACTTCACCGTTC+AGG | 0.388339 | 5:-90045599 | MsG0580028991.01.T01:CDS |
| CATAATCAAATGCAGGTTCT+TGG | 0.399935 | 5:-90044739 | MsG0580028991.01.T01:CDS |
| GAATGATGGGGTTATTCATT+GGG | 0.402665 | 5:-90045375 | MsG0580028991.01.T01:CDS |
| GGAAGAGAAGATGGAGGAAG+AGG | 0.411440 | 5:-90044842 | MsG0580028991.01.T01:CDS |
| GGGAGTGTTGTTGTGGGGAG+AGG | 0.413036 | 5:-90044963 | MsG0580028991.01.T01:CDS |
| GAAGAAGAATTGAAGAGATT+GGG | 0.413686 | 5:-90045108 | MsG0580028991.01.T01:CDS |
| GAAGAGGAGGAGGAGGAAGG+TGG | 0.415213 | 5:-90044863 | MsG0580028991.01.T01:CDS |
| GAAGATGGAGGAAGAGGAGA+TGG | 0.423990 | 5:-90044836 | MsG0580028991.01.T01:CDS |
| GGAGAAGAGGAGGAGGAGGA+AGG | 0.434983 | 5:-90044866 | MsG0580028991.01.T01:CDS |
| TTGTTGTGGGGAGAGGGAAT+TGG | 0.442224 | 5:-90044956 | MsG0580028991.01.T01:CDS |
| TGAAGAGAGAAGAGAGGAAG+AGG | 0.442759 | 5:-90045053 | MsG0580028991.01.T01:CDS |
| TGGTTCGGGGAATGATGGGA+TGG | 0.445450 | 5:-90044686 | MsG0580028991.01.T01:CDS |
| GGAAGAGGAGATGGAGTGGA+GGG | 0.450080 | 5:-90044827 | MsG0580028991.01.T01:CDS |
| AGGAGGAGAAGAGGAGGAGG+AGG | 0.451794 | 5:-90044870 | MsG0580028991.01.T01:CDS |
| CATGGATTCAATTGGAATGA+TGG | 0.455223 | 5:-90045389 | MsG0580028991.01.T01:CDS |
| AGGAGCTTGAGGAGGAGAAG+AGG | 0.455597 | 5:-90044879 | MsG0580028991.01.T01:CDS |
| ATTGGAATTGGAGGCGATAT+GGG | 0.456138 | 5:-90044938 | MsG0580028991.01.T01:CDS |
| GGAAAAGGGGAGTGTTGTTG+TGG | 0.457194 | 5:-90044970 | MsG0580028991.01.T01:CDS |
| ATGGATTCAATTGGAATGAT+GGG | 0.466532 | 5:-90045388 | MsG0580028991.01.T01:CDS |
| ACCTGATGCTAGTTCTCCTT+CGG | 0.467837 | 5:-90044596 | MsG0580028991.01.T01:CDS |
| AGGAAGAGGAGATGGAGTGG+AGG | 0.468289 | 5:-90044828 | MsG0580028991.01.T01:CDS |
| AAGATTCAATCCAGTGATCA+TGG | 0.469707 | 5:-90045407 | MsG0580028991.01.T01:CDS |
| TTGAGGAGGAGAAGAGGAGG+AGG | 0.474734 | 5:-90044873 | MsG0580028991.01.T01:CDS |
| GAAAAGGGGAGTGTTGTTGT+GGG | 0.475875 | 5:-90044969 | MsG0580028991.01.T01:CDS |
| CAACCACCTTCCCTTTCAAA+TGG | 0.479859 | 5:-90045493 | MsG0580028991.01.T01:CDS |
| GGAGTGTTGTTGTGGGGAGA+GGG | 0.483485 | 5:-90044962 | MsG0580028991.01.T01:CDS |
| GAAGAGAGTTAGGTTAGAGA+AGG | 0.486337 | 5:-90044899 | MsG0580028991.01.T01:CDS |
| TGGAGGAAGAGGAGATGGAG+TGG | 0.487474 | 5:-90044831 | MsG0580028991.01.T01:CDS |
| CCAGTGATCATGGATTCAAT+TGG | 0.489192 | 5:-90045397 | MsG0580028991.01.T01:CDS |
| CCAATTGAATCCATGATCAC+TGG | 0.492916 | 5:+90045397 | None:intergenic |
| TGTTCCTGAACGGTGAAGTT+CGG | 0.493561 | 5:+90045595 | None:intergenic |
| TGCATCATGGTGGTGGTTTG+GGG | 0.496478 | 5:-90044627 | MsG0580028991.01.T01:CDS |
| TCGGGGAATGATGGGATGGG+TGG | 0.500258 | 5:-90044682 | MsG0580028991.01.T01:CDS |
| AGAAGAGAGGAAGAGGGAGA+GGG | 0.503467 | 5:-90045046 | MsG0580028991.01.T01:CDS |
| CATTTGAAAGGGAAGGTGGT+TGG | 0.507517 | 5:+90045494 | None:intergenic |
| AGGTGGTTGGATCGTGAAGA+TGG | 0.507853 | 5:+90045507 | None:intergenic |
| GACTCTGATGATTCTGATGA+TGG | 0.512198 | 5:-90045159 | MsG0580028991.01.T01:CDS |
| GGTTCGGGGAATGATGGGAT+GGG | 0.514502 | 5:-90044685 | MsG0580028991.01.T01:CDS |
| GAAGAGAGAAGAGAGGAAGA+GGG | 0.514578 | 5:-90045052 | MsG0580028991.01.T01:CDS |
| AGCTTGAGGAGGAGAAGAGG+AGG | 0.514591 | 5:-90044876 | MsG0580028991.01.T01:CDS |
| GGAGAGGGAATTGGAATTGG+AGG | 0.516815 | 5:-90044947 | MsG0580028991.01.T01:CDS |
| CAGGTGTTGCATCATGGTGG+TGG | 0.520118 | 5:-90044634 | MsG0580028991.01.T01:CDS |
| GGAGGCGATATGGGCGAAGA+AGG | 0.523248 | 5:-90044929 | MsG0580028991.01.T01:CDS |
| TTATGGTGAAGAGAGAAGAG+AGG | 0.532365 | 5:-90045059 | MsG0580028991.01.T01:CDS |
| GAAAGAGGAGTGGAAAAGGA+AGG | 0.534415 | 5:-90045010 | MsG0580028991.01.T01:CDS |
| GTTAGAGAAGGAGCTTGAGG+AGG | 0.535819 | 5:-90044887 | MsG0580028991.01.T01:CDS |
| CACGCCACGACCATTTGAAA+GGG | 0.537480 | 5:+90045483 | None:intergenic |
| ATTAGGGACATTGCCGACTC+AGG | 0.541810 | 5:-90044653 | MsG0580028991.01.T01:CDS |
| AAACCTAAACTTAATACTGA+TGG | 0.543548 | 5:-90045302 | MsG0580028991.01.T01:intron |
| CCTTCCCTTTCAAATGGTCG+TGG | 0.543664 | 5:-90045487 | MsG0580028991.01.T01:CDS |
| TCCGAAGGAGAACTAGCATC+AGG | 0.544284 | 5:+90044595 | None:intergenic |
| TAGGTTAGAGAAGGAGCTTG+AGG | 0.544840 | 5:-90044890 | MsG0580028991.01.T01:CDS |
| GAAGGTGGAAGAGAAGATGG+AGG | 0.560726 | 5:-90044848 | MsG0580028991.01.T01:CDS |
| TCACGCCACGACCATTTGAA+AGG | 0.565044 | 5:+90045482 | None:intergenic |
| GCGTTGACATGATCGGCGAT+TGG | 0.586294 | 5:+90045536 | None:intergenic |
| CCATGATGCAACACCTGAGT+CGG | 0.586713 | 5:+90044640 | None:intergenic |
| CCGACTCAGGTGTTGCATCA+TGG | 0.587073 | 5:-90044640 | MsG0580028991.01.T01:CDS |
| GTGAACGGCGTTGACATGAT+CGG | 0.590279 | 5:+90045529 | None:intergenic |
| GGAGTGGAGGGAGAAGATGG+TGG | 0.591696 | 5:-90044815 | MsG0580028991.01.T01:CDS |
| GGCGTGTCATAATCAAATGC+AGG | 0.593011 | 5:-90044746 | MsG0580028991.01.T01:CDS |
| CGACCATTTGAAAGGGAAGG+TGG | 0.603416 | 5:+90045490 | None:intergenic |
| GATGGTGATGATGACGGTGA+TGG | 0.605527 | 5:-90045141 | MsG0580028991.01.T01:CDS |
| GTTTAGGGAGTGTTCCTGAA+CGG | 0.611995 | 5:+90045585 | None:intergenic |
| GGCGATATGGGCGAAGAAGG+AGG | 0.625755 | 5:-90044926 | MsG0580028991.01.T01:CDS |
| TGGATTCAATTGGAATGATG+GGG | 0.630510 | 5:-90045387 | MsG0580028991.01.T01:CDS |
| AAAAGGGGAGTGTTGTTGTG+GGG | 0.631792 | 5:-90044968 | MsG0580028991.01.T01:CDS |
| CCACGACCATTTGAAAGGGA+AGG | 0.639922 | 5:+90045487 | None:intergenic |
| GATTTCTACATGAACTCCGA+AGG | 0.642098 | 5:+90044580 | None:intergenic |
| TCTGATGATGGTGATGATGA+CGG | 0.663950 | 5:-90045147 | MsG0580028991.01.T01:CDS |
| TGGATCGTGAAGATGGTGAA+CGG | 0.702008 | 5:+90045514 | None:intergenic |
| ACTCAGGTGTTGCATCATGG+TGG | 0.707815 | 5:-90044637 | MsG0580028991.01.T01:CDS |
| GATGATGCAGATGCATGCTG+AGG | 0.710436 | 5:-90044767 | MsG0580028991.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTAATTATAAACGTGTTTT+TGG | - | Chr5:90044891-90044910 | MsG0580028991.01.T01:CDS | 20.0% |
| ! | AAACCTAAACTTAATACTGA+TGG | - | Chr5:90044933-90044952 | MsG0580028991.01.T01:CDS | 25.0% |
| ! | TTACCATCAGTATTAAGTTT+AGG | + | Chr5:90044939-90044958 | None:intergenic | 25.0% |
| !! | AACTTTCTTTTTGTGACTTA+GGG | - | Chr5:90045035-90045054 | MsG0580028991.01.T01:CDS | 25.0% |
| !! | TAACTTTCTTTTTGTGACTT+AGG | - | Chr5:90045034-90045053 | MsG0580028991.01.T01:CDS | 25.0% |
| !! | TCAGTATTAAGTTTAGGTTT+AGG | + | Chr5:90044933-90044952 | None:intergenic | 25.0% |
| !!! | AGTTAAGGTTTTGAAATTGA+GGG | - | Chr5:90045150-90045169 | MsG0580028991.01.T01:CDS | 25.0% |
| !!! | TTGGTTTGAACTTTTTTTCA+CGG | + | Chr5:90044683-90044702 | None:intergenic | 25.0% |
| ATGGATTCAATTGGAATGAT+GGG | - | Chr5:90044847-90044866 | MsG0580028991.01.T01:CDS | 30.0% | |
| GAAGAAGAATTGAAGAGATT+GGG | - | Chr5:90045127-90045146 | MsG0580028991.01.T01:CDS | 30.0% | |
| TGAAGAAGAATTGAAGAGAT+TGG | - | Chr5:90045126-90045145 | MsG0580028991.01.T01:CDS | 30.0% | |
| !! | TTCGGAGTATTTTGTTAAGA+GGG | + | Chr5:90044625-90044644 | None:intergenic | 30.0% |
| !!! | AGAATACTGTGTCAGTTTTT+TGG | - | Chr5:90045529-90045548 | MsG0580028991.01.T01:CDS | 30.0% |
| !!! | GAGTTAAGGTTTTGAAATTG+AGG | - | Chr5:90045149-90045168 | MsG0580028991.01.T01:CDS | 30.0% |
| !!! | TGGTTTGAACTTTTTTTCAC+GGG | + | Chr5:90044682-90044701 | None:intergenic | 30.0% |
| AACATGCGTCATCAGTATAT+TGG | - | Chr5:90044795-90044814 | MsG0580028991.01.T01:CDS | 35.0% | |
| AAGATTCAATCCAGTGATCA+TGG | - | Chr5:90044828-90044847 | MsG0580028991.01.T01:CDS | 35.0% | |
| ATTGAAGAGATTGGGAGTTA+AGG | - | Chr5:90045135-90045154 | MsG0580028991.01.T01:CDS | 35.0% | |
| CATAATCAAATGCAGGTTCT+TGG | - | Chr5:90045496-90045515 | MsG0580028991.01.T01:CDS | 35.0% | |
| CATGGATTCAATTGGAATGA+TGG | - | Chr5:90044846-90044865 | MsG0580028991.01.T01:CDS | 35.0% | |
| TGGATTCAATTGGAATGATG+GGG | - | Chr5:90044848-90044867 | MsG0580028991.01.T01:CDS | 35.0% | |
| ! | GAATGATGGGGTTATTCATT+GGG | - | Chr5:90044860-90044879 | MsG0580028991.01.T01:CDS | 35.0% |
| ! | TTTGAAATTGAGGGAGGTTA+TGG | - | Chr5:90045159-90045178 | MsG0580028991.01.T01:CDS | 35.0% |
| !! | AAGGAATTTGAGTTTTCGAG+TGG | - | Chr5:90045244-90045263 | MsG0580028991.01.T01:intron | 35.0% |
| !! | GTTCGGAGTATTTTGTTAAG+AGG | + | Chr5:90044626-90044645 | None:intergenic | 35.0% |
| !!! | ACTGTGTCAGTTTTTTGGTT+CGG | - | Chr5:90045534-90045553 | MsG0580028991.01.T01:CDS | 35.0% |
| !!! | TAAGGTTTTGAAATTGAGGG+AGG | - | Chr5:90045153-90045172 | MsG0580028991.01.T01:CDS | 35.0% |
| !!! | TTGAGTTTTCGAGTGGAAAA+GGG | - | Chr5:90045251-90045270 | MsG0580028991.01.T01:intron | 35.0% |
| !!! | TTTCACGGGTTTTGAGTTTA+GGG | + | Chr5:90044668-90044687 | None:intergenic | 35.0% |
| !!! | TTTGAGTTTTCGAGTGGAAA+AGG | - | Chr5:90045250-90045269 | MsG0580028991.01.T01:intron | 35.0% |
| !!! | TTTTCACGGGTTTTGAGTTT+AGG | + | Chr5:90044669-90044688 | None:intergenic | 35.0% |
| AATTGGAATTGGAGGCGATA+TGG | - | Chr5:90045296-90045315 | MsG0580028991.01.T01:intron | 40.0% | |
| ATTGGAATTGGAGGCGATAT+GGG | - | Chr5:90045297-90045316 | MsG0580028991.01.T01:intron | 40.0% | |
| CCAATTGAATCCATGATCAC+TGG | + | Chr5:90044841-90044860 | None:intergenic | 40.0% | |
| CCAGTGATCATGGATTCAAT+TGG | - | Chr5:90044838-90044857 | MsG0580028991.01.T01:CDS | 40.0% | |
| GAAGAGAGTTAGGTTAGAGA+AGG | - | Chr5:90045336-90045355 | MsG0580028991.01.T01:CDS | 40.0% | |
| GACTCTGATGATTCTGATGA+TGG | - | Chr5:90045076-90045095 | MsG0580028991.01.T01:CDS | 40.0% | |
| TTATGGTGAAGAGAGAAGAG+AGG | - | Chr5:90045176-90045195 | MsG0580028991.01.T01:CDS | 40.0% | |
| ! | GGAATGATGGGGTTATTCAT+TGG | - | Chr5:90044859-90044878 | MsG0580028991.01.T01:CDS | 40.0% |
| !! | AATGCAGGTTCTTGGTGTTA+TGG | - | Chr5:90045504-90045523 | MsG0580028991.01.T01:CDS | 40.0% |
| !! | GGAGTTTTTGAAGGAGAAAG+AGG | - | Chr5:90045210-90045229 | MsG0580028991.01.T01:intron | 40.0% |
| !! | TCTGATGATGGTGATGATGA+CGG | - | Chr5:90045088-90045107 | MsG0580028991.01.T01:CDS | 40.0% |
| !! | TTTTGAAGGAGAAAGAGGAG+TGG | - | Chr5:90045215-90045234 | MsG0580028991.01.T01:intron | 40.0% |
| !!! | CTGTGTCAGTTTTTTGGTTC+GGG | - | Chr5:90045535-90045554 | MsG0580028991.01.T01:CDS | 40.0% |
| !!! | TAGTTGTTTTAGCGTGAGTC+TGG | - | Chr5:90044959-90044978 | MsG0580028991.01.T01:CDS | 40.0% |
| !!! | TGAGTTTTCGAGTGGAAAAG+GGG | - | Chr5:90045252-90045271 | MsG0580028991.01.T01:intron | 40.0% |
| !!! | TGTGTCAGTTTTTTGGTTCG+GGG | - | Chr5:90045536-90045555 | MsG0580028991.01.T01:CDS | 40.0% |
| !!! | TTTTTGGTTCGGGGAATGAT+GGG | - | Chr5:90045545-90045564 | MsG0580028991.01.T01:CDS | 40.0% |
| !!! | TTTTTTGGTTCGGGGAATGA+TGG | - | Chr5:90045544-90045563 | MsG0580028991.01.T01:CDS | 40.0% |
| AGGAGAAAGAGGAGTGGAAA+AGG | - | Chr5:90045221-90045240 | MsG0580028991.01.T01:intron | 45.0% | |
| AGGAGGTTGAGAAGAGAGTT+AGG | - | Chr5:90045326-90045345 | MsG0580028991.01.T01:CDS | 45.0% | |
| CAACCACCTTCCCTTTCAAA+TGG | - | Chr5:90044742-90044761 | MsG0580028991.01.T01:CDS | 45.0% | |
| CATTTGAAAGGGAAGGTGGT+TGG | + | Chr5:90044744-90044763 | None:intergenic | 45.0% | |
| GAAAGAGGAGTGGAAAAGGA+AGG | - | Chr5:90045225-90045244 | MsG0580028991.01.T01:intron | 45.0% | |
| GAAGAGAGAAGAGAGGAAGA+GGG | - | Chr5:90045183-90045202 | MsG0580028991.01.T01:intron | 45.0% | |
| GGCGTGTCATAATCAAATGC+AGG | - | Chr5:90045489-90045508 | MsG0580028991.01.T01:CDS | 45.0% | |
| TAGGTTAGAGAAGGAGCTTG+AGG | - | Chr5:90045345-90045364 | MsG0580028991.01.T01:CDS | 45.0% | |
| TGAAGAGAGAAGAGAGGAAG+AGG | - | Chr5:90045182-90045201 | MsG0580028991.01.T01:CDS | 45.0% | |
| TGGATCGTGAAGATGGTGAA+CGG | + | Chr5:90044724-90044743 | None:intergenic | 45.0% | |
| TGTCTGATATGTGTCGTGTC+TGG | - | Chr5:90044982-90045001 | MsG0580028991.01.T01:CDS | 45.0% | |
| TGTTCCTGAACGGTGAAGTT+CGG | + | Chr5:90044643-90044662 | None:intergenic | 45.0% | |
| ! | ACCTGATGCTAGTTCTCCTT+CGG | - | Chr5:90045639-90045658 | MsG0580028991.01.T01:CDS | 45.0% |
| !! | AAAAGGGGAGTGTTGTTGTG+GGG | - | Chr5:90045267-90045286 | MsG0580028991.01.T01:intron | 45.0% |
| !! | GAAAAGGGGAGTGTTGTTGT+GGG | - | Chr5:90045266-90045285 | MsG0580028991.01.T01:intron | 45.0% |
| !! | GTTTAGGGAGTGTTCCTGAA+CGG | + | Chr5:90044653-90044672 | None:intergenic | 45.0% |
| !! | TTGCATCATGGTGGTGGTTT+GGG | - | Chr5:90045607-90045626 | MsG0580028991.01.T01:CDS | 45.0% |
| AGAAGAGAGGAAGAGGGAGA+GGG | - | Chr5:90045189-90045208 | MsG0580028991.01.T01:intron | 50.0% | |
| AGGTGGTTGGATCGTGAAGA+TGG | + | Chr5:90044731-90044750 | None:intergenic | 50.0% | |
| CACGCCACGACCATTTGAAA+GGG | + | Chr5:90044755-90044774 | None:intergenic | 50.0% | |
| CCACGACCATTTGAAAGGGA+AGG | + | Chr5:90044751-90044770 | None:intergenic | 50.0% | |
| CCATGATGCAACACCTGAGT+CGG | + | Chr5:90045598-90045617 | None:intergenic | 50.0% | |
| CCTTCCCTTTCAAATGGTCG+TGG | - | Chr5:90044748-90044767 | MsG0580028991.01.T01:CDS | 50.0% | |
| CGACCATTTGAAAGGGAAGG+TGG | + | Chr5:90044748-90044767 | None:intergenic | 50.0% | |
| GAAGATGGAGGAAGAGGAGA+TGG | - | Chr5:90045399-90045418 | MsG0580028991.01.T01:CDS | 50.0% | |
| GAAGGTGGAAGAGAAGATGG+AGG | - | Chr5:90045387-90045406 | MsG0580028991.01.T01:CDS | 50.0% | |
| GAGGAAGGTGGAAGAGAAGA+TGG | - | Chr5:90045384-90045403 | MsG0580028991.01.T01:CDS | 50.0% | |
| GATGATGCAGATGCATGCTG+AGG | - | Chr5:90045468-90045487 | MsG0580028991.01.T01:CDS | 50.0% | |
| GGAAGAGAAGATGGAGGAAG+AGG | - | Chr5:90045393-90045412 | MsG0580028991.01.T01:CDS | 50.0% | |
| GGAGAGGGAATTGGAATTGG+AGG | - | Chr5:90045288-90045307 | MsG0580028991.01.T01:intron | 50.0% | |
| GTTAGAGAAGGAGCTTGAGG+AGG | - | Chr5:90045348-90045367 | MsG0580028991.01.T01:CDS | 50.0% | |
| TACTCCGAACTTCACCGTTC+AGG | - | Chr5:90044636-90044655 | MsG0580028991.01.T01:CDS | 50.0% | |
| TCACGCCACGACCATTTGAA+AGG | + | Chr5:90044756-90044775 | None:intergenic | 50.0% | |
| TCCGAAGGAGAACTAGCATC+AGG | + | Chr5:90045643-90045662 | None:intergenic | 50.0% | |
| TGGGGAGAGGGAATTGGAAT+TGG | - | Chr5:90045285-90045304 | MsG0580028991.01.T01:intron | 50.0% | |
| TTGTTGTGGGGAGAGGGAAT+TGG | - | Chr5:90045279-90045298 | MsG0580028991.01.T01:intron | 50.0% | |
| ! | ACTCAGGTGTTGCATCATGG+TGG | - | Chr5:90045598-90045617 | MsG0580028991.01.T01:CDS | 50.0% |
| ! | GAGGGAGAGGGAGTTTTTGA+AGG | - | Chr5:90045201-90045220 | MsG0580028991.01.T01:intron | 50.0% |
| !! | ATTAGGGACATTGCCGACTC+AGG | - | Chr5:90045582-90045601 | MsG0580028991.01.T01:CDS | 50.0% |
| !! | GATGGTGATGATGACGGTGA+TGG | - | Chr5:90045094-90045113 | MsG0580028991.01.T01:CDS | 50.0% |
| !! | GGAAAAGGGGAGTGTTGTTG+TGG | - | Chr5:90045265-90045284 | MsG0580028991.01.T01:intron | 50.0% |
| !! | GTGAACGGCGTTGACATGAT+CGG | + | Chr5:90044709-90044728 | None:intergenic | 50.0% |
| !! | GTTGCATCATGGTGGTGGTT+TGG | - | Chr5:90045606-90045625 | MsG0580028991.01.T01:CDS | 50.0% |
| !! | TGCATCATGGTGGTGGTTTG+GGG | - | Chr5:90045608-90045627 | MsG0580028991.01.T01:CDS | 50.0% |
| AGCTTGAGGAGGAGAAGAGG+AGG | - | Chr5:90045359-90045378 | MsG0580028991.01.T01:CDS | 55.0% | |
| AGGAAGAGGAGATGGAGTGG+AGG | - | Chr5:90045407-90045426 | MsG0580028991.01.T01:CDS | 55.0% | |
| AGGAGCTTGAGGAGGAGAAG+AGG | - | Chr5:90045356-90045375 | MsG0580028991.01.T01:CDS | 55.0% | |
| GAGAAGAGAGGAAGAGGGAG+AGG | - | Chr5:90045188-90045207 | MsG0580028991.01.T01:intron | 55.0% | |
| GATGGAGTGGAGGGAGAAGA+TGG | - | Chr5:90045417-90045436 | MsG0580028991.01.T01:CDS | 55.0% | |
| GGAAGAGGAGATGGAGTGGA+GGG | - | Chr5:90045408-90045427 | MsG0580028991.01.T01:CDS | 55.0% | |
| TGGAGGAAGAGGAGATGGAG+TGG | - | Chr5:90045404-90045423 | MsG0580028991.01.T01:CDS | 55.0% | |
| TTGAGGAGGAGAAGAGGAGG+AGG | - | Chr5:90045362-90045381 | MsG0580028991.01.T01:CDS | 55.0% | |
| ! | AATGATGGGATGGGTGGTGC+TGG | - | Chr5:90045559-90045578 | MsG0580028991.01.T01:CDS | 55.0% |
| ! | CAGGTGTTGCATCATGGTGG+TGG | - | Chr5:90045601-90045620 | MsG0580028991.01.T01:CDS | 55.0% |
| ! | CCGACTCAGGTGTTGCATCA+TGG | - | Chr5:90045595-90045614 | MsG0580028991.01.T01:CDS | 55.0% |
| ! | GCGTTGACATGATCGGCGAT+TGG | + | Chr5:90044702-90044721 | None:intergenic | 55.0% |
| ! | GGATGGGTGGTGCTGGATTA+GGG | - | Chr5:90045566-90045585 | MsG0580028991.01.T01:CDS | 55.0% |
| ! | GGTTCGGGGAATGATGGGAT+GGG | - | Chr5:90045550-90045569 | MsG0580028991.01.T01:CDS | 55.0% |
| ! | TGGTTCGGGGAATGATGGGA+TGG | - | Chr5:90045549-90045568 | MsG0580028991.01.T01:CDS | 55.0% |
| !! | GGAGTGTTGTTGTGGGGAGA+GGG | - | Chr5:90045273-90045292 | MsG0580028991.01.T01:intron | 55.0% |
| AGGAGGAGAAGAGGAGGAGG+AGG | - | Chr5:90045365-90045384 | MsG0580028991.01.T01:CDS | 60.0% | |
| GAAGAGGAGGAGGAGGAAGG+TGG | - | Chr5:90045372-90045391 | MsG0580028991.01.T01:CDS | 60.0% | |
| GGAGAAGAGGAGGAGGAGGA+AGG | - | Chr5:90045369-90045388 | MsG0580028991.01.T01:CDS | 60.0% | |
| GGAGGCGATATGGGCGAAGA+AGG | - | Chr5:90045306-90045325 | MsG0580028991.01.T01:CDS | 60.0% | |
| GGAGTGGAGGGAGAAGATGG+TGG | - | Chr5:90045420-90045439 | MsG0580028991.01.T01:CDS | 60.0% | |
| GGCGATATGGGCGAAGAAGG+AGG | - | Chr5:90045309-90045328 | MsG0580028991.01.T01:CDS | 60.0% | |
| ! | GGGATGGGTGGTGCTGGATT+AGG | - | Chr5:90045565-90045584 | MsG0580028991.01.T01:CDS | 60.0% |
| ! | TCGGGGAATGATGGGATGGG+TGG | - | Chr5:90045553-90045572 | MsG0580028991.01.T01:CDS | 60.0% |
| !! | GGGAGTGTTGTTGTGGGGAG+AGG | - | Chr5:90045272-90045291 | MsG0580028991.01.T01:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 90044585 | 90045672 | 90044585 | ID=MsG0580028991.01;Name=MsG0580028991.01 |
| Chr5 | mRNA | 90044585 | 90045672 | 90044585 | ID=MsG0580028991.01.T01;Parent=MsG0580028991.01;Name=MsG0580028991.01.T01;_AED=0.43;_eAED=0.43;_QI=0|0|0|1|1|1|2|0|328 |
| Chr5 | exon | 90045303 | 90045672 | 90045303 | ID=MsG0580028991.01.T01:exon:26088;Parent=MsG0580028991.01.T01 |
| Chr5 | exon | 90044585 | 90045201 | 90044585 | ID=MsG0580028991.01.T01:exon:26087;Parent=MsG0580028991.01.T01 |
| Chr5 | CDS | 90045303 | 90045672 | 90045303 | ID=MsG0580028991.01.T01:cds;Parent=MsG0580028991.01.T01 |
| Chr5 | CDS | 90044585 | 90045201 | 90044585 | ID=MsG0580028991.01.T01:cds;Parent=MsG0580028991.01.T01 |
| Gene Sequence |
| Protein sequence |
