AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180003986.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003986.01.T01 MTR_1g072270 94.924 926 34 2 1 925 1 914 0.0 1709
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003986.01.T01 AT1G03160 55.011 918 386 11 12 925 12 906 0.0 991
MsG0180003986.01.T01 AT1G03160 52.723 918 378 12 12 925 12 877 0.0 927
MsG0180003986.01.T01 AT1G03160 56.276 709 283 11 12 716 12 697 0.0 764
MsG0180003986.01.T01 AT1G03160 56.958 697 273 11 12 704 12 685 0.0 757

Find 232 sgRNAs with CRISPR-Local

Find 558 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGGGTTGGGCTTGGGCCTT+AGG 0.173153 1:-71391854 None:intergenic
GACTGAAGCAGTAGAAAATT+TGG 0.183151 1:+71396874 MsG0180003986.01.T01:CDS
GATTGATGAGCCGTTCTTAT+TGG 0.190307 1:+71392905 MsG0180003986.01.T01:CDS
TACTTGGAGATTACGAAAAT+TGG 0.200895 1:+71395313 MsG0180003986.01.T01:CDS
CTCAGGACACATGAAGATTT+TGG 0.203758 1:-71397024 None:intergenic
TTCTAGGTTGGGGTTGGGCT+TGG 0.205567 1:-71391862 None:intergenic
GTTACTAGTTTGGAAAGTTT+TGG 0.211804 1:+71392475 MsG0180003986.01.T01:CDS
CTTATGGCTACCTCTAGTTT+TGG 0.219944 1:+71394473 MsG0180003986.01.T01:CDS
CTCAAGCTCGTAAAAGCTAT+TGG 0.253669 1:-71394540 None:intergenic
TCCTTCTGTGTCATCTGTTC+AGG 0.271301 1:+71395047 MsG0180003986.01.T01:CDS
CATACCTCACTTCCAGTTAA+AGG 0.273809 1:-71393929 None:intergenic
ATTAATGATTTCCTGGAATA+GGG 0.274023 1:-71397170 None:intergenic
GGAGAGGAGGGAGGGAGATA+TGG 0.274707 1:-71391626 None:intergenic
GCTTTGAGTTTACTTGCTTC+TGG 0.276623 1:+71392439 MsG0180003986.01.T01:CDS
TTCATGTGTCCTGAGTTCTT+TGG 0.283565 1:+71397032 MsG0180003986.01.T01:exon
ACTGTGATTAATGCGCTTCT+TGG 0.287328 1:+71393535 MsG0180003986.01.T01:CDS
TCATGTGTCCTGAGTTCTTT+GGG 0.289607 1:+71397033 MsG0180003986.01.T01:exon
CCTTGTATATTCTCCCTTGT+TGG 0.292272 1:-71395353 None:intergenic
GATTTGTTAAACTGGAAGAT+AGG 0.296689 1:+71392647 MsG0180003986.01.T01:CDS
GGAAGCAATGTCCTTCATTA+AGG 0.301311 1:+71394373 MsG0180003986.01.T01:CDS
TCTAGGTTGGGGTTGGGCTT+GGG 0.305822 1:-71391861 None:intergenic
AATCACAATTCCAACCGATT+TGG 0.321017 1:-71392008 None:intergenic
CTCCACAACACGTGATTTAG+TGG 0.321750 1:-71394911 None:intergenic
TTGGAAGATCTTCTTGCTCT+TGG 0.322078 1:+71396532 MsG0180003986.01.T01:CDS
TGACTTACTTCTCTAAGAAT+TGG 0.324069 1:-71393691 None:intergenic
TTCAGTCAAATCCCTCTTCA+TGG 0.324417 1:-71396858 None:intergenic
TGGAAAATGAGAGCCTTTCT+TGG 0.326351 1:+71394765 MsG0180003986.01.T01:CDS
CGTAACAAAATTAATAAATA+AGG 0.326840 1:+71391394 MsG0180003986.01.T01:five_prime_UTR
GGGGTGAAGAAGGGAGTAGG+TGG 0.327316 1:-71391724 None:intergenic
TGTTATCTAAACTAATCTTT+TGG 0.330536 1:-71391568 None:intergenic
GATTAATGATTTCCTGGAAT+AGG 0.331902 1:-71397171 None:intergenic
TTATATGATTAATGATTTCC+TGG 0.345972 1:-71397177 None:intergenic
TCAGCTGATCGCCCTTTAAC+TGG 0.347584 1:+71393917 MsG0180003986.01.T01:CDS
GGAGAAACAGTTAATAGAAA+TGG 0.348551 1:+71392669 MsG0180003986.01.T01:CDS
CTTGTATATTCTCCCTTGTT+GGG 0.350679 1:-71395352 None:intergenic
TGCTCTTGAAGCAAAACTTA+TGG 0.354047 1:+71394457 MsG0180003986.01.T01:CDS
CCGCCGGGGAAGAGTGTTCT+AGG 0.356851 1:-71391878 None:intergenic
TCAGTCTCTGGTTCTCAATA+TGG 0.360347 1:+71394515 MsG0180003986.01.T01:CDS
GATACCTTTGTGAGAGTCAT+TGG 0.361581 1:+71396896 MsG0180003986.01.T01:CDS
TGAAGAATTACATTAGTTCC+AGG 0.368480 1:-71393833 None:intergenic
TCGATATGCCAAGCAGGATT+TGG 0.369694 1:+71394694 MsG0180003986.01.T01:CDS
GAGTGTTCTAGGTTGGGGTT+GGG 0.371217 1:-71391867 None:intergenic
GAAATGGCGAGAAACATTAT+TGG 0.371244 1:-71391828 None:intergenic
AGGGGATCAAGCTGGCTATC+AGG 0.372164 1:+71395455 MsG0180003986.01.T01:CDS
ATGGTAGGGAGGGGTGAAGA+AGG 0.377317 1:-71391734 None:intergenic
TAGAGTGGGGACTTTGAGTT+CGG 0.381477 1:-71391912 None:intergenic
GGGTGTAAGGGATGGTAGGG+AGG 0.382689 1:-71391745 None:intergenic
AGGTGTGGATAGCGAGAGAA+GGG 0.383193 1:-71391767 None:intergenic
AGAAGGGGTTGTTATGGAAC+AGG 0.385359 1:-71391693 None:intergenic
GTTGCTAGGAATACAATGTT+AGG 0.385672 1:+71392196 MsG0180003986.01.T01:CDS
TGTGGGTGGATTTGTTAAAC+TGG 0.386432 1:+71392639 MsG0180003986.01.T01:CDS
TCAAGCTCGTAAAAGCTATT+GGG 0.388699 1:-71394539 None:intergenic
GCCTATTCTGCGCTTGATCT+TGG 0.389498 1:-71396928 None:intergenic
AGAGTGTTCTAGGTTGGGGT+TGG 0.393889 1:-71391868 None:intergenic
AGAGTGGGGACTTTGAGTTC+GGG 0.396344 1:-71391911 None:intergenic
GGGGAAGAGTGTTCTAGGTT+GGG 0.396579 1:-71391873 None:intergenic
GAATGGAGAGTGCGGCGAAA+AGG 0.399526 1:-71391791 None:intergenic
AAGAACCACCAATTCGCTAT+TGG 0.400572 1:-71392221 None:intergenic
GGAATAAGAAGGGGTTGTTA+TGG 0.401637 1:-71391699 None:intergenic
CTTTATGTTGTCCTTAATGA+AGG 0.405933 1:-71394384 None:intergenic
TAGCAAATATATTGACCATC+TGG 0.411722 1:-71393658 None:intergenic
ATGTCCTTGAACCCTATTCC+AGG 0.418990 1:+71397159 MsG0180003986.01.T01:three_prime_UTR
CGAATTGGTGGTTCTTCCAT+TGG 0.431065 1:+71392228 MsG0180003986.01.T01:CDS
ATAGTAAACATTATTTCAAA+AGG 0.431471 1:+71397297 MsG0180003986.01.T01:three_prime_UTR
GAAAGAAGGGAGAGGAGGGA+GGG 0.431825 1:-71391634 None:intergenic
AGTAGGTGGGAGGAATAAGA+AGG 0.433949 1:-71391710 None:intergenic
TTCGGGGCGTTTGTAACCGC+CGG 0.438088 1:-71391894 None:intergenic
GCTCTTGGAATTTGTTCTGT+TGG 0.439392 1:+71396547 MsG0180003986.01.T01:CDS
TTCGTAAATTATTTGATGGT+GGG 0.440847 1:+71392518 MsG0180003986.01.T01:CDS
TGATAAAGCAGTTTCCAAAT+CGG 0.442591 1:+71391994 MsG0180003986.01.T01:CDS
AGAAAGAAGGGAGAGGAGGG+AGG 0.444007 1:-71391635 None:intergenic
CATATGAGTTGCTAAAGAAA+GGG 0.444121 1:+71395436 MsG0180003986.01.T01:CDS
GGGGTTGGGCTTGGGCCTTA+GGG 0.445279 1:-71391853 None:intergenic
GAGGTGTGGATAGCGAGAGA+AGG 0.445791 1:-71391768 None:intergenic
GATAGAAAGAAGGGAGAGGA+GGG 0.451930 1:-71391638 None:intergenic
CTAGATGGGTCGACGATCGC+AGG 0.455498 1:+71394581 MsG0180003986.01.T01:CDS
CTTCGTAAATTATTTGATGG+TGG 0.456739 1:+71392517 MsG0180003986.01.T01:CDS
GCAGAGTATAACAGAGGTTG+TGG 0.456855 1:+71392621 MsG0180003986.01.T01:CDS
TTCTGAATTCTTGAGGTGGC+AGG 0.456958 1:-71395012 None:intergenic
GAGTTTGTTTCCTCCAAGAA+AGG 0.457846 1:-71394778 None:intergenic
AACGAAGAATTGTCAGTCTC+TGG 0.458078 1:+71394503 MsG0180003986.01.T01:CDS
GGGGAATGAAGATAGAAAGA+AGG 0.458157 1:-71391648 None:intergenic
TGAAGAAGGGAGTAGGTGGG+AGG 0.458490 1:-71391720 None:intergenic
ATACCTCACTTCCAGTTAAA+GGG 0.459106 1:-71393928 None:intergenic
GTTAGGTTCCAATAGCGAAT+TGG 0.463663 1:+71392213 MsG0180003986.01.T01:CDS
TTCTCGCCATTTCTTCCCTA+AGG 0.464182 1:+71391838 MsG0180003986.01.T01:CDS
TTGCTTCGTAAATTATTTGA+TGG 0.465054 1:+71392514 MsG0180003986.01.T01:CDS
GCCGTTCTTATTGGTTATAG+TGG 0.467686 1:+71392914 MsG0180003986.01.T01:CDS
AAATAAGGATGGGTGAGAAT+AGG 0.468203 1:+71391409 MsG0180003986.01.T01:five_prime_UTR
TATAAAGAAAGCTGCACCTC+TGG 0.469112 1:+71392723 MsG0180003986.01.T01:CDS
ACATATGAGTTGCTAAAGAA+AGG 0.469855 1:+71395435 MsG0180003986.01.T01:CDS
CTTATATATGGTGGTGGTGG+TGG 0.469889 1:+71392316 MsG0180003986.01.T01:CDS
AATGTGATCTCATTCGTTGT+TGG 0.473194 1:-71393586 None:intergenic
CGGGGAAGAGTGTTCTAGGT+TGG 0.473708 1:-71391874 None:intergenic
ATTGGTGGTTCTTCCATTGG+TGG 0.475310 1:+71392231 MsG0180003986.01.T01:CDS
CTTGGTCAACTAGGAGTGGC+TGG 0.475698 1:+71396469 MsG0180003986.01.T01:CDS
AATGGAGAGTGCGGCGAAAA+GGG 0.479516 1:-71391790 None:intergenic
GGAGGGGTGAAGAAGGGAGT+AGG 0.479980 1:-71391727 None:intergenic
TTGGAATTTGTTCTGTTGGC+GGG 0.483032 1:+71396551 MsG0180003986.01.T01:CDS
AGAAACATTATTGGAAGTGA+TGG 0.485938 1:-71391819 None:intergenic
CGAATTTCCCATCTCGGAGG+CGG 0.487689 1:+71396777 MsG0180003986.01.T01:CDS
TGGTAGGGAGGGGTGAAGAA+GGG 0.487732 1:-71391733 None:intergenic
GGGAATGAAGATAGAAAGAA+GGG 0.487751 1:-71391647 None:intergenic
TCGGGGCGTTTGTAACCGCC+GGG 0.489363 1:-71391893 None:intergenic
ATTTCCTGGAATAGGGTTCA+AGG 0.489984 1:-71397163 None:intergenic
GAGAAAGATATCTCAAAGAC+GGG 0.490849 1:+71393557 MsG0180003986.01.T01:CDS
ACCAAGATCAAGCGCAGAAT+AGG 0.491215 1:+71396927 MsG0180003986.01.T01:CDS
TCATTCTGTTATTGATGCAA+TGG 0.495631 1:+71397061 MsG0180003986.01.T01:three_prime_UTR
ACAAAATTAATAAATAAGGA+TGG 0.496292 1:+71391398 MsG0180003986.01.T01:five_prime_UTR
GGGTGAAGAAGGGAGTAGGT+GGG 0.496880 1:-71391723 None:intergenic
ATCACACGCCGCCTCCGAGA+TGG 0.500627 1:-71396785 None:intergenic
CTTGGGCCTTAGGGAAGAAA+TGG 0.502374 1:-71391844 None:intergenic
TTAGGGACTCTTGGTCAACT+AGG 0.502895 1:+71396460 MsG0180003986.01.T01:CDS
TTCTGCGCTTGATCTTGGTA+AGG 0.503435 1:-71396923 None:intergenic
CATAAAGAGATTGTTGAAAA+CGG 0.503693 1:+71394400 MsG0180003986.01.T01:CDS
TTTCTTATATATGGTGGTGG+TGG 0.504919 1:+71392313 MsG0180003986.01.T01:CDS
CTTAAACTTGAAACACCTGT+TGG 0.505262 1:+71394620 MsG0180003986.01.T01:CDS
GATTGGATACAGAAAATACT+TGG 0.505510 1:+71395297 MsG0180003986.01.T01:intron
GGGAAGAGTGTTCTAGGTTG+GGG 0.505759 1:-71391872 None:intergenic
CTTGGAATTTGTTCTGTTGG+CGG 0.506769 1:+71396550 MsG0180003986.01.T01:CDS
GGTGTAAGGGATGGTAGGGA+GGG 0.506777 1:-71391744 None:intergenic
AGTCTGTCTGCAATTCCAAC+AGG 0.507009 1:-71394635 None:intergenic
CTATTTCGAATTTCCCATCT+CGG 0.507858 1:+71396771 MsG0180003986.01.T01:CDS
AAAGCAGTTTCCAAATCGGT+TGG 0.509260 1:+71391998 MsG0180003986.01.T01:CDS
TTACTTGCTTCTGGTGCTAG+TGG 0.511768 1:+71392448 MsG0180003986.01.T01:CDS
TTCTTCGTTATTCACAGCAA+TGG 0.512194 1:+71394057 MsG0180003986.01.T01:CDS
GAATCTGATCGGAGTTGAGT+TGG 0.513592 1:-71391940 None:intergenic
ATTTGTTAAACTGGAAGATA+GGG 0.520690 1:+71392648 MsG0180003986.01.T01:CDS
GTTGAGTTGGAGAATTAGAG+TGG 0.522300 1:-71391927 None:intergenic
AGATAGAAAGAAGGGAGAGG+AGG 0.526108 1:-71391639 None:intergenic
TACCATGGATTTGATTTGAA+GGG 0.526464 1:-71391669 None:intergenic
GTACCATGGATTTGATTTGA+AGG 0.530377 1:-71391670 None:intergenic
GTGTGGATAGCGAGAGAAGG+GGG 0.530632 1:-71391765 None:intergenic
AAAATGAGAGCCTTTCTTGG+AGG 0.531067 1:+71394768 MsG0180003986.01.T01:CDS
TGGGTCGACGATCGCAGGGA+TGG 0.531906 1:+71394586 MsG0180003986.01.T01:CDS
AGGTTCCAATAGCGAATTGG+TGG 0.531924 1:+71392216 MsG0180003986.01.T01:CDS
TTGAGTTGGAGAATTAGAGT+GGG 0.532523 1:-71391926 None:intergenic
TCACACGCCGCCTCCGAGAT+GGG 0.532753 1:-71396784 None:intergenic
TATTGCAGCCAAATCCTGCT+TGG 0.535558 1:-71394702 None:intergenic
CAGAGTATAACAGAGGTTGT+GGG 0.536041 1:+71392622 MsG0180003986.01.T01:CDS
TTCTTCAAGTTCATTCGCCA+AGG 0.537920 1:-71396834 None:intergenic
TGGAAGTGATGGGAGAGGAA+TGG 0.537999 1:-71391808 None:intergenic
AGGAGGGAGGGAGATATGGA+TGG 0.538742 1:-71391622 None:intergenic
CAAAATTAATAAATAAGGAT+GGG 0.541144 1:+71391399 MsG0180003986.01.T01:five_prime_UTR
AAATTAGTCAATGAGAGTAA+TGG 0.541323 1:+71392595 MsG0180003986.01.T01:CDS
GAGTGGGGACTTTGAGTTCG+GGG 0.543361 1:-71391910 None:intergenic
GTGTAAGGGATGGTAGGGAG+GGG 0.548181 1:-71391743 None:intergenic
AACAGTAGGAAGACCTTGAT+CGG 0.550869 1:-71392173 None:intergenic
CCAACAAGGGAGAATATACA+AGG 0.551313 1:+71395353 MsG0180003986.01.T01:CDS
GTCTTCCTACTGTTGTTGCT+AGG 0.559275 1:+71392182 MsG0180003986.01.T01:CDS
GTAGGTGGGAGGAATAAGAA+GGG 0.561581 1:-71391709 None:intergenic
TGAAATATCCCAAAGAACTC+AGG 0.564402 1:-71397041 None:intergenic
CTAAAGAAAGGGGATCAAGC+TGG 0.564620 1:+71395447 MsG0180003986.01.T01:CDS
ATCCACTAAATCACGTGTTG+TGG 0.567456 1:+71394909 MsG0180003986.01.T01:CDS
GAAACATTATTGGAAGTGAT+GGG 0.567733 1:-71391818 None:intergenic
AGGCCATGGCAAATTAAAAG+TGG 0.567870 1:-71397091 None:intergenic
GAGGCGGCGTGTGATAGATA+AGG 0.570406 1:+71396793 MsG0180003986.01.T01:CDS
TATGTCATTCTGAATTCTTG+AGG 0.570562 1:-71395019 None:intergenic
TACTTCTCTAAGAATTGGAG+CGG 0.570606 1:-71393686 None:intergenic
TCTTGCTTAAAGAGAGGCCA+TGG 0.574910 1:-71397105 None:intergenic
GGGAGGGAGATATGGATGGA+TGG 0.575219 1:-71391618 None:intergenic
GTGTGATAGATAAGGTGAAA+AGG 0.575343 1:+71396801 MsG0180003986.01.T01:CDS
ACTTCTCTAAGAATTGGAGC+GGG 0.575454 1:-71393685 None:intergenic
TGAGTTGGAGAATTAGAGTG+GGG 0.577769 1:-71391925 None:intergenic
TGAGCAAGAAGTTCGTGAGA+TGG 0.577980 1:+71395518 MsG0180003986.01.T01:CDS
ATCTGTACTGCAAACCACAT+TGG 0.578353 1:+71396513 MsG0180003986.01.T01:CDS
TGAAGATAGAAAGAAGGGAG+AGG 0.581729 1:-71391642 None:intergenic
GAGGAAACAAACTCTATCCA+TGG 0.582861 1:+71394787 MsG0180003986.01.T01:CDS
GGTGTGGATAGCGAGAGAAG+GGG 0.584107 1:-71391766 None:intergenic
ATGACAATTGTTGATACACC+TGG 0.584916 1:+71393815 MsG0180003986.01.T01:CDS
GAAAAGGAAAGCAGATACCT+TGG 0.585138 1:+71396817 MsG0180003986.01.T01:CDS
CTCTAAGAATTGGAGCGGGA+AGG 0.585703 1:-71393681 None:intergenic
GGAGAAAGATATCTCAAAGA+CGG 0.586536 1:+71393556 MsG0180003986.01.T01:CDS
GTTAATAGAAATGGAGAGGT+CGG 0.587179 1:+71392678 MsG0180003986.01.T01:CDS
TGTTATGGAACAGGGTACCA+TGG 0.587563 1:-71391684 None:intergenic
TGGCCTCTCTTTAAGCAAGA+AGG 0.588310 1:+71397108 MsG0180003986.01.T01:three_prime_UTR
AACTTGAAGAAGCCATGAAG+AGG 0.589676 1:+71396846 MsG0180003986.01.T01:CDS
ATCGGAGAGTAAAACGCCAC+TGG 0.590084 1:-71392155 None:intergenic
CAACCTAGAACACTCTTCCC+CGG 0.590957 1:+71391875 MsG0180003986.01.T01:CDS
ACCATGGATTTGATTTGAAG+GGG 0.592880 1:-71391668 None:intergenic
GACTCTTGGTCAACTAGGAG+TGG 0.595185 1:+71396465 MsG0180003986.01.T01:CDS
AGACTATCGATATGCCAAGC+AGG 0.596164 1:+71394688 MsG0180003986.01.T01:CDS
GTTGAGTTTCCCAAAACTAG+AGG 0.598083 1:-71394483 None:intergenic
CATGGCAAATTAAAAGTGGA+TGG 0.598743 1:-71397087 None:intergenic
GATGGATGACTCTCCGTCAG+TGG 0.599652 1:-71391600 None:intergenic
ACTTGAAGAAGCCATGAAGA+GGG 0.600088 1:+71396847 MsG0180003986.01.T01:CDS
AACAGTTAATAGAAATGGAG+AGG 0.600267 1:+71392674 MsG0180003986.01.T01:CDS
ATTATTGGAAGTGATGGGAG+AGG 0.603910 1:-71391813 None:intergenic
AACAACTCAGATTCCACTGA+CGG 0.605575 1:+71391587 MsG0180003986.01.T01:five_prime_UTR
TAGATGGGTCGACGATCGCA+GGG 0.610773 1:+71394582 MsG0180003986.01.T01:CDS
TCGCAGGGATGGATAGAATG+AGG 0.611057 1:+71394597 MsG0180003986.01.T01:CDS
GAGACAGCAGCGTCTTACAG+AGG 0.611085 1:+71393856 MsG0180003986.01.T01:CDS
ACCACTATAACCAATAAGAA+CGG 0.613617 1:-71392915 None:intergenic
GCGCCTTCTTGCTTAAAGAG+AGG 0.614736 1:-71397111 None:intergenic
GTGCGGCGAAAAGGGAGGTG+TGG 0.619577 1:-71391782 None:intergenic
CCATGGATTTGATTTGAAGG+GGG 0.619733 1:-71391667 None:intergenic
GTCATTCTGAATTCTTGAGG+TGG 0.619878 1:-71395016 None:intergenic
ATATGAGTTGCTAAAGAAAG+GGG 0.621951 1:+71395437 MsG0180003986.01.T01:CDS
AGAGCAGATCGAGCAGACAC+AGG 0.622073 1:-71394440 None:intergenic
TGTACAAATCTAGCCACCAA+TGG 0.622816 1:-71392244 None:intergenic
GCCACGTGTAAGAATCTGAT+CGG 0.628623 1:-71391951 None:intergenic
GCTGCCGCTGCTGTTACCAG+TGG 0.632649 1:+71392139 MsG0180003986.01.T01:CDS
ACAGCAATGGAAGAAGAAAG+TGG 0.636739 1:+71394070 MsG0180003986.01.T01:CDS
CGCTGTGAAAGGTATCCAGA+TGG 0.637277 1:+71393643 MsG0180003986.01.T01:CDS
TTTATCAATCAAGTCTAGTG+CGG 0.640620 1:-71391978 None:intergenic
TAGGTGGGAGGAATAAGAAG+GGG 0.643219 1:-71391708 None:intergenic
GGAGAGTGCGGCGAAAAGGG+AGG 0.644910 1:-71391787 None:intergenic
ACCTGAACAGATGACACAGA+AGG 0.647984 1:-71395048 None:intergenic
GTAAATGCATCGAAATCTGA+AGG 0.648586 1:+71392283 MsG0180003986.01.T01:CDS
GTATTCCTAGCAACAACAGT+AGG 0.653665 1:-71392187 None:intergenic
GAGAAACTTGTCATACGATG+AGG 0.666435 1:+71392417 MsG0180003986.01.T01:CDS
AGTATAACAGAGGTTGTGGG+TGG 0.666437 1:+71392625 MsG0180003986.01.T01:CDS
GTGTAACTTGATATATGCAA+TGG 0.666867 1:+71397215 MsG0180003986.01.T01:three_prime_UTR
CAAGTTTCTCCCCACAAACG+AGG 0.670479 1:-71392404 None:intergenic
TTTCGAATTTCCCATCTCGG+AGG 0.670630 1:+71396774 MsG0180003986.01.T01:CDS
AACGCCACTGGTAACAGCAG+CGG 0.672510 1:-71392143 None:intergenic
CTAACTAGTAATGAACAAAG+TGG 0.676424 1:+71392031 MsG0180003986.01.T01:CDS
TGCAAATGATGAGAGAACAC+TGG 0.676506 1:+71392543 MsG0180003986.01.T01:CDS
TGGGAGAGGAATGGAGAGTG+CGG 0.678631 1:-71391799 None:intergenic
TGGTTTGCAGAGTATAACAG+AGG 0.684199 1:+71392615 MsG0180003986.01.T01:CDS
TCGCCCTTTAACTGGAAGTG+AGG 0.689500 1:+71393925 MsG0180003986.01.T01:CDS
GAAGGGGTTGTTATGGAACA+GGG 0.689780 1:-71391692 None:intergenic
ACTAGTAATGAACAAAGTGG+TGG 0.690621 1:+71392034 MsG0180003986.01.T01:CDS
AGCAAGAAGATCTTCCAATG+TGG 0.693565 1:-71396527 None:intergenic
CATTTATCAGAATAATCATG+AGG 0.697867 1:+71394115 MsG0180003986.01.T01:CDS
TCCGATCAGATTCTTACACG+TGG 0.704174 1:+71391950 MsG0180003986.01.T01:CDS
CGGGGCGTTTGTAACCGCCG+GGG 0.705283 1:-71391892 None:intergenic
TTTGCCAATGACTCTCACAA+AGG 0.714611 1:-71396900 None:intergenic
AAAAGAAGTAAGTCTGCACG+AGG 0.721303 1:-71393887 None:intergenic
AGAAAGATATCTCAAAGACG+GGG 0.744416 1:+71393558 MsG0180003986.01.T01:CDS
GAGAGAACACTGGATGATCG+TGG 0.745507 1:+71392553 MsG0180003986.01.T01:CDS
CCTAGAACACTCTTCCCCGG+CGG 0.765548 1:+71391878 MsG0180003986.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATATTTTTTTAAAAAAAT+TGG + Chr1:71389474-71389493 MsG0180003986.01.T01:intron 0.0%
!! ACGTAATAAATTATTATTAA+GGG + Chr1:71389878-71389897 MsG0180003986.01.T01:intron 10.0%
!! TACGTAATAAATTATTATTA+AGG + Chr1:71389877-71389896 MsG0180003986.01.T01:intron 10.0%
!! TATATTATCTAATAGTATTT+AGG + Chr1:71389436-71389455 MsG0180003986.01.T01:intron 10.0%
!!! AAATAAAAAAAAGTGTTAAA+AGG + Chr1:71389647-71389666 MsG0180003986.01.T01:intron 10.0%
!!! AATATTTTCTTCAAAAAAAA+AGG + Chr1:71391251-71391270 MsG0180003986.01.T01:intron 10.0%
!!! AGATTTTAAATAAAAACATA+AGG + Chr1:71389908-71389927 MsG0180003986.01.T01:intron 10.0%
!!! CTTTTTTTTATTTTATCTTA+TGG - Chr1:71389640-71389659 None:intergenic 10.0%
!! ACAAAATTAATAAATAAGGA+TGG + Chr1:71391398-71391417 MsG0180003986.01.T01:five_prime_UTR 15.0%
!! AGAAAAAAAAAAAACACTAA+TGG + Chr1:71391435-71391454 MsG0180003986.01.T01:five_prime_UTR 15.0%
!! AGTTATAATAAATAGTAATG+TGG - Chr1:71393387-71393406 None:intergenic 15.0%
!! ATAAAAACATAAGGTAAAAT+TGG + Chr1:71389917-71389936 MsG0180003986.01.T01:intron 15.0%
!! ATAGTAAACATTATTTCAAA+AGG + Chr1:71397297-71397316 MsG0180003986.01.T01:three_prime_UTR 15.0%
!! ATAGTAATGAAATAATATCT+AGG + Chr1:71396676-71396695 MsG0180003986.01.T01:intron 15.0%
!! CAAAATTAATAAATAAGGAT+GGG + Chr1:71391399-71391418 MsG0180003986.01.T01:five_prime_UTR 15.0%
!! CGTAACAAAATTAATAAATA+AGG + Chr1:71391394-71391413 MsG0180003986.01.T01:five_prime_UTR 15.0%
!! TAAGTATAAAATGACATAAA+AGG + Chr1:71389389-71389408 MsG0180003986.01.T01:intron 15.0%
!!! AGTTTTTACATTATTTTACA+AGG - Chr1:71395557-71395576 None:intergenic 15.0%
!!! TTTTTATGCTATTTTACTTA+CGG - Chr1:71395916-71395935 None:intergenic 15.0%
!! AAATTGTTCTTGTGTATATA+TGG - Chr1:71389719-71389738 None:intergenic 20.0%
!! AATATTCTAATTCATCATCT+AGG - Chr1:71390851-71390870 None:intergenic 20.0%
!! AATATTTGTTTAGTGTACAA+TGG - Chr1:71394251-71394270 None:intergenic 20.0%
!! ACATTTAAGCAAAACATAAA+TGG - Chr1:71395269-71395288 None:intergenic 20.0%
!! ACGAGTTAAAGATTATTTAT+TGG - Chr1:71391210-71391229 None:intergenic 20.0%
!! AGACAATATTCATTCATATA+TGG - Chr1:71396318-71396337 None:intergenic 20.0%
!! ATTGTACACTAAACAAATAT+TGG + Chr1:71394250-71394269 MsG0180003986.01.T01:intron 20.0%
!! ATTTCATTACTATCTCTTAA+AGG - Chr1:71396669-71396688 None:intergenic 20.0%
!! GACAATATTCATTCATATAT+GGG - Chr1:71396317-71396336 None:intergenic 20.0%
!! GTTAAAACTAGTTAACAAAT+AGG + Chr1:71393032-71393051 MsG0180003986.01.T01:intron 20.0%
!! TAATAATGAATCTTGTTAAC+CGG - Chr1:71391128-71391147 None:intergenic 20.0%
!! TAGATGATGAATTAGAATAT+TGG + Chr1:71390850-71390869 MsG0180003986.01.T01:intron 20.0%
!! TAGTTATATGTAATGCATAT+TGG - Chr1:71390142-71390161 None:intergenic 20.0%
!! TATGTTTCATGATTCATATT+GGG + Chr1:71394143-71394162 MsG0180003986.01.T01:intron 20.0%
!! TTAAGAACATACTAATTAAG+AGG - Chr1:71394861-71394880 None:intergenic 20.0%
!! TTATATGATTAATGATTTCC+TGG - Chr1:71397180-71397199 None:intergenic 20.0%
!! TTATGTTTCATGATTCATAT+TGG + Chr1:71394142-71394161 MsG0180003986.01.T01:intron 20.0%
!! TTCCTATATTGTTATACTTA+TGG + Chr1:71393270-71393289 MsG0180003986.01.T01:intron 20.0%
!! TTGTACACTAAACAAATATT+GGG + Chr1:71394251-71394270 MsG0180003986.01.T01:intron 20.0%
!!! AAATGATTTTGCATTGAATA+TGG + Chr1:71394745-71394764 MsG0180003986.01.T01:CDS 20.0%
!!! AATATTTTCTACCATATCAA+CGG - Chr1:71391237-71391256 None:intergenic 20.0%
!!! ATACACAAGAACAATTTTTT+TGG + Chr1:71389722-71389741 MsG0180003986.01.T01:intron 20.0%
!!! ATGTTTTGCTTAAATGTTTT+TGG + Chr1:71395272-71395291 MsG0180003986.01.T01:intron 20.0%
!!! CAAAAGGTTAATTAAGTTTT+TGG + Chr1:71397313-71397332 MsG0180003986.01.T01:three_prime_UTR 20.0%
!!! CATGTTTTATTTTCTTTTTC+AGG + Chr1:71394028-71394047 MsG0180003986.01.T01:intron 20.0%
!!! GTTTTTGGTCATATAAATAT+TGG + Chr1:71397328-71397347 MsG0180003986.01.T01:three_prime_UTR 20.0%
!!! TGTTATCTAAACTAATCTTT+TGG - Chr1:71391571-71391590 None:intergenic 20.0%
!!! TTAGTCCTTTTTTTTAGTAT+GGG + Chr1:71393953-71393972 MsG0180003986.01.T01:intron 20.0%
!!! TTATAAAAACTTGCTTGTTT+TGG - Chr1:71391008-71391027 None:intergenic 20.0%
!!! TTCTTTTTGATAATGTCAAA+GGG - Chr1:71389076-71389095 None:intergenic 20.0%
!!! TTTTATATAGCTTTCTAGAT+GGG + Chr1:71394567-71394586 MsG0180003986.01.T01:CDS 20.0%
!!! TTTTATGCTATTTTACTTAC+GGG - Chr1:71395915-71395934 None:intergenic 20.0%
!!! TTTTTATATAGCTTTCTAGA+TGG + Chr1:71394566-71394585 MsG0180003986.01.T01:CDS 20.0%
!!! TTTTTTAGATGGAATTTGTT+AGG + Chr1:71391308-71391327 MsG0180003986.01.T01:intron 20.0%
! AAACAGAGTCGTATTATATT+TGG - Chr1:71389219-71389238 None:intergenic 25.0%
! AAATAAAATGGCATTATGAC+AGG - Chr1:71390586-71390605 None:intergenic 25.0%
! AAATATAATACGACTCTGTT+TGG + Chr1:71389218-71389237 MsG0180003986.01.T01:intron 25.0%
! AAATATTATATTTACCGCTG+AGG - Chr1:71396348-71396367 None:intergenic 25.0%
! AAATTAGTCAATGAGAGTAA+TGG + Chr1:71392595-71392614 MsG0180003986.01.T01:CDS 25.0%
! AAGTAAAGACAACAACATTA+GGG - Chr1:71394282-71394301 None:intergenic 25.0%
! AATAAAATGGCATTATGACA+GGG - Chr1:71390585-71390604 None:intergenic 25.0%
! ACAAGCTGCATATATATTTA+AGG + Chr1:71389683-71389702 MsG0180003986.01.T01:intron 25.0%
! ACACAAAGTAAACAATATAC+TGG - Chr1:71392820-71392839 None:intergenic 25.0%
! AGTATGTTCTTAAATTGCAA+TGG + Chr1:71394868-71394887 MsG0180003986.01.T01:intron 25.0%
! ATGATGAATGATCAATCAAT+AGG + Chr1:71396051-71396070 MsG0180003986.01.T01:intron 25.0%
! ATGTATAACGTAAAACTACT+TGG - Chr1:71394332-71394351 None:intergenic 25.0%
! ATTAATGATTTCCTGGAATA+GGG - Chr1:71397173-71397192 None:intergenic 25.0%
! ATTTATTTGACTCTATTGTC+AGG + Chr1:71393489-71393508 MsG0180003986.01.T01:intron 25.0%
! CAAACAGAAATTGTAATCAA+GGG - Chr1:71393752-71393771 None:intergenic 25.0%
! CAAGCTGCATATATATTTAA+GGG + Chr1:71389684-71389703 MsG0180003986.01.T01:intron 25.0%
! CATAAAGAGATTGTTGAAAA+CGG + Chr1:71394400-71394419 MsG0180003986.01.T01:CDS 25.0%
! CATACCATTTCATAAATTAC+AGG + Chr1:71390219-71390238 MsG0180003986.01.T01:intron 25.0%
! CATTGAACTTCAATAAAACT+TGG + Chr1:71389037-71389056 MsG0180003986.01.T01:intron 25.0%
! CATTTATCAGAATAATCATG+AGG + Chr1:71394115-71394134 MsG0180003986.01.T01:CDS 25.0%
! GGCATTGTGAAAATTAAAAT+AGG + Chr1:71390261-71390280 MsG0180003986.01.T01:intron 25.0%
! GTCCATAAGTATAACAATAT+AGG - Chr1:71393275-71393294 None:intergenic 25.0%
! TATATGTGTAACAAACTTTC+CGG + Chr1:71395853-71395872 MsG0180003986.01.T01:intron 25.0%
! TCATATCAATAAACTTTGAG+AGG - Chr1:71390725-71390744 None:intergenic 25.0%
! TGATTTATTTGACCATAAAC+TGG + Chr1:71395150-71395169 MsG0180003986.01.T01:intron 25.0%
! TGGCAAATAGTCTTTATATT+GGG - Chr1:71390619-71390638 None:intergenic 25.0%
! TGTACCTGTAATTTATGAAA+TGG - Chr1:71390226-71390245 None:intergenic 25.0%
! TTGCTTCGTAAATTATTTGA+TGG + Chr1:71392514-71392533 MsG0180003986.01.T01:CDS 25.0%
! TTGTTTACTTTGTGTTGAAT+TGG + Chr1:71392825-71392844 MsG0180003986.01.T01:intron 25.0%
! TTTAATCTCGCATTAGTATT+TGG - Chr1:71395218-71395237 None:intergenic 25.0%
! TTTATTTGACTCTATTGTCA+GGG + Chr1:71393490-71393509 MsG0180003986.01.T01:intron 25.0%
! TTTGAACAATGCAATATGTT+GGG + Chr1:71393228-71393247 MsG0180003986.01.T01:intron 25.0%
!! AAACTTCCATTTAAAATGTC+CGG - Chr1:71395875-71395894 None:intergenic 25.0%
!! AAAGTGTTTGGTTAAATTAG+CGG + Chr1:71389353-71389372 MsG0180003986.01.T01:intron 25.0%
!! ACTATTTTCATGAATCAATG+AGG - Chr1:71395400-71395419 None:intergenic 25.0%
!! ATAGGTTTGTTTAAAAGTTG+AGG + Chr1:71396069-71396088 MsG0180003986.01.T01:intron 25.0%
!! ATTTGTTAAACTGGAAGATA+GGG + Chr1:71392648-71392667 MsG0180003986.01.T01:CDS 25.0%
!! CTAATAGTATTTAGGATATC+TGG + Chr1:71389444-71389463 MsG0180003986.01.T01:intron 25.0%
!! GAACTTTTAAATCAGGAAAT+TGG + Chr1:71392346-71392365 MsG0180003986.01.T01:CDS 25.0%
!! GATAAGCTAATTAAAGTGTT+TGG + Chr1:71389341-71389360 MsG0180003986.01.T01:intron 25.0%
!! GTTCATAATTTTTGAATGTC+AGG + Chr1:71394823-71394842 MsG0180003986.01.T01:intron 25.0%
!! GTTGTATCATATGTTTTCAA+AGG + Chr1:71394973-71394992 MsG0180003986.01.T01:CDS 25.0%
!! TATTTGGTATTTGTGTTTTG+TGG - Chr1:71389203-71389222 None:intergenic 25.0%
!! TTAGCATTTAGAATGATTTC+TGG + Chr1:71395990-71396009 MsG0180003986.01.T01:intron 25.0%
!! TTCGTAAATTATTTGATGGT+GGG + Chr1:71392518-71392537 MsG0180003986.01.T01:CDS 25.0%
!! TTCTCATGATTTGAAATCAA+AGG + Chr1:71395660-71395679 MsG0180003986.01.T01:intron 25.0%
!!! CTTAAATGTTTTTGGTTGAT+TGG + Chr1:71395280-71395299 MsG0180003986.01.T01:intron 25.0%
!!! CTTCTTTTTGATAATGTCAA+AGG - Chr1:71389077-71389096 None:intergenic 25.0%
!!! GATCTTTTAACTAAAACAGT+TGG + Chr1:71392747-71392766 MsG0180003986.01.T01:intron 25.0%
!!! GTCATAATGCCATTTTATTT+TGG + Chr1:71390586-71390605 MsG0180003986.01.T01:intron 25.0%
!!! GTTAGTCCTTTTTTTTAGTA+TGG + Chr1:71393952-71393971 MsG0180003986.01.T01:intron 25.0%
!!! GTTTTATACAAGTTTGGTTT+CGG - Chr1:71395826-71395845 None:intergenic 25.0%
!!! TAATGGTCAACTTTTTTTTG+AGG + Chr1:71391452-71391471 MsG0180003986.01.T01:five_prime_UTR 25.0%
!!! TAGTCCTTTTTTTTAGTATG+GGG + Chr1:71393954-71393973 MsG0180003986.01.T01:intron 25.0%
!!! TCTTTTTGATAATGTCAAAG+GGG - Chr1:71389075-71389094 None:intergenic 25.0%
!!! TGAGTTTCTAGTGAATATTA+TGG - Chr1:71390753-71390772 None:intergenic 25.0%
!!! TTACTAGTTTGGAAAGTTTT+GGG + Chr1:71392476-71392495 MsG0180003986.01.T01:CDS 25.0%
!!! TTAGTTTTCTCCTTATGTTT+TGG + Chr1:71393722-71393741 MsG0180003986.01.T01:intron 25.0%
!!! TTGTTCTTTTGTACTGATAT+AGG + Chr1:71394300-71394319 MsG0180003986.01.T01:intron 25.0%
AAAAATAGCTTATAAGCTCG+TGG + Chr1:71389997-71390016 MsG0180003986.01.T01:intron 30.0%
AAATAAAACATGTCATACCC+TGG - Chr1:71394020-71394039 None:intergenic 30.0%
AAATTCTTGCAAGATCAACT+TGG - Chr1:71388992-71389011 None:intergenic 30.0%
AACAGTTAATAGAAATGGAG+AGG + Chr1:71392674-71392693 MsG0180003986.01.T01:CDS 30.0%
AACCAAACTTGTATAAAACC+AGG + Chr1:71395827-71395846 MsG0180003986.01.T01:intron 30.0%
AACCTAATAAAGCAAATGAG+CGG + Chr1:71391344-71391363 MsG0180003986.01.T01:intron 30.0%
AATAAAACATGTCATACCCT+GGG - Chr1:71394019-71394038 None:intergenic 30.0%
ACATATGAGTTGCTAAAGAA+AGG + Chr1:71395435-71395454 MsG0180003986.01.T01:CDS 30.0%
ACCAAACTTGTATAAAACCA+GGG + Chr1:71395828-71395847 MsG0180003986.01.T01:intron 30.0%
ACCACTATAACCAATAAGAA+CGG - Chr1:71392918-71392937 None:intergenic 30.0%
ACTTAATTGTTGATCAGACA+AGG - Chr1:71396246-71396265 None:intergenic 30.0%
ACTTTGTGTTGAATTGGAAT+TGG + Chr1:71392831-71392850 MsG0180003986.01.T01:intron 30.0%
AGAAACATTATTGGAAGTGA+TGG - Chr1:71391822-71391841 None:intergenic 30.0%
AGAATTGTTTAGTGACATAG+TGG - Chr1:71396410-71396429 None:intergenic 30.0%
AGGTCATTCAAACTCTTATA+TGG - Chr1:71390651-71390670 None:intergenic 30.0%
ATAAAATGGCATTATGACAG+GGG - Chr1:71390584-71390603 None:intergenic 30.0%
ATAACCAGTGTGATTTATTC+AGG + Chr1:71396099-71396118 MsG0180003986.01.T01:intron 30.0%
ATATGAGTTGCTAAAGAAAG+GGG + Chr1:71395437-71395456 MsG0180003986.01.T01:CDS 30.0%
ATCATCTAGGAAAATTCAGA+AGG - Chr1:71390838-71390857 None:intergenic 30.0%
ATTTGTTTAGTGTACAATGG+AGG - Chr1:71394248-71394267 None:intergenic 30.0%
CAAGTAAAGACAACAACATT+AGG - Chr1:71394283-71394302 None:intergenic 30.0%
CAATTTCTGTTTGCAATTAG+TGG + Chr1:71393759-71393778 MsG0180003986.01.T01:intron 30.0%
CATATGAGTTGCTAAAGAAA+GGG + Chr1:71395436-71395455 MsG0180003986.01.T01:CDS 30.0%
CATTCTAAATGCTAACCTTA+AGG - Chr1:71395985-71396004 None:intergenic 30.0%
CTAACTAGTAATGAACAAAG+TGG + Chr1:71392031-71392050 MsG0180003986.01.T01:CDS 30.0%
CTCTAGTAAATGCTTATACA+TGG - Chr1:71393124-71393143 None:intergenic 30.0%
CTTCGTAAATTATTTGATGG+TGG + Chr1:71392517-71392536 MsG0180003986.01.T01:CDS 30.0%
CTTTATGTTGTCCTTAATGA+AGG - Chr1:71394387-71394406 None:intergenic 30.0%
CTTTGAACAATGCAATATGT+TGG + Chr1:71393227-71393246 MsG0180003986.01.T01:intron 30.0%
GAAACATTATTGGAAGTGAT+GGG - Chr1:71391821-71391840 None:intergenic 30.0%
GAAATGGTATGTACTCTTTA+TGG - Chr1:71390210-71390229 None:intergenic 30.0%
GATTAATGATTTCCTGGAAT+AGG - Chr1:71397174-71397193 None:intergenic 30.0%
GATTGATCATTCATCATTTG+AGG - Chr1:71396048-71396067 None:intergenic 30.0%
GATTGGATACAGAAAATACT+TGG + Chr1:71395297-71395316 MsG0180003986.01.T01:intron 30.0%
GATTTGACAAAAAATGAGCT+TGG - Chr1:71389125-71389144 None:intergenic 30.0%
GCAAACAGAAATTGTAATCA+AGG - Chr1:71393753-71393772 None:intergenic 30.0%
GGAGAAACAGTTAATAGAAA+TGG + Chr1:71392669-71392688 MsG0180003986.01.T01:CDS 30.0%
GTGGCAAATAGTCTTTATAT+TGG - Chr1:71390620-71390639 None:intergenic 30.0%
GTGTAACTTGATATATGCAA+TGG + Chr1:71397215-71397234 MsG0180003986.01.T01:three_prime_UTR 30.0%
TAAAGACTATTTGCCACAAT+TGG + Chr1:71390623-71390642 MsG0180003986.01.T01:intron 30.0%
TACTTGGAGATTACGAAAAT+TGG + Chr1:71395313-71395332 MsG0180003986.01.T01:CDS 30.0%
TAGCAAATATATTGACCATC+TGG - Chr1:71393661-71393680 None:intergenic 30.0%
TATGCCCCATACTAAAAAAA+AGG - Chr1:71393961-71393980 None:intergenic 30.0%
TATGTCATTCTGAATTCTTG+AGG - Chr1:71395022-71395041 None:intergenic 30.0%
TCAGTTGAACAACTAACTAA+TGG + Chr1:71395735-71395754 MsG0180003986.01.T01:intron 30.0%
TCATTCTGTTATTGATGCAA+TGG + Chr1:71397061-71397080 MsG0180003986.01.T01:three_prime_UTR 30.0%
TCTTCAAAAAAAAAGGCAAG+CGG + Chr1:71391258-71391277 MsG0180003986.01.T01:intron 30.0%
TGAACAACTAACTAATGGAA+TGG + Chr1:71395740-71395759 MsG0180003986.01.T01:intron 30.0%
TGAACTTCAATAAAACTTGG+TGG + Chr1:71389040-71389059 MsG0180003986.01.T01:intron 30.0%
TGAAGAATTACATTAGTTCC+AGG - Chr1:71393836-71393855 None:intergenic 30.0%
TGATAAAGCAGTTTCCAAAT+CGG + Chr1:71391994-71392013 MsG0180003986.01.T01:CDS 30.0%
TGCCAGAAAACGTTAATATA+GGG - Chr1:71396188-71396207 None:intergenic 30.0%
TTATTTGACTCTATTGTCAG+GGG + Chr1:71393491-71393510 MsG0180003986.01.T01:intron 30.0%
TTCACTTCTTGCTAATATCT+GGG + Chr1:71396720-71396739 MsG0180003986.01.T01:intron 30.0%
TTCATTTGCATACACATGAT+AGG + Chr1:71390794-71390813 MsG0180003986.01.T01:intron 30.0%
TTGTTATATAGTAGCTTCCA+GGG - Chr1:71396212-71396231 None:intergenic 30.0%
TTTAACAAGTTCATGTCGAT+AGG - Chr1:71390982-71391001 None:intergenic 30.0%
TTTAGTTAAAAGATCACCAG+AGG - Chr1:71392742-71392761 None:intergenic 30.0%
TTTATCAATCAAGTCTAGTG+CGG - Chr1:71391981-71392000 None:intergenic 30.0%
! AAAGTGCTAATCGATATGAT+AGG + Chr1:71390289-71390308 MsG0180003986.01.T01:intron 30.0%
! AACAAAGAGGTTTTCTATGA+TGG - Chr1:71390533-71390552 None:intergenic 30.0%
! AACTTTCCGGACATTTTAAA+TGG + Chr1:71395866-71395885 MsG0180003986.01.T01:intron 30.0%
! AATTGGTTTCAAATGACAGA+TGG + Chr1:71392848-71392867 MsG0180003986.01.T01:intron 30.0%
! AATTGTCATCTGTTTTCAGA+AGG - Chr1:71393804-71393823 None:intergenic 30.0%
! ATGCATTTTCAAATACAACC+TGG - Chr1:71396613-71396632 None:intergenic 30.0%
! ATGTCTAAGATATTGCCTTA+AGG + Chr1:71395967-71395986 MsG0180003986.01.T01:intron 30.0%
! CGATATGGAACTTTTAAATC+AGG + Chr1:71392339-71392358 MsG0180003986.01.T01:CDS 30.0%
! GATTTTCTTATATATGGTGG+TGG + Chr1:71392310-71392329 MsG0180003986.01.T01:CDS 30.0%
! TCACATTCTTTCACATTTTC+AGG + Chr1:71390428-71390447 MsG0180003986.01.T01:intron 30.0%
! TGACTTACTTCTCTAAGAAT+TGG - Chr1:71393694-71393713 None:intergenic 30.0%
! TGCATTTTCAAATACAACCT+GGG - Chr1:71396612-71396631 None:intergenic 30.0%
! TTCCCTATATTAACGTTTTC+TGG + Chr1:71396183-71396202 MsG0180003986.01.T01:intron 30.0%
! TTCCTTCTGTGTAGATTTTA+GGG + Chr1:71396443-71396462 MsG0180003986.01.T01:intron 30.0%
! TTGTGTTTTGTGGTTATCAT+TGG - Chr1:71389193-71389212 None:intergenic 30.0%
!! AAGTTGACCGTCATTTTAAT+TGG + Chr1:71391517-71391536 MsG0180003986.01.T01:intron 30.0%
!! GATTTGTTAAACTGGAAGAT+AGG + Chr1:71392647-71392666 MsG0180003986.01.T01:CDS 30.0%
!! GCTGATTTTCTTATATATGG+TGG + Chr1:71392307-71392326 MsG0180003986.01.T01:CDS 30.0%
!! GTTACTAGTTTGGAAAGTTT+TGG + Chr1:71392475-71392494 MsG0180003986.01.T01:CDS 30.0%
!! TACCATGGATTTGATTTGAA+GGG - Chr1:71391672-71391691 None:intergenic 30.0%
!! TGAAGTTGATGAAGAATTAG+AGG - Chr1:71390411-71390430 None:intergenic 30.0%
!! TTTACTAGAGTGTTGATTCA+TGG + Chr1:71393134-71393153 MsG0180003986.01.T01:intron 30.0%
!!! AGCGTTGTTTTTCAATATCT+AGG - Chr1:71393627-71393646 None:intergenic 30.0%
!!! AGTTGACCGTCATTTTAATT+GGG + Chr1:71391518-71391537 MsG0180003986.01.T01:intron 30.0%
!!! CTTTTTGATAATGTCAAAGG+GGG - Chr1:71389074-71389093 None:intergenic 30.0%
!!! GGTGCTGATTTTCTTATATA+TGG + Chr1:71392304-71392323 MsG0180003986.01.T01:CDS 30.0%
!!! TAGTGGTTTTGTTACTAGTT+TGG + Chr1:71392465-71392484 MsG0180003986.01.T01:CDS 30.0%
!!! TGTGCAATGCATTTTTTAGA+TGG + Chr1:71391297-71391316 MsG0180003986.01.T01:intron 30.0%
AAAAAAAAAGGCAAGCGGAT+AGG + Chr1:71391263-71391282 MsG0180003986.01.T01:intron 35.0%
AAAAAAGCCTCGTTTGGTAA+TGG - Chr1:71390030-71390049 None:intergenic 35.0%
AAATAAGGATGGGTGAGAAT+AGG + Chr1:71391409-71391428 MsG0180003986.01.T01:five_prime_UTR 35.0%
AACTTTCCAACTTTCACCTT+AGG + Chr1:71393335-71393354 MsG0180003986.01.T01:intron 35.0%
AAGTTCATGTCGATAGGTAT+AGG - Chr1:71390976-71390995 None:intergenic 35.0%
AATATGGGTCTATGATAGGA+AGG - Chr1:71390697-71390716 None:intergenic 35.0%
AATCACAATTCCAACCGATT+TGG - Chr1:71392011-71392030 None:intergenic 35.0%
AATCGATATGATAGGATGCA+TGG + Chr1:71390297-71390316 MsG0180003986.01.T01:intron 35.0%
AATGTGATCTCATTCGTTGT+TGG - Chr1:71393589-71393608 None:intergenic 35.0%
ACGAACTAAAAGAGAACTTG+AGG - Chr1:71395593-71395612 None:intergenic 35.0%
ACTAAATGTGCAGTACAATC+TGG - Chr1:71395100-71395119 None:intergenic 35.0%
ACTAGTAATGAACAAAGTGG+TGG + Chr1:71392034-71392053 MsG0180003986.01.T01:CDS 35.0%
ACTCTGTTTGGTAAAAACAG+CGG + Chr1:71389230-71389249 MsG0180003986.01.T01:intron 35.0%
AGAAAGATATCTCAAAGACG+GGG + Chr1:71393558-71393577 MsG0180003986.01.T01:CDS 35.0%
AGAACAATACAACTGACATG+TGG + Chr1:71390913-71390932 MsG0180003986.01.T01:intron 35.0%
AGGCAAAACTGAAATGTACT+TGG + Chr1:71389812-71389831 MsG0180003986.01.T01:intron 35.0%
ATACCTCACTTCCAGTTAAA+GGG - Chr1:71393931-71393950 None:intergenic 35.0%
ATGACAATTGTTGATACACC+TGG + Chr1:71393815-71393834 MsG0180003986.01.T01:CDS 35.0%
ATTGTTTAGTGACATAGTGG+TGG - Chr1:71396407-71396426 None:intergenic 35.0%
CAAGAAGAAGAAGATGAAGA+CGG - Chr1:71390482-71390501 None:intergenic 35.0%
CATGGCAAATTAAAAGTGGA+TGG - Chr1:71397090-71397109 None:intergenic 35.0%
CTAATACCAATGTATATCCC+AGG - Chr1:71392973-71392992 None:intergenic 35.0%
CTATTTCGAATTTCCCATCT+CGG + Chr1:71396771-71396790 MsG0180003986.01.T01:CDS 35.0%
CTCAAATATGGGTCTATGAT+AGG - Chr1:71390701-71390720 None:intergenic 35.0%
CTCTTATATGGTTCCAATTG+TGG - Chr1:71390639-71390658 None:intergenic 35.0%
CTTAAACTTGAAACACCTGT+TGG + Chr1:71394620-71394639 MsG0180003986.01.T01:CDS 35.0%
CTTGATTCCTTTCGTATTAG+AGG - Chr1:71390671-71390690 None:intergenic 35.0%
CTTGTATATTCTCCCTTGTT+GGG - Chr1:71395355-71395374 None:intergenic 35.0%
GAAATGGCGAGAAACATTAT+TGG - Chr1:71391831-71391850 None:intergenic 35.0%
GAACTTCTTGTAACATACCA+TGG - Chr1:71394807-71394826 None:intergenic 35.0%
GACTGAAGCAGTAGAAAATT+TGG + Chr1:71396874-71396893 MsG0180003986.01.T01:CDS 35.0%
GAGAAAGATATCTCAAAGAC+GGG + Chr1:71393557-71393576 MsG0180003986.01.T01:CDS 35.0%
GGAGAAAGATATCTCAAAGA+CGG + Chr1:71393556-71393575 MsG0180003986.01.T01:CDS 35.0%
GGAGTCTCTCCAAAATAAAA+TGG - Chr1:71390598-71390617 None:intergenic 35.0%
GGGAATGAAGATAGAAAGAA+GGG - Chr1:71391650-71391669 None:intergenic 35.0%
GGTACAGCATAAGAAATACA+AGG + Chr1:71390240-71390259 MsG0180003986.01.T01:intron 35.0%
GTAAATGCATCGAAATCTGA+AGG + Chr1:71392283-71392302 MsG0180003986.01.T01:CDS 35.0%
GTATACTTACAGTGAGTAGT+TGG + Chr1:71393156-71393175 MsG0180003986.01.T01:intron 35.0%
GTATCTTCAAACCGTCTTAA+AGG - Chr1:71390954-71390973 None:intergenic 35.0%
GTCAAGAAGTGATACTACTA+CGG - Chr1:71390560-71390579 None:intergenic 35.0%
GTGCCAGAAAACGTTAATAT+AGG - Chr1:71396189-71396208 None:intergenic 35.0%
GTGTGATAGATAAGGTGAAA+AGG + Chr1:71396801-71396820 MsG0180003986.01.T01:CDS 35.0%
GTTAATAGAAATGGAGAGGT+CGG + Chr1:71392678-71392697 MsG0180003986.01.T01:CDS 35.0%
GTTCACTTCTTGCTAATATC+TGG + Chr1:71396719-71396738 MsG0180003986.01.T01:intron 35.0%
GTTGCTAGGAATACAATGTT+AGG + Chr1:71392196-71392215 MsG0180003986.01.T01:CDS 35.0%
TAGATCAATCCTAGAAGCTT+CGG - Chr1:71394174-71394193 None:intergenic 35.0%
TAGCTGACAATACTCATCAT+AGG + Chr1:71393312-71393331 MsG0180003986.01.T01:intron 35.0%
TATTTGACTCTATTGTCAGG+GGG + Chr1:71393492-71393511 MsG0180003986.01.T01:intron 35.0%
TCAAGCTCGTAAAAGCTATT+GGG - Chr1:71394542-71394561 None:intergenic 35.0%
TCAGATAACTACTCAACCTA+AGG - Chr1:71393354-71393373 None:intergenic 35.0%
TGAAATATCCCAAAGAACTC+AGG - Chr1:71397044-71397063 None:intergenic 35.0%
TGAATGACCTCTAATACGAA+AGG + Chr1:71390661-71390680 MsG0180003986.01.T01:intron 35.0%
TGCTCTTGAAGCAAAACTTA+TGG + Chr1:71394457-71394476 MsG0180003986.01.T01:CDS 35.0%
TGCTGAATCTCAACAAATTC+TGG + Chr1:71392945-71392964 MsG0180003986.01.T01:intron 35.0%
TGTTATATAGTAGCTTCCAG+GGG - Chr1:71396211-71396230 None:intergenic 35.0%
TTCAGAAGGATTGATGAATC+AGG - Chr1:71390824-71390843 None:intergenic 35.0%
TTCTTCGTTATTCACAGCAA+TGG + Chr1:71394057-71394076 MsG0180003986.01.T01:CDS 35.0%
TTGAAAAACAACGCTGTGAA+AGG + Chr1:71393632-71393651 MsG0180003986.01.T01:CDS 35.0%
TTTCTGTCTCACAAAGCAAT+TGG + Chr1:71393407-71393426 MsG0180003986.01.T01:intron 35.0%
TTTGTTACACATATAGACCC+TGG - Chr1:71395848-71395867 None:intergenic 35.0%
! AATGAGCTTATAGCTTGTAC+TGG - Chr1:71390076-71390095 None:intergenic 35.0%
! ACTTTGAGAGGTCTCAAATA+TGG - Chr1:71390713-71390732 None:intergenic 35.0%
! ATGAGTATTGTCAGCTATTG+CGG - Chr1:71393309-71393328 None:intergenic 35.0%
! ATTGTATTGCCACTTATCGT+TGG + Chr1:71396151-71396170 MsG0180003986.01.T01:intron 35.0%
! CTAGGCAATGTTGTTTGAAA+TGG + Chr1:71396694-71396713 MsG0180003986.01.T01:intron 35.0%
! CTGTGCCATTGATATCAATA+AGG + Chr1:71395702-71395721 MsG0180003986.01.T01:intron 35.0%
! CTTCCTTCTGTGTAGATTTT+AGG + Chr1:71396442-71396461 MsG0180003986.01.T01:intron 35.0%
! CTTGTTATATAGTAGCTTCC+AGG - Chr1:71396213-71396232 None:intergenic 35.0%
! CTTTGAGAGGTCTCAAATAT+GGG - Chr1:71390712-71390731 None:intergenic 35.0%
! GCATTTTCAAATACAACCTG+GGG - Chr1:71396611-71396630 None:intergenic 35.0%
! TACTTCTCTAAGAATTGGAG+CGG - Chr1:71393689-71393708 None:intergenic 35.0%
! TTCCGCTCATTTGCTTTATT+AGG - Chr1:71391349-71391368 None:intergenic 35.0%
!! ACCATGGATTTGATTTGAAG+GGG - Chr1:71391671-71391690 None:intergenic 35.0%
!! ATGCAATATGTTGGGTTAGT+TGG + Chr1:71393236-71393255 MsG0180003986.01.T01:intron 35.0%
!! CTCAGTTTATTTTCCTCGTA+GGG - Chr1:71390119-71390138 None:intergenic 35.0%
!! CTTGGCCTTATTGATATCAA+TGG - Chr1:71395710-71395729 None:intergenic 35.0%
!! GTACCATGGATTTGATTTGA+AGG - Chr1:71391673-71391692 None:intergenic 35.0%
!! TGCAATATGTTGGGTTAGTT+GGG + Chr1:71393237-71393256 MsG0180003986.01.T01:intron 35.0%
!! TTGAGTTGGAGAATTAGAGT+GGG - Chr1:71391929-71391948 None:intergenic 35.0%
!! TTTCTTATATATGGTGGTGG+TGG + Chr1:71392313-71392332 MsG0180003986.01.T01:CDS 35.0%
!!! ACCCTGGTTTTATACAAGTT+TGG - Chr1:71395832-71395851 None:intergenic 35.0%
!!! AGGCGCTATTTTTGAATCAA+TGG + Chr1:71397128-71397147 MsG0180003986.01.T01:three_prime_UTR 35.0%
!!! ATCTTTTGGCTCGAATATCA+AGG - Chr1:71391557-71391576 None:intergenic 35.0%
!!! ATTAATTTTGAAGTGCCCAC+TGG + Chr1:71389776-71389795 MsG0180003986.01.T01:intron 35.0%
!!! CATCCACTTTTAATTTGCCA+TGG + Chr1:71397088-71397107 MsG0180003986.01.T01:three_prime_UTR 35.0%
!!! CATCTGTTCAGGTTAGTTTT+TGG + Chr1:71395058-71395077 MsG0180003986.01.T01:intron 35.0%
!!! GGTCGATATTTGTTTTACTC+AGG + Chr1:71396741-71396760 MsG0180003986.01.T01:intron 35.0%
!!! TTAATTTTGAAGTGCCCACT+GGG + Chr1:71389777-71389796 MsG0180003986.01.T01:intron 35.0%
!!! TTATGGCTACCTCTAGTTTT+GGG + Chr1:71394474-71394493 MsG0180003986.01.T01:CDS 35.0%
AAAAAGCGGAGTCCAGTTTA+TGG - Chr1:71395165-71395184 None:intergenic 40.0%
AAAAGAAGTAAGTCTGCACG+AGG - Chr1:71393890-71393909 None:intergenic 40.0%
AAAATGAGAGCCTTTCTTGG+AGG + Chr1:71394768-71394787 MsG0180003986.01.T01:CDS 40.0%
AAAGCAGTTTCCAAATCGGT+TGG + Chr1:71391998-71392017 MsG0180003986.01.T01:CDS 40.0%
AACAACTCAGATTCCACTGA+CGG + Chr1:71391587-71391606 MsG0180003986.01.T01:five_prime_UTR 40.0%
AACAGTAGGAAGACCTTGAT+CGG - Chr1:71392176-71392195 None:intergenic 40.0%
AACGAAGAATTGTCAGTCTC+TGG + Chr1:71394503-71394522 MsG0180003986.01.T01:CDS 40.0%
AACTCGTAAGACCGTTGATA+TGG + Chr1:71391223-71391242 MsG0180003986.01.T01:intron 40.0%
AACTTGAAGAAGCCATGAAG+AGG + Chr1:71396846-71396865 MsG0180003986.01.T01:CDS 40.0%
AAGAACCACCAATTCGCTAT+TGG - Chr1:71392224-71392243 None:intergenic 40.0%
AAGGACGAAGAAAAATGCTG+AGG - Chr1:71393785-71393804 None:intergenic 40.0%
AAGTCCAACAAAGACTGAAC+AGG - Chr1:71396289-71396308 None:intergenic 40.0%
AAGTTCAATGCCCACATTCA+GGG - Chr1:71389027-71389046 None:intergenic 40.0%
AATCCTTAGTCAATGCCTTG+AGG + Chr1:71391099-71391118 MsG0180003986.01.T01:intron 40.0%
ACAGCAATGGAAGAAGAAAG+TGG + Chr1:71394070-71394089 MsG0180003986.01.T01:CDS 40.0%
ACTCAACCTAAGGTGAAAGT+TGG - Chr1:71393344-71393363 None:intergenic 40.0%
ACTGTGATTAATGCGCTTCT+TGG + Chr1:71393535-71393554 MsG0180003986.01.T01:CDS 40.0%
ACTTGAAGAAGCCATGAAGA+GGG + Chr1:71396847-71396866 MsG0180003986.01.T01:CDS 40.0%
AGCAAGAAGATCTTCCAATG+TGG - Chr1:71396530-71396549 None:intergenic 40.0%
AGGCCATGGCAAATTAAAAG+TGG - Chr1:71397094-71397113 None:intergenic 40.0%
AGTCCAACAAAGACTGAACA+GGG - Chr1:71396288-71396307 None:intergenic 40.0%
ATCCACTAAATCACGTGTTG+TGG + Chr1:71394909-71394928 MsG0180003986.01.T01:CDS 40.0%
ATCCTTAGTCAATGCCTTGA+GGG + Chr1:71391100-71391119 MsG0180003986.01.T01:intron 40.0%
ATCTGTACTGCAAACCACAT+TGG + Chr1:71396513-71396532 MsG0180003986.01.T01:CDS 40.0%
ATTTCCTGGAATAGGGTTCA+AGG - Chr1:71397166-71397185 None:intergenic 40.0%
CAAATAGGTGCTCTTCATTG+TGG + Chr1:71393047-71393066 MsG0180003986.01.T01:intron 40.0%
CAAGGGAGAACCAAAACATA+AGG - Chr1:71393735-71393754 None:intergenic 40.0%
CAGAGTATAACAGAGGTTGT+GGG + Chr1:71392622-71392641 MsG0180003986.01.T01:CDS 40.0%
CCAACAAGGGAGAATATACA+AGG + Chr1:71395353-71395372 MsG0180003986.01.T01:CDS 40.0%
CCTTGTATATTCTCCCTTGT+TGG - Chr1:71395356-71395375 None:intergenic 40.0%
CTCAAGCCAATTTACTTGCT+CGG + Chr1:71390769-71390788 MsG0180003986.01.T01:intron 40.0%
CTCAAGCTCGTAAAAGCTAT+TGG - Chr1:71394543-71394562 None:intergenic 40.0%
CTGACAAAAAAAGCCTCGTT+TGG - Chr1:71390036-71390055 None:intergenic 40.0%
GAAAAGGAAAGCAGATACCT+TGG + Chr1:71396817-71396836 MsG0180003986.01.T01:CDS 40.0%
GAGAAACTTGTCATACGATG+AGG + Chr1:71392417-71392436 MsG0180003986.01.T01:CDS 40.0%
GAGGAAACAAACTCTATCCA+TGG + Chr1:71394787-71394806 MsG0180003986.01.T01:CDS 40.0%
GATACCTTTGTGAGAGTCAT+TGG + Chr1:71396896-71396915 MsG0180003986.01.T01:CDS 40.0%
GATCTATATGCTCATACCGA+TGG - Chr1:71390389-71390408 None:intergenic 40.0%
GATTGATGAGCCGTTCTTAT+TGG + Chr1:71392905-71392924 MsG0180003986.01.T01:CDS 40.0%
GCAACCTGAATAAATCACAC+TGG - Chr1:71396106-71396125 None:intergenic 40.0%
GGAAGCAATGTCCTTCATTA+AGG + Chr1:71394373-71394392 MsG0180003986.01.T01:CDS 40.0%
GGAATAAGAAGGGGTTGTTA+TGG - Chr1:71391702-71391721 None:intergenic 40.0%
GGGGAATGAAGATAGAAAGA+AGG - Chr1:71391651-71391670 None:intergenic 40.0%
GTATTCCTAGCAACAACAGT+AGG - Chr1:71392190-71392209 None:intergenic 40.0%
GTCATTCTGAATTCTTGAGG+TGG - Chr1:71395019-71395038 None:intergenic 40.0%
GTCCCTAAAATCTACACAGA+AGG - Chr1:71396448-71396467 None:intergenic 40.0%
GTGCGACCCAATTAAAATGA+CGG - Chr1:71391527-71391546 None:intergenic 40.0%
GTTAGGTTCCAATAGCGAAT+TGG + Chr1:71392213-71392232 MsG0180003986.01.T01:CDS 40.0%
GTTGAGTTTCCCAAAACTAG+AGG - Chr1:71394486-71394505 None:intergenic 40.0%
GTTGTTCAACTGAAGTGACT+TGG - Chr1:71395728-71395747 None:intergenic 40.0%
TAGGATTGATCTAGTGGTGA+GGG + Chr1:71394181-71394200 MsG0180003986.01.T01:intron 40.0%
TATAAAGAAAGCTGCACCTC+TGG + Chr1:71392723-71392742 MsG0180003986.01.T01:CDS 40.0%
TCAAACCGTCTTAAAGGTTC+CGG - Chr1:71390948-71390967 None:intergenic 40.0%
TCACAATTCAATGCAGCTTG+AGG + Chr1:71394352-71394371 MsG0180003986.01.T01:intron 40.0%
TCATGTGTCCTGAGTTCTTT+GGG + Chr1:71397033-71397052 MsG0180003986.01.T01:exon 40.0%
TGAAAGACCATTACCAAACG+AGG + Chr1:71390020-71390039 MsG0180003986.01.T01:intron 40.0%
TGAACACCGAGCAAGTAAAT+TGG - Chr1:71390778-71390797 None:intergenic 40.0%
TGAAGATAGAAAGAAGGGAG+AGG - Chr1:71391645-71391664 None:intergenic 40.0%
TGCAAATGATGAGAGAACAC+TGG + Chr1:71392543-71392562 MsG0180003986.01.T01:CDS 40.0%
TGGAAAATGAGAGCCTTTCT+TGG + Chr1:71394765-71394784 MsG0180003986.01.T01:CDS 40.0%
TGGTGAGATGCAAATACAAC+TGG + Chr1:71393427-71393446 MsG0180003986.01.T01:intron 40.0%
TGGTTTCAAATGACAGATGG+AGG + Chr1:71392851-71392870 MsG0180003986.01.T01:intron 40.0%
TGTACAAATCTAGCCACCAA+TGG - Chr1:71392247-71392266 None:intergenic 40.0%
TTCAGTCAAATCCCTCTTCA+TGG - Chr1:71396861-71396880 None:intergenic 40.0%
TTCATGTGTCCTGAGTTCTT+TGG + Chr1:71397032-71397051 MsG0180003986.01.T01:exon 40.0%
TTGGAAGATCTTCTTGCTCT+TGG + Chr1:71396532-71396551 MsG0180003986.01.T01:CDS 40.0%
TTGGATGTACTAGCCATGTT+GGG - Chr1:71395199-71395218 None:intergenic 40.0%
TTTCCCTGTTCAGTCTTTGT+TGG + Chr1:71396282-71396301 MsG0180003986.01.T01:intron 40.0%
TTTGCCAATGACTCTCACAA+AGG - Chr1:71396903-71396922 None:intergenic 40.0%
TTTGGATGTACTAGCCATGT+TGG - Chr1:71395200-71395219 None:intergenic 40.0%
! ACTTCTCTAAGAATTGGAGC+GGG - Chr1:71393688-71393707 None:intergenic 40.0%
! ATTATTGGAAGTGATGGGAG+AGG - Chr1:71391816-71391835 None:intergenic 40.0%
! CTCAGGACACATGAAGATTT+TGG - Chr1:71397027-71397046 None:intergenic 40.0%
! CTTGGAATTTGTTCTGTTGG+CGG + Chr1:71396550-71396569 MsG0180003986.01.T01:CDS 40.0%
! GAGTTTGTTTCCTCCAAGAA+AGG - Chr1:71394781-71394800 None:intergenic 40.0%
! GCCGTTCTTATTGGTTATAG+TGG + Chr1:71392914-71392933 MsG0180003986.01.T01:CDS 40.0%
! GCTCTTGGAATTTGTTCTGT+TGG + Chr1:71396547-71396566 MsG0180003986.01.T01:CDS 40.0%
! GCTTTGAGTTTACTTGCTTC+TGG + Chr1:71392439-71392458 MsG0180003986.01.T01:CDS 40.0%
! TCTCCCTTGTTGGGTATTTT+TGG - Chr1:71395346-71395365 None:intergenic 40.0%
! TGAAGCAAGACTTGTTCACT+AGG - Chr1:71390882-71390901 None:intergenic 40.0%
! TGAGTTGGAGAATTAGAGTG+GGG - Chr1:71391928-71391947 None:intergenic 40.0%
! TGGTTTGCAGAGTATAACAG+AGG + Chr1:71392615-71392634 MsG0180003986.01.T01:CDS 40.0%
! TTCTTCAAGTTCATTCGCCA+AGG - Chr1:71396837-71396856 None:intergenic 40.0%
! TTGGAATTTGTTCTGTTGGC+GGG + Chr1:71396551-71396570 MsG0180003986.01.T01:CDS 40.0%
!! AGCTTCTAGGATTGATCTAG+TGG + Chr1:71394175-71394194 MsG0180003986.01.T01:intron 40.0%
!! AGGAATCTTTTGAGAAGCGA+TGG + Chr1:71395373-71395392 MsG0180003986.01.T01:CDS 40.0%
!! CCATGGATTTGATTTGAAGG+GGG - Chr1:71391670-71391689 None:intergenic 40.0%
!! CTCAACAAATTCTGGTTCCT+GGG + Chr1:71392953-71392972 MsG0180003986.01.T01:intron 40.0%
!! CTTATGGCTACCTCTAGTTT+TGG + Chr1:71394473-71394492 MsG0180003986.01.T01:CDS 40.0%
!! GCTCAGTTTATTTTCCTCGT+AGG - Chr1:71390120-71390139 None:intergenic 40.0%
!! GTGTAGATTTTAGGGACTCT+TGG + Chr1:71396451-71396470 MsG0180003986.01.T01:intron 40.0%
!! GTTGAGTTGGAGAATTAGAG+TGG - Chr1:71391930-71391949 None:intergenic 40.0%
!! TCAGTCTCTGGTTCTCAATA+TGG + Chr1:71394515-71394534 MsG0180003986.01.T01:CDS 40.0%
!! TCTCAACAAATTCTGGTTCC+TGG + Chr1:71392952-71392971 MsG0180003986.01.T01:intron 40.0%
!! TGTGGGTGGATTTGTTAAAC+TGG + Chr1:71392639-71392658 MsG0180003986.01.T01:CDS 40.0%
!! TTTTAATTGGGTCGCACATG+CGG + Chr1:71391530-71391549 MsG0180003986.01.T01:intron 40.0%
!!! ACCTATTTTTGCCTCGTTTG+TGG + Chr1:71392393-71392412 MsG0180003986.01.T01:CDS 40.0%
!!! CCTATTTTTGCCTCGTTTGT+GGG + Chr1:71392394-71392413 MsG0180003986.01.T01:CDS 40.0%
!!! CTATTTTTGCCTCGTTTGTG+GGG + Chr1:71392395-71392414 MsG0180003986.01.T01:CDS 40.0%
AAAACATGTCATACCCTGGG+TGG - Chr1:71394016-71394035 None:intergenic 45.0%
AAACATGTCATACCCTGGGT+GGG - Chr1:71394015-71394034 None:intergenic 45.0%
ACCAAGATCAAGCGCAGAAT+AGG + Chr1:71396927-71396946 MsG0180003986.01.T01:CDS 45.0%
ACCTGAACAGATGACACAGA+AGG - Chr1:71395051-71395070 None:intergenic 45.0%
AGAAGGGGTTGTTATGGAAC+AGG - Chr1:71391696-71391715 None:intergenic 45.0%
AGACTATCGATATGCCAAGC+AGG + Chr1:71394688-71394707 MsG0180003986.01.T01:CDS 45.0%
AGATAGAAAGAAGGGAGAGG+AGG - Chr1:71391642-71391661 None:intergenic 45.0%
AGCGCCAAAAATACCCAACA+AGG + Chr1:71395339-71395358 MsG0180003986.01.T01:CDS 45.0%
AGGTTCCAATAGCGAATTGG+TGG + Chr1:71392216-71392235 MsG0180003986.01.T01:CDS 45.0%
AGTAGGTGGGAGGAATAAGA+AGG - Chr1:71391713-71391732 None:intergenic 45.0%
AGTATAACAGAGGTTGTGGG+TGG + Chr1:71392625-71392644 MsG0180003986.01.T01:CDS 45.0%
AGTCTGTCTGCAATTCCAAC+AGG - Chr1:71394638-71394657 None:intergenic 45.0%
AGTGTACAATGGAGGCAATG+AGG - Chr1:71394240-71394259 None:intergenic 45.0%
AGTTCAATGCCCACATTCAG+GGG - Chr1:71389026-71389045 None:intergenic 45.0%
ATGTCCTTGAACCCTATTCC+AGG + Chr1:71397159-71397178 MsG0180003986.01.T01:three_prime_UTR 45.0%
ATTGTCTGAGTCTTCCTCAG+CGG + Chr1:71396331-71396350 MsG0180003986.01.T01:intron 45.0%
CAAACCGTCTTAAAGGTTCC+GGG - Chr1:71390947-71390966 None:intergenic 45.0%
CAAAGGCAACTTTGCTGATG+TGG + Chr1:71395677-71395696 MsG0180003986.01.T01:intron 45.0%
CACATGAAGCCAACGATAAG+TGG - Chr1:71396163-71396182 None:intergenic 45.0%
CCCACAAACGAGGCAAAAAT+AGG - Chr1:71392397-71392416 None:intergenic 45.0%
CCCCCTTCAAATCAAATCCA+TGG + Chr1:71391667-71391686 MsG0180003986.01.T01:exon 45.0%
CTAAAGAAAGGGGATCAAGC+TGG + Chr1:71395447-71395466 MsG0180003986.01.T01:CDS 45.0%
CTACTACGGTGACAACAAAG+AGG - Chr1:71390546-71390565 None:intergenic 45.0%
CTAGGATTGATCTAGTGGTG+AGG + Chr1:71394180-71394199 MsG0180003986.01.T01:intron 45.0%
CTCCACAACACGTGATTTAG+TGG - Chr1:71394914-71394933 None:intergenic 45.0%
CTGGTTCCTGGGATATACAT+TGG + Chr1:71392964-71392983 MsG0180003986.01.T01:intron 45.0%
CTTGCAAGATCAACTTGGCA+TGG - Chr1:71388987-71389006 None:intergenic 45.0%
GAAGGGGTTGTTATGGAACA+GGG - Chr1:71391695-71391714 None:intergenic 45.0%
GAAGTTCAATGCCCACATTC+AGG - Chr1:71389028-71389047 None:intergenic 45.0%
GAATCTGATCGGAGTTGAGT+TGG - Chr1:71391943-71391962 None:intergenic 45.0%
GATAGAAAGAAGGGAGAGGA+GGG - Chr1:71391641-71391660 None:intergenic 45.0%
GATGCATGGTTAATGCATGC+GGG + Chr1:71390311-71390330 MsG0180003986.01.T01:intron 45.0%
GCAGAGTATAACAGAGGTTG+TGG + Chr1:71392621-71392640 MsG0180003986.01.T01:CDS 45.0%
GCCACGTGTAAGAATCTGAT+CGG - Chr1:71391954-71391973 None:intergenic 45.0%
GCGCCAAAAATACCCAACAA+GGG + Chr1:71395340-71395359 MsG0180003986.01.T01:CDS 45.0%
GGATGCATGGTTAATGCATG+CGG + Chr1:71390310-71390329 MsG0180003986.01.T01:intron 45.0%
GGGGACATCCAAAGAAAAAG+CGG - Chr1:71395179-71395198 None:intergenic 45.0%
GGTAGTATGCATGAGGTCTT+AGG + Chr1:71394208-71394227 MsG0180003986.01.T01:intron 45.0%
GGTGATCTATGATGCTAGAG+AGG + Chr1:71396011-71396030 MsG0180003986.01.T01:intron 45.0%
GTAGGTGGGAGGAATAAGAA+GGG - Chr1:71391712-71391731 None:intergenic 45.0%
GTCCTCAGACACATATCCAT+CGG + Chr1:71390370-71390389 MsG0180003986.01.T01:intron 45.0%
GTCTTCCTACTGTTGTTGCT+AGG + Chr1:71392182-71392201 MsG0180003986.01.T01:CDS 45.0%
GTTTAGTGACATAGTGGTGG+TGG - Chr1:71396404-71396423 None:intergenic 45.0%
TACCGATGGATATGTGTCTG+AGG - Chr1:71390375-71390394 None:intergenic 45.0%
TAGGTGGGAGGAATAAGAAG+GGG - Chr1:71391711-71391730 None:intergenic 45.0%
TATTGCAGCCAAATCCTGCT+TGG - Chr1:71394705-71394724 None:intergenic 45.0%
TCCGATCAGATTCTTACACG+TGG + Chr1:71391950-71391969 MsG0180003986.01.T01:CDS 45.0%
TCCTTCTGTGTCATCTGTTC+AGG + Chr1:71395047-71395066 MsG0180003986.01.T01:CDS 45.0%
TCGATATGCCAAGCAGGATT+TGG + Chr1:71394694-71394713 MsG0180003986.01.T01:CDS 45.0%
TCTTGCTTAAAGAGAGGCCA+TGG - Chr1:71397108-71397127 None:intergenic 45.0%
TGAGCAAGAAGTTCGTGAGA+TGG + Chr1:71395518-71395537 MsG0180003986.01.T01:CDS 45.0%
TGATCTAGTGGTGAGGGATT+GGG + Chr1:71394187-71394206 MsG0180003986.01.T01:intron 45.0%
TGGATGTACTAGCCATGTTG+GGG - Chr1:71395198-71395217 None:intergenic 45.0%
TGGCCTCTCTTTAAGCAAGA+AGG + Chr1:71397108-71397127 MsG0180003986.01.T01:three_prime_UTR 45.0%
TGGGTATTACCGAAGCTTCT+AGG + Chr1:71394162-71394181 MsG0180003986.01.T01:intron 45.0%
TTAGGGACTCTTGGTCAACT+AGG + Chr1:71396460-71396479 MsG0180003986.01.T01:CDS 45.0%
TTCTCGCCATTTCTTCCCTA+AGG + Chr1:71391838-71391857 MsG0180003986.01.T01:CDS 45.0%
TTCTGAATTCTTGAGGTGGC+AGG - Chr1:71395015-71395034 None:intergenic 45.0%
TTCTGCGCTTGATCTTGGTA+AGG - Chr1:71396926-71396945 None:intergenic 45.0%
TTCTTTGGATGTCCCCAACA+TGG + Chr1:71395183-71395202 MsG0180003986.01.T01:intron 45.0%
TTGATCTAGTGGTGAGGGAT+TGG + Chr1:71394186-71394205 MsG0180003986.01.T01:intron 45.0%
TTTCGAATTTCCCATCTCGG+AGG + Chr1:71396774-71396793 MsG0180003986.01.T01:CDS 45.0%
! AGCAAGACTTGTTCACTAGG+TGG - Chr1:71390879-71390898 None:intergenic 45.0%
! ATTGGTGGTTCTTCCATTGG+TGG + Chr1:71392231-71392250 MsG0180003986.01.T01:CDS 45.0%
! CGAATTGGTGGTTCTTCCAT+TGG + Chr1:71392228-71392247 MsG0180003986.01.T01:CDS 45.0%
! TAGAGTGGGGACTTTGAGTT+CGG - Chr1:71391915-71391934 None:intergenic 45.0%
! TGTTATGGAACAGGGTACCA+TGG - Chr1:71391687-71391706 None:intergenic 45.0%
! TTACTTGCTTCTGGTGCTAG+TGG + Chr1:71392448-71392467 MsG0180003986.01.T01:CDS 45.0%
! TTTTCCTCGTAGGGTCTGTT+TGG - Chr1:71390110-71390129 None:intergenic 45.0%
!! CTTATATATGGTGGTGGTGG+TGG + Chr1:71392316-71392335 MsG0180003986.01.T01:CDS 45.0%
!!! ACTGGACTCCGCTTTTTCTT+TGG + Chr1:71395168-71395187 MsG0180003986.01.T01:intron 45.0%
!! ATACTTTATAAAATATTAAA+GGG + Chr1:71389576-71389595 MsG0180003986.01.T01:intron 5.0%
!! TATACTTTATAAAATATTAA+AGG + Chr1:71389575-71389594 MsG0180003986.01.T01:intron 5.0%
!!! ATTATTAAATTAGTTTTTTT+TGG + Chr1:71389515-71389534 MsG0180003986.01.T01:intron 5.0%
!!! TTTTTTTTATTTTATCTTAT+GGG - Chr1:71389639-71389658 None:intergenic 5.0%
ACAGTGTACTTACCCACCCA+GGG + Chr1:71394000-71394019 MsG0180003986.01.T01:intron 50.0%
AGAAAACTCGTGTGACGCAC+GGG - Chr1:71391172-71391191 None:intergenic 50.0%
AGGTGTGGATAGCGAGAGAA+GGG - Chr1:71391770-71391789 None:intergenic 50.0%
ATCGGAGAGTAAAACGCCAC+TGG - Chr1:71392158-71392177 None:intergenic 50.0%
CAACCTAGAACACTCTTCCC+CGG + Chr1:71391875-71391894 MsG0180003986.01.T01:CDS 50.0%
CAAGTTTCTCCCCACAAACG+AGG - Chr1:71392407-71392426 None:intergenic 50.0%
CTTACCAAACAGACCCTACG+AGG + Chr1:71390103-71390122 MsG0180003986.01.T01:intron 50.0%
CTTGGGCCTTAGGGAAGAAA+TGG - Chr1:71391847-71391866 None:intergenic 50.0%
GACTCTTGGTCAACTAGGAG+TGG + Chr1:71396465-71396484 MsG0180003986.01.T01:CDS 50.0%
GAGAAAACTCGTGTGACGCA+CGG - Chr1:71391173-71391192 None:intergenic 50.0%
GAGAGAACACTGGATGATCG+TGG + Chr1:71392553-71392572 MsG0180003986.01.T01:CDS 50.0%
GCCTATTCTGCGCTTGATCT+TGG - Chr1:71396931-71396950 None:intergenic 50.0%
GCGCCTTCTTGCTTAAAGAG+AGG - Chr1:71397114-71397133 None:intergenic 50.0%
GGGATTGGGTAGTATGCATG+AGG + Chr1:71394201-71394220 MsG0180003986.01.T01:intron 50.0%
GTTCAATGCCCACATTCAGG+GGG - Chr1:71389025-71389044 None:intergenic 50.0%
TACAGTGTACTTACCCACCC+AGG + Chr1:71393999-71394018 MsG0180003986.01.T01:intron 50.0%
TCAGCTGATCGCCCTTTAAC+TGG + Chr1:71393917-71393936 MsG0180003986.01.T01:CDS 50.0%
TCGCAGGGATGGATAGAATG+AGG + Chr1:71394597-71394616 MsG0180003986.01.T01:CDS 50.0%
TCGCCCTTTAACTGGAAGTG+AGG + Chr1:71393925-71393944 MsG0180003986.01.T01:CDS 50.0%
TGACATGTGGAATTCCGTCC+CGG + Chr1:71390926-71390945 MsG0180003986.01.T01:intron 50.0%
TGTCAGGGGGAATTCAACTC+TGG + Chr1:71393505-71393524 MsG0180003986.01.T01:intron 50.0%
! AATGGAGAGTGCGGCGAAAA+GGG - Chr1:71391793-71391812 None:intergenic 50.0%
! AGAGCGCTTTATGATTCCCC+AGG + Chr1:71396592-71396611 MsG0180003986.01.T01:intron 50.0%
! AGAGTGGGGACTTTGAGTTC+GGG - Chr1:71391914-71391933 None:intergenic 50.0%
! AGAGTGTTCTAGGTTGGGGT+TGG - Chr1:71391871-71391890 None:intergenic 50.0%
! CTCTAAGAATTGGAGCGGGA+AGG - Chr1:71393684-71393703 None:intergenic 50.0%
! GAGTGTTCTAGGTTGGGGTT+GGG - Chr1:71391870-71391889 None:intergenic 50.0%
! GGCGTTTTACTCTCCGATCA+AGG + Chr1:71392160-71392179 MsG0180003986.01.T01:CDS 50.0%
! TGGAAGTGATGGGAGAGGAA+TGG - Chr1:71391811-71391830 None:intergenic 50.0%
!! CGCTGTGAAAGGTATCCAGA+TGG + Chr1:71393643-71393662 MsG0180003986.01.T01:CDS 50.0%
!! GGGAAGAGTGTTCTAGGTTG+GGG - Chr1:71391875-71391894 None:intergenic 50.0%
!! GGGGAAGAGTGTTCTAGGTT+GGG - Chr1:71391876-71391895 None:intergenic 50.0%
!! TGCCCTCAAGGCATTGACTA+AGG - Chr1:71391105-71391124 None:intergenic 50.0%
!! TTAACGTTTTCTGGCACCCC+TGG + Chr1:71396192-71396211 MsG0180003986.01.T01:intron 50.0%
AACGCCACTGGTAACAGCAG+CGG - Chr1:71392146-71392165 None:intergenic 55.0%
AGAAAGAAGGGAGAGGAGGG+AGG - Chr1:71391638-71391657 None:intergenic 55.0%
AGAGAAGCTCCCCCTGAATG+TGG + Chr1:71389013-71389032 MsG0180003986.01.T01:intron 55.0%
AGAGCAGATCGAGCAGACAC+AGG - Chr1:71394443-71394462 None:intergenic 55.0%
AGGAGGGAGGGAGATATGGA+TGG - Chr1:71391625-71391644 None:intergenic 55.0%
AGGGGATCAAGCTGGCTATC+AGG + Chr1:71395455-71395474 MsG0180003986.01.T01:CDS 55.0%
ATGGTAGGGAGGGGTGAAGA+AGG - Chr1:71391737-71391756 None:intergenic 55.0%
CCGTCTTAAAGGTTCCGGGA+CGG - Chr1:71390943-71390962 None:intergenic 55.0%
CGAATTTCCCATCTCGGAGG+CGG + Chr1:71396777-71396796 MsG0180003986.01.T01:CDS 55.0%
CTCTTCCAGCAACACCCAGT+GGG - Chr1:71389794-71389813 None:intergenic 55.0%
CTTGGTCAACTAGGAGTGGC+TGG + Chr1:71396469-71396488 MsG0180003986.01.T01:CDS 55.0%
CTTGTTAACCGGTGCCCTCA+AGG - Chr1:71391117-71391136 None:intergenic 55.0%
GAAAGAAGGGAGAGGAGGGA+GGG - Chr1:71391637-71391656 None:intergenic 55.0%
GAGAAGCTCCCCCTGAATGT+GGG + Chr1:71389014-71389033 MsG0180003986.01.T01:intron 55.0%
GAGACAGCAGCGTCTTACAG+AGG + Chr1:71393856-71393875 MsG0180003986.01.T01:CDS 55.0%
GAGGCGGCGTGTGATAGATA+AGG + Chr1:71396793-71396812 MsG0180003986.01.T01:CDS 55.0%
GAGGTGTGGATAGCGAGAGA+AGG - Chr1:71391771-71391790 None:intergenic 55.0%
GATGGATGACTCTCCGTCAG+TGG - Chr1:71391603-71391622 None:intergenic 55.0%
GGGAGGGAGATATGGATGGA+TGG - Chr1:71391621-71391640 None:intergenic 55.0%
GGGTGAAGAAGGGAGTAGGT+GGG - Chr1:71391726-71391745 None:intergenic 55.0%
GGTGTAAGGGATGGTAGGGA+GGG - Chr1:71391747-71391766 None:intergenic 55.0%
GGTGTGGATAGCGAGAGAAG+GGG - Chr1:71391769-71391788 None:intergenic 55.0%
GTGTAAGGGATGGTAGGGAG+GGG - Chr1:71391746-71391765 None:intergenic 55.0%
GTGTGGATAGCGAGAGAAGG+GGG - Chr1:71391768-71391787 None:intergenic 55.0%
TAGATGGGTCGACGATCGCA+GGG + Chr1:71394582-71394601 MsG0180003986.01.T01:CDS 55.0%
TGAAGAAGGGAGTAGGTGGG+AGG - Chr1:71391723-71391742 None:intergenic 55.0%
TGGGAGAGGAATGGAGAGTG+CGG - Chr1:71391802-71391821 None:intergenic 55.0%
TGGTAGGGAGGGGTGAAGAA+GGG - Chr1:71391736-71391755 None:intergenic 55.0%
! AAGGGGGTGTAAGGGATGGT+AGG - Chr1:71391752-71391771 None:intergenic 55.0%
! AGAGAAGGGGGTGTAAGGGA+TGG - Chr1:71391756-71391775 None:intergenic 55.0%
! AGCGAGAGAAGGGGGTGTAA+GGG - Chr1:71391760-71391779 None:intergenic 55.0%
! AGGGGGTGTAAGGGATGGTA+GGG - Chr1:71391751-71391770 None:intergenic 55.0%
! AGTCAATGCCTTGAGGGCAC+CGG + Chr1:71391106-71391125 MsG0180003986.01.T01:intron 55.0%
! CCGTCCCGGAACCTTTAAGA+CGG + Chr1:71390940-71390959 MsG0180003986.01.T01:intron 55.0%
! GAATGGAGAGTGCGGCGAAA+AGG - Chr1:71391794-71391813 None:intergenic 55.0%
! GAGTGGGGACTTTGAGTTCG+GGG - Chr1:71391913-71391932 None:intergenic 55.0%
! TAGCGAGAGAAGGGGGTGTA+AGG - Chr1:71391761-71391780 None:intergenic 55.0%
! TCTAGGTTGGGGTTGGGCTT+GGG - Chr1:71391864-71391883 None:intergenic 55.0%
! TTCTAGGTTGGGGTTGGGCT+TGG - Chr1:71391865-71391884 None:intergenic 55.0%
!! CGGGGAAGAGTGTTCTAGGT+TGG - Chr1:71391877-71391896 None:intergenic 55.0%
CCTAGAACACTCTTCCCCGG+CGG + Chr1:71391878-71391897 MsG0180003986.01.T01:CDS 60.0%
CCTCTTCCAGCAACACCCAG+TGG - Chr1:71389795-71389814 None:intergenic 60.0%
CTAGATGGGTCGACGATCGC+AGG + Chr1:71394581-71394600 MsG0180003986.01.T01:CDS 60.0%
GGAGAGGAGGGAGGGAGATA+TGG - Chr1:71391629-71391648 None:intergenic 60.0%
GGAGGGGTGAAGAAGGGAGT+AGG - Chr1:71391730-71391749 None:intergenic 60.0%
GGGGTGAAGAAGGGAGTAGG+TGG - Chr1:71391727-71391746 None:intergenic 60.0%
GGGTGTAAGGGATGGTAGGG+AGG - Chr1:71391748-71391767 None:intergenic 60.0%
! AAGTGCCCACTGGGTGTTGC+TGG + Chr1:71389786-71389805 MsG0180003986.01.T01:intron 60.0%
! TTCGGGGCGTTTGTAACCGC+CGG - Chr1:71391897-71391916 None:intergenic 60.0%
!! CCACTGGGTGTTGCTGGAAG+AGG + Chr1:71389792-71389811 MsG0180003986.01.T01:intron 60.0%
!! TGGTGGTGGTGGTGGCGATA+TGG + Chr1:71392324-71392343 MsG0180003986.01.T01:CDS 60.0%
ATCACACGCCGCCTCCGAGA+TGG - Chr1:71396788-71396807 None:intergenic 65.0%
GCTGCCGCTGCTGTTACCAG+TGG + Chr1:71392139-71392158 MsG0180003986.01.T01:CDS 65.0%
GGGGTTGGGCTTGGGCCTTA+GGG - Chr1:71391856-71391875 None:intergenic 65.0%
GTGCGGCGAAAAGGGAGGTG+TGG - Chr1:71391785-71391804 None:intergenic 65.0%
TCACACGCCGCCTCCGAGAT+GGG - Chr1:71396787-71396806 None:intergenic 65.0%
TGGGGTTGGGCTTGGGCCTT+AGG - Chr1:71391857-71391876 None:intergenic 65.0%
TGGGTCGACGATCGCAGGGA+TGG + Chr1:71394586-71394605 MsG0180003986.01.T01:CDS 65.0%
! GGAGAGTGCGGCGAAAAGGG+AGG - Chr1:71391790-71391809 None:intergenic 65.0%
! TCGGGGCGTTTGTAACCGCC+GGG - Chr1:71391896-71391915 None:intergenic 65.0%
!! CCGCCGGGGAAGAGTGTTCT+AGG - Chr1:71391881-71391900 None:intergenic 65.0%
! CGGGGCGTTTGTAACCGCCG+GGG - Chr1:71391895-71391914 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 71388951 71397348 71388951 ID=MsG0180003986.01;Name=MsG0180003986.01
Chr1 mRNA 71388951 71397348 71388951 ID=MsG0180003986.01.T01;Parent=MsG0180003986.01;Name=MsG0180003986.01.T01;_AED=0.22;_eAED=0.22;_QI=285|0.90|0.91|1|0.81|0.75|12|303|925
Chr1 exon 71388951 71388970 71388951 ID=MsG0180003986.01.T01:exon:30790;Parent=MsG0180003986.01.T01
Chr1 exon 71391393 71391518 71391393 ID=MsG0180003986.01.T01:exon:30791;Parent=MsG0180003986.01.T01
Chr1 exon 71391547 71392744 71391547 ID=MsG0180003986.01.T01:exon:30792;Parent=MsG0180003986.01.T01
Chr1 exon 71392867 71392935 71392867 ID=MsG0180003986.01.T01:exon:30793;Parent=MsG0180003986.01.T01
Chr1 exon 71393511 71393705 71393511 ID=MsG0180003986.01.T01:exon:30794;Parent=MsG0180003986.01.T01
Chr1 exon 71393815 71393946 71393815 ID=MsG0180003986.01.T01:exon:30795;Parent=MsG0180003986.01.T01
Chr1 exon 71394050 71394136 71394050 ID=MsG0180003986.01.T01:exon:30796;Parent=MsG0180003986.01.T01
Chr1 exon 71394368 71394808 71394368 ID=MsG0180003986.01.T01:exon:30797;Parent=MsG0180003986.01.T01
Chr1 exon 71394904 71395068 71394904 ID=MsG0180003986.01.T01:exon:30798;Parent=MsG0180003986.01.T01
Chr1 exon 71395309 71395539 71395309 ID=MsG0180003986.01.T01:exon:30799;Parent=MsG0180003986.01.T01
Chr1 exon 71396457 71396572 71396457 ID=MsG0180003986.01.T01:exon:30800;Parent=MsG0180003986.01.T01
Chr1 exon 71396763 71397348 71396763 ID=MsG0180003986.01.T01:exon:30801;Parent=MsG0180003986.01.T01
Chr1 five_prime_UTR 71388951 71388970 71388951 ID=MsG0180003986.01.T01:five_prime_utr;Parent=MsG0180003986.01.T01
Chr1 five_prime_UTR 71391393 71391518 71391393 ID=MsG0180003986.01.T01:five_prime_utr;Parent=MsG0180003986.01.T01
Chr1 five_prime_UTR 71391547 71391685 71391547 ID=MsG0180003986.01.T01:five_prime_utr;Parent=MsG0180003986.01.T01
Chr1 CDS 71391686 71392744 71391686 ID=MsG0180003986.01.T01:cds;Parent=MsG0180003986.01.T01
Chr1 CDS 71392867 71392935 71392867 ID=MsG0180003986.01.T01:cds;Parent=MsG0180003986.01.T01
Chr1 CDS 71393511 71393705 71393511 ID=MsG0180003986.01.T01:cds;Parent=MsG0180003986.01.T01
Chr1 CDS 71393815 71393946 71393815 ID=MsG0180003986.01.T01:cds;Parent=MsG0180003986.01.T01
Chr1 CDS 71394050 71394136 71394050 ID=MsG0180003986.01.T01:cds;Parent=MsG0180003986.01.T01
Chr1 CDS 71394368 71394808 71394368 ID=MsG0180003986.01.T01:cds;Parent=MsG0180003986.01.T01
Chr1 CDS 71394904 71395068 71394904 ID=MsG0180003986.01.T01:cds;Parent=MsG0180003986.01.T01
Chr1 CDS 71395309 71395539 71395309 ID=MsG0180003986.01.T01:cds;Parent=MsG0180003986.01.T01
Chr1 CDS 71396457 71396572 71396457 ID=MsG0180003986.01.T01:cds;Parent=MsG0180003986.01.T01
Chr1 CDS 71396763 71397045 71396763 ID=MsG0180003986.01.T01:cds;Parent=MsG0180003986.01.T01
Chr1 three_prime_UTR 71397046 71397348 71397046 ID=MsG0180003986.01.T01:three_prime_utr;Parent=MsG0180003986.01.T01
Gene Sequence

>MsG0180003986.01.T01

ATGGTACCCTGTTCCATAACAACCCCTTCTTATTCCTCCCACCTACTCCCTTCTTCACCCCTCCCTACCATCCCTTACACCCCCTTCTCTCGCTATCCACACCTCCCTTTTCGCCGCACTCTCCATTCCTCTCCCATCACTTCCAATAATGTTTCTCGCCATTTCTTCCCTAAGGCCCAAGCCCAACCCCAACCTAGAACACTCTTCCCCGGCGGTTACAAACGCCCCGAACTCAAAGTCCCCACTCTAATTCTCCAACTCAACTCCGATCAGATTCTTACACGTGGCGAATCCGCACTAGACTTGATTGATAAAGCAGTTTCCAAATCGGTTGGAATTGTGATTCTAACTAGTAATGAACAAAGTGGTGGTAAACTCTACGAAGCTGCTTGTTTGTTGAAATCACTTATTCGTGATCGCGCTTATTTGTTAGTTGCTGAGCGTGTTGATATTGCTGCCGCTGCTGTTACCAGTGGCGTTTTACTCTCCGATCAAGGTCTTCCTACTGTTGTTGCTAGGAATACAATGTTAGGTTCCAATAGCGAATTGGTGGTTCTTCCATTGGTGGCTAGATTTGTACAAACTGTAGATGCTGCTGTAAATGCATCGAAATCTGAAGGTGCTGATTTTCTTATATATGGTGGTGGTGGTGGCGATATGGAACTTTTAAATCAGGAAATTGGCAATGTAGTTGAGAATGTGAAGATACCTATTTTTGCCTCGTTTGTGGGGAGAAACTTGTCATACGATGAGGCTTTGAGTTTACTTGCTTCTGGTGCTAGTGGTTTTGTTACTAGTTTGGAAAGTTTTGGGTTGTTTGATGATGATTTGCTTCGTAAATTATTTGATGGTGGGTTTGCAAATGATGAGAGAACACTGGATGATCGTGGTGATAAAATTGATGATGATAAATTAGTCAATGAGAGTAATGGTTTGCAGAGTATAACAGAGGTTGTGGGTGGATTTGTTAAACTGGAAGATAGGGAGAAACAGTTAATAGAAATGGAGAGGTCGGTGTTGAATGAAGCTATTGAAGTTATAAAGAAAGCTGCACCTCTGATGGAGGAAGTTTCGCTTCTTGATGATGCAGTTTCTCAGATTGATGAGCCGTTCTTATTGGTTATAGTGGGGGAATTCAACTCTGGCAAATCTACTGTGATTAATGCGCTTCTTGGAGAAAGATATCTCAAAGACGGGGTTGTTCCAACAACGAATGAGATCACATTTTTACGATATAATAACCTAGATATTGAAAAACAACGCTGTGAAAGGTATCCAGATGGTCAATATATTTGCTACCTTCCCGCTCCAATTCTTAGAGAAATGACAATTGTTGATACACCTGGAACTAATGTAATTCTTCAGAGACAGCAGCGTCTTACAGAGGAATTTGTGCCTCGTGCAGACTTACTTCTTTTTGTTATTTCAGCTGATCGCCCTTTAACTGGAAGTGAGGTTGCTTTTCTTCGTTATTCACAGCAATGGAAGAAGAAAGTGGTCTTTGTTTTGAACAAAGCTGACATTTATCAGAATAATCATGAGCTTGAGGAAGCAATGTCCTTCATTAAGGACAACATAAAGAGATTGTTGAAAACGGAAGATGTGATATTATATCCTGTGTCTGCTCGATCTGCTCTTGAAGCAAAACTTATGGCTACCTCTAGTTTTGGGAAACTCAACGAAGAATTGTCAGTCTCTGGTTCTCAATATGGTCCCAATAGCTTTTACGAGCTTGAGAAATTTTTATATAGCTTTCTAGATGGGTCGACGATCGCAGGGATGGATAGAATGAGGCTTAAACTTGAAACACCTGTTGGAATTGCAGACAGACTGATTTCTGCATGTGAAACTCTTGTGACACAAGACTATCGATATGCCAAGCAGGATTTGGCTGCAATAAACGATGTTGTCAACAGTGTAAATGATTTTGCATTGAATATGGAAAATGAGAGCCTTTCTTGGAGGAAACAAACTCTATCCATGATTGAATCCACTAAATCACGTGTTGTGGAGCTTGTAGAAGCTACAATGCAATTGTCAAATCTTGATATTGTTGTATCATATGTTTTCAAAGGAGAGAAACATGCGACACCTGCCACCTCAAGAATTCAGAATGACATAATTGATCCTTCTGTGTCATCTGTTCAGAAAATACTTGGAGATTACGAAAATTGGTTAAGCGCCAAAAATACCCAACAAGGGAGAATATACAAGGAATCTTTTGAGAAGCGATGGTCCTCATTGATTCATGAAAATAGTCAGAAGAATATTGAGACATATGAGTTGCTAAAGAAAGGGGATCAAGCTGGCTATCAGGTGATTGAAAATTTCAGCAGCAGTGCAGTTTCAAAGTCATTTGAGCAAGAAGTTCGTGAGATGATTTTAGGGACTCTTGGTCAACTAGGAGTGGCTGGTTTTTCTGCTTCACTATTGACATCTGTACTGCAAACCACATTGGAAGATCTTCTTGCTCTTGGAATTTGTTCTGTTGGCGGGTATATAGCTATTTCGAATTTCCCATCTCGGAGGCGGCGTGTGATAGATAAGGTGAAAAGGAAAGCAGATACCTTGGCGAATGAACTTGAAGAAGCCATGAAGAGGGATTTGACTGAAGCAGTAGAAAATTTGGATACCTTTGTGAGAGTCATTGGCAAACCTTACCAAGATCAAGCGCAGAATAGGCTAAACAAGCTAGTTGAGATTCAAGAAGAAATATCAAATATTGAAAAGAAACTTAGAACACTACAAATTGATATCCAAAATCTTCATGTGTCCTGA

Protein sequence

>MsG0180003986.01.T01

MVPCSITTPSYSSHLLPSSPLPTIPYTPFSRYPHLPFRRTLHSSPITSNNVSRHFFPKAQAQPQPRTLFPGGYKRPELKVPTLILQLNSDQILTRGESALDLIDKAVSKSVGIVILTSNEQSGGKLYEAACLLKSLIRDRAYLLVAERVDIAAAAVTSGVLLSDQGLPTVVARNTMLGSNSELVVLPLVARFVQTVDAAVNASKSEGADFLIYGGGGGDMELLNQEIGNVVENVKIPIFASFVGRNLSYDEALSLLASGASGFVTSLESFGLFDDDLLRKLFDGGFANDERTLDDRGDKIDDDKLVNESNGLQSITEVVGGFVKLEDREKQLIEMERSVLNEAIEVIKKAAPLMEEVSLLDDAVSQIDEPFLLVIVGEFNSGKSTVINALLGERYLKDGVVPTTNEITFLRYNNLDIEKQRCERYPDGQYICYLPAPILREMTIVDTPGTNVILQRQQRLTEEFVPRADLLLFVISADRPLTGSEVAFLRYSQQWKKKVVFVLNKADIYQNNHELEEAMSFIKDNIKRLLKTEDVILYPVSARSALEAKLMATSSFGKLNEELSVSGSQYGPNSFYELEKFLYSFLDGSTIAGMDRMRLKLETPVGIADRLISACETLVTQDYRYAKQDLAAINDVVNSVNDFALNMENESLSWRKQTLSMIESTKSRVVELVEATMQLSNLDIVVSYVFKGEKHATPATSRIQNDIIDPSVSSVQKILGDYENWLSAKNTQQGRIYKESFEKRWSSLIHENSQKNIETYELLKKGDQAGYQVIENFSSSAVSKSFEQEVREMILGTLGQLGVAGFSASLLTSVLQTTLEDLLALGICSVGGYIAISNFPSRRRRVIDKVKRKADTLANELEEAMKRDLTEAVENLDTFVRVIGKPYQDQAQNRLNKLVEIQEEISNIEKKLRTLQIDIQNLHVS*