AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021777.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021777.01.T01 MTR_4g076230 82.564 195 21 3 1 184 1 193 2.95e-104 307
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021777.01.T01 AT1G50450 60.116 173 50 4 26 185 34 200 7.88e-51 170

Find 92 sgRNAs with CRISPR-Local

Find 409 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCGAAGCTTGGCGGGAATTC+TGG 0.235826 4:+64170447 MsG0480021777.01.T01:CDS
ATCTTGAGCATTCCACTATA+TGG 0.256656 4:-64173007 None:intergenic
ACAGCCTGGGGTTTGGTTTC+CGG 0.291872 4:+64176725 MsG0480021777.01.T01:three_prime_UTR
AGAACTTCTCTTGCTTCAAT+TGG 0.303735 4:-64176887 None:intergenic
ACCTCTCAATTTGAATTTCA+AGG 0.322262 4:+64170144 MsG0480021777.01.T01:CDS
AACTGGTGCTGTTCCAAATC+TGG 0.341351 4:-64174021 None:intergenic
AGAAGCTAATATACCTCTTC+CGG 0.345459 4:-64176744 None:intergenic
CTCAAGATTGACTTTGGAAA+AGG 0.353344 4:+64173022 MsG0480021777.01.T01:CDS
TATTAATGATGTTAATTCCT+TGG 0.353552 4:+64170485 MsG0480021777.01.T01:CDS
CTCAGGGAGGTTGGTGGCGG+AGG 0.380407 4:-64170173 None:intergenic
AGAAGTGCTCATGAGATTCT+AGG 0.385631 4:+64173981 MsG0480021777.01.T01:three_prime_UTR
CAAACAACTCAAACAACCTT+TGG 0.387825 4:-64175213 None:intergenic
AACGGTCACCTTAGCTTCTC+TGG 0.399386 4:-64171989 None:intergenic
TCTTGAGCATTCCACTATAT+GGG 0.400721 4:-64173006 None:intergenic
AGGGAGGTTGGTGGCGGAGG+CGG 0.406015 4:-64170170 None:intergenic
CTCTTGTTGCGAAGCTTGGC+GGG 0.413668 4:+64170439 MsG0480021777.01.T01:CDS
GAAGCACACAGCCTGGGGTT+TGG 0.414850 4:+64176718 MsG0480021777.01.T01:three_prime_UTR
CACTTTCACTTTCTGCAGCC+CGG 0.417650 4:-64171952 None:intergenic
ATTGATTGGTTTGATGAGAT+TGG 0.419546 4:-64170106 None:intergenic
CGAGCAGTGGATGGGTTTGC+TGG 0.420015 4:+64175247 MsG0480021777.01.T01:three_prime_UTR
TTATGGCAGCAGAGCTAGTC+CGG 0.425389 4:+64171933 MsG0480021777.01.T01:CDS
TGGGGTTTGGTTTCCGGAAG+AGG 0.427541 4:+64176731 MsG0480021777.01.T01:three_prime_UTR
CCATCCACTGCTCGAACAAC+AGG 0.430649 4:-64175238 None:intergenic
TTGCAGTTACCTGTTCCTTC+CGG 0.431018 4:-64170311 None:intergenic
ATGAAGTTGGCGCCATTGAT+TGG 0.431460 4:-64170120 None:intergenic
ATTCCTGCAGTTGTTATAGC+TGG 0.434375 4:-64171672 None:intergenic
ATACCCCAATTCCAGAAAAC+TGG 0.443068 4:-64174038 None:intergenic
CCGTCCGTAAGTGCCAGATT+TGG 0.443721 4:+64174008 MsG0480021777.01.T01:three_prime_UTR
GTATTGGTTCTCGGTGGAAC+AGG 0.445764 4:+64170223 MsG0480021777.01.T01:CDS
CCAACTTCTGTCCTGACCTT+CGG 0.446350 4:+64170278 MsG0480021777.01.T01:CDS
TCAAACTGAAGCCCATATAG+TGG 0.453069 4:+64172995 MsG0480021777.01.T01:CDS
TCGTCGTCGCCGGAAGGAAC+AGG 0.453980 4:+64170302 MsG0480021777.01.T01:CDS
AACTCAAAAGTATTGGTTCT+CGG 0.454017 4:+64170214 MsG0480021777.01.T01:CDS
GGAATGCTCAAGATTGACTT+TGG 0.455694 4:+64173016 MsG0480021777.01.T01:CDS
CTCTTCATTTCTCAGTGTTG+CGG 0.458289 4:-64170076 None:intergenic
TGCAAAATCCTTCATGAGTA+AGG 0.459847 4:+64171632 MsG0480021777.01.T01:CDS
TTGCAAAGTTAATCGTTCCT+TGG 0.464230 4:-64176925 None:intergenic
GTTATATGTTTCATGGGACT+TGG 0.464929 4:+64176981 MsG0480021777.01.T01:three_prime_UTR
CCGAAGGTCAGGACAGAAGT+TGG 0.465709 4:-64170278 None:intergenic
TGTTCCAAATCTGGCACTTA+CGG 0.473084 4:-64174012 None:intergenic
TAGCTCAGGGAGGTTGGTGG+CGG 0.477422 4:-64170176 None:intergenic
CACCAACCTCCCTGAGCTAC+CGG 0.478275 4:+64170180 MsG0480021777.01.T01:CDS
GAAGCTCTTGTTGCGAAGCT+TGG 0.479889 4:+64170435 MsG0480021777.01.T01:CDS
TCAAGATTGACTTTGGAAAA+GGG 0.483974 4:+64173023 MsG0480021777.01.T01:CDS
GCTCTTGTTGCGAAGCTTGG+CGG 0.486271 4:+64170438 MsG0480021777.01.T01:CDS
CCTGTTGTTCGAGCAGTGGA+TGG 0.487904 4:+64175238 MsG0480021777.01.T01:three_prime_UTR
CTTGAAGGAAGCACACAGCC+TGG 0.489691 4:+64176711 MsG0480021777.01.T01:three_prime_UTR
GTCCGGTAGCTCAGGGAGGT+TGG 0.491652 4:-64170182 None:intergenic
GCAGTTAAAGAAATAAGATA+AGG 0.493045 4:+64170031 MsG0480021777.01.T01:five_prime_UTR
ACCTTTCAATGCAGTTTCCA+AGG 0.494123 4:-64170502 None:intergenic
GCGACGACGATCCGAAGGTC+AGG 0.496550 4:-64170289 None:intergenic
TTTGCACTAGCAGTTCTTGA+AGG 0.498155 4:+64176696 MsG0480021777.01.T01:three_prime_UTR
AAGAAAAGCCAGAGAAGCTA+AGG 0.503368 4:+64171981 MsG0480021777.01.T01:CDS
TTGAAGGAAGCACACAGCCT+GGG 0.503635 4:+64176712 MsG0480021777.01.T01:three_prime_UTR
GACCTTCGGATCGTCGTCGC+CGG 0.505033 4:+64170292 MsG0480021777.01.T01:CDS
GTAGCACCATTGCTCACTCC+AGG 0.506261 4:-64171699 None:intergenic
AGCTAACGCCTTACTCATGA+AGG 0.511652 4:-64171640 None:intergenic
CTGTTGTTCGAGCAGTGGAT+GGG 0.515105 4:+64175239 MsG0480021777.01.T01:three_prime_UTR
GAAGTTGGAGAGTGCGGTGG+CGG 0.517940 4:-64170263 None:intergenic
AAATTGAGAGGTAATGAAGT+TGG 0.520486 4:-64170133 None:intergenic
AATCCGCAACTCAAAAGTAT+TGG 0.520622 4:+64170207 MsG0480021777.01.T01:CDS
ATTCCAGCTATAACAACTGC+AGG 0.521839 4:+64171669 MsG0480021777.01.T01:CDS
CGGTAGCTCAGGGAGGTTGG+TGG 0.528656 4:-64170179 None:intergenic
AATCTCATCAAACCAATCAA+TGG 0.535310 4:+64170108 MsG0480021777.01.T01:exon
TCCTTGGAAACTGCATTGAA+AGG 0.549657 4:+64170501 MsG0480021777.01.T01:CDS
CTTCTAAAGCGTGCTAGCCA+AGG 0.553279 4:+64176908 MsG0480021777.01.T01:three_prime_UTR
GAATGATGTAACAGAGAGAA+AGG 0.567034 4:+64170411 MsG0480021777.01.T01:intron
CTCGGTGGAACAGGTCGTGT+CGG 0.567191 4:+64170232 MsG0480021777.01.T01:CDS
TTTGTTTGTAGGATAAATGA+TGG 0.567298 4:+64172945 MsG0480021777.01.T01:intron
ACCTTGAAATTCAAATTGAG+AGG 0.569589 4:-64170145 None:intergenic
TGATCCTGTTGTTCGAGCAG+TGG 0.575906 4:+64175234 MsG0480021777.01.T01:three_prime_UTR
ATATGTTTCATGGGACTTGG+TGG 0.578727 4:+64176984 MsG0480021777.01.T01:three_prime_UTR
TGTAGGATAAATGATGGTGC+TGG 0.586020 4:+64172951 MsG0480021777.01.T01:intron
TTCGGATCGTCGTCGCCGGA+AGG 0.586926 4:+64170296 MsG0480021777.01.T01:CDS
TTCCGGCGACGACGATCCGA+AGG 0.588752 4:-64170294 None:intergenic
TGAAGGAAGCACACAGCCTG+GGG 0.592250 4:+64176713 MsG0480021777.01.T01:three_prime_UTR
GCTTCAATTGGAATTCCCTG+AGG 0.612425 4:-64176875 None:intergenic
GAGACAGAAGTAAAGTCCAA+AGG 0.618187 4:+64175197 MsG0480021777.01.T01:intron
TCTTCCGGAAACCAAACCCC+AGG 0.618656 4:-64176729 None:intergenic
CCAAATCTGGCACTTACGGA+CGG 0.622468 4:-64174008 None:intergenic
GGTGGAACAGGTCGTGTCGG+AGG 0.624669 4:+64170235 MsG0480021777.01.T01:CDS
TAGCACCATTGCTCACTCCA+GGG 0.634886 4:-64171698 None:intergenic
ATATACCCTGGAGTGAGCAA+TGG 0.636189 4:+64171693 MsG0480021777.01.T01:CDS
GAACTCTAAATTCAGCCTCA+GGG 0.638689 4:+64176860 MsG0480021777.01.T01:intron
TATGGCAGCAGAGCTAGTCC+GGG 0.643798 4:+64171934 MsG0480021777.01.T01:CDS
AGGACAGAAGTTGGAGAGTG+CGG 0.645037 4:-64170269 None:intergenic
ACAGAAGTTGGAGAGTGCGG+TGG 0.648218 4:-64170266 None:intergenic
ACAACTGCAGGAATATACCC+TGG 0.656051 4:+64171681 MsG0480021777.01.T01:CDS
CTGGAGAACGTGTATCAATG+AGG 0.666395 4:+64175266 MsG0480021777.01.T01:three_prime_UTR
ATGGTGCTGGAATTTCAACT+AGG 0.668944 4:+64172964 MsG0480021777.01.T01:CDS
TCAAAAGTATTGGTTCTCGG+TGG 0.680715 4:+64170217 MsG0480021777.01.T01:CDS
TGGAGAACGTGTATCAATGA+GGG 0.699995 4:+64175267 MsG0480021777.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATGACAATAATAAAAAAA+AGG + Chr4:64170738-64170757 MsG0480021777.01.T01:intron 10.0%
!! GTAATAATAATAATAATACA+AGG - Chr4:64176165-64176184 None:intergenic 10.0%
!! TTATATAAAAAAAAACTTGT+TGG + Chr4:64173204-64173223 MsG0480021777.01.T01:intron 10.0%
!!! ATTGTCATTTTATAATATAA+AGG - Chr4:64175682-64175701 None:intergenic 10.0%
!!! ATTTTTTCATTATGATAATA+AGG + Chr4:64170839-64170858 MsG0480021777.01.T01:intron 10.0%
!!! GATTATTTTTTTCATAAAAA+AGG + Chr4:64175809-64175828 MsG0480021777.01.T01:intron 10.0%
!! AAAAATTCTAAATTATTTCG+GGG - Chr4:64176507-64176526 None:intergenic 15.0%
!! AAAACTAAAAAGAAACTATT+TGG - Chr4:64173651-64173670 None:intergenic 15.0%
!! AAATAACTTAACAAAAAAGA+AGG - Chr4:64172198-64172217 None:intergenic 15.0%
!! AAATATAATATAAGATACCT+TGG - Chr4:64171456-64171475 None:intergenic 15.0%
!! AATAACTTAACAAAAAAGAA+GGG - Chr4:64172197-64172216 None:intergenic 15.0%
!! ACATTAGTTAAATTATTGAA+GGG + Chr4:64175560-64175579 MsG0480021777.01.T01:intron 15.0%
!! CAAAAATTCTAAATTATTTC+GGG - Chr4:64176508-64176527 None:intergenic 15.0%
!! GCAAAAATTCTAAATTATTT+CGG - Chr4:64176509-64176528 None:intergenic 15.0%
!!! AAATAAGATAAGGATTTTTT+TGG + Chr4:64170041-64170060 MsG0480021777.01.T01:five_prime_UTR 15.0%
!!! ATAAAGTTCAAACTTTTAAA+TGG + Chr4:64174781-64174800 MsG0480021777.01.T01:intron 15.0%
!!! ATCTTTTGTTATGAAAATAA+CGG + Chr4:64171251-64171270 MsG0480021777.01.T01:intron 15.0%
!!! GTTGTTATTTTATAACATAA+AGG + Chr4:64175840-64175859 MsG0480021777.01.T01:intron 15.0%
!!! TAAAAAAGCAATTATTTTTC+TGG - Chr4:64176234-64176253 None:intergenic 15.0%
!!! TAAGTTTGATGAATTTTTTT+TGG + Chr4:64175779-64175798 MsG0480021777.01.T01:intron 15.0%
!!! TGCATTGTATAATATTTTAT+AGG - Chr4:64175943-64175962 None:intergenic 15.0%
!!! TTATTCATTTTATATTCTGT+TGG + Chr4:64175324-64175343 MsG0480021777.01.T01:intron 15.0%
!! AAAACAGAAGAATATGAATA+GGG - Chr4:64171724-64171743 None:intergenic 20.0%
!! AAATAATTCTAACAATGAGA+TGG - Chr4:64171747-64171766 None:intergenic 20.0%
!! AATCTAACACTATACATAAT+CGG - Chr4:64171345-64171364 None:intergenic 20.0%
!! AGTAAAATTGTATTGAGTTA+TGG + Chr4:64171831-64171850 MsG0480021777.01.T01:intron 20.0%
!! ATAACTTAACAAAAAAGAAG+GGG - Chr4:64172196-64172215 None:intergenic 20.0%
!! ATAGTAGAAATATGACAAAA+AGG - Chr4:64174899-64174918 None:intergenic 20.0%
!! ATTTAATGATGAAAACAAGT+AGG + Chr4:64174282-64174301 MsG0480021777.01.T01:intron 20.0%
!! CACATTAGTTAAATTATTGA+AGG + Chr4:64175559-64175578 MsG0480021777.01.T01:intron 20.0%
!! CATTATTATATAGAAAATGC+TGG + Chr4:64173079-64173098 MsG0480021777.01.T01:intron 20.0%
!! CTATAACATAATTGATTGAT+AGG + Chr4:64176437-64176456 MsG0480021777.01.T01:intron 20.0%
!! GTCATTACTTATTAACTAAT+TGG + Chr4:64172076-64172095 MsG0480021777.01.T01:intron 20.0%
!! GTTACCTAAAATTAAGTTAA+GGG + Chr4:64175899-64175918 MsG0480021777.01.T01:intron 20.0%
!! GTTACCTAAAATTAAGTTAA+GGG - Chr4:64175918-64175899 None:intergenic 20.0%
!! TAATTAAATCAATTTCTTGG+TGG - Chr4:64173887-64173906 None:intergenic 20.0%
!! TATTAATGATGTTAATTCCT+TGG + Chr4:64170485-64170504 MsG0480021777.01.T01:CDS 20.0%
!! TGATCTTTAACAAATATCAA+TGG - Chr4:64174985-64175004 None:intergenic 20.0%
!! TGATTGATAGGATTATAATT+GGG + Chr4:64176449-64176468 MsG0480021777.01.T01:intron 20.0%
!! TGGAAACATAAAAGTAAATT+TGG + Chr4:64175058-64175077 MsG0480021777.01.T01:intron 20.0%
!! TGGTAATTAAATCAATTTCT+TGG - Chr4:64173890-64173909 None:intergenic 20.0%
!! TGTTACCTAAAATTAAGTTA+AGG + Chr4:64175898-64175917 MsG0480021777.01.T01:intron 20.0%
!! TGTTACCTAAAATTAAGTTA+AGG - Chr4:64175917-64175898 None:intergenic 20.0%
!! TTGATTGATAGGATTATAAT+TGG + Chr4:64176448-64176467 MsG0480021777.01.T01:intron 20.0%
!!! AGTTTGTTTTGTTTCTATTT+GGG - Chr4:64172362-64172381 None:intergenic 20.0%
!!! ATTTTCAATCTTTCTTCTTT+TGG + Chr4:64176768-64176787 MsG0480021777.01.T01:intron 20.0%
!!! GTATATTTTAAGAGTATGAT+TGG + Chr4:64170567-64170586 MsG0480021777.01.T01:intron 20.0%
!!! TACATTATCATTTTGTTTGT+AGG + Chr4:64172934-64172953 MsG0480021777.01.T01:intron 20.0%
!!! TGTTTTATATACCATTGTAA+AGG + Chr4:64176024-64176043 MsG0480021777.01.T01:intron 20.0%
!!! TTATTTTCATCAGTTAATCA+TGG - Chr4:64171195-64171214 None:intergenic 20.0%
!!! TTGAGAACATATTTTAAAAG+TGG - Chr4:64173570-64173589 None:intergenic 20.0%
!!! TTGATAATCAAGTATTATCT+AGG - Chr4:64171793-64171812 None:intergenic 20.0%
!!! TTTCATTTTGAAGTGTTTTT+TGG + Chr4:64176273-64176292 MsG0480021777.01.T01:intron 20.0%
! AAAACAAACTGAAACATAGA+AGG + Chr4:64172372-64172391 MsG0480021777.01.T01:intron 25.0%
! AAACAAACTAGAAGTAGTAA+GGG + Chr4:64173136-64173155 MsG0480021777.01.T01:intron 25.0%
! ACAAAATCTCAATGTAACAT+TGG + Chr4:64174150-64174169 MsG0480021777.01.T01:intron 25.0%
! ATAACAATGAAACAATACAC+AGG - Chr4:64173339-64173358 None:intergenic 25.0%
! ATAAGATACCTTGGTATTAA+TGG - Chr4:64171447-64171466 None:intergenic 25.0%
! ATAATGCAAAATGTGAAACA+TGG + Chr4:64176320-64176339 MsG0480021777.01.T01:intron 25.0%
! ATACTACAAATTCAATATGC+TGG - Chr4:64170680-64170699 None:intergenic 25.0%
! ATGTCATACAACTCATAATA+GGG - Chr4:64174251-64174270 None:intergenic 25.0%
! ATTCAACTTTATTATGTTGC+AGG - Chr4:64175012-64175031 None:intergenic 25.0%
! CAACTACAATAAATTTGCAT+TGG - Chr4:64172052-64172071 None:intergenic 25.0%
! CTAACTTCCATAATAGATTT+CGG + Chr4:64173824-64173843 MsG0480021777.01.T01:intron 25.0%
! CTACAATTTGATCATAGTTA+TGG + Chr4:64171916-64171935 MsG0480021777.01.T01:intron 25.0%
! CTACTCAATCTATTATGAAA+TGG + Chr4:64174183-64174202 MsG0480021777.01.T01:intron 25.0%
! GAAAACAGAAGAATATGAAT+AGG - Chr4:64171725-64171744 None:intergenic 25.0%
! GATTGATAGGATTATAATTG+GGG + Chr4:64176450-64176469 MsG0480021777.01.T01:intron 25.0%
! GCAGTTAAAGAAATAAGATA+AGG + Chr4:64170031-64170050 MsG0480021777.01.T01:five_prime_UTR 25.0%
! GCATATTGAATTTGTAGTAT+TGG + Chr4:64170680-64170699 MsG0480021777.01.T01:intron 25.0%
! GTAATGTAAATGAGTTCATA+TGG - Chr4:64174698-64174717 None:intergenic 25.0%
! TAAGTAAATAAGGTCAAGTA+CGG - Chr4:64171087-64171106 None:intergenic 25.0%
! TCGTGACAAAAAAAAGATAA+AGG - Chr4:64175888-64175869 None:intergenic 25.0%
! TCTATGCAAGTAAGTAAATA+AGG - Chr4:64171097-64171116 None:intergenic 25.0%
! TGAAAAAATTGTTACCAAAC+AGG + Chr4:64170988-64171007 MsG0480021777.01.T01:intron 25.0%
! TGCATAAGTATTTAACAGTT+TGG + Chr4:64171549-64171568 MsG0480021777.01.T01:intron 25.0%
! TGTTAGAATTATTTGTTCAC+CGG + Chr4:64171753-64171772 MsG0480021777.01.T01:intron 25.0%
! TTACGTATTTCATATGTACA+TGG - Chr4:64175357-64175376 None:intergenic 25.0%
! TTTCTTAAAGTTCCTGTTAT+AGG + Chr4:64174954-64174973 MsG0480021777.01.T01:intron 25.0%
! TTTGTTTGTAGGATAAATGA+TGG + Chr4:64172945-64172964 MsG0480021777.01.T01:intron 25.0%
!! GTTCAAACTTTTAAATGGAA+CGG + Chr4:64174786-64174805 MsG0480021777.01.T01:intron 25.0%
!! TAGTCCCTTAACTTAATTTT+AGG + Chr4:64175615-64175634 MsG0480021777.01.T01:intron 25.0%
!! TAGTCCCTTAACTTAATTTT+AGG - Chr4:64175634-64175615 None:intergenic 25.0%
!! TTAAGTTTGGTAGTTTATGT+GGG - Chr4:64176080-64176099 None:intergenic 25.0%
!! TTCAAACTTTTAAATGGAAC+GGG + Chr4:64174787-64174806 MsG0480021777.01.T01:intron 25.0%
!! TTTGTCATATTTCTACTATC+AGG + Chr4:64174900-64174919 MsG0480021777.01.T01:intron 25.0%
!!! AATAATAAAAAAAAGGCACC+AGG + Chr4:64170745-64170764 MsG0480021777.01.T01:intron 25.0%
!!! AGAACATATTTTAAAAGTGG+AGG - Chr4:64173567-64173586 None:intergenic 25.0%
!!! AGAGATAACTACTTTTTTCT+AGG + Chr4:64172723-64172742 MsG0480021777.01.T01:intron 25.0%
!!! AGCTTTTGTTATATGTTTCA+TGG + Chr4:64176974-64176993 MsG0480021777.01.T01:three_prime_UTR 25.0%
!!! CAGTTTGTTTTGTTTCTATT+TGG - Chr4:64172363-64172382 None:intergenic 25.0%
!!! GAACATATTTTAAAAGTGGA+GGG - Chr4:64173566-64173585 None:intergenic 25.0%
!!! GATAGGAGATTTTTAGTTTA+AGG - Chr4:64175411-64175430 None:intergenic 25.0%
!!! GCTTTTGTTATATGTTTCAT+GGG + Chr4:64176975-64176994 MsG0480021777.01.T01:three_prime_UTR 25.0%
!!! GTTTGTTTTGTTTCTATTTG+GGG - Chr4:64172361-64172380 None:intergenic 25.0%
!!! TTTGTTTTGTTTCTATTTGG+GGG - Chr4:64172360-64172379 None:intergenic 25.0%
AAACTACAGTTCCTTTACAA+TGG - Chr4:64176038-64176057 None:intergenic 30.0%
AAATTGAGAGGTAATGAAGT+TGG - Chr4:64170136-64170155 None:intergenic 30.0%
AAATTGTAATAGTGTGTGTG+TGG + Chr4:64170389-64170408 MsG0480021777.01.T01:intron 30.0%
AATCTCATCAAACCAATCAA+TGG + Chr4:64170108-64170127 MsG0480021777.01.T01:exon 30.0%
ACAAAATAGTTACAGCACAA+AGG - Chr4:64176839-64176858 None:intergenic 30.0%
ACAACTCATAATAGGGATAA+AGG - Chr4:64174244-64174263 None:intergenic 30.0%
ACCAATTGTAATGAAAATGG+TGG - Chr4:64173440-64173459 None:intergenic 30.0%
ACCTCTCAATTTGAATTTCA+AGG + Chr4:64170144-64170163 MsG0480021777.01.T01:CDS 30.0%
ACCTGAGAAAAGAAAAAAGA+AGG - Chr4:64175527-64175546 None:intergenic 30.0%
ACCTTGAAATTCAAATTGAG+AGG - Chr4:64170148-64170167 None:intergenic 30.0%
AGCTTCACTCAAAGATATTT+CGG + Chr4:64172569-64172588 MsG0480021777.01.T01:intron 30.0%
ATATTGCTTGTTTGCAGATT+AGG + Chr4:64174103-64174122 MsG0480021777.01.T01:intron 30.0%
ATTGAGAGAAAAATAAGCTG+AGG + Chr4:64170867-64170886 MsG0480021777.01.T01:intron 30.0%
CAAACAAACTAGAAGTAGTA+AGG + Chr4:64173135-64173154 MsG0480021777.01.T01:intron 30.0%
CAATTGTAATGAAAATGGTG+GGG - Chr4:64173438-64173457 None:intergenic 30.0%
CCAATTGTAATGAAAATGGT+GGG - Chr4:64173439-64173458 None:intergenic 30.0%
CGAAATCTATTATGGAAGTT+AGG - Chr4:64173826-64173845 None:intergenic 30.0%
CTAGGTCAATTCAATATAAC+CGG - Chr4:64171775-64171794 None:intergenic 30.0%
CTGAAAACCATATATTCAAG+TGG - Chr4:64173945-64173964 None:intergenic 30.0%
CTTGCTTTCTTGAGAAATTA+AGG + Chr4:64173917-64173936 MsG0480021777.01.T01:intron 30.0%
GAAGTAGTTGCTTATAACAA+AGG + Chr4:64172867-64172886 MsG0480021777.01.T01:intron 30.0%
GATCTACAATCTTCTCTATT+TGG - Chr4:64176377-64176396 None:intergenic 30.0%
GATGAACTTATAACGAATAG+CGG + Chr4:64170649-64170668 MsG0480021777.01.T01:intron 30.0%
GATGTCATACAACTCATAAT+AGG - Chr4:64174252-64174271 None:intergenic 30.0%
GTATTAACTACCATTTACCA+TGG - Chr4:64172321-64172340 None:intergenic 30.0%
TAAGGTTCCACTTGAATATA+TGG + Chr4:64173935-64173954 MsG0480021777.01.T01:intron 30.0%
TATGACAAAAAGGATAAGAG+AGG - Chr4:64174889-64174908 None:intergenic 30.0%
TCAAGAAAGCAAGTATATAG+TGG - Chr4:64173910-64173929 None:intergenic 30.0%
TGGTAAATGGTAGTTAATAC+AGG + Chr4:64172321-64172340 MsG0480021777.01.T01:intron 30.0%
TTATAAGAGGCTAAATCAAC+AGG - Chr4:64172753-64172772 None:intergenic 30.0%
TTATGAGTTGTATGACATCA+TGG + Chr4:64174253-64174272 MsG0480021777.01.T01:intron 30.0%
! AGTTTTGCTCATTGATATTC+AGG - Chr4:64174634-64174653 None:intergenic 30.0%
! CACATTTTGCATTATGAAGA+AGG - Chr4:64176315-64176334 None:intergenic 30.0%
! CACTTGAATATATGGTTTTC+AGG + Chr4:64173943-64173962 MsG0480021777.01.T01:intron 30.0%
! CTTAAGTTTGGTAGTTTATG+TGG - Chr4:64176081-64176100 None:intergenic 30.0%
! GTTACCAAACAGGTTTATTT+TGG + Chr4:64170998-64171017 MsG0480021777.01.T01:intron 30.0%
! GTTTTGCTCATTGATATTCA+GGG - Chr4:64174633-64174652 None:intergenic 30.0%
! TCAAGATTGACTTTGGAAAA+GGG + Chr4:64173023-64173042 MsG0480021777.01.T01:CDS 30.0%
! TTTGAATCATGGTTAGTTGA+GGG - Chr4:64173119-64173138 None:intergenic 30.0%
!! AACTCAAAAGTATTGGTTCT+CGG + Chr4:64170214-64170233 MsG0480021777.01.T01:CDS 30.0%
!! ATTGATTGGTTTGATGAGAT+TGG - Chr4:64170109-64170128 None:intergenic 30.0%
!! CTTCTAGTTTGTTTGAATCA+TGG - Chr4:64173130-64173149 None:intergenic 30.0%
!!! AGCTAAAACTTATTTTGCCT+AGG - Chr4:64172655-64172674 None:intergenic 30.0%
!!! ATCTCGTTTTTTCTTTTGAG+AGG + Chr4:64174338-64174357 MsG0480021777.01.T01:intron 30.0%
!!! ATGACAAAACTTTTTTCCAG+CGG + Chr4:64174068-64174087 MsG0480021777.01.T01:intron 30.0%
!!! TCCTTCTTTTTTCTTTTCTC+AGG + Chr4:64175523-64175542 MsG0480021777.01.T01:intron 30.0%
AAAAGGATAAGAGAGGAAAG+AGG - Chr4:64174882-64174901 None:intergenic 35.0%
AAAGATTCTACGTTTCCAAG+AGG - Chr4:64172603-64172622 None:intergenic 35.0%
AAATCTCCTATCTTCTGAAC+AGG + Chr4:64175419-64175438 MsG0480021777.01.T01:intron 35.0%
AAGAAAAAAGACGAGGAATG+AGG + Chr4:64172688-64172707 MsG0480021777.01.T01:intron 35.0%
ACACTATACATAATCGGCAT+AGG - Chr4:64171339-64171358 None:intergenic 35.0%
AGAACTTCTCTTGCTTCAAT+TGG - Chr4:64176890-64176909 None:intergenic 35.0%
AGAAGCTAATATACCTCTTC+CGG - Chr4:64176747-64176766 None:intergenic 35.0%
AGATACCTTGGTATTAATGG+CGG - Chr4:64171444-64171463 None:intergenic 35.0%
ATAAGATGCAGCTTGCAATA+AGG - Chr4:64174402-64174421 None:intergenic 35.0%
ATCTTGAGCATTCCACTATA+TGG - Chr4:64173010-64173029 None:intergenic 35.0%
CAAAACATGATACTACACTG+TGG + Chr4:64175038-64175057 MsG0480021777.01.T01:intron 35.0%
CAAACAACTCAAACAACCTT+TGG - Chr4:64175216-64175235 None:intergenic 35.0%
CAATTGTTCGTGACAACTTA+TGG + Chr4:64171117-64171136 MsG0480021777.01.T01:intron 35.0%
CATGCCAAAATAAACCTGTT+TGG - Chr4:64171005-64171024 None:intergenic 35.0%
CTAGGCAGATTAATAGAAAC+AGG - Chr4:64172637-64172656 None:intergenic 35.0%
CTCATTGATATTCAGGGTTA+TGG - Chr4:64174627-64174646 None:intergenic 35.0%
CTCTTATCAACCACTAACAT+AGG + Chr4:64172541-64172560 MsG0480021777.01.T01:intron 35.0%
GAATGATGTAACAGAGAGAA+AGG + Chr4:64170411-64170430 MsG0480021777.01.T01:intron 35.0%
GATCGTAAAGAAAAAAGACG+AGG + Chr4:64172681-64172700 MsG0480021777.01.T01:intron 35.0%
GGCACCAATTGTAATGAAAA+TGG - Chr4:64173443-64173462 None:intergenic 35.0%
GTTATATGTTTCATGGGACT+TGG + Chr4:64176981-64177000 MsG0480021777.01.T01:three_prime_UTR 35.0%
TAACTACCATTTACCATGGT+TGG - Chr4:64172317-64172336 None:intergenic 35.0%
TAAGATGCAGCTTGCAATAA+GGG - Chr4:64174401-64174420 None:intergenic 35.0%
TATACTATATACCCTTGCTG+TGG - Chr4:64172398-64172417 None:intergenic 35.0%
TATTGCAAGCTGCATCTTAT+CGG + Chr4:64174402-64174421 MsG0480021777.01.T01:intron 35.0%
TCCGCTAAAAGCTTAGAAAT+TGG + Chr4:64171044-64171063 MsG0480021777.01.T01:intron 35.0%
TCTTGAGCATTCCACTATAT+GGG - Chr4:64173009-64173028 None:intergenic 35.0%
TGACTTCTGAGCTTAAATAC+AGG + Chr4:64175165-64175184 MsG0480021777.01.T01:intron 35.0%
TGCAAAATCCTTCATGAGTA+AGG + Chr4:64171632-64171651 MsG0480021777.01.T01:CDS 35.0%
TGGTTCTTTAACTCTCAATC+AGG - Chr4:64174678-64174697 None:intergenic 35.0%
TTCTGTATAATGATCAGGAG+CGG - Chr4:64172465-64172484 None:intergenic 35.0%
TTGCAAAGTTAATCGTTCCT+TGG - Chr4:64176928-64176947 None:intergenic 35.0%
! AACAGTGCCGAAATCTATTA+TGG - Chr4:64173834-64173853 None:intergenic 35.0%
! AATCCGCAACTCAAAAGTAT+TGG + Chr4:64170207-64170226 MsG0480021777.01.T01:CDS 35.0%
! CATTTTTCTGTCTGTTGGAA+AGG - Chr4:64171407-64171426 None:intergenic 35.0%
! CCCACCATTTTCATTACAAT+TGG + Chr4:64173436-64173455 MsG0480021777.01.T01:intron 35.0%
! CTCAAGATTGACTTTGGAAA+AGG + Chr4:64173022-64173041 MsG0480021777.01.T01:CDS 35.0%
! GAGTATGATTGGATTGACTT+AGG + Chr4:64170578-64170597 MsG0480021777.01.T01:intron 35.0%
! GCCAATTTCTAAGCTTTTAG+CGG - Chr4:64171048-64171067 None:intergenic 35.0%
! GGTGTTTCTGTATAATGATC+AGG - Chr4:64172470-64172489 None:intergenic 35.0%
! GTTTGAATCATGGTTAGTTG+AGG - Chr4:64173120-64173139 None:intergenic 35.0%
! TGATAAGAGTTTTGCAAGTG+TGG - Chr4:64172530-64172549 None:intergenic 35.0%
! TTGAATCATGGTTAGTTGAG+GGG - Chr4:64173118-64173137 None:intergenic 35.0%
! TTGAGAGGTATACTTAAGCT+TGG + Chr4:64174353-64174372 MsG0480021777.01.T01:intron 35.0%
!! ACTTATAACGAATAGCGGAT+AGG + Chr4:64170654-64170673 MsG0480021777.01.T01:intron 35.0%
!! ATTAGTAATGGGGGTATTCT+CGG - Chr4:64172507-64172526 None:intergenic 35.0%
!! CTGTTTCTATTAATCTGCCT+AGG + Chr4:64172635-64172654 MsG0480021777.01.T01:intron 35.0%
!! TGCAAGTGTGGATTAGTAAT+GGG - Chr4:64172518-64172537 None:intergenic 35.0%
!! TTGCAAGTGTGGATTAGTAA+TGG - Chr4:64172519-64172538 None:intergenic 35.0%
!!! AACAGGTTTATTTTGGCATG+AGG + Chr4:64171005-64171024 MsG0480021777.01.T01:intron 35.0%
!!! GAACCAATACTTTTGAGTTG+CGG - Chr4:64170213-64170232 None:intergenic 35.0%
!!! TTTTGTTTCTATTTGGGGGA+TGG - Chr4:64172356-64172375 None:intergenic 35.0%
AAAGTAGTTATCTCTGTCCG+TGG - Chr4:64172718-64172737 None:intergenic 40.0%
AAGAAAAGCCAGAGAAGCTA+AGG + Chr4:64171981-64172000 MsG0480021777.01.T01:CDS 40.0%
AAGCAGCTAAGAGGGATTAA+TGG + Chr4:64176098-64176117 MsG0480021777.01.T01:intron 40.0%
AAGCTCGTGGCTAATATAGT+TGG - Chr4:64172831-64172850 None:intergenic 40.0%
AAGCTGTTGTCCTATGTTAG+TGG - Chr4:64172554-64172573 None:intergenic 40.0%
ACAAGTAGGATAGCAAAGTC+AGG + Chr4:64174296-64174315 MsG0480021777.01.T01:intron 40.0%
ACAGACTCGATGATGACTTA+GGG - Chr4:64173749-64173768 None:intergenic 40.0%
ACCAAACTTAAGCAGCTAAG+AGG + Chr4:64176089-64176108 MsG0480021777.01.T01:intron 40.0%
ACCTTTCAATGCAGTTTCCA+AGG - Chr4:64170505-64170524 None:intergenic 40.0%
AGAGAAATCATGAGAGGCTT+TGG - Chr4:64174854-64174873 None:intergenic 40.0%
AGCCAACATTTGCAAAGCAT+AGG - Chr4:64174464-64174483 None:intergenic 40.0%
AGCCTATGCTTTGCAAATGT+TGG + Chr4:64174459-64174478 MsG0480021777.01.T01:intron 40.0%
ATACCCCAATTCCAGAAAAC+TGG - Chr4:64174041-64174060 None:intergenic 40.0%
ATATGTTTCATGGGACTTGG+TGG + Chr4:64176984-64177003 MsG0480021777.01.T01:three_prime_UTR 40.0%
ATTCCAGCTATAACAACTGC+AGG + Chr4:64171669-64171688 MsG0480021777.01.T01:CDS 40.0%
ATTCCTGCAGTTGTTATAGC+TGG - Chr4:64171675-64171694 None:intergenic 40.0%
ATTGCAAGCTGCATCTTATC+GGG + Chr4:64174403-64174422 MsG0480021777.01.T01:intron 40.0%
CATGCTGATGCTATATACTG+AGG + Chr4:64176541-64176560 MsG0480021777.01.T01:intron 40.0%
CCAAACTTAAGCAGCTAAGA+GGG + Chr4:64176090-64176109 MsG0480021777.01.T01:intron 40.0%
CCAGAACTACACAAGAGAAA+CGG - Chr4:64172010-64172029 None:intergenic 40.0%
CCTCACAAACTAGTTGATTG+CGG + Chr4:64170627-64170646 MsG0480021777.01.T01:intron 40.0%
CTCTTCATTTCTCAGTGTTG+CGG - Chr4:64170079-64170098 None:intergenic 40.0%
CTTACACTGAAAGTCTCTTG+TGG - Chr4:64175491-64175510 None:intergenic 40.0%
CTTAGCTATCTTAGCTGTCT+AGG - Chr4:64172138-64172157 None:intergenic 40.0%
GAACTCTAAATTCAGCCTCA+GGG + Chr4:64176860-64176879 MsG0480021777.01.T01:intron 40.0%
GAGAAATCATGAGAGGCTTT+GGG - Chr4:64174853-64174872 None:intergenic 40.0%
GAGACAGAAGTAAAGTCCAA+AGG + Chr4:64175197-64175216 MsG0480021777.01.T01:intron 40.0%
GAGGTATACTTAAGCTTGGT+TGG + Chr4:64174357-64174376 MsG0480021777.01.T01:intron 40.0%
GATAAGAGAGGAAAGAGGAA+GGG - Chr4:64174877-64174896 None:intergenic 40.0%
GATCAACCTGTTCAGAAGAT+AGG - Chr4:64175428-64175447 None:intergenic 40.0%
GCTTGCAATAAGGGAATCAA+AGG - Chr4:64174392-64174411 None:intergenic 40.0%
GGCTGAAAATGCCAATTGTA+TGG - Chr4:64175470-64175489 None:intergenic 40.0%
GTTGTCTAGAGAGTTTGTAC+AGG + Chr4:64172892-64172911 MsG0480021777.01.T01:intron 40.0%
TAATCGGCATAGGTCATGTT+TGG - Chr4:64171329-64171348 None:intergenic 40.0%
TAGCCTCTTATAAGCTGCTA+TGG + Chr4:64172760-64172779 MsG0480021777.01.T01:intron 40.0%
TCAAACTGAAGCCCATATAG+TGG + Chr4:64172995-64173014 MsG0480021777.01.T01:CDS 40.0%
TCAATGGTAGAGCCTATAAC+AGG - Chr4:64174969-64174988 None:intergenic 40.0%
TCCTTGGAAACTGCATTGAA+AGG + Chr4:64170501-64170520 MsG0480021777.01.T01:CDS 40.0%
TCTTCTCTATTTGGTCAACC+AGG - Chr4:64176368-64176387 None:intergenic 40.0%
TGAACTCTAAATTCAGCCTC+AGG + Chr4:64176859-64176878 MsG0480021777.01.T01:intron 40.0%
TGACCATAGCAGCTTATAAG+AGG - Chr4:64172766-64172785 None:intergenic 40.0%
TGCAGAAACTTTAGTGTACC+TGG - Chr4:64170766-64170785 None:intergenic 40.0%
TGGAGAACGTGTATCAATGA+GGG + Chr4:64175267-64175286 MsG0480021777.01.T01:three_prime_UTR 40.0%
TGTCTAGGCATATCATACGA+AGG - Chr4:64172123-64172142 None:intergenic 40.0%
TTTGCACTAGCAGTTCTTGA+AGG + Chr4:64176696-64176715 MsG0480021777.01.T01:three_prime_UTR 40.0%
! ATGGTGCTGGAATTTCAACT+AGG + Chr4:64172964-64172983 MsG0480021777.01.T01:CDS 40.0%
! CGCTACATTTTTCTGTCTGT+TGG - Chr4:64171412-64171431 None:intergenic 40.0%
! CTTAGGCACTGTTTGGTAAA+AGG + Chr4:64170595-64170614 MsG0480021777.01.T01:intron 40.0%
! GATTCAGAATGCTTCTAGCT+CGG - Chr4:64176418-64176437 None:intergenic 40.0%
! GGAATGCTCAAGATTGACTT+TGG + Chr4:64173016-64173035 MsG0480021777.01.T01:CDS 40.0%
! GTCAAGTACGGCTCAAATTT+TGG - Chr4:64171075-64171094 None:intergenic 40.0%
! GTTGATCTGGAATGTTCAAG+CGG + Chr4:64175441-64175460 MsG0480021777.01.T01:intron 40.0%
! TGAATCATGGTTAGTTGAGG+GGG - Chr4:64173117-64173136 None:intergenic 40.0%
! TGTAGGATAAATGATGGTGC+TGG + Chr4:64172951-64172970 MsG0480021777.01.T01:intron 40.0%
! TTTAAGCATTTTCCGTAGCC+TGG + Chr4:64176347-64176366 MsG0480021777.01.T01:intron 40.0%
!! AAGTCAGGCACAAGTTTTGT+AGG + Chr4:64174311-64174330 MsG0480021777.01.T01:intron 40.0%
!! AGAAGTGCTCATGAGATTCT+AGG + Chr4:64173981-64174000 MsG0480021777.01.T01:three_prime_UTR 40.0%
!! ATCTTCTGAACAGGTTGATC+TGG + Chr4:64175428-64175447 MsG0480021777.01.T01:intron 40.0%
!! CAAGTGTGGATTAGTAATGG+GGG - Chr4:64172516-64172535 None:intergenic 40.0%
!! GCAAGTGTGGATTAGTAATG+GGG - Chr4:64172517-64172536 None:intergenic 40.0%
!! TCAAAAGTATTGGTTCTCGG+TGG + Chr4:64170217-64170236 MsG0480021777.01.T01:CDS 40.0%
!!! AGCACCAGTTTTCTGGAATT+GGG + Chr4:64174034-64174053 MsG0480021777.01.T01:three_prime_UTR 40.0%
!!! AGTTTTCTGGAATTGGGGTA+TGG + Chr4:64174040-64174059 MsG0480021777.01.T01:intron 40.0%
!!! TTTGAGTTGCGGATTTTGTC+CGG - Chr4:64170202-64170221 None:intergenic 40.0%
AAACATAGAAGGCCACAGCA+AGG + Chr4:64172383-64172402 MsG0480021777.01.T01:intron 45.0%
AACAGCTAAGGATGTCAGGT+GGG - Chr4:64173373-64173392 None:intergenic 45.0%
AACATAGAAGGCCACAGCAA+GGG + Chr4:64172384-64172403 MsG0480021777.01.T01:intron 45.0%
ACAACTGCAGGAATATACCC+TGG + Chr4:64171681-64171700 MsG0480021777.01.T01:CDS 45.0%
ACAGTAATGGTGAAGGGTGA+TGG - Chr4:64173502-64173521 None:intergenic 45.0%
ACGAGGAATGAGGTTAACCA+CGG + Chr4:64172698-64172717 MsG0480021777.01.T01:intron 45.0%
AGCTAACGCCTTACTCATGA+AGG - Chr4:64171643-64171662 None:intergenic 45.0%
AGGTTCTACTACTACACAGC+TGG + Chr4:64172790-64172809 MsG0480021777.01.T01:intron 45.0%
ATATACCCTGGAGTGAGCAA+TGG + Chr4:64171693-64171712 MsG0480021777.01.T01:CDS 45.0%
ATGAAGTTGGCGCCATTGAT+TGG - Chr4:64170123-64170142 None:intergenic 45.0%
ATTTCGGTCTCTGTACCTCT+TGG + Chr4:64172585-64172604 MsG0480021777.01.T01:intron 45.0%
CACAGACTCGATGATGACTT+AGG - Chr4:64173750-64173769 None:intergenic 45.0%
CCCTCTTAGCTGCTTAAGTT+TGG - Chr4:64176093-64176112 None:intergenic 45.0%
CCGTTTCTCTTGTGTAGTTC+TGG + Chr4:64172007-64172026 MsG0480021777.01.T01:intron 45.0%
CTATTTGGTCAACCAGGCTA+CGG - Chr4:64176362-64176381 None:intergenic 45.0%
CTGATGCTATATACTGAGGC+AGG + Chr4:64176545-64176564 MsG0480021777.01.T01:intron 45.0%
CTGGAGAACGTGTATCAATG+AGG + Chr4:64175266-64175285 MsG0480021777.01.T01:three_prime_UTR 45.0%
GAACAACAGCTAAGGATGTC+AGG - Chr4:64173377-64173396 None:intergenic 45.0%
GAAGGGAGAGAAATCATGAG+AGG - Chr4:64174860-64174879 None:intergenic 45.0%
GATCTTGTAATTCATGCCGC+TGG + Chr4:64171380-64171399 MsG0480021777.01.T01:intron 45.0%
GATGGGACAGTAATGGTGAA+GGG - Chr4:64173508-64173527 None:intergenic 45.0%
GCTTCAATTGGAATTCCCTG+AGG - Chr4:64176878-64176897 None:intergenic 45.0%
GGATAAGAGAGGAAAGAGGA+AGG - Chr4:64174878-64174897 None:intergenic 45.0%
TAAGCTGCTATGGTCAACTC+AGG + Chr4:64172770-64172789 MsG0480021777.01.T01:intron 45.0%
TACTACTACACAGCTGGAAC+TGG + Chr4:64172796-64172815 MsG0480021777.01.T01:intron 45.0%
TAGTGTTAGATTGCCTCTGC+AGG + Chr4:64171353-64171372 MsG0480021777.01.T01:intron 45.0%
TATAATTGGGGCCCATACTG+AGG + Chr4:64176462-64176481 MsG0480021777.01.T01:intron 45.0%
TCATGAGCACTTCTTACCTC+TGG - Chr4:64173975-64173994 None:intergenic 45.0%
TGAAGCCGCCATTAATACCA+AGG + Chr4:64171436-64171455 MsG0480021777.01.T01:intron 45.0%
TGATGGGACAGTAATGGTGA+AGG - Chr4:64173509-64173528 None:intergenic 45.0%
TGTAGATCCTGCCTCAGTAT+GGG - Chr4:64176476-64176495 None:intergenic 45.0%
TTGCAGTTACCTGTTCCTTC+CGG - Chr4:64170314-64170333 None:intergenic 45.0%
TTGTAGATCCTGCCTCAGTA+TGG - Chr4:64176477-64176496 None:intergenic 45.0%
TTTCTGCATACGCAGAGTCT+GGG + Chr4:64170778-64170797 MsG0480021777.01.T01:intron 45.0%
! CCGCAATCAACTAGTTTGTG+AGG - Chr4:64170630-64170649 None:intergenic 45.0%
! GGACAATGATGGGACAGTAA+TGG - Chr4:64173515-64173534 None:intergenic 45.0%
! GGATTGACTTAGGCACTGTT+TGG + Chr4:64170588-64170607 MsG0480021777.01.T01:intron 45.0%
! TTGGAACAGCACCAGTTTTC+TGG + Chr4:64174027-64174046 MsG0480021777.01.T01:three_prime_UTR 45.0%
!! AATCATGAGAGGCTTTGGGT+AGG - Chr4:64174849-64174868 None:intergenic 45.0%
!! GGTTTTCAGGAATTTGCCAG+AGG + Chr4:64173956-64173975 MsG0480021777.01.T01:intron 45.0%
!! GTACGGCTCAAATTTTGGCA+AGG - Chr4:64171070-64171089 None:intergenic 45.0%
!! TTTTAAAAGTGGAGGGCGAC+AGG - Chr4:64173559-64173578 None:intergenic 45.0%
!!! CAGCACCAGTTTTCTGGAAT+TGG + Chr4:64174033-64174052 MsG0480021777.01.T01:three_prime_UTR 45.0%
!!! GCACCAGTTTTCTGGAATTG+GGG + Chr4:64174035-64174054 MsG0480021777.01.T01:three_prime_UTR 45.0%
!! ATTATTATTATTACAAAAAT+TGG + Chr4:64176171-64176190 MsG0480021777.01.T01:intron 5.0%
!! TAATAATAATAATAATACAA+GGG - Chr4:64176164-64176183 None:intergenic 5.0%
!! TATTACATATATTATAATAT+AGG + Chr4:64173861-64173880 MsG0480021777.01.T01:intron 5.0%
AACGGTCACCTTAGCTTCTC+TGG - Chr4:64171992-64172011 None:intergenic 50.0%
ACAGCTAAGGATGTCAGGTG+GGG - Chr4:64173372-64173391 None:intergenic 50.0%
ACCATTTACCATGGTTGGCG+TGG - Chr4:64172312-64172331 None:intergenic 50.0%
ACTACACAGCTGGAACTGGT+TGG + Chr4:64172800-64172819 MsG0480021777.01.T01:intron 50.0%
ACTGAGGCAGGATCTACAAC+AGG + Chr4:64176478-64176497 MsG0480021777.01.T01:intron 50.0%
AGCGGTTACTTACTGGTGTG+GGG - Chr4:64172447-64172466 None:intergenic 50.0%
AGGACAGAAGTTGGAGAGTG+CGG - Chr4:64170272-64170291 None:intergenic 50.0%
ATATCCAAGTGACTCACCGC+TGG - Chr4:64174087-64174106 None:intergenic 50.0%
CAACAGCTAAGGATGTCAGG+TGG - Chr4:64173374-64173393 None:intergenic 50.0%
CACTTTCACTTTCTGCAGCC+CGG - Chr4:64171955-64171974 None:intergenic 50.0%
CCAACTTCTGTCCTGACCTT+CGG + Chr4:64170278-64170297 MsG0480021777.01.T01:CDS 50.0%
CTACACAGCTGGAACTGGTT+GGG + Chr4:64172801-64172820 MsG0480021777.01.T01:intron 50.0%
CTGAGGCAGGATCTACAACA+GGG + Chr4:64176479-64176498 MsG0480021777.01.T01:intron 50.0%
CTGTTGTTCGAGCAGTGGAT+GGG + Chr4:64175239-64175258 MsG0480021777.01.T01:three_prime_UTR 50.0%
GAAGCTCTTGTTGCGAAGCT+TGG + Chr4:64170435-64170454 MsG0480021777.01.T01:CDS 50.0%
GAGCGGTTACTTACTGGTGT+GGG - Chr4:64172448-64172467 None:intergenic 50.0%
GATCAGGAGCGGTTACTTAC+TGG - Chr4:64172454-64172473 None:intergenic 50.0%
GCTGCATCTTATCGGGCAAT+TGG + Chr4:64174410-64174429 MsG0480021777.01.T01:intron 50.0%
GTGTCGGAGAACAACAGCTA+AGG - Chr4:64173385-64173404 None:intergenic 50.0%
GTTTCTGCATACGCAGAGTC+TGG + Chr4:64170777-64170796 MsG0480021777.01.T01:intron 50.0%
TACAAGATCCACACCTGCAG+AGG - Chr4:64171369-64171388 None:intergenic 50.0%
TAGCACCATTGCTCACTCCA+GGG - Chr4:64171701-64171720 None:intergenic 50.0%
TCAAGCGGACGCCATACAAT+TGG + Chr4:64175456-64175475 MsG0480021777.01.T01:intron 50.0%
TCCACGCCAACCATGGTAAA+TGG + Chr4:64172308-64172327 MsG0480021777.01.T01:intron 50.0%
TGAGGCAGGATCTACAACAG+GGG + Chr4:64176480-64176499 MsG0480021777.01.T01:intron 50.0%
TGATCCTGTTGTTCGAGCAG+TGG + Chr4:64175234-64175253 MsG0480021777.01.T01:three_prime_UTR 50.0%
TGTCTGTTGGAAAGGACCAG+CGG - Chr4:64171399-64171418 None:intergenic 50.0%
TTAGATTGCCTCTGCAGGTG+TGG + Chr4:64171358-64171377 MsG0480021777.01.T01:intron 50.0%
TTATGGCAGCAGAGCTAGTC+CGG + Chr4:64171933-64171952 MsG0480021777.01.T01:CDS 50.0%
TTCTCGGAGGTGGAAGGAAT+TGG - Chr4:64172491-64172510 None:intergenic 50.0%
! GGATTTTGTCCGGTAGCTCA+GGG - Chr4:64170192-64170211 None:intergenic 50.0%
! TAGTGGCAATGGTGGAGTGT+CGG - Chr4:64173401-64173420 None:intergenic 50.0%
! TTGAAGGAAGCACACAGCCT+GGG + Chr4:64176712-64176731 MsG0480021777.01.T01:three_prime_UTR 50.0%
! TTTTCCAGCGGTGAGTCACT+TGG + Chr4:64174080-64174099 MsG0480021777.01.T01:intron 50.0%
!! AGTAATGGGGGTATTCTCGG+AGG - Chr4:64172504-64172523 None:intergenic 50.0%
!! ATGCTTCTAGCTCGGTCTTG+TGG - Chr4:64176410-64176429 None:intergenic 50.0%
!! CTTCTAAAGCGTGCTAGCCA+AGG + Chr4:64176908-64176927 MsG0480021777.01.T01:three_prime_UTR 50.0%
!! GTATTGGTTCTCGGTGGAAC+AGG + Chr4:64170223-64170242 MsG0480021777.01.T01:CDS 50.0%
!! TGAAAATGGTGGGGAGTACC+TGG - Chr4:64173429-64173448 None:intergenic 50.0%
!! TGCTTCTAGCTCGGTCTTGT+GGG - Chr4:64176409-64176428 None:intergenic 50.0%
!!! CTGGTGTGGGGTTTTGTTCT+TGG - Chr4:64172435-64172454 None:intergenic 50.0%
CCATCCACTGCTCGAACAAC+AGG - Chr4:64175241-64175260 None:intergenic 55.0%
CCGAAGGTCAGGACAGAAGT+TGG - Chr4:64170281-64170300 None:intergenic 55.0%
CCTGTTGTTCGAGCAGTGGA+TGG + Chr4:64175238-64175257 MsG0480021777.01.T01:three_prime_UTR 55.0%
CTCTTGTTGCGAAGCTTGGC+GGG + Chr4:64170439-64170458 MsG0480021777.01.T01:CDS 55.0%
GCTCTTGTTGCGAAGCTTGG+CGG + Chr4:64170438-64170457 MsG0480021777.01.T01:CDS 55.0%
GGAGCGGTTACTTACTGGTG+TGG - Chr4:64172449-64172468 None:intergenic 55.0%
GTAGCACCATTGCTCACTCC+AGG - Chr4:64171702-64171721 None:intergenic 55.0%
TAAAAGTGGAGGGCGACAGG+TGG - Chr4:64173556-64173575 None:intergenic 55.0%
TATGGCAGCAGAGCTAGTCC+GGG + Chr4:64171934-64171953 MsG0480021777.01.T01:CDS 55.0%
TCCCAACAGCAAGAAGCTCG+TGG - Chr4:64172844-64172863 None:intergenic 55.0%
TCTTCCGGAAACCAAACCCC+AGG - Chr4:64176732-64176751 None:intergenic 55.0%
TGGAGAGGAAACGGCAGTGT+CGG - Chr4:64173536-64173555 None:intergenic 55.0%
! ACAGAAGTTGGAGAGTGCGG+TGG - Chr4:64170269-64170288 None:intergenic 55.0%
! ACAGCCTGGGGTTTGGTTTC+CGG + Chr4:64176725-64176744 MsG0480021777.01.T01:three_prime_UTR 55.0%
! ACGGCAGTGTCGGACAATGA+TGG - Chr4:64173526-64173545 None:intergenic 55.0%
! AGCCACGAGCTTCTTGCTGT+TGG + Chr4:64172839-64172858 MsG0480021777.01.T01:intron 55.0%
! CGGATTTTGTCCGGTAGCTC+AGG - Chr4:64170193-64170212 None:intergenic 55.0%
! CGGCAGTGTCGGACAATGAT+GGG - Chr4:64173525-64173544 None:intergenic 55.0%
! CTCGGTCTTGTGGGTCTTTG+CGG - Chr4:64176400-64176419 None:intergenic 55.0%
! CTTGAAGGAAGCACACAGCC+TGG + Chr4:64176711-64176730 MsG0480021777.01.T01:three_prime_UTR 55.0%
! TCGGTCTTGTGGGTCTTTGC+GGG - Chr4:64176399-64176418 None:intergenic 55.0%
! TGAAGGAAGCACACAGCCTG+GGG + Chr4:64176713-64176732 MsG0480021777.01.T01:three_prime_UTR 55.0%
! TGGGGTTTGGTTTCCGGAAG+AGG + Chr4:64176731-64176750 MsG0480021777.01.T01:three_prime_UTR 55.0%
! TTTTGTCCGGTAGCTCAGGG+AGG - Chr4:64170189-64170208 None:intergenic 55.0%
!! AAATGGTGGGGAGTACCTGG+CGG - Chr4:64173426-64173445 None:intergenic 55.0%
!! AATGGGGGTATTCTCGGAGG+TGG - Chr4:64172501-64172520 None:intergenic 55.0%
!! CATGAGAGGCTTTGGGTAGG+AGG - Chr4:64174846-64174865 None:intergenic 55.0%
!! GAGCTTCTTGCTGTTGGGAG+AGG + Chr4:64172845-64172864 MsG0480021777.01.T01:intron 55.0%
!! GCCACGAGCTTCTTGCTGTT+GGG + Chr4:64172840-64172859 MsG0480021777.01.T01:intron 55.0%
!! TGGTGAAGGGTGATGGACAG+CGG - Chr4:64173495-64173514 None:intergenic 55.0%
ACAGCTGGAACTGGTTGGGC+TGG + Chr4:64172805-64172824 MsG0480021777.01.T01:intron 60.0%
AGACGAGTCCACGCCAACCA+TGG + Chr4:64172301-64172320 MsG0480021777.01.T01:intron 60.0%
ATTGGGGCCCATACTGAGGC+AGG + Chr4:64176466-64176485 MsG0480021777.01.T01:intron 60.0%
CACCAACCTCCCTGAGCTAC+CGG + Chr4:64170180-64170199 MsG0480021777.01.T01:CDS 60.0%
CTCGGTGGAACAGGTCGTGT+CGG + Chr4:64170232-64170251 MsG0480021777.01.T01:CDS 60.0%
GAAGCACACAGCCTGGGGTT+TGG + Chr4:64176718-64176737 MsG0480021777.01.T01:three_prime_UTR 60.0%
GCGAAGCTTGGCGGGAATTC+TGG + Chr4:64170447-64170466 MsG0480021777.01.T01:CDS 60.0%
GCGTGGACTCGTCTTGAGTC+AGG - Chr4:64172295-64172314 None:intergenic 60.0%
GGCGACAGGTGGAGAGGAAA+CGG - Chr4:64173545-64173564 None:intergenic 60.0%
! AGCGGCTGCATTGACAGCAG+CGG - Chr4:64173477-64173496 None:intergenic 60.0%
! CGAGCAGTGGATGGGTTTGC+TGG + Chr4:64175247-64175266 MsG0480021777.01.T01:three_prime_UTR 60.0%
! GAAGTTGGAGAGTGCGGTGG+CGG - Chr4:64170266-64170285 None:intergenic 60.0%
! GGGGTATTCTCGGAGGTGGA+AGG - Chr4:64172497-64172516 None:intergenic 60.0%
! TGCATTGACAGCAGCGGTGG+AGG - Chr4:64173471-64173490 None:intergenic 60.0%
!! TAGCTCAGGGAGGTTGGTGG+CGG - Chr4:64170179-64170198 None:intergenic 60.0%
ACCATTGCCACTACGCCGCC+AGG + Chr4:64173408-64173427 MsG0480021777.01.T01:intron 65.0%
ACCTGGCGGCGTAGTGGCAA+TGG - Chr4:64173412-64173431 None:intergenic 65.0%
CGGTAGCTCAGGGAGGTTGG+TGG - Chr4:64170182-64170201 None:intergenic 65.0%
GACCTTCGGATCGTCGTCGC+CGG + Chr4:64170292-64170311 MsG0480021777.01.T01:CDS 65.0%
GCGACGACGATCCGAAGGTC+AGG - Chr4:64170292-64170311 None:intergenic 65.0%
GGTGGAACAGGTCGTGTCGG+AGG + Chr4:64170235-64170254 MsG0480021777.01.T01:CDS 65.0%
GTCCGGTAGCTCAGGGAGGT+TGG - Chr4:64170185-64170204 None:intergenic 65.0%
TCGTCGTCGCCGGAAGGAAC+AGG + Chr4:64170302-64170321 MsG0480021777.01.T01:CDS 65.0%
TGGCGGCGTAGTGGCAATGG+TGG - Chr4:64173409-64173428 None:intergenic 65.0%
TTCCGGCGACGACGATCCGA+AGG - Chr4:64170297-64170316 None:intergenic 65.0%
TTCGGATCGTCGTCGCCGGA+AGG + Chr4:64170296-64170315 MsG0480021777.01.T01:CDS 65.0%
TTGACAGCAGCGGTGGAGGC+AGG - Chr4:64173467-64173486 None:intergenic 65.0%
! GGCTGCATTGACAGCAGCGG+TGG - Chr4:64173474-64173493 None:intergenic 65.0%
ACAGCAGCGGTGGAGGCAGG+TGG - Chr4:64173464-64173483 None:intergenic 70.0%
GTGGAGGGCGACAGGTGGAG+AGG - Chr4:64173551-64173570 None:intergenic 70.0%
!! AGGGAGGTTGGTGGCGGAGG+CGG - Chr4:64170173-64170192 None:intergenic 70.0%
!! CTCAGGGAGGTTGGTGGCGG+AGG - Chr4:64170176-64170195 None:intergenic 70.0%
!! GGGAGTACCTGGCGGCGTAG+TGG - Chr4:64173418-64173437 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 64170024 64177021 64170024 ID=MsG0480021777.01;Name=MsG0480021777.01
Chr4 mRNA 64170024 64177021 64170024 ID=MsG0480021777.01.T01;Parent=MsG0480021777.01;Name=MsG0480021777.01.T01;_AED=0.49;_eAED=0.62;_QI=103|0.37|0.44|1|1|1|9|396|221
Chr4 exon 64170024 64170323 64170024 ID=MsG0480021777.01.T01:exon:17847;Parent=MsG0480021777.01.T01
Chr4 exon 64170425 64170579 64170425 ID=MsG0480021777.01.T01:exon:17848;Parent=MsG0480021777.01.T01
Chr4 exon 64171589 64171714 64171589 ID=MsG0480021777.01.T01:exon:17849;Parent=MsG0480021777.01.T01
Chr4 exon 64171933 64172002 64171933 ID=MsG0480021777.01.T01:exon:17850;Parent=MsG0480021777.01.T01
Chr4 exon 64172956 64173071 64172956 ID=MsG0480021777.01.T01:exon:17851;Parent=MsG0480021777.01.T01
Chr4 exon 64173976 64174056 64173976 ID=MsG0480021777.01.T01:exon:17852;Parent=MsG0480021777.01.T01
Chr4 exon 64175200 64175288 64175200 ID=MsG0480021777.01.T01:exon:17853;Parent=MsG0480021777.01.T01
Chr4 exon 64176672 64176752 64176672 ID=MsG0480021777.01.T01:exon:17854;Parent=MsG0480021777.01.T01
Chr4 exon 64176875 64177021 64176875 ID=MsG0480021777.01.T01:exon:17855;Parent=MsG0480021777.01.T01
Chr4 five_prime_UTR 64170024 64170126 64170024 ID=MsG0480021777.01.T01:five_prime_utr;Parent=MsG0480021777.01.T01
Chr4 CDS 64170127 64170323 64170127 ID=MsG0480021777.01.T01:cds;Parent=MsG0480021777.01.T01
Chr4 CDS 64170425 64170579 64170425 ID=MsG0480021777.01.T01:cds;Parent=MsG0480021777.01.T01
Chr4 CDS 64171589 64171714 64171589 ID=MsG0480021777.01.T01:cds;Parent=MsG0480021777.01.T01
Chr4 CDS 64171933 64172002 64171933 ID=MsG0480021777.01.T01:cds;Parent=MsG0480021777.01.T01
Chr4 CDS 64172956 64173071 64172956 ID=MsG0480021777.01.T01:cds;Parent=MsG0480021777.01.T01
Chr4 CDS 64173976 64173977 64173976 ID=MsG0480021777.01.T01:cds;Parent=MsG0480021777.01.T01
Chr4 three_prime_UTR 64173978 64174056 64173978 ID=MsG0480021777.01.T01:three_prime_utr;Parent=MsG0480021777.01.T01
Chr4 three_prime_UTR 64175200 64175288 64175200 ID=MsG0480021777.01.T01:three_prime_utr;Parent=MsG0480021777.01.T01
Chr4 three_prime_UTR 64176672 64176752 64176672 ID=MsG0480021777.01.T01:three_prime_utr;Parent=MsG0480021777.01.T01
Chr4 three_prime_UTR 64176875 64177021 64176875 ID=MsG0480021777.01.T01:three_prime_utr;Parent=MsG0480021777.01.T01
Gene Sequence

>MsG0480021777.01.T01

ATGGCGCCAACTTCATTACCTCTCAATTTGAATTTCAAGGTAACCGCCTCCGCCACCAACCTCCCTGAGCTACCGGACAAAATCCGCAACTCAAAAGTATTGGTTCTCGGTGGAACAGGTCGTGTCGGAGGATCAACCGCCACCGCACTCTCCAACTTCTGTCCTGACCTTCGGATCGTCGTCGCCGGAAGGAACAGAGAGAAAGGTGAAGCTCTTGTTGCGAAGCTTGGCGGGAATTCTGGTTTCGCACGTGTTGATATTAATGATGTTAATTCCTTGGAAACTGCATTGAAAGGTGAAATTTTTGATTTCAATCTGAACTTTTGTTATCTGCTTCGTGTATATTTTAAGAACTGCATATATGATGTATGTGACGACACAGACTATTCACAGCGTGCAAAATCCTTCATGAGTAAGGCGTTAGCTGCAAATATTCCAGCTATAACAACTGCAGGAATATACCCTGGAGTGAGCAATGTTATGGCAGCAGAGCTAGTCCGGGCTGCAGAAAGTGAAAGTGAAAGTGAAGAAAAGCCAGAGAAGCTAAGGATAAATGATGGTGCTGGAATTTCAACTAGGAGAGAAGATCAAACTGAAGCCCATATAGTGGAATGCTCAAGATTGACTTTGGAAAAGGGATCAACAAAAGAGATGTTTATCTGCTAG

Protein sequence

>MsG0480021777.01.T01

MAPTSLPLNLNFKVTASATNLPELPDKIRNSKVLVLGGTGRVGGSTATALSNFCPDLRIVVAGRNREKGEALVAKLGGNSGFARVDINDVNSLETALKGEIFDFNLNFCYLLRVYFKNCIYDVCDDTDYSQRAKSFMSKALAANIPAITTAGIYPGVSNVMAAELVRAAESESESEEKPEKLRINDGAGISTRREDQTEAHIVECSRLTLEKGSTKEMFIC*