Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0649020 | AES89723.2 | 90.196 | 306 | 7 | 3 | 1 | 306 | 1 | 283 | 0.0 | 548 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0649020 | sp|Q9UTE6|MAK16_SCHPO | 57.812 | 192 | 79 | 1 | 1 | 192 | 1 | 190 | 1.00e-72 | 229 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0649020 | G7JUY3 | 90.196 | 306 | 7 | 3 | 1 | 306 | 1 | 283 | 0.0 | 548 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003720 | Msa0649020 | 0.819393 | 1.189147e-52 | -8.615850e-47 |
| Msa0003780 | Msa0649020 | 0.824007 | 1.019184e-53 | -8.615850e-47 |
| Msa0003890 | Msa0649020 | 0.813727 | 2.211243e-51 | -8.615850e-47 |
| Msa0011960 | Msa0649020 | 0.828224 | 1.012562e-54 | -8.615850e-47 |
| Msa0012080 | Msa0649020 | 0.800358 | 1.496254e-48 | -8.615850e-47 |
| Msa0026710 | Msa0649020 | 0.807243 | 5.560434e-50 | -8.615850e-47 |
| Msa0027260 | Msa0649020 | 0.811570 | 6.553921e-51 | -8.615850e-47 |
| Msa0029270 | Msa0649020 | 0.804126 | 2.508877e-49 | -8.615850e-47 |
| Msa0030200 | Msa0649020 | 0.804412 | 2.187159e-49 | -8.615850e-47 |
| Msa0032090 | Msa0649020 | 0.866352 | 3.036953e-65 | -8.615850e-47 |
| Msa0032430 | Msa0649020 | 0.868739 | 5.218517e-66 | -8.615850e-47 |
| Msa0032580 | Msa0649020 | 0.824579 | 7.479549e-54 | -8.615850e-47 |
| Msa0033110 | Msa0649020 | 0.850107 | 2.102798e-60 | -8.615850e-47 |
| Msa0033260 | Msa0649020 | 0.852430 | 4.641472e-61 | -8.615850e-47 |
| Msa0040690 | Msa0649020 | 0.843523 | 1.329527e-58 | -8.615850e-47 |
| Msa0043660 | Msa0649020 | 0.820365 | 7.128391e-53 | -8.615850e-47 |
| Msa0047160 | Msa0649020 | 0.844138 | 9.099659e-59 | -8.615850e-47 |
| Msa0049370 | Msa0649020 | 0.808056 | 3.735076e-50 | -8.615850e-47 |
| Msa0054440 | Msa0649020 | 0.829747 | 4.330404e-55 | -8.615850e-47 |
| Msa0054480 | Msa0649020 | 0.847416 | 1.172945e-59 | -8.615850e-47 |
| Msa0059040 | Msa0649020 | 0.826790 | 2.235442e-54 | -8.615850e-47 |
| Msa0059110 | Msa0649020 | 0.843653 | 1.227769e-58 | -8.615850e-47 |
| Msa0063530 | Msa0649020 | 0.825409 | 4.762168e-54 | -8.615850e-47 |
| Msa0070700 | Msa0649020 | 0.851870 | 6.693669e-61 | -8.615850e-47 |
| Msa0075220 | Msa0649020 | 0.800154 | 1.646659e-48 | -8.615850e-47 |
| Msa0079380 | Msa0649020 | 0.864794 | 9.407160e-65 | -8.615850e-47 |
| Msa0079820 | Msa0649020 | 0.807411 | 5.120826e-50 | -8.615850e-47 |
| Msa0086750 | Msa0649020 | 0.815188 | 1.050554e-51 | -8.615850e-47 |
| Msa0090360 | Msa0649020 | 0.812585 | 3.938006e-51 | -8.615850e-47 |
| Msa0090520 | Msa0649020 | 0.810687 | 1.018444e-50 | -8.615850e-47 |
| Msa0091410 | Msa0649020 | 0.851986 | 6.206310e-61 | -8.615850e-47 |
| Msa0094470 | Msa0649020 | 0.860233 | 2.383260e-63 | -8.615850e-47 |
| Msa0100740 | Msa0649020 | 0.813311 | 2.729583e-51 | -8.615850e-47 |
| Msa0105370 | Msa0649020 | 0.801731 | 7.840288e-49 | -8.615850e-47 |
| Msa0105620 | Msa0649020 | 0.805659 | 1.199682e-49 | -8.615850e-47 |
| Msa0115130 | Msa0649020 | 0.810650 | 1.037484e-50 | -8.615850e-47 |
| Msa0115400 | Msa0649020 | 0.823869 | 1.098153e-53 | -8.615850e-47 |
| Msa0118590 | Msa0649020 | 0.847802 | 9.185567e-60 | -8.615850e-47 |
| Msa0608500 | Msa0649020 | 0.930218 | 2.253945e-93 | -8.615850e-47 |
| Msa0615440 | Msa0649020 | 0.829413 | 5.220388e-55 | -8.615850e-47 |
| Msa0615710 | Msa0649020 | 0.808213 | 3.458075e-50 | -8.615850e-47 |
| Msa0623790 | Msa0649020 | 0.807866 | 4.099045e-50 | -8.615850e-47 |
| Msa0625720 | Msa0649020 | 0.846900 | 1.624156e-59 | -8.615850e-47 |
| Msa0626630 | Msa0649020 | 0.820450 | 6.816635e-53 | -8.615850e-47 |
| Msa0636070 | Msa0649020 | 0.800520 | 1.386783e-48 | -8.615850e-47 |
| Msa0643560 | Msa0649020 | 0.822992 | 1.760226e-53 | -8.615850e-47 |
| Msa0648780 | Msa0649020 | 0.805953 | 1.040620e-49 | -8.615850e-47 |
| Msa0649020 | Msa0649050 | 0.977517 | 6.122711e-144 | -8.615850e-47 |
| Msa0649020 | Msa0663390 | 0.850803 | 1.340783e-60 | -8.615850e-47 |
| Msa0649020 | Msa0664750 | 0.811287 | 7.549138e-51 | -8.615850e-47 |
| Msa0649020 | Msa0685140 | 0.804122 | 2.513484e-49 | -8.615850e-47 |
| Msa0649020 | Msa0689260 | 0.858056 | 1.070243e-62 | -8.615850e-47 |
| Msa0649020 | Msa0691530 | 0.949457 | 1.223311e-107 | -8.615850e-47 |
| Msa0649020 | Msa0692950 | 0.806871 | 6.665357e-50 | -8.615850e-47 |
| Msa0649020 | Msa0698490 | 0.834385 | 3.089740e-56 | -8.615850e-47 |
| Msa0649020 | Msa0698540 | 0.809401 | 1.927052e-50 | -8.615850e-47 |
| Msa0649020 | Msa0698660 | 0.828514 | 8.616692e-55 | -8.615850e-47 |
| Msa0649020 | Msa0698800 | 0.814822 | 1.266759e-51 | -8.615850e-47 |
| Msa0649020 | Msa0707250 | 0.848754 | 5.009483e-60 | -8.615850e-47 |
| Msa0649020 | Msa0711780 | 0.832456 | 9.357827e-56 | -8.615850e-47 |
| Msa0649020 | Msa0715700 | 0.825849 | 3.744961e-54 | -8.615850e-47 |
| Msa0649020 | Msa0757830 | 0.800549 | 1.368363e-48 | -8.615850e-47 |
| Msa0649020 | Msa0788850 | 0.819081 | 1.400809e-52 | -8.615850e-47 |
| Msa0649020 | Msa0793800 | 0.821996 | 2.999954e-53 | -8.615850e-47 |
| Msa0649020 | Msa0794670 | 0.831124 | 1.994176e-55 | -8.615850e-47 |
| Msa0649020 | Msa0796530 | 0.803729 | 3.034117e-49 | -8.615850e-47 |
| Msa0649020 | Msa0808270 | 0.816588 | 5.119274e-52 | -8.615850e-47 |
| Msa0649020 | Msa0830540 | 0.811171 | 7.999884e-51 | -8.615850e-47 |
| Msa0649020 | Msa0831530 | 0.824169 | 9.335882e-54 | -8.615850e-47 |
| Msa0649020 | Msa0871270 | 0.805247 | 1.463962e-49 | -8.615850e-47 |
| Msa0649020 | Msa0876810 | 0.840614 | 7.818218e-58 | -8.615850e-47 |
| Msa0649020 | Msa0892120 | 0.804299 | 2.308803e-49 | -8.615850e-47 |
| Msa0649020 | Msa0902760 | 0.836304 | 1.012067e-56 | -8.615850e-47 |
| Msa0649020 | Msa0945440 | 0.805540 | 1.270876e-49 | -8.615850e-47 |
| Msa0649020 | Msa0987370 | 0.808921 | 2.441493e-50 | -8.615850e-47 |
| Msa0649020 | Msa0989540 | 0.830545 | 2.764734e-55 | -8.615850e-47 |
| Msa0649020 | Msa0999970 | 0.813999 | 1.926162e-51 | -8.615850e-47 |
| Msa0649020 | Msa1006840 | 0.863364 | 2.623953e-64 | -8.615850e-47 |
| Msa0649020 | Msa1013400 | 0.828824 | 7.252659e-55 | -8.615850e-47 |
| Msa0649020 | Msa1043690 | 0.810517 | 1.108075e-50 | -8.615850e-47 |
| Msa0649020 | Msa1051200 | 0.828919 | 6.879132e-55 | -8.615850e-47 |
| Msa0649020 | Msa1077030 | 0.815695 | 8.103882e-52 | -8.615850e-47 |
| Msa0649020 | Msa1080640 | 0.804033 | 2.622436e-49 | -8.615850e-47 |
| Msa0649020 | Msa1081930 | 0.825283 | 5.101159e-54 | -8.615850e-47 |
| Msa0649020 | Msa1081980 | 0.834882 | 2.317736e-56 | -8.615850e-47 |
| Msa0649020 | Msa1082810 | 0.804116 | 2.520270e-49 | -8.615850e-47 |
| Msa0649020 | Msa1088640 | 0.804844 | 1.777692e-49 | -8.615850e-47 |
| Msa0649020 | Msa1093530 | 0.836662 | 8.205970e-57 | -8.615850e-47 |
| Msa0649020 | Msa1104140 | 0.843706 | 1.187871e-58 | -8.615850e-47 |
| Msa0649020 | Msa1104210 | 0.804261 | 2.351977e-49 | -8.615850e-47 |
| Msa0649020 | Msa1106700 | 0.836556 | 8.731463e-57 | -8.615850e-47 |
| Msa0649020 | Msa1109680 | 0.808949 | 2.408912e-50 | -8.615850e-47 |
| Msa0649020 | Msa1121440 | 0.825234 | 5.239629e-54 | -8.615850e-47 |
| Msa0649020 | Msa1135890 | 0.828607 | 8.183374e-55 | -8.615850e-47 |
| Msa0649020 | Msa1147900 | 0.806686 | 7.292991e-50 | -8.615850e-47 |
| Msa0649020 | Msa1147970 | 0.802177 | 6.349275e-49 | -8.615850e-47 |
| Msa0649020 | Msa1148910 | 0.808882 | 2.489780e-50 | -8.615850e-47 |
| Msa0649020 | Msa1160590 | 0.820715 | 5.924022e-53 | -8.615850e-47 |
| Msa0649020 | Msa1162270 | 0.816112 | 6.540181e-52 | -8.615850e-47 |
| Msa0649020 | Msa1162780 | 0.809626 | 1.724477e-50 | -8.615850e-47 |
| Msa0649020 | Msa1165940 | 0.804107 | 2.532093e-49 | -8.615850e-47 |
| Msa0649020 | Msa1167340 | 0.801260 | 9.791760e-49 | -8.615850e-47 |
| Msa0649020 | Msa1181250 | 0.845456 | 4.015398e-59 | -8.615850e-47 |
| Msa0649020 | Msa1181330 | 0.833980 | 3.903206e-56 | -8.615850e-47 |
| Msa0649020 | Msa1181910 | 0.839899 | 1.201951e-57 | -8.615850e-47 |
| Msa0649020 | Msa1207270 | 0.804999 | 1.649308e-49 | -8.615850e-47 |
| Msa0649020 | Msa1208880 | 0.844379 | 7.843475e-59 | -8.615850e-47 |
| Msa0649020 | Msa1209200 | 0.863532 | 2.327855e-64 | -8.615850e-47 |
| Msa0649020 | Msa1209460 | 0.809232 | 2.095299e-50 | -8.615850e-47 |
| Msa0649020 | Msa1218600 | 0.802247 | 6.141812e-49 | -8.615850e-47 |
| Msa0649020 | Msa1237630 | 0.804983 | 1.662633e-49 | -8.615850e-47 |
| Msa0649020 | Msa1245930 | 0.839482 | 1.543741e-57 | -8.615850e-47 |
| Msa0649020 | Msa1254730 | 0.841670 | 4.127002e-58 | -8.615850e-47 |
| Msa0649020 | Msa1259060 | 0.836911 | 7.087565e-57 | -8.615850e-47 |
| Msa0649020 | Msa1265630 | 0.847261 | 1.293099e-59 | -8.615850e-47 |
| Msa0649020 | Msa1294820 | 0.835432 | 1.683791e-56 | -8.615850e-47 |
| Msa0649020 | Msa1302380 | 0.807789 | 4.257375e-50 | -8.615850e-47 |
| Msa0649020 | Msa1330410 | 0.821543 | 3.817771e-53 | -8.615850e-47 |
| Msa0649020 | Msa1332590 | 0.848235 | 6.975087e-60 | -8.615850e-47 |
| Msa0649020 | Msa1358250 | 0.857173 | 1.955120e-62 | -8.615850e-47 |
| Msa0649020 | Msa1370070 | -0.800249 | 1.574589e-48 | -8.615850e-47 |
| Msa0649020 | Msa1374120 | 0.840243 | 9.776284e-58 | -8.615850e-47 |
| Msa0649020 | Msa1382560 | 0.823545 | 1.307748e-53 | -8.615850e-47 |
| Msa0649020 | Msa1382620 | 0.818996 | 1.464397e-52 | -8.615850e-47 |
| Msa0649020 | Msa1389800 | 0.801790 | 7.623510e-49 | -8.615850e-47 |
| Msa0649020 | Msa1392780 | 0.849210 | 3.742414e-60 | -8.615850e-47 |
| Msa0649020 | Msa1393570 | 0.836149 | 1.108574e-56 | -8.615850e-47 |
| Msa0649020 | Msa1394290 | 0.872110 | 4.090270e-67 | -8.615850e-47 |
| Msa0649020 | Msa1394500 | 0.807725 | 4.392428e-50 | -8.615850e-47 |
| Msa0649020 | Msa1400580 | 0.843367 | 1.463707e-58 | -8.615850e-47 |
| Msa0649020 | Msa1403420 | 0.806449 | 8.180752e-50 | -8.615850e-47 |
| Msa0649020 | Msa1419870 | 0.817154 | 3.819818e-52 | -8.615850e-47 |
| Msa0649020 | Msa1423350 | 0.821269 | 4.417499e-53 | -8.615850e-47 |
| Msa0649020 | Msa1432420 | 0.806703 | 7.231949e-50 | -8.615850e-47 |
| Msa0649020 | Msa1432700 | 0.827714 | 1.343134e-54 | -8.615850e-47 |
| Msa0649020 | Msa1433390 | 0.806079 | 9.792145e-50 | -8.615850e-47 |
| Msa0649020 | Msa1439550 | 0.814131 | 1.801401e-51 | -8.615850e-47 |
| Msa0649020 | Msa1440930 | 0.804271 | 2.340619e-49 | -8.615850e-47 |
| Msa0649020 | Msa1444310 | 0.802938 | 4.424231e-49 | -8.615850e-47 |
| Msa0649020 | Msa1446950 | 0.811324 | 7.412314e-51 | -8.615850e-47 |
| Msa0649020 | Msa1451160 | 0.804529 | 2.067948e-49 | -8.615850e-47 |
| Msa0649020 | Msa1457920 | 0.868943 | 4.482987e-66 | -8.615850e-47 |
| Msa0127020 | Msa0649020 | 0.821120 | 4.781203e-53 | -8.615850e-47 |
| Msa0127050 | Msa0649020 | 0.810569 | 1.079697e-50 | -8.615850e-47 |
| Msa0137550 | Msa0649020 | 0.838697 | 2.465494e-57 | -8.615850e-47 |
| Msa0137990 | Msa0649020 | 0.813411 | 2.594804e-51 | -8.615850e-47 |
| Msa0140820 | Msa0649020 | 0.806564 | 7.735665e-50 | -8.615850e-47 |
| Msa0144370 | Msa0649020 | 0.857630 | 1.431732e-62 | -8.615850e-47 |
| Msa0150300 | Msa0649020 | 0.816112 | 6.540586e-52 | -8.615850e-47 |
| Msa0150820 | Msa0649020 | 0.812950 | 3.276090e-51 | -8.615850e-47 |
| Msa0159170 | Msa0649020 | 0.817157 | 3.813706e-52 | -8.615850e-47 |
| Msa0160550 | Msa0649020 | 0.825189 | 5.367950e-54 | -8.615850e-47 |
| Msa0165660 | Msa0649020 | 0.834854 | 2.356179e-56 | -8.615850e-47 |
| Msa0168230 | Msa0649020 | 0.803749 | 3.004774e-49 | -8.615850e-47 |
| Msa0169280 | Msa0649020 | 0.820566 | 6.409545e-53 | -8.615850e-47 |
| Msa0169310 | Msa0649020 | 0.812035 | 5.191774e-51 | -8.615850e-47 |
| Msa0172070 | Msa0649020 | 0.869526 | 2.898634e-66 | -8.615850e-47 |
| Msa0172970 | Msa0649020 | 0.814854 | 1.246385e-51 | -8.615850e-47 |
| Msa0183900 | Msa0649020 | 0.808652 | 2.787285e-50 | -8.615850e-47 |
| Msa0184040 | Msa0649020 | 0.810987 | 8.770362e-51 | -8.615850e-47 |
| Msa0187120 | Msa0649020 | 0.821842 | 3.256075e-53 | -8.615850e-47 |
| Msa0189300 | Msa0649020 | 0.851816 | 6.938009e-61 | -8.615850e-47 |
| Msa0220720 | Msa0649020 | 0.848724 | 5.106198e-60 | -8.615850e-47 |
| Msa0229170 | Msa0649020 | 0.809188 | 2.140357e-50 | -8.615850e-47 |
| Msa0231660 | Msa0649020 | 0.817503 | 3.188415e-52 | -8.615850e-47 |
| Msa0232050 | Msa0649020 | 0.806115 | 9.621761e-50 | -8.615850e-47 |
| Msa0366890 | Msa0649020 | 0.804333 | 2.271534e-49 | -8.615850e-47 |
| Msa0376300 | Msa0649020 | 0.801154 | 1.029323e-48 | -8.615850e-47 |
| Msa0376310 | Msa0649020 | 0.813323 | 2.713081e-51 | -8.615850e-47 |
| Msa0385580 | Msa0649020 | 0.835836 | 1.330664e-56 | -8.615850e-47 |
| Msa0388700 | Msa0649020 | 0.818795 | 1.626351e-52 | -8.615850e-47 |
| Msa0395820 | Msa0649020 | 0.835754 | 1.395856e-56 | -8.615850e-47 |
| Msa0397540 | Msa0649020 | 0.823439 | 1.384356e-53 | -8.615850e-47 |
| Msa0402650 | Msa0649020 | 0.827729 | 1.331785e-54 | -8.615850e-47 |
| Msa0411430 | Msa0649020 | 0.829930 | 3.906342e-55 | -8.615850e-47 |
| Msa0422840 | Msa0649020 | 0.802738 | 4.865252e-49 | -8.615850e-47 |
| Msa0422920 | Msa0649020 | 0.805959 | 1.037765e-49 | -8.615850e-47 |
| Msa0449210 | Msa0649020 | 0.814194 | 1.743973e-51 | -8.615850e-47 |
| Msa0467380 | Msa0649020 | 0.802297 | 5.997917e-49 | -8.615850e-47 |
| Msa0481530 | Msa0649020 | 0.851910 | 6.523933e-61 | -8.615850e-47 |
| Msa0482130 | Msa0649020 | 0.811557 | 6.595543e-51 | -8.615850e-47 |
| Msa0241390 | Msa0649020 | 0.805651 | 1.204449e-49 | -8.615850e-47 |
| Msa0242410 | Msa0649020 | 0.800344 | 1.506024e-48 | -8.615850e-47 |
| Msa0258390 | Msa0649020 | 0.831708 | 1.432246e-55 | -8.615850e-47 |
| Msa0267370 | Msa0649020 | 0.806682 | 7.306456e-50 | -8.615850e-47 |
| Msa0279220 | Msa0649020 | 0.811858 | 5.673984e-51 | -8.615850e-47 |
| Msa0279240 | Msa0649020 | 0.850803 | 1.340825e-60 | -8.615850e-47 |
| Msa0295460 | Msa0649020 | -0.802722 | 4.903336e-49 | -8.615850e-47 |
| Msa0297610 | Msa0649020 | 0.818121 | 2.312051e-52 | -8.615850e-47 |
| Msa0299870 | Msa0649020 | 0.844819 | 5.968340e-59 | -8.615850e-47 |
| Msa0309750 | Msa0649020 | 0.837141 | 6.190649e-57 | -8.615850e-47 |
| Msa0309770 | Msa0649020 | 0.812254 | 4.650661e-51 | -8.615850e-47 |
| Msa0318980 | Msa0649020 | 0.845253 | 4.557524e-59 | -8.615850e-47 |
| Msa0326480 | Msa0649020 | 0.811699 | 6.144827e-51 | -8.615850e-47 |
| Msa0335730 | Msa0649020 | 0.845813 | 3.213298e-59 | -8.615850e-47 |
| Msa0337240 | Msa0649020 | 0.822975 | 1.776630e-53 | -8.615850e-47 |
| Msa0337620 | Msa0649020 | 0.804201 | 2.420548e-49 | -8.615850e-47 |
| Msa0340380 | Msa0649020 | 0.828938 | 6.804660e-55 | -8.615850e-47 |
| Msa0357900 | Msa0649020 | 0.842333 | 2.757646e-58 | -8.615850e-47 |
| Msa0493410 | Msa0649020 | 0.812887 | 3.381079e-51 | -8.615850e-47 |
| Msa0497210 | Msa0649020 | 0.834258 | 3.325018e-56 | -8.615850e-47 |
| Msa0497490 | Msa0649020 | 0.806618 | 7.537292e-50 | -8.615850e-47 |
| Msa0510930 | Msa0649020 | 0.818019 | 2.438903e-52 | -8.615850e-47 |
| Msa0523120 | Msa0649020 | 0.826601 | 2.480984e-54 | -8.615850e-47 |
| Msa0529890 | Msa0649020 | 0.846443 | 2.165831e-59 | -8.615850e-47 |
| Msa0532990 | Msa0649020 | 0.809954 | 1.465834e-50 | -8.615850e-47 |
| Msa0542090 | Msa0649020 | 0.823134 | 1.630986e-53 | -8.615850e-47 |
| Msa0542130 | Msa0649020 | 0.823276 | 1.511144e-53 | -8.615850e-47 |
| Msa0548240 | Msa0649020 | 0.808901 | 2.465903e-50 | -8.615850e-47 |
| Msa0554920 | Msa0649020 | 0.958358 | 2.868546e-116 | -8.615850e-47 |
| Msa0555450 | Msa0649020 | 0.810820 | 9.529814e-51 | -8.615850e-47 |
| Msa0556060 | Msa0649020 | 0.816695 | 4.843148e-52 | -8.615850e-47 |
| Msa0557070 | Msa0649020 | 0.803332 | 3.667174e-49 | -8.615850e-47 |
| Msa0569200 | Msa0649020 | 0.806592 | 7.631700e-50 | -8.615850e-47 |
| Msa0572840 | Msa0649020 | 0.825738 | 3.979228e-54 | -8.615850e-47 |
| Msa0581280 | Msa0649020 | 0.855812 | 4.908014e-62 | -8.615850e-47 |
| Msa0585510 | Msa0649020 | 0.804268 | 2.343508e-49 | -8.615850e-47 |
| Msa0585560 | Msa0649020 | 0.852295 | 5.071182e-61 | -8.615850e-47 |
| Msa0588360 | Msa0649020 | 0.817849 | 2.664398e-52 | -8.615850e-47 |
| Msa0602690 | Msa0649020 | 0.802603 | 5.186621e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0649020 | MtrunA17_Chr2g0332911 | 71.343 | 335 | 63 | 2 | 1 | 305 | 1 | 332 | 1.97e-156 | 440 |
| Msa0649020 | MtrunA17_Chr4g0040641 | 92.188 | 192 | 12 | 2 | 115 | 306 | 1 | 189 | 9.84e-103 | 298 |
| Msa0649020 | MtrunA17_Chr4g0040651 | 100.000 | 110 | 0 | 0 | 1 | 110 | 1 | 110 | 1.16e-83 | 247 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0649020 | AT1G23280.1 | 74.611 | 193 | 47 | 1 | 1 | 193 | 1 | 191 | 1.20e-105 | 310 |
Find 61 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAACGACTAATCAAAATT+TGG | 0.234048 | 4_3:+55618998 | None:intergenic |
| GAAGATGATATAGAAGATTT+TGG | 0.237046 | 4_3:-55621096 | Msa0649020:CDS |
| AAACGACGTTTGCTTCATTC+AGG | 0.288021 | 4_3:+55623262 | None:intergenic |
| GACTTTAGCTTCAAAGAAAC+TGG | 0.316024 | 4_3:-55619837 | Msa0649020:CDS |
| TATCCGCATCTGAGTCATTT+TGG | 0.319490 | 4_3:+55621819 | None:intergenic |
| CAAATTCCGGTGACATTGTA+AGG | 0.322485 | 4_3:+55623049 | None:intergenic |
| AGGTTATATGGCAAGTTATC+AGG | 0.341917 | 4_3:-55623126 | Msa0649020:CDS |
| TGAACTTCGGTTACAAATTC+CGG | 0.346804 | 4_3:+55623036 | None:intergenic |
| GTCTATTGAGAAAGAGCTAT+TGG | 0.348403 | 4_3:-55621407 | Msa0649020:CDS |
| TTAATCAAAGGAAAGCAAAA+AGG | 0.387263 | 4_3:-55619865 | Msa0649020:CDS |
| TGCAGCACGATGAGGTTATA+TGG | 0.401960 | 4_3:-55623138 | Msa0649020:CDS |
| ATCTTGTGTATAAGAAGCTT+GGG | 0.406860 | 4_3:+55621856 | None:intergenic |
| TACTGCACTGACAGATGTAT+TGG | 0.411812 | 4_3:-55621879 | Msa0649020:intron |
| ACTCTTTCCCACAAATCCTT+TGG | 0.416287 | 4_3:+55622044 | None:intergenic |
| AATGGCAGCGATGATGAAAA+TGG | 0.418107 | 4_3:-55621045 | Msa0649020:intron |
| AAAGGGAATGGTTTCGATGC+AGG | 0.431671 | 4_3:+55623215 | None:intergenic |
| TATCTTGTGTATAAGAAGCT+TGG | 0.432339 | 4_3:+55621855 | None:intergenic |
| TGCATATATCACCTCCTGTC+TGG | 0.447878 | 4_3:+55621362 | None:intergenic |
| ATTGAAGAGGAATCAGAAAC+AGG | 0.449047 | 4_3:-55621144 | Msa0649020:CDS |
| TGTTGAAGAAGAGGATGAAA+TGG | 0.458882 | 4_3:-55621284 | Msa0649020:intron |
| CTCATACGCCAAAGGATTTG+TGG | 0.458884 | 4_3:-55622052 | Msa0649020:CDS |
| AGCTTCAAAGAAACTGGAAA+AGG | 0.487427 | 4_3:-55619831 | Msa0649020:CDS |
| ATCTCAAGCTGTTGAAGAAG+AGG | 0.492311 | 4_3:-55621293 | Msa0649020:CDS |
| AACGACACTGCCAAGAAAAG+AGG | 0.508652 | 4_3:-55621569 | Msa0649020:CDS |
| GCACAACCATTGCAGTTACA+TGG | 0.509010 | 4_3:-55623104 | Msa0649020:CDS |
| TGAAGTCATTGACAAACATC+TGG | 0.510638 | 4_3:-55621991 | Msa0649020:intron |
| CATAGCGACTATTAGCTAAA+GGG | 0.510834 | 4_3:+55623011 | None:intergenic |
| AAAAGCAGCTGTGCTAGAAA+AGG | 0.513340 | 4_3:-55621512 | Msa0649020:intron |
| ATTCACGAGTCACAGGGAAA+TGG | 0.513739 | 4_3:-55621063 | Msa0649020:CDS |
| GCATAGCGACTATTAGCTAA+AGG | 0.516741 | 4_3:+55623010 | None:intergenic |
| CTCAGATGCGGATACGTATG+AGG | 0.518871 | 4_3:-55621810 | Msa0649020:CDS |
| AGAATATGTTGAATTTGAAG+AGG | 0.522267 | 4_3:-55621118 | Msa0649020:CDS |
| AAGGGAATGGTTTCGATGCA+GGG | 0.522545 | 4_3:+55623216 | None:intergenic |
| CAATGACTTCAAGTGCCTGC+TGG | 0.525481 | 4_3:+55622003 | None:intergenic |
| TCATACGCCAAAGGATTTGT+GGG | 0.528939 | 4_3:-55622051 | Msa0649020:CDS |
| AGTGCCTGCTGGTAATTCCT+AGG | 0.529178 | 4_3:+55622014 | None:intergenic |
| TTTCTTTGATTTAGAATCAG+AGG | 0.543640 | 4_3:+55619805 | None:intergenic |
| GGGAAAGAGTTAAGCTGCCT+AGG | 0.548712 | 4_3:-55622031 | Msa0649020:CDS |
| GGAAACTTTCTTTGAAAACA+AGG | 0.556860 | 4_3:-55621789 | Msa0649020:intron |
| TAGCTAAAGGGCATGAACTT+CGG | 0.561734 | 4_3:+55623023 | None:intergenic |
| ACCATTGTCTTCACGAATGG+TGG | 0.572329 | 4_3:+55622988 | None:intergenic |
| CAAAACGGACTTTACCAGAC+AGG | 0.572560 | 4_3:-55621376 | Msa0649020:CDS |
| GTTTGAAAGGAAGCCAGTGT+TGG | 0.577184 | 4_3:-55618891 | Msa0649020:three_prime_UTR |
| AAACTGAAGCACTTAATCAA+AGG | 0.580098 | 4_3:-55619877 | Msa0649020:CDS |
| AGTACCATTGTCTTCACGAA+TGG | 0.580983 | 4_3:+55622985 | None:intergenic |
| AAATTCCGGTGACATTGTAA+GGG | 0.585183 | 4_3:+55623050 | None:intergenic |
| CTATTGGTACGCCTTCAAAA+CGG | 0.597593 | 4_3:-55621391 | Msa0649020:CDS |
| AGAAACCCTTACAATGTCAC+CGG | 0.609253 | 4_3:-55623055 | Msa0649020:CDS |
| GAAAGCGAAGGTCCTCATTG+AGG | 0.612298 | 4_3:-55619786 | Msa0649020:intron |
| TTCTAAATCAAAGAAAGCGA+AGG | 0.616150 | 4_3:-55619798 | Msa0649020:CDS |
| AACACGACGATGCTGTCGAA+AGG | 0.621867 | 4_3:-55619090 | Msa0649020:CDS |
| TTTGCAATTCACGAGTCACA+GGG | 0.623320 | 4_3:-55621069 | Msa0649020:CDS |
| GCTGCCTAGGAATTACCAGC+AGG | 0.624895 | 4_3:-55622018 | Msa0649020:CDS |
| CACAAAGATGCAGCACGATG+AGG | 0.628152 | 4_3:-55623146 | Msa0649020:exon |
| TGAAAGAGCTCATACGCCAA+AGG | 0.633610 | 4_3:-55622060 | Msa0649020:CDS |
| AGTATAAAATTACCTCAATG+AGG | 0.639733 | 4_3:+55619774 | None:intergenic |
| TACATGGCCAAAATTACCAC+CGG | 0.640975 | 4_3:-55623088 | Msa0649020:CDS |
| GCCACCATTCGTGAAGACAA+TGG | 0.656349 | 4_3:-55622989 | Msa0649020:intron |
| TGCTGTCGAAAGGCAAAGAG+CGG | 0.666319 | 4_3:-55619080 | Msa0649020:CDS |
| AACGGACTTTACCAGACAGG+AGG | 0.681084 | 4_3:-55621373 | Msa0649020:CDS |
| TGACCAAAATGACTCAGATG+CGG | 0.687329 | 4_3:-55621822 | Msa0649020:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATGTCATTTTAATCAAAT+GGG | + | chr4_3:55619272-55619291 | None:intergenic | 15.0% |
| !!! | TAAATGTCATTTTAATCAAA+TGG | + | chr4_3:55619273-55619292 | None:intergenic | 15.0% |
| !! | ATTTGATTAAAATGACATTT+AGG | - | chr4_3:55619272-55619291 | Msa0649020:intron | 15.0% |
| !!! | AATAATAAGTTGATAGTTTA+TGG | - | chr4_3:55619944-55619963 | Msa0649020:intron | 15.0% |
| !! | ATACAAAAAAGTTATTGATA+TGG | - | chr4_3:55620774-55620793 | Msa0649020:intron | 15.0% |
| !!! | ATAATGGAAGATAATAAAAT+GGG | + | chr4_3:55622039-55622058 | None:intergenic | 15.0% |
| !!! | ATCTTTGTGATCAAATTTTA+AGG | + | chr4_3:55618940-55618959 | None:intergenic | 20.0% |
| !! | ATATAGTTATGAAATTCTTG+TGG | - | chr4_3:55619186-55619205 | Msa0649020:intron | 20.0% |
| !!! | TATTACATTTTCCATTCAAA+AGG | + | chr4_3:55619925-55619944 | None:intergenic | 20.0% |
| !! | TTATTGTTAAAAAGAAGCAA+AGG | + | chr4_3:55620350-55620369 | None:intergenic | 20.0% |
| !!! | TCCTTTATCTACTATATTTT+AGG | - | chr4_3:55620415-55620434 | Msa0649020:intron | 20.0% |
| !! | AAATTCTTAGTAACTTAACT+TGG | - | chr4_3:55620891-55620910 | Msa0649020:intron | 20.0% |
| !! | AAAGATAAAAGAAATATACC+AGG | + | chr4_3:55620929-55620948 | None:intergenic | 20.0% |
| !! | TGCTAAAATATATGTGAAAT+AGG | - | chr4_3:55621136-55621155 | Msa0649020:CDS | 20.0% |
| !! | AATATATGTGAAATAGGTTA+TGG | - | chr4_3:55621142-55621161 | Msa0649020:CDS | 20.0% |
| !! | AACTAAAATACAAAAGATTC+TGG | - | chr4_3:55621221-55621240 | Msa0649020:intron | 20.0% |
| !! | TAAAATAATCATCCATAGTA+TGG | + | chr4_3:55621581-55621600 | None:intergenic | 20.0% |
| !!! | TATTTTATCTTTTCCTTGTT+TGG | - | chr4_3:55621594-55621613 | Msa0649020:intron | 20.0% |
| !! | GTAAATAGATGAGTAAAAAA+TGG | + | chr4_3:55621803-55621822 | None:intergenic | 20.0% |
| !! | CTTGATAAATAAGAATCAAA+AGG | + | chr4_3:55621847-55621866 | None:intergenic | 20.0% |
| !!! | CTTTTGATTCTTATTTATCA+AGG | - | chr4_3:55621845-55621864 | Msa0649020:CDS | 20.0% |
| !!! | GTGAATTTTGTCTATTTTTT+GGG | + | chr4_3:55621975-55621994 | None:intergenic | 20.0% |
| !!! | AGTGAATTTTGTCTATTTTT+TGG | + | chr4_3:55621976-55621995 | None:intergenic | 20.0% |
| !!! | GATAATGGAAGATAATAAAA+TGG | + | chr4_3:55622040-55622059 | None:intergenic | 20.0% |
| !! | ATTAAAAAGCAATAACATGA+TGG | - | chr4_3:55622161-55622180 | Msa0649020:intron | 20.0% |
| !! | AACATTCTGTTATAATTTGA+AGG | - | chr4_3:55622490-55622509 | Msa0649020:intron | 20.0% |
| !!! | TTTAGAACTTACGAAATTTT+AGG | + | chr4_3:55622948-55622967 | None:intergenic | 20.0% |
| !!! | TTTTGATTTTCATTGTTTTC+AGG | - | chr4_3:55622981-55623000 | Msa0649020:intron | 20.0% |
| !!! | TTATTTTGCTTTTGTTTGAA+AGG | - | chr4_3:55623193-55623212 | Msa0649020:five_prime_UTR | 20.0% |
| !!! | AATATGAGTTTTGTTTTGTT+TGG | - | chr4_3:55623239-55623258 | Msa0649020:five_prime_UTR | 20.0% |
| ! | ACTTTGATATCTTAGACATT+TGG | - | chr4_3:55619310-55619329 | Msa0649020:intron | 25.0% |
| ! | CATGTCAATGATTATGATTA+AGG | - | chr4_3:55619376-55619395 | Msa0649020:intron | 25.0% |
| !!! | GCTGTTTTAATAAGTTATCT+TGG | - | chr4_3:55619544-55619563 | Msa0649020:intron | 25.0% |
| !! | GATGTTTTCATAAGTTATCT+TGG | - | chr4_3:55619585-55619604 | Msa0649020:intron | 25.0% |
| !! | TTTTCATAAGTTATCTTGGA+GGG | - | chr4_3:55619589-55619608 | Msa0649020:intron | 25.0% |
| ! | TGGGAGAACTTATAAAAAAA+GGG | + | chr4_3:55619823-55619842 | None:intergenic | 25.0% |
| ! | TTGGGAGAACTTATAAAAAA+AGG | + | chr4_3:55619824-55619843 | None:intergenic | 25.0% |
| !! | TTTCAATAGTTTTCATGTAG+AGG | + | chr4_3:55620022-55620041 | None:intergenic | 25.0% |
| ! | GCCTAAAATATAGTAGATAA+AGG | + | chr4_3:55620419-55620438 | None:intergenic | 25.0% |
| ! | ATAACATAATTTAGTACGCA+CGG | + | chr4_3:55620633-55620652 | None:intergenic | 25.0% |
| ! | AATATTCAAAAGAAACAGTG+AGG | + | chr4_3:55620665-55620684 | None:intergenic | 25.0% |
| ! | CAAAAAAGTTATTGATATGG+TGG | - | chr4_3:55620777-55620796 | Msa0649020:intron | 25.0% |
| !! | TTTATCTTTTCAGATTGAAG+AGG | - | chr4_3:55620940-55620959 | Msa0649020:intron | 25.0% |
| ! | AGAATATGTTGAATTTGAAG+AGG | - | chr4_3:55620979-55620998 | Msa0649020:intron | 25.0% |
| !! | GAAGATGATATAGAAGATTT+TGG | - | chr4_3:55621001-55621020 | Msa0649020:intron | 25.0% |
| ! | AAATATTTCTTCACTCATCA+AGG | - | chr4_3:55621177-55621196 | Msa0649020:intron | 25.0% |
| ! | GAAAATAGTTATCCATACTA+TGG | - | chr4_3:55621566-55621585 | Msa0649020:CDS | 25.0% |
| !!! | AATCTTCTTTTTTGCTTGTT+CGG | + | chr4_3:55621929-55621948 | None:intergenic | 25.0% |
| !! | ATTTTCCAAAATCACTAACA+AGG | + | chr4_3:55622124-55622143 | None:intergenic | 25.0% |
| ! | TTAATCAAAGGAAAGCAAAA+AGG | - | chr4_3:55622232-55622251 | Msa0649020:intron | 25.0% |
| !! | TTTCTTTGATTTAGAATCAG+AGG | + | chr4_3:55622295-55622314 | None:intergenic | 25.0% |
| ! | AGTATAAAATTACCTCAATG+AGG | + | chr4_3:55622326-55622345 | None:intergenic | 25.0% |
| ! | CACAATAGCATTTAAAAGAA+CGG | + | chr4_3:55622369-55622388 | None:intergenic | 25.0% |
| !! | TATTACAACAAAAGTGTGTT+TGG | + | chr4_3:55622732-55622751 | None:intergenic | 25.0% |
| !!! | ACACTTTTGTTGTAATATTG+CGG | - | chr4_3:55622735-55622754 | Msa0649020:intron | 25.0% |
| ! | AAAATCAAAATTGTGATGTC+AGG | + | chr4_3:55622971-55622990 | None:intergenic | 25.0% |
| !! | ATTTTGTGTTAGTTACTGAT+AGG | - | chr4_3:55623052-55623071 | Msa0649020:CDS | 25.0% |
| ! | AGAAACGACTAATCAAAATT+TGG | + | chr4_3:55623102-55623121 | None:intergenic | 25.0% |
| !! | ATTTTTATATTTGCCAACAC+TGG | + | chr4_3:55623222-55623241 | None:intergenic | 25.0% |
| !!! | TTGAGGTTTTAGGGTTTAAA+GGG | + | chr4_3:55618902-55618921 | None:intergenic | 30.0% |
| !!! | TTTGAGGTTTTAGGGTTTAA+AGG | + | chr4_3:55618903-55618922 | None:intergenic | 30.0% |
| !!! | CTTTCAGTTTTGAGGTTTTA+GGG | + | chr4_3:55618911-55618930 | None:intergenic | 30.0% |
| !!! | ACTTTCAGTTTTGAGGTTTT+AGG | + | chr4_3:55618912-55618931 | None:intergenic | 30.0% |
| ! | GGATTTTACTTTCAGTTTTG+AGG | + | chr4_3:55618919-55618938 | None:intergenic | 30.0% |
| ! | AAAAATACCGGTGGTAATTT+TGG | + | chr4_3:55619019-55619038 | None:intergenic | 30.0% |
| AGGGTTTCTACAAAAAATAC+CGG | + | chr4_3:55619031-55619050 | None:intergenic | 30.0% | |
| ATTATGATTAAGGCTCTGTT+TGG | - | chr4_3:55619386-55619405 | Msa0649020:intron | 30.0% | |
| ATTGCAGCTTATATATCATG+AGG | - | chr4_3:55619443-55619462 | Msa0649020:intron | 30.0% | |
| AAGTTATCTTGGAGAGTTTA+TGG | - | chr4_3:55619555-55619574 | Msa0649020:intron | 30.0% | |
| ! | GTTTTCATAAGTTATCTTGG+AGG | - | chr4_3:55619588-55619607 | Msa0649020:intron | 30.0% |
| TACAATACACCCAAAATTGT+GGG | - | chr4_3:55619748-55619767 | Msa0649020:intron | 30.0% | |
| GGGAGAACTTATAAAAAAAG+GGG | + | chr4_3:55619822-55619841 | None:intergenic | 30.0% | |
| ! | TTGTATCGTATCCTTTTGAA+TGG | - | chr4_3:55619911-55619930 | Msa0649020:intron | 30.0% |
| ATCTTGTGTATAAGAAGCTT+GGG | + | chr4_3:55620244-55620263 | None:intergenic | 30.0% | |
| TATCTTGTGTATAAGAAGCT+TGG | + | chr4_3:55620245-55620264 | None:intergenic | 30.0% | |
| ! | GGAAACTTTCTTTGAAAACA+AGG | - | chr4_3:55620308-55620327 | Msa0649020:intron | 30.0% |
| !!! | TTGGTTGTTGTTGTTTTACA+GGG | - | chr4_3:55620498-55620517 | Msa0649020:intron | 30.0% |
| TAACATAATTTAGTACGCAC+GGG | + | chr4_3:55620632-55620651 | None:intergenic | 30.0% | |
| CTTTGAGCTGTAGTAAATAT+TGG | - | chr4_3:55621322-55621341 | Msa0649020:CDS | 30.0% | |
| ACAATGCAAATGATAGCAAA+TGG | - | chr4_3:55621540-55621559 | Msa0649020:CDS | 30.0% | |
| CAATGCAAATGATAGCAAAT+GGG | - | chr4_3:55621541-55621560 | Msa0649020:CDS | 30.0% | |
| !! | TTATCTTTTCCTTGTTTGGT+TGG | - | chr4_3:55621598-55621617 | Msa0649020:intron | 30.0% |
| !!! | TTTTTTTTCTCATGTCGTGA+TGG | - | chr4_3:55621672-55621691 | Msa0649020:intron | 30.0% |
| ATAAAATGGGCAGAAAGTAA+AGG | + | chr4_3:55622026-55622045 | None:intergenic | 30.0% | |
| CATTTGGATGCAAAAGATAA+TGG | + | chr4_3:55622055-55622074 | None:intergenic | 30.0% | |
| AGTGTTCTTCTCAAATGATA+AGG | + | chr4_3:55622099-55622118 | None:intergenic | 30.0% | |
| ! | AAACTGAAGCACTTAATCAA+AGG | - | chr4_3:55622220-55622239 | Msa0649020:intron | 30.0% |
| TTCTAAATCAAAGAAAGCGA+AGG | - | chr4_3:55622299-55622318 | Msa0649020:intron | 30.0% | |
| GTGTGTTTGGCATAATTATT+TGG | + | chr4_3:55622719-55622738 | None:intergenic | 30.0% | |
| !! | TGATTTTCATTGTTTTCAGG+TGG | - | chr4_3:55622984-55623003 | Msa0649020:intron | 30.0% |
| !!! | CTTCAAATTAGTTTTTACCC+TGG | - | chr4_3:55623120-55623139 | Msa0649020:CDS | 30.0% |
| !!! | GTTTTAGGGTTTAAAGGGAA+TGG | + | chr4_3:55618897-55618916 | None:intergenic | 35.0% |
| AGGTTATATGGCAAGTTATC+AGG | - | chr4_3:55618971-55618990 | Msa0649020:three_prime_UTR | 35.0% | |
| GTTTCTACAAAAAATACCGG+TGG | + | chr4_3:55619028-55619047 | None:intergenic | 35.0% | |
| AAATTCCGGTGACATTGTAA+GGG | + | chr4_3:55619050-55619069 | None:intergenic | 35.0% | |
| TGAACTTCGGTTACAAATTC+CGG | + | chr4_3:55619064-55619083 | None:intergenic | 35.0% | |
| CATAGCGACTATTAGCTAAA+GGG | + | chr4_3:55619089-55619108 | None:intergenic | 35.0% | |
| TATGAAATTCTTGTGGAGTG+TGG | - | chr4_3:55619193-55619212 | Msa0649020:intron | 35.0% | |
| GTGGAGAAAACTGCATTATT+TGG | - | chr4_3:55619212-55619231 | Msa0649020:intron | 35.0% | |
| !! | TAGACATTTGGTTCTTCATG+TGG | - | chr4_3:55619322-55619341 | Msa0649020:intron | 35.0% |
| !! | AGACATTTGGTTCTTCATGT+GGG | - | chr4_3:55619323-55619342 | Msa0649020:intron | 35.0% |
| ATGTGGGGTAGGTAATAATT+TGG | - | chr4_3:55619339-55619358 | Msa0649020:intron | 35.0% | |
| !!! | CTTACCCTGTTTTTTTACAC+AGG | + | chr4_3:55619722-55619741 | None:intergenic | 35.0% |
| GTACAATACACCCAAAATTG+TGG | - | chr4_3:55619747-55619766 | Msa0649020:intron | 35.0% | |
| ! | GATTATTTGAGTTTGTCTGC+TGG | + | chr4_3:55619868-55619887 | None:intergenic | 35.0% |
| ! | CATTTAGGGTCTGTTTAGAT+AGG | + | chr4_3:55619890-55619909 | None:intergenic | 35.0% |
| CTATCTAAACAGACCCTAAA+TGG | - | chr4_3:55619888-55619907 | Msa0649020:CDS | 35.0% | |
| GGATACGATACAACCATTTA+GGG | + | chr4_3:55619904-55619923 | None:intergenic | 35.0% | |
| AGGATACGATACAACCATTT+AGG | + | chr4_3:55619905-55619924 | None:intergenic | 35.0% | |
| ACAATTGCATTGTGTGATGT+AGG | - | chr4_3:55619987-55620006 | Msa0649020:intron | 35.0% | |
| TGAAGTCATTGACAAACATC+TGG | - | chr4_3:55620106-55620125 | Msa0649020:intron | 35.0% | |
| ! | CTTTTATGGAGAAACTGCTA+TGG | + | chr4_3:55620461-55620480 | None:intergenic | 35.0% |
| TAGCAGTTTCTCCATAAAAG+TGG | - | chr4_3:55620461-55620480 | Msa0649020:intron | 35.0% | |
| AACAACCAACATGATCAATC+AGG | + | chr4_3:55620487-55620506 | None:intergenic | 35.0% | |
| !!! | GTTGGTTGTTGTTGTTTTAC+AGG | - | chr4_3:55620497-55620516 | Msa0649020:intron | 35.0% |
| ! | TCTCTCTTAACCTCTTTTCT+TGG | + | chr4_3:55620541-55620560 | None:intergenic | 35.0% |
| GTCTATTGAGAAAGAGCTAT+TGG | - | chr4_3:55620690-55620709 | Msa0649020:intron | 35.0% | |
| TGTTGAAGAAGAGGATGAAA+TGG | - | chr4_3:55620813-55620832 | Msa0649020:intron | 35.0% | |
| ATTGAAGAGGAATCAGAAAC+AGG | - | chr4_3:55620953-55620972 | Msa0649020:intron | 35.0% | |
| TAGAAGCTTTGCAATATGCA+TGG | - | chr4_3:55621087-55621106 | Msa0649020:CDS | 35.0% | |
| ! | GATTCTGGATTAGATATGCA+TGG | - | chr4_3:55621236-55621255 | Msa0649020:intron | 35.0% |
| !! | TTTTCCTTGTTTGGTTGGTT+GGG | - | chr4_3:55621603-55621622 | Msa0649020:intron | 35.0% |
| ! | AGGGAAATTTTGCTAATCAG+AGG | - | chr4_3:55621640-55621659 | Msa0649020:intron | 35.0% |
| ATAAGAATCAAAAGGATCCC+AGG | + | chr4_3:55621839-55621858 | None:intergenic | 35.0% | |
| !!! | TTCTTTTTTGCTTGTTCGGT+TGG | + | chr4_3:55621925-55621944 | None:intergenic | 35.0% |
| ! | ACTCTCCTTGTTAGTGATTT+TGG | - | chr4_3:55622116-55622135 | Msa0649020:intron | 35.0% |
| ATGGCATTTACTAATGCAGA+TGG | - | chr4_3:55622180-55622199 | Msa0649020:intron | 35.0% | |
| ! | GACTTTAGCTTCAAAGAAAC+TGG | - | chr4_3:55622260-55622279 | Msa0649020:intron | 35.0% |
| AGCTTCAAAGAAACTGGAAA+AGG | - | chr4_3:55622266-55622285 | Msa0649020:intron | 35.0% | |
| ! | AACAACTCAACCACTTCTTT+TGG | - | chr4_3:55622428-55622447 | Msa0649020:intron | 35.0% |
| ! | ACAACTCAACCACTTCTTTT+GGG | - | chr4_3:55622429-55622448 | Msa0649020:intron | 35.0% |
| !! | ACCACTTCTTTTGGGAATTT+TGG | - | chr4_3:55622437-55622456 | Msa0649020:intron | 35.0% |
| ACCAAAATTCCCAAAAGAAG+TGG | + | chr4_3:55622441-55622460 | None:intergenic | 35.0% | |
| TAAATGATGCTGCTACAAAC+TGG | - | chr4_3:55622533-55622552 | Msa0649020:intron | 35.0% | |
| TCTCGTGTTCGAAACAATTA+AGG | - | chr4_3:55622765-55622784 | Msa0649020:intron | 35.0% | |
| CTCGTGTTCGAAACAATTAA+GGG | - | chr4_3:55622766-55622785 | Msa0649020:intron | 35.0% | |
| ! | ATCAGATCTCTTTTGTTCCA+GGG | + | chr4_3:55623140-55623159 | None:intergenic | 35.0% |
| ! | AATCAGATCTCTTTTGTTCC+AGG | + | chr4_3:55623141-55623160 | None:intergenic | 35.0% |
| !! | GGTTTTGTATTACGTTCTTC+AGG | - | chr4_3:55623260-55623279 | Msa0649020:five_prime_UTR | 35.0% |
| ! | TTTTGGCCATGTAACTGCAA+TGG | + | chr4_3:55619002-55619021 | None:intergenic | 40.0% |
| TACATGGCCAAAATTACCAC+CGG | - | chr4_3:55619009-55619028 | Msa0649020:three_prime_UTR | 40.0% | |
| AGAAACCCTTACAATGTCAC+CGG | - | chr4_3:55619042-55619061 | Msa0649020:three_prime_UTR | 40.0% | |
| CAAATTCCGGTGACATTGTA+AGG | + | chr4_3:55619051-55619070 | None:intergenic | 40.0% | |
| ! | TAGCTAAAGGGCATGAACTT+CGG | + | chr4_3:55619077-55619096 | None:intergenic | 40.0% |
| GCATAGCGACTATTAGCTAA+AGG | + | chr4_3:55619090-55619109 | None:intergenic | 40.0% | |
| AGTACCATTGTCTTCACGAA+TGG | + | chr4_3:55619115-55619134 | None:intergenic | 40.0% | |
| !! | GACATTTGGTTCTTCATGTG+GGG | - | chr4_3:55619324-55619343 | Msa0649020:intron | 40.0% |
| AAGTTATCTTGGAGGGCTTA+TGG | - | chr4_3:55619596-55619615 | Msa0649020:intron | 40.0% | |
| ! | TGTAAATTTTCCCAACGCCT+TGG | - | chr4_3:55619633-55619652 | Msa0649020:intron | 40.0% |
| GTTGTTGTCACATCACTGAA+AGG | - | chr4_3:55619668-55619687 | Msa0649020:intron | 40.0% | |
| AGCCTCCTGTGTAAAAAAAC+AGG | - | chr4_3:55619714-55619733 | Msa0649020:intron | 40.0% | |
| GCCTCCTGTGTAAAAAAACA+GGG | - | chr4_3:55619715-55619734 | Msa0649020:intron | 40.0% | |
| !!! | ACCCTGTTTTTTTACACAGG+AGG | + | chr4_3:55619719-55619738 | None:intergenic | 40.0% |
| TTATAAAAAAAGGGGCAGCC+CGG | + | chr4_3:55619814-55619833 | None:intergenic | 40.0% | |
| TCATACGCCAAAGGATTTGT+GGG | - | chr4_3:55620046-55620065 | Msa0649020:intron | 40.0% | |
| ACTCTTTCCCACAAATCCTT+TGG | + | chr4_3:55620056-55620075 | None:intergenic | 40.0% | |
| TACATCTGTCAGTGCAGTAA+AGG | + | chr4_3:55620217-55620236 | None:intergenic | 40.0% | |
| ! | TACTGCACTGACAGATGTAT+TGG | - | chr4_3:55620218-55620237 | Msa0649020:intron | 40.0% |
| TGACCAAAATGACTCAGATG+CGG | - | chr4_3:55620275-55620294 | Msa0649020:intron | 40.0% | |
| ! | TATCCGCATCTGAGTCATTT+TGG | + | chr4_3:55620281-55620300 | None:intergenic | 40.0% |
| !!! | GATCAATCAGGCCACTTTTA+TGG | + | chr4_3:55620475-55620494 | None:intergenic | 40.0% |
| AAAAGCAGCTGTGCTAGAAA+AGG | - | chr4_3:55620585-55620604 | Msa0649020:intron | 40.0% | |
| CTATTGGTACGCCTTCAAAA+CGG | - | chr4_3:55620706-55620725 | Msa0649020:intron | 40.0% | |
| ! | TCTGGTAAAGTCCGTTTTGA+AGG | + | chr4_3:55620720-55620739 | None:intergenic | 40.0% |
| ATCTCAAGCTGTTGAAGAAG+AGG | - | chr4_3:55620804-55620823 | Msa0649020:intron | 40.0% | |
| ! | ACTTGGTAATATGTTGAGCC+TGG | - | chr4_3:55620908-55620927 | Msa0649020:intron | 40.0% |
| ! | TTTTGCAATTCACGAGTCAC+AGG | - | chr4_3:55621027-55621046 | Msa0649020:intron | 40.0% |
| TTTGCAATTCACGAGTCACA+GGG | - | chr4_3:55621028-55621047 | Msa0649020:intron | 40.0% | |
| AATGGCAGCGATGATGAAAA+TGG | - | chr4_3:55621052-55621071 | Msa0649020:CDS | 40.0% | |
| GATATGACTGCAGTATCTAG+AGG | + | chr4_3:55621406-55621425 | None:intergenic | 40.0% | |
| !! | CTTTTCCTTGTTTGGTTGGT+TGG | - | chr4_3:55621602-55621621 | Msa0649020:intron | 40.0% |
| ! | TTGGTTGGTTGGGTAGAAAA+CGG | - | chr4_3:55621613-55621632 | Msa0649020:intron | 40.0% |
| ! | TTTTTCTCATGTCGTGATGG+AGG | - | chr4_3:55621675-55621694 | Msa0649020:intron | 40.0% |
| !! | TTTTCTCATGTCGTGATGGA+GGG | - | chr4_3:55621676-55621695 | Msa0649020:intron | 40.0% |
| ATGGAGGGACGAAATATCAA+GGG | - | chr4_3:55621691-55621710 | Msa0649020:intron | 40.0% | |
| AGTTGTCTCTTCACTTGAGA+GGG | + | chr4_3:55621750-55621769 | None:intergenic | 40.0% | |
| TAGTTGTCTCTTCACTTGAG+AGG | + | chr4_3:55621751-55621770 | None:intergenic | 40.0% | |
| CATCCAAATGAGACATATGC+TGG | - | chr4_3:55622065-55622084 | Msa0649020:CDS | 40.0% | |
| GTGACTGCTTGAGTTCTATA+TGG | - | chr4_3:55622843-55622862 | Msa0649020:intron | 40.0% | |
| AAGGGAATGGTTTCGATGCA+GGG | + | chr4_3:55618884-55618903 | None:intergenic | 45.0% | |
| AAAGGGAATGGTTTCGATGC+AGG | + | chr4_3:55618885-55618904 | None:intergenic | 45.0% | |
| TGCAGCACGATGAGGTTATA+TGG | - | chr4_3:55618959-55618978 | Msa0649020:three_prime_UTR | 45.0% | |
| GCACAACCATTGCAGTTACA+TGG | - | chr4_3:55618993-55619012 | Msa0649020:three_prime_UTR | 45.0% | |
| ACCATTGTCTTCACGAATGG+TGG | + | chr4_3:55619112-55619131 | None:intergenic | 45.0% | |
| !! | TTTGGTTCTTCATGTGGGGT+AGG | - | chr4_3:55619328-55619347 | Msa0649020:intron | 45.0% |
| AAGGTCACACGTTCAAGTCT+TGG | - | chr4_3:55619687-55619706 | Msa0649020:intron | 45.0% | |
| ! | AGAAGGGGTCCCACAATTTT+GGG | + | chr4_3:55619760-55619779 | None:intergenic | 45.0% |
| AAAATTGTGGGACCCCTTCT+CGG | - | chr4_3:55619760-55619779 | Msa0649020:intron | 45.0% | |
| ACGCAGGAAATTTAGTGCAC+CGG | - | chr4_3:55619792-55619811 | Msa0649020:CDS | 45.0% | |
| !! | AAGCACTTCTGAGACAGGTT+GGG | + | chr4_3:55619842-55619861 | None:intergenic | 45.0% |
| !! | TAAGCACTTCTGAGACAGGT+TGG | + | chr4_3:55619843-55619862 | None:intergenic | 45.0% |
| TGAAAGAGCTCATACGCCAA+AGG | - | chr4_3:55620037-55620056 | Msa0649020:intron | 45.0% | |
| CTCATACGCCAAAGGATTTG+TGG | - | chr4_3:55620045-55620064 | Msa0649020:intron | 45.0% | |
| AGTGGCCTGATTGATCATGT+TGG | - | chr4_3:55620479-55620498 | Msa0649020:intron | 45.0% | |
| AACGACACTGCCAAGAAAAG+AGG | - | chr4_3:55620528-55620547 | Msa0649020:intron | 45.0% | |
| TAGTACGCACGGGTAACATT+CGG | + | chr4_3:55620622-55620641 | None:intergenic | 45.0% | |
| ! | CAAAACGGACTTTACCAGAC+AGG | - | chr4_3:55620721-55620740 | Msa0649020:intron | 45.0% |
| TGCATATATCACCTCCTGTC+TGG | + | chr4_3:55620738-55620757 | None:intergenic | 45.0% | |
| ATTCACGAGTCACAGGGAAA+TGG | - | chr4_3:55621034-55621053 | Msa0649020:intron | 45.0% | |
| TCTACCCAACCAACCAAACA+AGG | + | chr4_3:55621610-55621629 | None:intergenic | 45.0% | |
| ! | TGGTTGGTTGGGTAGAAAAC+GGG | - | chr4_3:55621614-55621633 | Msa0649020:intron | 45.0% |
| TTGGGTAGAAAACGGGAGAA+GGG | - | chr4_3:55621621-55621640 | Msa0649020:intron | 45.0% | |
| GATGGAGGGACGAAATATCA+AGG | - | chr4_3:55621690-55621709 | Msa0649020:intron | 45.0% | |
| TGGAGGGACGAAATATCAAG+GGG | - | chr4_3:55621692-55621711 | Msa0649020:intron | 45.0% | |
| CAAGGGGGAGAAATAATGTG+AGG | - | chr4_3:55621708-55621727 | Msa0649020:intron | 45.0% | |
| CCTCCAGCATATGTCTCATT+TGG | + | chr4_3:55622071-55622090 | None:intergenic | 45.0% | |
| CCAAATGAGACATATGCTGG+AGG | - | chr4_3:55622068-55622087 | Msa0649020:CDS | 45.0% | |
| AATGAGACATATGCTGGAGG+CGG | - | chr4_3:55622071-55622090 | Msa0649020:CDS | 45.0% | |
| AGAACGGATCGCTTTATACG+AGG | + | chr4_3:55622353-55622372 | None:intergenic | 45.0% | |
| AGGTCAGCATGCAAAAATGG+AGG | + | chr4_3:55622645-55622664 | None:intergenic | 45.0% | |
| GTGAGGTCAGCATGCAAAAA+TGG | + | chr4_3:55622648-55622667 | None:intergenic | 45.0% | |
| !! | AAGTCGTAGGTAGCTTTGTG+AGG | + | chr4_3:55622665-55622684 | None:intergenic | 45.0% |
| GCAAGACAAAGAGAAGTCGT+AGG | + | chr4_3:55622678-55622697 | None:intergenic | 45.0% | |
| CGACTTCTCTTTGTCTTGCT+TGG | - | chr4_3:55622679-55622698 | Msa0649020:intron | 45.0% | |
| GTTTGAAAGGAAGCCAGTGT+TGG | - | chr4_3:55623206-55623225 | Msa0649020:five_prime_UTR | 45.0% | |
| CACAAAGATGCAGCACGATG+AGG | - | chr4_3:55618951-55618970 | Msa0649020:three_prime_UTR | 50.0% | |
| GCCACCATTCGTGAAGACAA+TGG | - | chr4_3:55619108-55619127 | Msa0649020:intron | 50.0% | |
| ACAACTTTCCCGTTACGCCA+AGG | + | chr4_3:55619653-55619672 | None:intergenic | 50.0% | |
| ! | GAGAAGGGGTCCCACAATTT+TGG | + | chr4_3:55619761-55619780 | None:intergenic | 50.0% |
| AAATTGTGGGACCCCTTCTC+GGG | - | chr4_3:55619761-55619780 | Msa0649020:intron | 50.0% | |
| CGCAGGAAATTTAGTGCACC+GGG | - | chr4_3:55619793-55619812 | Msa0649020:CDS | 50.0% | |
| !! | GGCATAAGCACTTCTGAGAC+AGG | + | chr4_3:55619847-55619866 | None:intergenic | 50.0% |
| GGGAAAGAGTTAAGCTGCCT+AGG | - | chr4_3:55620066-55620085 | Msa0649020:intron | 50.0% | |
| AGTGCCTGCTGGTAATTCCT+AGG | + | chr4_3:55620086-55620105 | None:intergenic | 50.0% | |
| CAATGACTTCAAGTGCCTGC+TGG | + | chr4_3:55620097-55620116 | None:intergenic | 50.0% | |
| CTGTCAGTGCAGTAAAGGTC+AGG | + | chr4_3:55620212-55620231 | None:intergenic | 50.0% | |
| CTCAGATGCGGATACGTATG+AGG | - | chr4_3:55620287-55620306 | Msa0649020:intron | 50.0% | |
| ! | AACGGACTTTACCAGACAGG+AGG | - | chr4_3:55620724-55620743 | Msa0649020:intron | 50.0% |
| GTTGGGTAGAAAACGGGAGA+AGG | - | chr4_3:55621620-55621639 | Msa0649020:intron | 50.0% | |
| GGAGGGACGAAATATCAAGG+GGG | - | chr4_3:55621693-55621712 | Msa0649020:intron | 50.0% | |
| TTTACCTCGCTCATCTAGCC+TGG | - | chr4_3:55621818-55621837 | Msa0649020:CDS | 50.0% | |
| TTACCTCGCTCATCTAGCCT+GGG | - | chr4_3:55621819-55621838 | Msa0649020:CDS | 50.0% | |
| ATGAGACATATGCTGGAGGC+GGG | - | chr4_3:55622072-55622091 | Msa0649020:CDS | 50.0% | |
| GAAAGCGAAGGTCCTCATTG+AGG | - | chr4_3:55622311-55622330 | Msa0649020:intron | 50.0% | |
| AACACGACGATGCTGTCGAA+AGG | - | chr4_3:55623007-55623026 | Msa0649020:CDS | 50.0% | |
| TGCTGTCGAAAGGCAAAGAG+CGG | - | chr4_3:55623017-55623036 | Msa0649020:CDS | 50.0% | |
| TTCCCAACGCCTTGGCGTAA+CGG | - | chr4_3:55619641-55619660 | Msa0649020:intron | 55.0% | |
| GCTGCCTAGGAATTACCAGC+AGG | - | chr4_3:55620079-55620098 | Msa0649020:intron | 55.0% | |
| TCCCAACGCCTTGGCGTAAC+GGG | - | chr4_3:55619642-55619661 | Msa0649020:intron | 60.0% | |
| ! | TCCCGTTACGCCAAGGCGTT+GGG | + | chr4_3:55619646-55619665 | None:intergenic | 60.0% |
| TTCCCGTTACGCCAAGGCGT+TGG | + | chr4_3:55619647-55619666 | None:intergenic | 60.0% | |
| GATCCCAGGCTAGATGAGCG+AGG | + | chr4_3:55621825-55621844 | None:intergenic | 60.0% | |
| CGTGTGCAGAGCCCGAGAAG+GGG | + | chr4_3:55619775-55619794 | None:intergenic | 65.0% | |
| GCGTGTGCAGAGCCCGAGAA+GGG | + | chr4_3:55619776-55619795 | None:intergenic | 65.0% | |
| TGCGTGTGCAGAGCCCGAGA+AGG | + | chr4_3:55619777-55619796 | None:intergenic | 65.0% | |
| TTCTCGGGCTCTGCACACGC+AGG | - | chr4_3:55619776-55619795 | Msa0649020:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 55618836 | 55623283 | 55618836 | ID=Msa0649020;Name=Msa0649020 |
| chr4_3 | mRNA | 55618836 | 55623283 | 55618836 | ID=Msa0649020-mRNA-1;Parent=Msa0649020;Name=Msa0649020-mRNA-1;_AED=0.05;_eAED=0.05;_QI=122|1|1|1|1|1|8|236|306 |
| chr4_3 | exon | 55618836 | 55619116 | 55618836 | ID=Msa0649020-mRNA-1:exon:14303;Parent=Msa0649020-mRNA-1 |
| chr4_3 | exon | 55619787 | 55619920 | 55619787 | ID=Msa0649020-mRNA-1:exon:14302;Parent=Msa0649020-mRNA-1 |
| chr4_3 | exon | 55621046 | 55621166 | 55621046 | ID=Msa0649020-mRNA-1:exon:14301;Parent=Msa0649020-mRNA-1 |
| chr4_3 | exon | 55621285 | 55621428 | 55621285 | ID=Msa0649020-mRNA-1:exon:14300;Parent=Msa0649020-mRNA-1 |
| chr4_3 | exon | 55621513 | 55621600 | 55621513 | ID=Msa0649020-mRNA-1:exon:14299;Parent=Msa0649020-mRNA-1 |
| chr4_3 | exon | 55621790 | 55621887 | 55621790 | ID=Msa0649020-mRNA-1:exon:14298;Parent=Msa0649020-mRNA-1 |
| chr4_3 | exon | 55621992 | 55622110 | 55621992 | ID=Msa0649020-mRNA-1:exon:14297;Parent=Msa0649020-mRNA-1 |
| chr4_3 | exon | 55622990 | 55623283 | 55622990 | ID=Msa0649020-mRNA-1:exon:14296;Parent=Msa0649020-mRNA-1 |
| chr4_3 | five_prime_UTR | 55623162 | 55623283 | 55623162 | ID=Msa0649020-mRNA-1:five_prime_utr;Parent=Msa0649020-mRNA-1 |
| chr4_3 | CDS | 55622990 | 55623161 | 55622990 | ID=Msa0649020-mRNA-1:cds;Parent=Msa0649020-mRNA-1 |
| chr4_3 | CDS | 55621992 | 55622110 | 55621992 | ID=Msa0649020-mRNA-1:cds;Parent=Msa0649020-mRNA-1 |
| chr4_3 | CDS | 55621790 | 55621887 | 55621790 | ID=Msa0649020-mRNA-1:cds;Parent=Msa0649020-mRNA-1 |
| chr4_3 | CDS | 55621513 | 55621600 | 55621513 | ID=Msa0649020-mRNA-1:cds;Parent=Msa0649020-mRNA-1 |
| chr4_3 | CDS | 55621285 | 55621428 | 55621285 | ID=Msa0649020-mRNA-1:cds;Parent=Msa0649020-mRNA-1 |
| chr4_3 | CDS | 55621046 | 55621166 | 55621046 | ID=Msa0649020-mRNA-1:cds;Parent=Msa0649020-mRNA-1 |
| chr4_3 | CDS | 55619787 | 55619920 | 55619787 | ID=Msa0649020-mRNA-1:cds;Parent=Msa0649020-mRNA-1 |
| chr4_3 | CDS | 55619072 | 55619116 | 55619072 | ID=Msa0649020-mRNA-1:cds;Parent=Msa0649020-mRNA-1 |
| chr4_3 | three_prime_UTR | 55618836 | 55619071 | 55618836 | ID=Msa0649020-mRNA-1:three_prime_utr;Parent=Msa0649020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
