Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1323290 | XP_013444919.1 | 95.699 | 186 | 7 | 1 | 1 | 186 | 1 | 185 | 5.23e-124 | 357 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1323290 | A0A072TN82 | 95.699 | 186 | 7 | 1 | 1 | 186 | 1 | 185 | 2.50e-124 | 357 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015090 | Msa1323290 | 0.802551 | 5.316209e-49 | -8.615850e-47 |
| Msa0017320 | Msa1323290 | 0.805798 | 1.121958e-49 | -8.615850e-47 |
| Msa0037880 | Msa1323290 | 0.820231 | 7.652196e-53 | -8.615850e-47 |
| Msa0042550 | Msa1323290 | 0.808609 | 2.847725e-50 | -8.615850e-47 |
| Msa0043980 | Msa1323290 | 0.811737 | 6.026951e-51 | -8.615850e-47 |
| Msa0049750 | Msa1323290 | 0.806606 | 7.581403e-50 | -8.615850e-47 |
| Msa0058310 | Msa1323290 | 0.804452 | 2.145377e-49 | -8.615850e-47 |
| Msa0100090 | Msa1323290 | 0.804582 | 2.015845e-49 | -8.615850e-47 |
| Msa0109590 | Msa1323290 | 0.808517 | 2.979003e-50 | -8.615850e-47 |
| Msa0610130 | Msa1323290 | 0.815585 | 8.574774e-52 | -8.615850e-47 |
| Msa0610180 | Msa1323290 | 0.818044 | 2.407100e-52 | -8.615850e-47 |
| Msa0615340 | Msa1323290 | 0.810385 | 1.183290e-50 | -8.615850e-47 |
| Msa0626990 | Msa1323290 | 0.835488 | 1.629617e-56 | -8.615850e-47 |
| Msa0627350 | Msa1323290 | 0.835311 | 1.806385e-56 | -8.615850e-47 |
| Msa0667740 | Msa1323290 | 0.805613 | 1.226446e-49 | -8.615850e-47 |
| Msa0679550 | Msa1323290 | 0.838211 | 3.290812e-57 | -8.615850e-47 |
| Msa0689780 | Msa1323290 | 0.825742 | 3.971900e-54 | -8.615850e-47 |
| Msa0703910 | Msa1323290 | 0.806439 | 8.221188e-50 | -8.615850e-47 |
| Msa0715410 | Msa1323290 | 0.802715 | 4.918961e-49 | -8.615850e-47 |
| Msa0721340 | Msa1323290 | 0.808392 | 3.167547e-50 | -8.615850e-47 |
| Msa0731180 | Msa1323290 | 0.843501 | 1.347552e-58 | -8.615850e-47 |
| Msa0741740 | Msa1323290 | 0.805381 | 1.372184e-49 | -8.615850e-47 |
| Msa0742150 | Msa1323290 | 0.825329 | 4.973967e-54 | -8.615850e-47 |
| Msa0749440 | Msa1323290 | 0.800204 | 1.608049e-48 | -8.615850e-47 |
| Msa0750850 | Msa1323290 | 0.804502 | 2.094874e-49 | -8.615850e-47 |
| Msa0751850 | Msa1323290 | 0.808073 | 3.704451e-50 | -8.615850e-47 |
| Msa0771580 | Msa1323290 | 0.841024 | 6.104938e-58 | -8.615850e-47 |
| Msa0786070 | Msa1323290 | 0.829306 | 5.541054e-55 | -8.615850e-47 |
| Msa0786430 | Msa1323290 | 0.801169 | 1.022170e-48 | -8.615850e-47 |
| Msa0796770 | Msa1323290 | 0.815902 | 7.285677e-52 | -8.615850e-47 |
| Msa0801730 | Msa1323290 | 0.810462 | 1.138907e-50 | -8.615850e-47 |
| Msa0805920 | Msa1323290 | 0.812296 | 4.553809e-51 | -8.615850e-47 |
| Msa0817460 | Msa1323290 | 0.804663 | 1.938960e-49 | -8.615850e-47 |
| Msa0823440 | Msa1323290 | 0.812986 | 3.216178e-51 | -8.615850e-47 |
| Msa0831850 | Msa1323290 | 0.811873 | 5.630433e-51 | -8.615850e-47 |
| Msa0124550 | Msa1323290 | 0.828658 | 7.956729e-55 | -8.615850e-47 |
| Msa0130520 | Msa1323290 | 0.808990 | 2.360796e-50 | -8.615850e-47 |
| Msa0135410 | Msa1323290 | 0.810279 | 1.247133e-50 | -8.615850e-47 |
| Msa0138020 | Msa1323290 | 0.843341 | 1.487525e-58 | -8.615850e-47 |
| Msa0142280 | Msa1323290 | 0.815574 | 8.623107e-52 | -8.615850e-47 |
| Msa0155340 | Msa1323290 | 0.816357 | 5.765965e-52 | -8.615850e-47 |
| Msa0174390 | Msa1323290 | 0.800965 | 1.124938e-48 | -8.615850e-47 |
| Msa0178510 | Msa1323290 | 0.830769 | 2.436613e-55 | -8.615850e-47 |
| Msa0186950 | Msa1323290 | 0.805761 | 1.141796e-49 | -8.615850e-47 |
| Msa0187250 | Msa1323290 | 0.801134 | 1.039229e-48 | -8.615850e-47 |
| Msa0187490 | Msa1323290 | 0.811137 | 8.136695e-51 | -8.615850e-47 |
| Msa0190530 | Msa1323290 | 0.801173 | 1.020067e-48 | -8.615850e-47 |
| Msa0206010 | Msa1323290 | 0.811356 | 7.294936e-51 | -8.615850e-47 |
| Msa0233370 | Msa1323290 | 0.815065 | 1.118647e-51 | -8.615850e-47 |
| Msa1250110 | Msa1323290 | 0.804372 | 2.229581e-49 | -8.615850e-47 |
| Msa1250730 | Msa1323290 | 0.800658 | 1.299515e-48 | -8.615850e-47 |
| Msa1270660 | Msa1323290 | 0.874954 | 4.506911e-68 | -8.615850e-47 |
| Msa1270730 | Msa1323290 | 0.877204 | 7.581328e-69 | -8.615850e-47 |
| Msa1276440 | Msa1323290 | 0.817812 | 2.716052e-52 | -8.615850e-47 |
| Msa1295330 | Msa1323290 | 0.811984 | 5.326427e-51 | -8.615850e-47 |
| Msa1305350 | Msa1323290 | 0.814228 | 1.714733e-51 | -8.615850e-47 |
| Msa1314770 | Msa1323290 | 0.806663 | 7.374109e-50 | -8.615850e-47 |
| Msa1323290 | Msa1331320 | 0.802677 | 5.008358e-49 | -8.615850e-47 |
| Msa1323290 | Msa1332050 | 0.811302 | 7.494710e-51 | -8.615850e-47 |
| Msa1323290 | Msa1335230 | 0.872708 | 2.583686e-67 | -8.615850e-47 |
| Msa1323290 | Msa1355890 | 0.811056 | 8.472908e-51 | -8.615850e-47 |
| Msa1323290 | Msa1365270 | 0.805242 | 1.467333e-49 | -8.615850e-47 |
| Msa1323290 | Msa1371940 | 0.800236 | 1.584189e-48 | -8.615850e-47 |
| Msa1323290 | Msa1372150 | 0.827621 | 1.414153e-54 | -8.615850e-47 |
| Msa1323290 | Msa1382790 | 0.800073 | 1.709806e-48 | -8.615850e-47 |
| Msa1323290 | Msa1394310 | 0.801032 | 1.090412e-48 | -8.615850e-47 |
| Msa1323290 | Msa1397120 | 0.823359 | 1.444876e-53 | -8.615850e-47 |
| Msa1323290 | Msa1403890 | 0.816894 | 4.371088e-52 | -8.615850e-47 |
| Msa1323290 | Msa1407470 | 0.817811 | 2.717070e-52 | -8.615850e-47 |
| Msa1323290 | Msa1407600 | 0.827923 | 1.196481e-54 | -8.615850e-47 |
| Msa1323290 | Msa1420270 | 0.833251 | 5.936132e-56 | -8.615850e-47 |
| Msa1323290 | Msa1423820 | 0.877362 | 6.677329e-69 | -8.615850e-47 |
| Msa1323290 | Msa1430130 | 0.809524 | 1.813275e-50 | -8.615850e-47 |
| Msa1323290 | Msa1444260 | 0.805171 | 1.518102e-49 | -8.615850e-47 |
| Msa1323290 | Msa1444740 | 0.802769 | 4.793343e-49 | -8.615850e-47 |
| Msa1323290 | Msa1460750 | 0.809644 | 1.709159e-50 | -8.615850e-47 |
| Msa0376910 | Msa1323290 | 0.822877 | 1.872350e-53 | -8.615850e-47 |
| Msa0397250 | Msa1323290 | 0.808693 | 2.731945e-50 | -8.615850e-47 |
| Msa0422180 | Msa1323290 | 0.803585 | 3.249146e-49 | -8.615850e-47 |
| Msa0471900 | Msa1323290 | 0.834677 | 2.609446e-56 | -8.615850e-47 |
| Msa0481280 | Msa1323290 | 0.820176 | 7.877667e-53 | -8.615850e-47 |
| Msa0482180 | Msa1323290 | 0.800635 | 1.314082e-48 | -8.615850e-47 |
| Msa0994370 | Msa1323290 | 0.811559 | 6.590365e-51 | -8.615850e-47 |
| Msa1026410 | Msa1323290 | 0.821833 | 3.272096e-53 | -8.615850e-47 |
| Msa1026640 | Msa1323290 | 0.817850 | 2.662957e-52 | -8.615850e-47 |
| Msa1063420 | Msa1323290 | 0.806929 | 6.479818e-50 | -8.615850e-47 |
| Msa1071320 | Msa1323290 | 0.807023 | 6.187376e-50 | -8.615850e-47 |
| Msa1077340 | Msa1323290 | 0.808614 | 2.841067e-50 | -8.615850e-47 |
| Msa1081790 | Msa1323290 | -0.803651 | 3.148524e-49 | -8.615850e-47 |
| Msa1087990 | Msa1323290 | 0.812926 | 3.315528e-51 | -8.615850e-47 |
| Msa1094280 | Msa1323290 | 0.800044 | 1.733377e-48 | -8.615850e-47 |
| Msa1098430 | Msa1323290 | 0.814071 | 1.856380e-51 | -8.615850e-47 |
| Msa1107190 | Msa1323290 | 0.805139 | 1.541641e-49 | -8.615850e-47 |
| Msa0240270 | Msa1323290 | 0.805556 | 1.261012e-49 | -8.615850e-47 |
| Msa0244140 | Msa1323290 | 0.829807 | 4.187610e-55 | -8.615850e-47 |
| Msa0244190 | Msa1323290 | 0.832638 | 8.431927e-56 | -8.615850e-47 |
| Msa0257500 | Msa1323290 | 0.816810 | 4.563610e-52 | -8.615850e-47 |
| Msa0262370 | Msa1323290 | 0.819761 | 9.801515e-53 | -8.615850e-47 |
| Msa0300150 | Msa1323290 | 0.816506 | 5.339297e-52 | -8.615850e-47 |
| Msa0319170 | Msa1323290 | 0.800425 | 1.450125e-48 | -8.615850e-47 |
| Msa0321080 | Msa1323290 | 0.815236 | 1.025287e-51 | -8.615850e-47 |
| Msa0322680 | Msa1323290 | 0.812227 | 4.712895e-51 | -8.615850e-47 |
| Msa0326110 | Msa1323290 | 0.807594 | 4.682592e-50 | -8.615850e-47 |
| Msa0346890 | Msa1323290 | 0.800032 | 1.742819e-48 | -8.615850e-47 |
| Msa0357790 | Msa1323290 | 0.814089 | 1.839957e-51 | -8.615850e-47 |
| Msa0357830 | Msa1323290 | 0.821240 | 4.485980e-53 | -8.615850e-47 |
| Msa0357840 | Msa1323290 | 0.820731 | 5.875533e-53 | -8.615850e-47 |
| Msa0357870 | Msa1323290 | 0.800134 | 1.661629e-48 | -8.615850e-47 |
| Msa1107260 | Msa1323290 | 0.822347 | 2.487041e-53 | -8.615850e-47 |
| Msa1115280 | Msa1323290 | 0.811694 | 6.159830e-51 | -8.615850e-47 |
| Msa1143020 | Msa1323290 | 0.805537 | 1.272801e-49 | -8.615850e-47 |
| Msa1144040 | Msa1323290 | 0.816836 | 4.503187e-52 | -8.615850e-47 |
| Msa1150900 | Msa1323290 | 0.813184 | 2.910385e-51 | -8.615850e-47 |
| Msa1207310 | Msa1323290 | 0.821574 | 3.755290e-53 | -8.615850e-47 |
| Msa1207350 | Msa1323290 | 0.806279 | 8.885359e-50 | -8.615850e-47 |
| Msa1224200 | Msa1323290 | 0.808098 | 3.658964e-50 | -8.615850e-47 |
| Msa0485490 | Msa1323290 | 0.825407 | 4.767825e-54 | -8.615850e-47 |
| Msa0487710 | Msa1323290 | 0.804693 | 1.911278e-49 | -8.615850e-47 |
| Msa0518380 | Msa1323290 | 0.806134 | 9.532634e-50 | -8.615850e-47 |
| Msa0530290 | Msa1323290 | 0.810430 | 1.157051e-50 | -8.615850e-47 |
| Msa0530650 | Msa1323290 | 0.841052 | 6.001295e-58 | -8.615850e-47 |
| Msa0549780 | Msa1323290 | 0.805230 | 1.476008e-49 | -8.615850e-47 |
| Msa0587190 | Msa1323290 | 0.834847 | 2.365150e-56 | -8.615850e-47 |
| Msa0847880 | Msa1323290 | 0.834078 | 3.689167e-56 | -8.615850e-47 |
| Msa0861570 | Msa1323290 | 0.805123 | 1.553782e-49 | -8.615850e-47 |
| Msa0862280 | Msa1323290 | 0.824480 | 7.890821e-54 | -8.615850e-47 |
| Msa0876360 | Msa1323290 | 0.815019 | 1.145609e-51 | -8.615850e-47 |
| Msa0902830 | Msa1323290 | 0.807701 | 4.444768e-50 | -8.615850e-47 |
| Msa0978700 | Msa1323290 | 0.821936 | 3.097243e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1323290 | MtrunA17_Chr8g0350281 | 95.699 | 186 | 7 | 1 | 1 | 186 | 1 | 185 | 4.81e-128 | 357 |
| Msa1323290 | MtrunA17_Chr8g0350221 | 53.933 | 178 | 58 | 6 | 7 | 167 | 5 | 175 | 2.70e-52 | 165 |
| Msa1323290 | MtrunA17_Chr8g0350241 | 53.672 | 177 | 61 | 5 | 7 | 168 | 5 | 175 | 5.89e-51 | 162 |
| Msa1323290 | MtrunA17_Chr8g0350231 | 51.099 | 182 | 58 | 5 | 7 | 167 | 5 | 176 | 2.08e-49 | 158 |
| Msa1323290 | MtrunA17_Chr8g0350271 | 51.412 | 177 | 64 | 5 | 7 | 167 | 5 | 175 | 5.05e-49 | 157 |
| Msa1323290 | MtrunA17_Chr3g0109941 | 51.412 | 177 | 65 | 5 | 7 | 168 | 5 | 175 | 9.01e-49 | 156 |
| Msa1323290 | MtrunA17_Chr8g0350291 | 51.705 | 176 | 64 | 5 | 7 | 167 | 5 | 174 | 7.28e-48 | 154 |
| Msa1323290 | MtrunA17_Chr8g0350211 | 37.500 | 128 | 76 | 3 | 7 | 131 | 2 | 128 | 4.73e-20 | 82.8 |
| Msa1323290 | MtrunA17_Chr8g0350191 | 36.923 | 130 | 74 | 5 | 7 | 131 | 2 | 128 | 3.14e-19 | 80.5 |
| Msa1323290 | MtrunA17_Chr8g0350201 | 36.923 | 130 | 74 | 5 | 7 | 131 | 2 | 128 | 4.41e-19 | 80.1 |
| Msa1323290 | MtrunA17_Chr7g0246561 | 36.471 | 170 | 87 | 9 | 7 | 168 | 2 | 158 | 2.07e-17 | 75.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 33 sgRNAs with CRISPR-Local
Find 48 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTCATTGGGATTCCAGTTT+TGG | 0.209973 | 8_4:-31543427 | Msa1323290:CDS |
| TTAGAAATCACCATTATTTC+CGG | 0.251148 | 8_4:-31543885 | Msa1323290:CDS |
| GAGTTATGGGTTGAGGGATT+GGG | 0.319102 | 8_4:-31543580 | Msa1323290:CDS |
| AAAACGAGGGTTTACTTTCA+TGG | 0.320231 | 8_4:-31543764 | Msa1323290:CDS |
| TGAGTTATGGGTTGAGGGAT+TGG | 0.329761 | 8_4:-31543581 | Msa1323290:CDS |
| AATTCAAATCATGTTGTCAT+TGG | 0.330631 | 8_4:-31543441 | Msa1323290:CDS |
| ATGTTCAAACTTTGAGTTAT+GGG | 0.393724 | 8_4:-31543593 | Msa1323290:CDS |
| AGTGGCTAGGATAGCCCTTT+CGG | 0.395513 | 8_4:-31543649 | Msa1323290:CDS |
| ATTCAAATCATGTTGTCATT+GGG | 0.399832 | 8_4:-31543440 | Msa1323290:CDS |
| TACAAAGGAGCTCGTCCTAT+TGG | 0.408643 | 8_4:-31543672 | Msa1323290:CDS |
| AACTTTGAGTTATGGGTTGA+GGG | 0.424777 | 8_4:-31543586 | Msa1323290:CDS |
| GATGTTCAAACTTTGAGTTA+TGG | 0.428751 | 8_4:-31543594 | Msa1323290:CDS |
| TATTGAGGATGTGGGGTTGA+AGG | 0.431275 | 8_4:-31543475 | Msa1323290:CDS |
| AAACTTTGAGTTATGGGTTG+AGG | 0.441165 | 8_4:-31543587 | Msa1323290:CDS |
| GCTATCCTAGCCACTCCAAT+AGG | 0.445086 | 8_4:+31543657 | None:intergenic |
| AGAACAAGGTATTGAGGATG+TGG | 0.474654 | 8_4:-31543484 | Msa1323290:CDS |
| TGCAAAATCAGTGACGTTTG+AGG | 0.496537 | 8_4:-31543709 | Msa1323290:CDS |
| TGAGGATGTGGGGTTGAAGG+TGG | 0.512663 | 8_4:-31543472 | Msa1323290:CDS |
| AAGTGTTGATCGAAATTCAA+AGG | 0.521135 | 8_4:-31543853 | Msa1323290:CDS |
| GAACAAGGTATTGAGGATGT+GGG | 0.522715 | 8_4:-31543483 | Msa1323290:CDS |
| GGTTGAGGGATTGGGATGGT+AGG | 0.532351 | 8_4:-31543572 | Msa1323290:CDS |
| AGTGTTGATCGAAATTCAAA+GGG | 0.547290 | 8_4:-31543852 | Msa1323290:CDS |
| GTCACCAAGAAAATCCGAAA+GGG | 0.572767 | 8_4:+31543635 | None:intergenic |
| GTGATTTCTAATGTGCGTGC+TGG | 0.574354 | 8_4:+31543897 | None:intergenic |
| GTGAGAAGGGTGACACAAGA+AGG | 0.595191 | 8_4:-31543525 | Msa1323290:CDS |
| TATGGGTTGAGGGATTGGGA+TGG | 0.614237 | 8_4:-31543576 | Msa1323290:CDS |
| AAATATCTCATAGAAATGGA+AGG | 0.619843 | 8_4:-31543927 | None:intergenic |
| AACAAGGTATTGAGGATGTG+GGG | 0.625303 | 8_4:-31543482 | Msa1323290:CDS |
| AGGAGCTCGTCCTATTGGAG+TGG | 0.651439 | 8_4:-31543667 | Msa1323290:CDS |
| GTACAATGCAAGAAGTACAA+AGG | 0.653282 | 8_4:-31543687 | Msa1323290:CDS |
| CGTCACCAAGAAAATCCGAA+AGG | 0.654815 | 8_4:+31543634 | None:intergenic |
| CTCGTCCTATTGGAGTGGCT+AGG | 0.670537 | 8_4:-31543662 | Msa1323290:CDS |
| AAAATGGTGAAGGAAAACGA+GGG | 0.775535 | 8_4:-31543777 | Msa1323290:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTAATTTTAGTGTGAGA+AGG | - | chr8_4:31543747-31543766 | Msa1323290:CDS | 20.0% |
| !!! | TATTAATTTTAGTGTGAGAA+GGG | - | chr8_4:31543748-31543767 | Msa1323290:CDS | 20.0% |
| ! | TTAGAAATCACCATTATTTC+CGG | - | chr8_4:31543401-31543420 | Msa1323290:CDS | 25.0% |
| !! | ATGTTCAAACTTTGAGTTAT+GGG | - | chr8_4:31543693-31543712 | Msa1323290:CDS | 25.0% |
| ! | AATTCAAATCATGTTGTCAT+TGG | - | chr8_4:31543845-31543864 | Msa1323290:CDS | 25.0% |
| ! | ATTCAAATCATGTTGTCATT+GGG | - | chr8_4:31543846-31543865 | Msa1323290:CDS | 25.0% |
| !!! | TTTGGGTTTTTTGTTTCTTT+TGG | - | chr8_4:31543877-31543896 | Msa1323290:CDS | 25.0% |
| !!! | TTGGGTTTTTTGTTTCTTTT+GGG | - | chr8_4:31543878-31543897 | Msa1323290:CDS | 25.0% |
| ! | TATGTTTTGTCCGGAAATAA+TGG | + | chr8_4:31543414-31543433 | None:intergenic | 30.0% |
| ! | ATCAACACTTATGTTTTGTC+CGG | + | chr8_4:31543423-31543442 | None:intergenic | 30.0% |
| !! | AAGTGTTGATCGAAATTCAA+AGG | - | chr8_4:31543433-31543452 | Msa1323290:CDS | 30.0% |
| !! | AGTGTTGATCGAAATTCAAA+GGG | - | chr8_4:31543434-31543453 | Msa1323290:CDS | 30.0% |
| ! | GATGTTCAAACTTTGAGTTA+TGG | - | chr8_4:31543692-31543711 | Msa1323290:CDS | 30.0% |
| TTGTGTGTAGAAAAAGAACA+AGG | - | chr8_4:31543788-31543807 | Msa1323290:CDS | 30.0% | |
| !! | AGAAAAAGAACAAGGTATTG+AGG | - | chr8_4:31543796-31543815 | Msa1323290:CDS | 30.0% |
| AGAAACAAAAAACCCAAAAC+TGG | + | chr8_4:31543875-31543894 | None:intergenic | 30.0% | |
| AAAAATGGTGAAGGAAAACG+AGG | - | chr8_4:31543508-31543527 | Msa1323290:CDS | 35.0% | |
| AAAATGGTGAAGGAAAACGA+GGG | - | chr8_4:31543509-31543528 | Msa1323290:CDS | 35.0% | |
| AAAACGAGGGTTTACTTTCA+TGG | - | chr8_4:31543522-31543541 | Msa1323290:CDS | 35.0% | |
| ! | GTACAATGCAAGAAGTACAA+AGG | - | chr8_4:31543599-31543618 | Msa1323290:CDS | 35.0% |
| ! | AAACTTTGAGTTATGGGTTG+AGG | - | chr8_4:31543699-31543718 | Msa1323290:CDS | 35.0% |
| ! | AACTTTGAGTTATGGGTTGA+GGG | - | chr8_4:31543700-31543719 | Msa1323290:CDS | 35.0% |
| CAACTCTTGCACGACAAAAA+TGG | - | chr8_4:31543493-31543512 | Msa1323290:CDS | 40.0% | |
| TTGCACGACAAAAATGGTGA+AGG | - | chr8_4:31543499-31543518 | Msa1323290:CDS | 40.0% | |
| !!! | AACGTCACTGATTTTGCATG+TGG | + | chr8_4:31543575-31543594 | None:intergenic | 40.0% |
| TGCAAAATCAGTGACGTTTG+AGG | - | chr8_4:31543577-31543596 | Msa1323290:CDS | 40.0% | |
| ! | ATAGCCCTTTCGGATTTTCT+TGG | - | chr8_4:31543647-31543666 | Msa1323290:CDS | 40.0% |
| GTCACCAAGAAAATCCGAAA+GGG | + | chr8_4:31543654-31543673 | None:intergenic | 40.0% | |
| GATTGGGATGGTAGGAAAAA+TGG | - | chr8_4:31543722-31543741 | Msa1323290:CDS | 40.0% | |
| !! | AGAACAAGGTATTGAGGATG+TGG | - | chr8_4:31543802-31543821 | Msa1323290:CDS | 40.0% |
| !! | GAACAAGGTATTGAGGATGT+GGG | - | chr8_4:31543803-31543822 | Msa1323290:CDS | 40.0% |
| !! | AACAAGGTATTGAGGATGTG+GGG | - | chr8_4:31543804-31543823 | Msa1323290:CDS | 40.0% |
| ! | TGTCATTGGGATTCCAGTTT+TGG | - | chr8_4:31543859-31543878 | Msa1323290:CDS | 40.0% |
| ! | GTCATTGGGATTCCAGTTTT+GGG | - | chr8_4:31543860-31543879 | Msa1323290:CDS | 40.0% |
| GTGATTTCTAATGTGCGTGC+TGG | + | chr8_4:31543392-31543411 | None:intergenic | 45.0% | |
| TACAAAGGAGCTCGTCCTAT+TGG | - | chr8_4:31543614-31543633 | Msa1323290:CDS | 45.0% | |
| CGTCACCAAGAAAATCCGAA+AGG | + | chr8_4:31543655-31543674 | None:intergenic | 45.0% | |
| ! | TGAGTTATGGGTTGAGGGAT+TGG | - | chr8_4:31543705-31543724 | Msa1323290:CDS | 45.0% |
| ! | GAGTTATGGGTTGAGGGATT+GGG | - | chr8_4:31543706-31543725 | Msa1323290:CDS | 45.0% |
| TATTGAGGATGTGGGGTTGA+AGG | - | chr8_4:31543811-31543830 | Msa1323290:CDS | 45.0% | |
| GCTATCCTAGCCACTCCAAT+AGG | + | chr8_4:31543632-31543651 | None:intergenic | 50.0% | |
| AGTGGCTAGGATAGCCCTTT+CGG | - | chr8_4:31543637-31543656 | Msa1323290:CDS | 50.0% | |
| ! | TATGGGTTGAGGGATTGGGA+TGG | - | chr8_4:31543710-31543729 | Msa1323290:CDS | 50.0% |
| GTGAGAAGGGTGACACAAGA+AGG | - | chr8_4:31543761-31543780 | Msa1323290:CDS | 50.0% | |
| AGGAGCTCGTCCTATTGGAG+TGG | - | chr8_4:31543619-31543638 | Msa1323290:CDS | 55.0% | |
| CTCGTCCTATTGGAGTGGCT+AGG | - | chr8_4:31543624-31543643 | Msa1323290:CDS | 55.0% | |
| GGTTGAGGGATTGGGATGGT+AGG | - | chr8_4:31543714-31543733 | Msa1323290:CDS | 55.0% | |
| TGAGGATGTGGGGTTGAAGG+TGG | - | chr8_4:31543814-31543833 | Msa1323290:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 31543374 | 31543934 | 31543374 | ID=Msa1323290;Name=Msa1323290 |
| chr8_4 | mRNA | 31543374 | 31543934 | 31543374 | ID=Msa1323290-mRNA-1;Parent=Msa1323290;Name=Msa1323290-mRNA-1;_AED=0.39;_eAED=0.39;_QI=0|-1|0|1|-1|1|1|0|186 |
| chr8_4 | exon | 31543374 | 31543934 | 31543374 | ID=Msa1323290-mRNA-1:exon:10272;Parent=Msa1323290-mRNA-1 |
| chr8_4 | CDS | 31543374 | 31543934 | 31543374 | ID=Msa1323290-mRNA-1:cds;Parent=Msa1323290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
