AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene047153


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene047153.t1 MTR_2g007450 58.696 276 106 4 3 272 2 275 3.73e-101 302
MS.gene047153.t1 MTR_4g098590 53.333 255 111 6 19 272 1 248 3.10e-76 237
MS.gene047153.t1 MTR_1g053025 49.624 266 124 6 16 279 1 258 1.38e-68 218
MS.gene047153.t1 MTR_2g007500 49.805 257 101 5 12 267 9 238 1.44e-68 216
MS.gene047153.t1 MTR_3g026920 45.324 278 117 5 17 279 19 276 7.49e-64 206
MS.gene047153.t1 MTR_5g083890 47.876 259 121 8 17 266 6 259 4.27e-55 186
MS.gene047153.t1 MTR_2g007400 42.491 273 141 8 7 272 2 265 1.33e-53 179
MS.gene047153.t1 MTR_1g107385 43.841 276 145 7 2 272 18 288 4.75e-51 173
MS.gene047153.t1 MTR_2g005990 41.912 272 147 7 13 278 2 268 1.29e-47 163
MS.gene047153.t1 MTR_7g075820 43.223 273 138 8 13 275 2 267 2.46e-47 162
MS.gene047153.t1 MTR_3g107160 41.045 268 136 10 9 272 2 251 1.38e-44 155
MS.gene047153.t1 MTR_2g008310 42.085 259 121 5 16 267 1 237 2.72e-44 155
MS.gene047153.t1 MTR_2g008320 41.603 262 132 7 10 266 45 290 7.23e-43 152
MS.gene047153.t1 MTR_3g107100 40.602 266 139 7 17 280 11 259 7.87e-41 146
MS.gene047153.t1 MTR_7g083740 37.500 256 119 5 1 254 1 217 1.45e-40 144
MS.gene047153.t1 MTR_3g099830 39.338 272 128 6 1 272 1 235 1.14e-39 142
MS.gene047153.t1 MTR_3g107120 37.956 274 141 8 17 278 9 265 2.51e-37 136
MS.gene047153.t1 MTR_2g007360 39.350 277 116 7 1 272 1 230 2.55e-37 136
MS.gene047153.t1 MTR_2g007530 46.237 186 78 5 9 175 13 195 6.41e-36 131
MS.gene047153.t1 MTR_7g007340 37.548 261 110 8 11 266 7 219 2.05e-31 120
MS.gene047153.t1 MTR_7g007370 35.018 277 116 8 1 276 1 214 2.97e-30 116
MS.gene047153.t1 MTR_3g107140 40.000 185 87 6 49 224 24 193 8.40e-29 109
MS.gene047153.t1 MTR_2g007550 38.384 198 89 7 1 193 1 170 9.16e-28 110
MS.gene047153.t1 MTR_7g115270 36.820 239 131 10 17 247 12 238 8.87e-26 105
MS.gene047153.t1 MTR_5g073420 36.134 238 132 7 1 237 1 219 1.37e-25 104
MS.gene047153.t1 MTR_5g058000 34.855 241 134 6 5 245 2 219 1.39e-25 104
MS.gene047153.t1 MTR_7g056433 41.500 200 101 8 17 215 12 196 3.40e-25 103
MS.gene047153.t1 MTR_8g085430 37.379 206 104 8 16 213 10 198 2.90e-24 100
MS.gene047153.t1 MTR_7g032380 36.893 206 108 7 16 218 10 196 6.20e-24 99.8
MS.gene047153.t1 MTR_1g041245 34.855 241 127 9 16 251 10 225 6.69e-24 100
MS.gene047153.t1 MTR_5g058100 34.483 232 136 6 12 243 4 219 8.16e-24 99.8
MS.gene047153.t1 MTR_1g108820 35.124 242 128 7 13 246 4 224 8.16e-24 99.8
MS.gene047153.t1 MTR_3g040700 33.032 221 114 6 3 213 29 225 9.80e-24 100
MS.gene047153.t1 MTR_1g085120 36.170 235 128 8 17 246 92 309 1.01e-23 100
MS.gene047153.t1 MTR_1g108820 35.124 242 128 7 13 246 4 224 1.03e-23 99.0
MS.gene047153.t1 MTR_5g082930 57.471 87 35 1 19 103 17 103 1.44e-23 95.5
MS.gene047153.t1 MTR_1g085120 36.170 235 128 8 17 246 179 396 1.62e-23 99.8
MS.gene047153.t1 MTR_6g011460 35.685 241 130 8 16 252 45 264 1.84e-23 99.4
MS.gene047153.t1 MTR_1g085120 36.170 235 128 8 17 246 167 384 2.08e-23 99.8
MS.gene047153.t1 MTR_3g108150 37.374 198 101 8 17 213 13 188 1.12e-22 96.7
MS.gene047153.t1 MTR_7g098570 32.721 272 159 9 12 282 15 263 2.95e-22 96.3
MS.gene047153.t1 MTR_6g040270 32.917 240 145 6 13 252 4 227 6.79e-22 94.4
MS.gene047153.t1 MTR_7g055943 34.043 235 135 8 14 245 37 254 7.28e-22 94.7
MS.gene047153.t1 MTR_2g007100 88.889 45 5 0 16 60 1 45 1.00e-21 87.0
MS.gene047153.t1 MTR_5g045510 33.333 201 111 6 16 213 11 191 1.12e-21 93.6
MS.gene047153.t1 MTR_7g056280 35.519 183 106 5 19 201 8 178 1.76e-21 94.4
MS.gene047153.t1 MTR_6g045333 33.333 210 120 8 8 213 52 245 1.79e-21 94.0
MS.gene047153.t1 MTR_7g098480 35.961 203 111 6 12 213 13 197 2.13e-21 93.6
MS.gene047153.t1 MTR_3g467400 32.780 241 135 8 17 245 3 228 6.63e-21 91.3
MS.gene047153.t1 MTR_2g007460 40.157 127 51 3 1 127 1 102 8.78e-21 85.5
MS.gene047153.t1 MTR_7g033470 37.500 176 52 5 5 178 5 124 1.30e-20 85.9
MS.gene047153.t1 MTR_5g073370 33.621 232 136 7 17 246 5 220 2.14e-20 90.1
MS.gene047153.t1 MTR_3g023630 37.019 208 101 7 13 213 4 188 3.17e-20 89.7
MS.gene047153.t1 MTR_5g045170 33.953 215 114 7 3 213 5 195 3.30e-20 89.7
MS.gene047153.t1 MTR_8g062310 32.046 259 149 11 12 267 20 254 4.47e-20 89.7
MS.gene047153.t1 MTR_3g105060 36.181 199 108 7 16 213 13 193 4.69e-20 89.0
MS.gene047153.t1 MTR_6g022500 33.884 242 122 9 16 246 100 314 5.95e-20 89.7
MS.gene047153.t1 MTR_7g026500 33.175 211 129 6 5 213 2 202 7.74e-20 88.6
MS.gene047153.t1 MTR_4g039440 33.617 235 132 6 16 246 33 247 7.75e-20 89.0
MS.gene047153.t1 MTR_5g061680 37.273 220 104 9 1 213 1 193 9.29e-20 87.8
MS.gene047153.t1 MTR_8g058965 36.134 238 116 13 1 221 1 219 1.10e-19 88.6
MS.gene047153.t1 MTR_7g056447 34.634 205 116 6 17 221 9 195 2.61e-19 85.9
MS.gene047153.t1 MTR_5g007410 34.653 202 117 8 12 213 21 207 2.61e-19 87.4
MS.gene047153.t1 MTR_6g044560 31.004 229 128 5 12 219 173 392 2.84e-19 87.8
MS.gene047153.t1 MTR_7g034090 40.373 161 72 7 17 171 4 146 3.17e-19 87.0
MS.gene047153.t1 MTR_3g082890 32.900 231 130 7 1 227 81 290 8.29e-19 86.3
MS.gene047153.t1 MTR_3g082890 32.900 231 130 7 1 227 1 210 1.01e-18 85.9
MS.gene047153.t1 MTR_6g044572 31.193 218 134 4 16 219 1 216 1.13e-18 85.5
MS.gene047153.t1 MTR_1089s0010 32.129 249 133 9 13 252 4 225 2.42e-18 84.3
MS.gene047153.t1 MTR_7g032370 36.735 196 99 8 32 222 5 180 3.21e-18 83.6
MS.gene047153.t1 MTR_8g062270 31.081 222 120 8 16 223 15 217 4.44e-18 84.0
MS.gene047153.t1 MTR_5g008950 32.766 235 124 7 19 247 1 207 5.84e-18 83.2
MS.gene047153.t1 MTR_3g071850 30.986 213 131 6 13 223 20 218 9.93e-18 83.6
MS.gene047153.t1 MTR_7g056420 31.801 261 132 8 17 275 9 225 1.13e-17 83.6
MS.gene047153.t1 MTR_1g013560 30.531 226 130 10 2 218 4 211 1.22e-17 82.0
MS.gene047153.t1 MTR_7g056430 31.801 261 132 8 17 275 9 225 1.39e-17 83.2
MS.gene047153.t1 MTR_3g036250 31.405 242 131 7 15 246 3 219 1.73e-17 81.6
MS.gene047153.t1 MTR_4g134150 33.000 200 104 8 17 213 14 186 1.80e-17 79.7
MS.gene047153.t1 MTR_6g022360 34.188 234 121 9 16 246 42 245 1.90e-17 82.0
MS.gene047153.t1 MTR_5g031970 27.798 277 162 9 7 278 6 249 2.03e-17 81.6
MS.gene047153.t1 MTR_0492s0020 30.645 248 145 8 5 252 74 294 2.07e-17 82.0
MS.gene047153.t1 MTR_1g013560 30.531 226 130 10 2 218 4 211 2.15e-17 82.0
MS.gene047153.t1 MTR_0543s0010 30.992 242 140 8 5 246 74 288 2.49e-17 81.6
MS.gene047153.t1 MTR_7g034110 31.897 232 131 8 16 237 10 224 5.75e-17 80.1
MS.gene047153.t1 MTR_5g008920 30.196 255 148 8 1 253 1 227 5.85e-17 80.5
MS.gene047153.t1 MTR_1g066830 32.020 203 120 7 12 213 3 188 6.31e-17 80.5
MS.gene047153.t1 MTR_5g084070 33.491 212 109 6 15 221 11 195 7.49e-17 80.5
MS.gene047153.t1 MTR_7g088260 34.615 208 105 7 12 213 86 268 1.30e-16 79.7
MS.gene047153.t1 MTR_7g114710 34.272 213 114 9 6 213 2 193 1.89e-16 79.0
MS.gene047153.t1 MTR_3g108560 32.683 205 112 8 15 218 18 197 2.57e-16 77.8
MS.gene047153.t1 MTR_3g108560 32.683 205 112 8 15 218 18 197 3.20e-16 78.2
MS.gene047153.t1 MTR_4g032730 29.258 229 141 8 1 221 1 216 3.61e-16 78.6
MS.gene047153.t1 MTR_2g036470 30.952 210 126 6 5 211 2 195 3.81e-16 78.2
MS.gene047153.t1 MTR_5g039490 31.553 206 119 6 13 211 16 206 4.22e-16 77.8
MS.gene047153.t1 MTR_8g058970 29.787 235 132 9 2 216 8 229 5.89e-16 77.8
MS.gene047153.t1 MTR_3g110010 34.146 205 111 7 11 213 7 189 7.02e-16 77.8
MS.gene047153.t1 MTR_3g109982 34.146 205 111 7 11 213 7 189 7.84e-16 77.8
MS.gene047153.t1 MTR_8g062080 34.685 222 115 12 2 213 8 209 8.16e-16 77.4
MS.gene047153.t1 MTR_8g062010 35.577 208 110 11 10 211 2 191 9.65e-16 77.0
MS.gene047153.t1 MTR_1g492880 45.794 107 54 3 13 119 2 104 9.84e-16 72.0
MS.gene047153.t1 MTR_7g007080 31.301 246 136 7 15 249 2 225 1.16e-15 76.6
MS.gene047153.t1 MTR_4g050250 34.146 246 125 15 2 228 9 236 1.29e-15 76.6
MS.gene047153.t1 MTR_8g077460 33.645 214 125 6 9 215 2 205 1.38e-15 76.3
MS.gene047153.t1 MTR_7g060470 33.663 202 121 4 17 218 3 191 1.63e-15 76.3
MS.gene047153.t1 MTR_0009s0080 32.828 198 115 6 18 213 19 200 3.03e-15 75.5
MS.gene047153.t1 MTR_1g492880 50.549 91 42 2 13 103 2 89 3.26e-15 70.1
MS.gene047153.t1 MTR_2g047858 31.579 209 118 8 17 218 115 305 3.50e-15 75.5
MS.gene047153.t1 MTR_8g467790 33.333 210 109 9 16 213 147 337 4.80e-15 75.1
MS.gene047153.t1 MTR_8g468810 30.472 233 125 9 5 223 13 222 6.11e-15 73.9
MS.gene047153.t1 MTR_8g468810 30.472 233 125 9 5 223 13 222 6.68e-15 73.9
MS.gene047153.t1 MTR_7g033990 32.020 203 119 6 14 213 8 194 6.90e-15 74.7
MS.gene047153.t1 MTR_8g468810 30.472 233 125 9 5 223 13 222 7.86e-15 73.9
MS.gene047153.t1 MTR_8g468810 30.472 233 125 9 5 223 13 222 8.63e-15 73.9
MS.gene047153.t1 MTR_1g011430 32.075 212 113 8 17 222 7 193 9.42e-15 73.9
MS.gene047153.t1 MTR_8g468810 30.472 233 125 9 5 223 13 222 1.31e-14 73.9
MS.gene047153.t1 MTR_1g014450 30.088 226 132 10 2 218 1 209 1.53e-14 73.6
MS.gene047153.t1 MTR_8g468910 35.593 177 95 8 17 189 48 209 2.65e-14 72.8
MS.gene047153.t1 MTR_1g016340 30.531 226 133 8 3 219 6 216 3.29e-14 72.8
MS.gene047153.t1 MTR_8g070950 29.057 265 154 11 4 262 2 238 3.93e-14 72.4
MS.gene047153.t1 MTR_1g016310 28.761 226 134 10 2 218 5 212 4.31e-14 71.6
MS.gene047153.t1 MTR_2g091145 29.778 225 132 8 2 217 6 213 5.08e-14 72.0
MS.gene047153.t1 MTR_1g016340 30.667 225 132 8 4 219 2 211 5.96e-14 71.6
MS.gene047153.t1 MTR_2g047872 29.911 224 133 10 2 218 5 211 7.54e-14 71.6
MS.gene047153.t1 MTR_1g016310 28.761 226 134 10 2 218 5 212 7.95e-14 71.6
MS.gene047153.t1 MTR_3g114200 34.146 164 91 7 3 165 5 152 1.06e-13 67.8
MS.gene047153.t1 MTR_2g008300 56.061 66 28 1 160 224 4 69 1.13e-13 65.1
MS.gene047153.t1 MTR_7g033915 30.802 237 119 9 16 247 10 206 1.23e-13 70.5
MS.gene047153.t1 MTR_8g468840 29.577 213 133 6 8 213 5 207 1.41e-13 70.9
MS.gene047153.t1 MTR_3g450920 38.926 149 74 6 63 211 59 190 2.72e-13 68.2
MS.gene047153.t1 MTR_8g468760 30.288 208 123 8 16 213 8 203 3.11e-13 69.7
MS.gene047153.t1 MTR_1g021825 30.493 223 128 7 1 217 1 202 3.39e-13 69.7
MS.gene047153.t1 MTR_7g034115 34.158 202 109 7 16 213 10 191 5.56e-13 68.6
MS.gene047153.t1 MTR_8g017280 28.788 198 118 7 1 190 13 195 1.02e-12 67.4
MS.gene047153.t1 MTR_8g445780 32.243 214 107 8 13 213 9 197 1.04e-12 68.2
MS.gene047153.t1 MTR_8g469020 32.735 223 117 10 11 213 1 210 1.37e-12 67.8
MS.gene047153.t1 MTR_7g033945 33.516 182 103 9 12 190 6 172 1.92e-12 64.7
MS.gene047153.t1 MTR_8g017280 28.788 198 118 7 1 190 13 195 1.95e-12 67.4
MS.gene047153.t1 MTR_3g023470 29.167 216 128 7 14 226 12 205 2.04e-12 67.0
MS.gene047153.t1 MTR_4g057725 29.778 225 135 9 2 219 7 215 2.26e-12 67.0
MS.gene047153.t1 MTR_1g021825 29.864 221 130 8 2 217 73 273 2.27e-12 67.4
MS.gene047153.t1 MTR_5g039970 30.435 207 115 8 17 215 19 204 2.29e-12 66.6
MS.gene047153.t1 MTR_2g099980 30.526 190 115 7 2 190 25 198 2.44e-12 67.0
MS.gene047153.t1 MTR_7g080440 30.208 192 96 7 14 194 12 176 3.28e-12 66.2
MS.gene047153.t1 MTR_7g023310 28.111 217 135 7 12 226 21 218 3.31e-12 66.6
MS.gene047153.t1 MTR_6g018660 32.632 190 109 6 13 194 16 194 3.37e-12 66.2
MS.gene047153.t1 MTR_3g006580 29.167 192 100 5 18 199 34 199 3.87e-12 66.2
MS.gene047153.t1 MTR_1g013630 28.571 238 143 8 14 240 36 257 3.92e-12 66.2
MS.gene047153.t1 MTR_2g072530 29.787 188 105 8 6 187 2 168 4.45e-12 66.2
MS.gene047153.t1 MTR_5g039450 28.980 245 119 8 13 246 2 202 4.54e-12 65.9
MS.gene047153.t1 MTR_5g087940 31.674 221 97 9 17 216 26 213 6.97e-12 65.5
MS.gene047153.t1 MTR_8g465380 31.746 189 109 6 17 199 12 186 8.36e-12 65.1
MS.gene047153.t1 MTR_7g075800 29.583 240 134 10 17 237 9 232 9.36e-12 65.5
MS.gene047153.t1 MTR_1g013580 30.317 221 131 10 2 215 4 208 1.04e-11 65.1
MS.gene047153.t1 MTR_3g036320 30.457 197 114 5 2 194 5 182 1.23e-11 64.7
MS.gene047153.t1 MTR_1g013840 29.474 190 108 7 10 189 49 222 1.53e-11 64.7
MS.gene047153.t1 MTR_2g083840 30.732 205 125 6 17 215 21 214 2.00e-11 64.3
MS.gene047153.t1 MTR_3g019240 30.172 232 125 9 2 216 11 222 2.15e-11 63.9
MS.gene047153.t1 MTR_3g005980 30.978 184 103 5 15 194 15 178 2.19e-11 63.9
MS.gene047153.t1 MTR_7g094030 32.258 186 101 9 11 193 22 185 2.22e-11 64.3
MS.gene047153.t1 MTR_6g006730 26.429 280 166 10 15 267 4 270 2.46e-11 64.3
MS.gene047153.t1 MTR_7g081290 42.857 84 48 0 2 85 3 86 2.90e-11 62.8
MS.gene047153.t1 MTR_5g092960 29.864 221 122 9 16 223 18 218 3.20e-11 63.5
MS.gene047153.t1 MTR_5g092960 29.864 221 122 9 16 223 18 218 4.21e-11 63.2
MS.gene047153.t1 MTR_2g090845 31.183 186 102 7 17 196 14 179 4.38e-11 63.2
MS.gene047153.t1 MTR_3g113782 44.444 63 35 0 1 63 1 63 4.46e-11 58.5
MS.gene047153.t1 MTR_5g080710 32.877 219 121 9 8 221 24 221 5.14e-11 63.2
MS.gene047153.t1 MTR_8g014290 30.723 166 98 5 9 164 2 160 5.86e-11 60.1
MS.gene047153.t1 MTR_2g007090 53.226 62 29 0 14 75 7 68 6.07e-11 62.0
MS.gene047153.t1 MTR_1g095750 49.315 73 31 1 6 78 35 101 7.18e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene047153.t1 AT5G56370 36.139 202 99 8 16 211 1 178 2.45e-25 103
MS.gene047153.t1 AT5G56370 36.139 202 99 8 16 211 1 178 3.32e-25 103
MS.gene047153.t1 AT5G56370 36.139 202 99 8 16 211 1 178 3.32e-25 103
MS.gene047153.t1 AT3G58940 32.766 235 131 8 16 237 1 221 8.12e-23 98.2
MS.gene047153.t1 AT3G58940 32.766 235 131 8 16 237 1 221 8.12e-23 98.2
MS.gene047153.t1 AT4G26350 34.158 202 112 5 16 215 1 183 1.22e-22 97.1
MS.gene047153.t1 AT3G44060 38.308 201 106 8 22 219 4 189 1.60e-22 96.7
MS.gene047153.t1 AT2G26860 34.653 202 112 7 16 213 1 186 2.32e-22 95.9
MS.gene047153.t1 AT2G26860 34.653 202 112 7 16 213 1 186 2.32e-22 95.9
MS.gene047153.t1 AT4G00160 32.707 266 155 8 1 265 1 243 2.33e-22 96.3
MS.gene047153.t1 AT2G29910 35.468 203 109 6 14 215 26 207 4.65e-22 94.7
MS.gene047153.t1 AT2G29910 35.468 203 109 6 14 215 2 183 4.88e-22 94.4
MS.gene047153.t1 AT2G29910 35.468 203 109 6 14 215 2 183 4.88e-22 94.4
MS.gene047153.t1 AT2G29910 35.468 203 109 6 14 215 2 183 5.31e-22 94.4
MS.gene047153.t1 AT2G29910 35.468 203 109 6 14 215 2 183 5.31e-22 94.4
MS.gene047153.t1 AT2G29910 35.468 203 109 6 14 215 2 183 5.31e-22 94.4
MS.gene047153.t1 AT2G29910 35.468 203 109 6 14 215 2 183 5.31e-22 94.4
MS.gene047153.t1 AT5G56440 35.922 206 104 8 16 215 1 184 6.01e-22 95.1
MS.gene047153.t1 AT3G58860 33.191 235 127 9 13 237 3 217 7.05e-22 95.1
MS.gene047153.t1 AT4G10400 34.826 201 113 7 16 215 1 184 1.09e-21 94.0
MS.gene047153.t1 AT4G10400 34.826 201 113 7 16 215 1 184 1.09e-21 94.0
MS.gene047153.t1 AT4G10400 34.826 201 113 7 16 215 1 184 1.09e-21 94.0
MS.gene047153.t1 AT4G14103 37.736 212 108 7 13 218 4 197 1.17e-21 94.4
MS.gene047153.t1 AT4G14096 39.423 208 100 8 17 218 8 195 1.20e-21 94.4
MS.gene047153.t1 AT4G14096 39.423 208 100 8 17 218 8 195 1.20e-21 94.4
MS.gene047153.t1 AT5G60610 34.500 200 110 6 16 215 1 179 1.31e-21 93.6
MS.gene047153.t1 AT5G60610 34.500 200 110 6 16 215 1 179 1.31e-21 93.6
MS.gene047153.t1 AT4G14103 37.736 212 108 7 13 218 4 197 1.34e-21 93.6
MS.gene047153.t1 AT4G14103 37.736 212 108 7 13 218 4 197 1.34e-21 93.6
MS.gene047153.t1 AT3G42770 38.350 206 99 9 19 213 1 189 1.53e-21 94.4
MS.gene047153.t1 AT3G50710 32.692 208 123 5 16 221 1 193 1.66e-21 94.0
MS.gene047153.t1 AT5G41840 34.348 230 125 8 5 221 2 218 1.81e-21 94.4
MS.gene047153.t1 AT4G09920 34.783 207 113 8 16 217 1 190 4.05e-21 90.9
MS.gene047153.t1 AT4G09920 34.783 207 113 8 16 217 1 190 4.05e-21 90.9
MS.gene047153.t1 AT4G09920 34.783 207 113 8 16 217 1 190 4.05e-21 90.9
MS.gene047153.t1 AT4G00315 31.220 205 119 6 16 215 1 188 6.74e-21 92.0
MS.gene047153.t1 AT4G09920 34.783 207 113 8 16 217 1 190 9.77e-21 90.5
MS.gene047153.t1 AT4G09920 34.783 207 113 8 16 217 1 190 9.77e-21 90.5
MS.gene047153.t1 AT5G38590 32.735 223 131 7 16 237 1 205 1.08e-20 89.7
MS.gene047153.t1 AT3G59200 35.377 212 107 9 17 218 7 198 1.79e-20 90.1
MS.gene047153.t1 AT1G69630 32.710 214 118 8 5 213 6 198 2.11e-20 90.9
MS.gene047153.t1 AT3G59200 35.377 212 107 9 17 218 7 198 2.80e-20 90.9
MS.gene047153.t1 AT5G38590 32.735 223 131 7 16 237 1 205 3.72e-20 89.7
MS.gene047153.t1 AT1G55660 30.660 212 135 6 4 215 40 239 3.87e-20 89.4
MS.gene047153.t1 AT5G53635 31.982 222 115 9 19 232 2 195 4.06e-20 89.7
MS.gene047153.t1 AT1G16930 32.178 202 113 8 17 215 15 195 5.31e-20 89.7
MS.gene047153.t1 AT1G16930 32.178 202 113 8 17 215 15 195 5.31e-20 89.7
MS.gene047153.t1 AT1G16930 32.178 202 113 8 17 215 15 195 5.31e-20 89.7
MS.gene047153.t1 AT5G56380 33.019 212 118 5 16 220 1 195 6.39e-20 89.4
MS.gene047153.t1 AT5G56380 33.019 212 118 5 16 220 1 195 6.39e-20 89.4
MS.gene047153.t1 AT1G55660 30.660 212 135 6 4 215 40 239 6.96e-20 89.4
MS.gene047153.t1 AT4G15060 31.452 248 143 10 16 253 25 255 8.87e-20 89.0
MS.gene047153.t1 AT3G58880 33.191 235 130 7 16 241 2 218 1.10e-19 88.6
MS.gene047153.t1 AT1G78750 31.193 218 125 8 4 213 5 205 1.12e-19 88.6
MS.gene047153.t1 AT1G78750 31.193 218 125 8 4 213 5 205 1.12e-19 88.6
MS.gene047153.t1 AT5G41830 33.178 214 124 5 17 221 13 216 1.22e-19 89.0
MS.gene047153.t1 AT5G38392 32.273 220 119 7 16 222 1 203 1.25e-19 85.5
MS.gene047153.t1 AT4G15060 31.452 248 143 10 16 253 171 401 1.50e-19 88.6
MS.gene047153.t1 AT1G21990 34.653 202 110 6 17 215 9 191 1.77e-19 88.2
MS.gene047153.t1 AT5G56410 34.091 220 108 11 16 215 1 203 1.78e-19 88.2
MS.gene047153.t1 AT3G59190 32.000 225 124 9 7 220 2 208 1.88e-19 87.8
MS.gene047153.t1 AT3G59190 32.727 220 119 9 7 215 2 203 1.93e-19 88.2
MS.gene047153.t1 AT3G56780 32.161 199 111 6 19 215 9 185 2.00e-19 88.2
MS.gene047153.t1 AT4G13985 27.778 288 171 9 2 267 5 277 2.20e-19 87.8
MS.gene047153.t1 AT3G56780 32.161 199 111 6 19 215 9 185 2.46e-19 87.4
MS.gene047153.t1 AT4G26340 33.838 198 114 5 16 213 1 181 2.91e-19 87.4
MS.gene047153.t1 AT3G56780 32.338 201 108 7 19 215 9 185 3.31e-19 87.0
MS.gene047153.t1 AT4G27050 36.818 220 100 9 17 216 4 204 3.34e-19 87.4
MS.gene047153.t1 AT4G27050 36.818 220 100 9 17 216 4 204 3.34e-19 87.4
MS.gene047153.t1 AT4G27050 36.818 220 100 9 17 216 4 204 3.34e-19 87.4
MS.gene047153.t1 AT4G27050 36.818 220 100 9 17 216 4 204 3.34e-19 87.4
MS.gene047153.t1 AT4G27050 36.818 220 100 9 17 216 4 204 3.34e-19 87.4
MS.gene047153.t1 AT3G62440 32.719 217 118 8 16 218 1 203 6.49e-19 86.7
MS.gene047153.t1 AT1G48400 31.071 280 161 10 9 278 2 259 7.81e-19 86.3
MS.gene047153.t1 AT1G48400 31.071 280 161 10 9 278 2 259 9.19e-19 86.3
MS.gene047153.t1 AT3G52680 31.349 252 137 9 1 246 6 227 1.26e-18 85.1
MS.gene047153.t1 AT3G52680 30.651 261 145 9 1 255 6 236 1.72e-18 85.1
MS.gene047153.t1 AT1G51370 29.515 227 135 6 12 237 14 216 2.68e-18 84.3
MS.gene047153.t1 AT1G51370 29.515 227 135 6 12 237 14 216 3.23e-18 84.3
MS.gene047153.t1 AT1G51370 29.515 227 135 6 12 237 14 216 3.63e-18 83.6
MS.gene047153.t1 AT3G58930 30.830 253 142 10 16 252 1 236 3.79e-18 84.3
MS.gene047153.t1 AT3G58930 30.830 253 142 10 16 252 1 236 3.79e-18 84.3
MS.gene047153.t1 AT3G58930 30.830 253 142 10 16 252 1 236 3.79e-18 84.3
MS.gene047153.t1 AT2G42720 36.232 207 114 8 16 217 1 194 5.16e-18 84.0
MS.gene047153.t1 AT5G22670 35.784 204 107 8 12 213 6 187 8.55e-18 83.2
MS.gene047153.t1 AT4G00320 33.178 214 124 6 17 221 13 216 9.87e-18 83.2
MS.gene047153.t1 AT2G29930 29.964 277 168 8 7 281 2 254 1.04e-17 83.2
MS.gene047153.t1 AT2G29930 29.964 277 168 8 7 281 2 254 1.04e-17 83.2
MS.gene047153.t1 AT5G53840 31.839 223 126 8 9 230 10 207 1.27e-17 82.8
MS.gene047153.t1 AT5G22720 27.149 221 115 3 8 213 14 203 1.47e-17 82.8
MS.gene047153.t1 AT3G03040 34.101 217 112 9 16 220 1 198 1.56e-17 82.4
MS.gene047153.t1 AT3G58960 33.173 208 119 7 16 220 1 191 1.61e-17 82.4
MS.gene047153.t1 AT3G44810 30.638 235 140 6 11 237 1 220 2.29e-17 82.0
MS.gene047153.t1 AT3G59150 32.843 204 115 7 17 213 13 201 2.66e-17 82.0
MS.gene047153.t1 AT1G78760 25.177 282 156 9 14 267 13 267 3.29e-17 81.6
MS.gene047153.t1 AT3G58920 34.112 214 121 8 16 221 1 202 3.45e-17 81.6
MS.gene047153.t1 AT5G38396 31.604 212 127 6 16 220 1 201 8.29e-17 80.5
MS.gene047153.t1 AT2G26030 29.960 247 136 8 17 253 4 223 1.38e-16 79.7
MS.gene047153.t1 AT2G26030 29.960 247 136 8 17 253 4 223 1.38e-16 79.7
MS.gene047153.t1 AT2G26030 29.960 247 136 8 17 253 4 223 1.49e-16 79.7
MS.gene047153.t1 AT5G62970 30.493 223 118 7 16 215 1 209 1.89e-16 79.3
MS.gene047153.t1 AT3G59160 32.159 227 126 8 13 219 9 227 2.20e-16 79.3
MS.gene047153.t1 AT5G56690 29.245 212 107 7 16 211 1 185 2.28e-16 79.0
MS.gene047153.t1 AT1G32375 32.683 205 114 9 16 215 1 186 2.35e-16 79.0
MS.gene047153.t1 AT1G32375 32.683 205 114 9 16 215 1 186 2.35e-16 79.0
MS.gene047153.t1 AT5G56420 31.527 203 114 8 17 215 6 187 2.51e-16 79.0
MS.gene047153.t1 AT5G56420 31.527 203 114 8 17 215 6 187 2.51e-16 79.0
MS.gene047153.t1 AT5G56420 31.527 203 114 8 17 215 6 187 2.51e-16 79.0
MS.gene047153.t1 AT1G66290 29.258 229 120 9 4 222 16 212 3.36e-16 78.6
MS.gene047153.t1 AT3G59210 33.491 212 115 8 17 220 7 200 4.46e-16 78.2
MS.gene047153.t1 AT3G59210 33.491 212 115 8 17 220 7 200 4.46e-16 78.2
MS.gene047153.t1 AT3G59210 33.491 212 115 8 17 220 7 200 4.46e-16 78.2
MS.gene047153.t1 AT3G59210 33.491 212 115 8 17 220 7 200 4.46e-16 78.2
MS.gene047153.t1 AT3G59210 33.491 212 115 8 17 220 7 200 4.46e-16 78.2
MS.gene047153.t1 AT5G44950 30.769 260 140 9 17 271 4 228 6.13e-16 77.8
MS.gene047153.t1 AT3G59240 32.243 214 119 9 17 222 8 203 6.39e-16 77.8
MS.gene047153.t1 AT5G22730 28.636 220 136 7 2 219 13 213 6.59e-16 77.4
MS.gene047153.t1 AT1G58310 32.536 209 122 7 17 213 8 209 8.48e-16 77.4
MS.gene047153.t1 AT5G22730 28.636 220 136 7 2 219 13 213 9.12e-16 77.4
MS.gene047153.t1 AT5G22730 28.636 220 136 7 2 219 13 213 9.12e-16 77.4
MS.gene047153.t1 AT5G53640 32.487 197 111 7 17 213 22 196 1.12e-15 74.7
MS.gene047153.t1 AT1G26890 34.444 180 92 8 19 196 40 195 1.91e-15 75.5
MS.gene047153.t1 AT1G26890 34.444 180 92 8 19 196 40 195 1.91e-15 75.5
MS.gene047153.t1 AT3G49150 30.876 217 123 10 14 222 13 210 2.06e-15 76.3
MS.gene047153.t1 AT3G59170 32.735 223 124 8 13 215 3 219 2.34e-15 76.3
MS.gene047153.t1 AT3G03030 32.877 219 113 10 16 220 1 199 2.78e-15 75.1
MS.gene047153.t1 AT5G22610 29.778 225 127 9 5 218 3 207 2.98e-15 75.9
MS.gene047153.t1 AT5G22610 29.778 225 127 9 5 218 3 207 3.27e-15 75.9
MS.gene047153.t1 AT5G22660 28.745 247 146 9 9 252 5 224 3.76e-15 74.7
MS.gene047153.t1 AT1G26890 34.444 180 92 8 19 196 40 195 3.84e-15 75.1
MS.gene047153.t1 AT1G26890 34.444 180 92 8 19 196 40 195 3.84e-15 75.1
MS.gene047153.t1 AT5G38390 33.796 216 115 9 16 229 1 190 4.07e-15 75.5
MS.gene047153.t1 AT4G13965 28.634 227 131 5 17 237 10 211 4.57e-15 75.1
MS.gene047153.t1 AT3G26922 31.188 202 115 7 17 215 14 194 4.77e-15 74.3
MS.gene047153.t1 AT3G26922 31.188 202 115 7 17 215 14 194 4.77e-15 74.3
MS.gene047153.t1 AT3G03030 33.645 214 108 10 16 215 1 194 5.18e-15 75.1
MS.gene047153.t1 AT1G26890 34.444 180 92 8 19 196 40 195 5.60e-15 74.7
MS.gene047153.t1 AT1G60400 33.333 204 115 9 13 213 10 195 8.76e-15 74.3
MS.gene047153.t1 AT4G22280 34.146 205 103 10 16 213 1 180 1.12e-14 73.9
MS.gene047153.t1 AT5G22660 28.936 235 143 8 6 237 2 215 1.40e-14 73.9
MS.gene047153.t1 AT4G22280 33.659 205 104 9 16 213 1 180 1.87e-14 72.8
MS.gene047153.t1 AT2G04230 30.198 202 124 6 17 215 13 200 2.44e-14 73.2
MS.gene047153.t1 AT1G78730 26.829 205 107 6 14 215 19 183 4.86e-14 72.0
MS.gene047153.t1 AT3G60040 29.493 217 115 8 17 213 13 211 5.85e-14 72.0
MS.gene047153.t1 AT5G22700 29.302 215 130 8 17 230 6 199 7.02e-14 71.6
MS.gene047153.t1 AT5G22700 29.302 215 130 8 17 230 6 199 7.02e-14 71.6
MS.gene047153.t1 AT5G22700 29.302 215 130 8 17 230 6 199 7.02e-14 71.6
MS.gene047153.t1 AT5G22700 29.302 215 130 8 17 230 6 199 7.02e-14 71.6
MS.gene047153.t1 AT5G22700 29.302 215 130 8 17 230 43 236 7.57e-14 71.6
MS.gene047153.t1 AT5G22700 29.302 215 130 8 17 230 43 236 8.10e-14 71.6
MS.gene047153.t1 AT3G60040 29.493 217 115 8 17 213 232 430 8.36e-14 72.0
MS.gene047153.t1 AT3G60040 29.493 217 115 8 17 213 233 431 8.44e-14 72.0
MS.gene047153.t1 AT3G60040 29.493 217 115 8 17 213 232 430 9.50e-14 71.6
MS.gene047153.t1 AT3G60040 29.493 217 115 8 17 213 230 428 9.67e-14 71.6
MS.gene047153.t1 AT1G19070 47.826 69 36 0 16 84 1 69 9.69e-14 65.9
MS.gene047153.t1 AT1G60410 31.579 209 121 8 9 213 2 192 1.01e-13 71.2
MS.gene047153.t1 AT5G27750 28.641 206 125 6 17 215 5 195 1.27e-13 70.9
MS.gene047153.t1 AT2G42730 29.858 211 118 8 17 215 5 197 1.35e-13 70.9
MS.gene047153.t1 AT5G03100 31.100 209 112 10 12 217 4 183 1.40e-13 70.1
MS.gene047153.t1 AT5G03100 31.100 209 112 10 12 217 4 183 1.40e-13 70.1
MS.gene047153.t1 AT5G18780 27.755 245 146 10 9 247 3 222 1.41e-13 70.5
MS.gene047153.t1 AT5G18780 27.755 245 146 10 9 247 3 222 1.41e-13 70.5
MS.gene047153.t1 AT3G62430 30.392 204 122 7 16 215 1 188 1.62e-13 70.5
MS.gene047153.t1 AT5G18780 27.869 244 145 10 9 246 3 221 2.07e-13 70.1
MS.gene047153.t1 AT5G18780 27.869 244 145 10 9 246 3 221 2.07e-13 70.1
MS.gene047153.t1 AT5G27750 28.641 206 125 6 17 215 5 195 2.54e-13 69.7
MS.gene047153.t1 AT4G13960 32.174 230 124 8 16 235 1 208 2.59e-13 70.1
MS.gene047153.t1 AT4G13960 32.174 230 124 8 16 235 1 208 2.59e-13 70.1
MS.gene047153.t1 AT5G35995 31.646 237 125 11 14 241 2 210 3.11e-13 69.7
MS.gene047153.t1 AT5G35995 31.646 237 125 11 14 241 2 210 3.11e-13 69.7
MS.gene047153.t1 AT1G13780 30.516 213 112 11 17 214 10 201 4.15e-13 69.3
MS.gene047153.t1 AT5G25850 28.910 211 122 5 16 223 19 204 4.27e-13 69.3
MS.gene047153.t1 AT3G51530 29.730 222 130 8 1 220 14 211 4.76e-13 69.3
MS.gene047153.t1 AT1G13780 30.516 213 112 11 17 214 10 201 5.63e-13 68.6
MS.gene047153.t1 AT1G80470 31.132 212 130 8 4 215 2 197 7.26e-13 68.6
MS.gene047153.t1 AT3G59230 29.545 220 122 10 17 221 12 213 8.12e-13 68.6
MS.gene047153.t1 AT3G59250 28.251 223 112 7 17 237 7 183 8.94e-13 68.2
MS.gene047153.t1 AT1G66300 26.977 215 134 8 4 216 16 209 9.04e-13 68.6
MS.gene047153.t1 AT5G44490 26.906 223 129 7 1 213 1 199 1.17e-12 68.2
MS.gene047153.t1 AT5G44490 26.906 223 129 7 1 213 1 199 1.62e-12 67.8
MS.gene047153.t1 AT5G44980 31.343 201 120 7 17 215 4 188 2.19e-12 66.6
MS.gene047153.t1 AT5G44980 31.343 201 120 7 17 215 4 188 2.19e-12 66.6
MS.gene047153.t1 AT3G49480 27.885 208 122 7 17 213 12 202 2.45e-12 67.0
MS.gene047153.t1 AT1G22000 34.375 160 81 6 19 176 31 168 2.52e-12 67.0
MS.gene047153.t1 AT3G44080 33.679 193 99 7 14 197 7 179 2.55e-12 67.0
MS.gene047153.t1 AT5G02930 28.033 239 94 9 2 215 16 201 2.60e-12 67.0
MS.gene047153.t1 AT1G52650 31.250 208 116 8 16 215 1 189 3.08e-12 67.0
MS.gene047153.t1 AT5G41630 29.954 217 121 7 13 215 8 207 3.79e-12 66.6
MS.gene047153.t1 AT5G18770 26.633 199 133 5 17 215 24 209 3.97e-12 66.6
MS.gene047153.t1 AT5G18770 26.633 199 133 5 17 215 24 209 4.00e-12 66.2
MS.gene047153.t1 AT1G64540 33.168 202 102 10 19 217 7 178 4.01e-12 66.6
MS.gene047153.t1 AT1G64540 33.168 202 102 10 19 217 7 178 4.01e-12 66.6
MS.gene047153.t1 AT3G58820 46.753 77 33 1 16 84 1 77 4.10e-12 66.2
MS.gene047153.t1 AT5G38590 29.775 178 105 6 16 189 1 162 4.48e-12 65.5
MS.gene047153.t1 AT5G44980 31.343 201 120 7 17 215 4 188 4.58e-12 66.2
MS.gene047153.t1 AT5G44980 31.343 201 120 7 17 215 4 188 4.58e-12 66.2
MS.gene047153.t1 AT3G58900 33.173 208 109 9 16 213 1 188 5.59e-12 65.5
MS.gene047153.t1 AT3G58900 33.173 208 109 9 16 213 1 188 6.74e-12 65.5
MS.gene047153.t1 AT3G58900 33.173 208 109 9 16 213 1 188 6.74e-12 65.5
MS.gene047153.t1 AT3G59000 32.632 190 101 7 16 194 1 174 7.96e-12 65.5
MS.gene047153.t1 AT3G58900 33.173 208 109 9 16 213 1 188 9.17e-12 65.5
MS.gene047153.t1 AT5G44960 27.451 255 162 8 15 266 3 237 9.41e-12 65.1
MS.gene047153.t1 AT5G50270 33.171 205 112 8 16 215 1 185 1.09e-11 64.7
MS.gene047153.t1 AT5G56400 29.665 209 114 7 15 215 31 214 1.74e-11 64.7
MS.gene047153.t1 AT5G38565 55.769 52 23 0 16 67 1 52 2.43e-11 63.9
MS.gene047153.t1 AT3G26930 30.500 200 112 7 17 215 21 194 2.80e-11 63.9
MS.gene047153.t1 AT3G44090 28.182 220 126 6 4 213 11 208 2.89e-11 63.9
MS.gene047153.t1 AT5G50270 33.171 205 112 8 16 215 1 185 2.91e-11 63.9
MS.gene047153.t1 AT5G38570 28.395 243 134 9 16 246 1 215 3.82e-11 63.2
MS.gene047153.t1 AT3G49020 28.922 204 120 7 15 215 20 201 5.39e-11 63.2
MS.gene047153.t1 AT1G66310 27.488 211 128 8 9 216 11 199 7.44e-11 62.8
MS.gene047153.t1 AT3G59000 46.753 77 33 1 16 84 1 77 8.18e-11 62.0
MS.gene047153.t1 AT3G49030 30.198 202 123 7 13 213 17 201 9.75e-11 62.4

Find 60 sgRNAs with CRISPR-Local

Find 67 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATATACGCTCTTGTCAATT+TGG 0.122850 2.2:+72853304 None:intergenic
GTTGAGCCATTCGTTGAAAT+TGG 0.201170 2.2:+72853673 None:intergenic
CTCAATCTTTGTGTCTTTCA+TGG 0.238381 2.2:-72853614 MS.gene047153:CDS
GCTTGTTGCAACTGCTTCTT+TGG 0.287342 2.2:+72853910 None:intergenic
CCTGATCTTGGCTTTCATCT+AGG 0.302863 2.2:-72853701 MS.gene047153:CDS
ATCACTCAAAACCCTTCATT+TGG 0.321087 2.2:-72853471 MS.gene047153:CDS
AAATGCTTTCCACATAAAAT+AGG 0.334879 2.2:+72853265 None:intergenic
CGAAACTGTGGACTCATCTA+TGG 0.342731 2.2:-72853880 MS.gene047153:CDS
ATATACGCTCTTGTCAATTT+GGG 0.343319 2.2:+72853305 None:intergenic
CAATACGTTAACCCTGATCT+TGG 0.358149 2.2:-72853713 MS.gene047153:CDS
TACGTTGATGAAGTGGAGAT+TGG 0.366096 2.2:+72853847 None:intergenic
TTAAAACGGAGACTTGATTC+AGG 0.369039 2.2:+72853812 None:intergenic
CTGATCTTGGCTTTCATCTA+GGG 0.377321 2.2:-72853700 MS.gene047153:CDS
AATAGTAGATCCTCAAGAAT+AGG 0.377730 2.2:+72853395 None:intergenic
TTGAGCCATTCGTTGAAATT+GGG 0.396386 2.2:+72853674 None:intergenic
TTGGCCTCTCGAGACGCTGC+TGG 0.407573 2.2:-72853770 MS.gene047153:CDS
GTTGCAACTGCTTCTTTGGT+GGG 0.423306 2.2:+72853914 None:intergenic
ATAGTAGATCCTCAAGAATA+GGG 0.424558 2.2:+72853396 None:intergenic
CCTAGATGAAAGCCAAGATC+AGG 0.438970 2.2:+72853701 None:intergenic
CAAGTTTGTAGACTCCGTTT+TGG 0.443398 2.2:-72853789 MS.gene047153:CDS
GATGGAAATCTAAATCCAAT+AGG 0.443582 2.2:+72853491 None:intergenic
GACTAACCTCATAGTGTGTT+GGG 0.457961 2.2:+72853201 None:intergenic
TGTTGCAACTGCTTCTTTGG+TGG 0.460948 2.2:+72853913 None:intergenic
AGTCTACAAACTTGTTAAAA+CGG 0.461537 2.2:+72853798 None:intergenic
CTCAGTAACTACTGTGTGAA+TGG 0.462441 2.2:-72853524 MS.gene047153:CDS
ATTGAATGAGATCCAAATGA+AGG 0.479396 2.2:+72853459 None:intergenic
GAGACTTACAAGGGTTGTGC+AGG 0.487887 2.2:+72853550 None:intergenic
GGTTGGATGCCCTATTCTTG+AGG 0.503577 2.2:-72853405 MS.gene047153:CDS
ACGTTGATGAAGTGGAGATT+GGG 0.503607 2.2:+72853848 None:intergenic
CCACTCTTACGTTGATGAAG+TGG 0.505390 2.2:+72853840 None:intergenic
GGCAGTAGCAGCGGCGCAGA+TGG 0.505785 2.2:-72853990 MS.gene047153:CDS
AGACTAACCTCATAGTGTGT+TGG 0.510934 2.2:+72853200 None:intergenic
TGAAGGAAAGATGCGGCAAT+CGG 0.520574 2.2:-72854026 None:intergenic
GGTTTCCCAATTTCAACGAA+TGG 0.521231 2.2:-72853679 MS.gene047153:CDS
AAGATGCTGACTGGCAAGTT+GGG 0.525793 2.2:+72853575 None:intergenic
CAAAAGAGAGAATGCGGCAG+AGG 0.527010 2.2:+72853939 None:intergenic
TTCAACAGCGGCAGTAGCAG+CGG 0.527111 2.2:-72853999 MS.gene047153:CDS
AGCGTCTCGAGAGGCCAAAA+CGG 0.535177 2.2:+72853775 None:intergenic
TACTGAGGTTGAGACTTACA+AGG 0.542973 2.2:+72853540 None:intergenic
GAAGATGCTGACTGGCAAGT+TGG 0.556534 2.2:+72853574 None:intergenic
CTGGCAAGTTGGGTAGGCAT+TGG 0.557519 2.2:+72853585 None:intergenic
TAACGTATTGAATATAGAAG+TGG 0.569143 2.2:+72853726 None:intergenic
TTGAATGAGATCCAAATGAA+GGG 0.577864 2.2:+72853460 None:intergenic
ATGCGGCAGAGGATATCGTC+AGG 0.580098 2.2:+72853950 None:intergenic
CCACTTCATCAACGTAAGAG+TGG 0.602508 2.2:-72853840 MS.gene047153:CDS
TGCTGACTGGCAAGTTGGGT+AGG 0.602579 2.2:+72853579 None:intergenic
GTGCAGGTGAAGATGCTGAC+TGG 0.607550 2.2:+72853566 None:intergenic
AGAGCCAGCAGCGTCTCGAG+AGG 0.608138 2.2:+72853766 None:intergenic
GTTGTACCCAACACACTATG+AGG 0.625945 2.2:-72853207 MS.gene047153:CDS
GTCTACCGCGTTGAACAGCA+AGG 0.630496 2.2:+72853651 None:intergenic
ACTGAGGTTGAGACTTACAA+GGG 0.636672 2.2:+72853541 None:intergenic
TTGTGTGATATATACTTCAG+TGG 0.647628 2.2:-72853374 MS.gene047153:CDS
CTAGATGAAAGCCAAGATCA+GGG 0.648631 2.2:+72853702 None:intergenic
TGATATATACTTCAGTGGCG+AGG 0.664076 2.2:-72853369 MS.gene047153:CDS
CTCAACCTTGCTGTTCAACG+CGG 0.683055 2.2:-72853656 MS.gene047153:CDS
CATTCACACAGTAGTTACTG+AGG 0.685759 2.2:+72853525 None:intergenic
TGGGAACAAAAGAGAGAATG+CGG 0.687642 2.2:+72853933 None:intergenic
GCAATCGGAAAATTCAACAG+CGG 0.725767 2.2:-72854011 MS.gene047153:CDS
ACAACGTGGATTTATCTATG+CGG 0.772816 2.2:+72853225 None:intergenic
ATAGTGTGTTGGGTACAACG+TGG 0.793067 2.2:+72853211 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AAATGCTTTCCACATAAAAT+AGG + chr2.2:72853944-72853963 None:intergenic 25.0%
! TAACGTATTGAATATAGAAG+TGG + chr2.2:72853483-72853502 None:intergenic 25.0%
!!! AGTCTACAAACTTGTTAAAA+CGG + chr2.2:72853411-72853430 None:intergenic 25.0%
!!! TAAGTTTTTAAGCTCTTGAA+GGG + chr2.2:72853875-72853894 None:intergenic 25.0%
AATAGTAGATCCTCAAGAAT+AGG + chr2.2:72853814-72853833 None:intergenic 30.0%
ATAGTAGATCCTCAAGAATA+GGG + chr2.2:72853813-72853832 None:intergenic 30.0%
ATATACGCTCTTGTCAATTT+GGG + chr2.2:72853904-72853923 None:intergenic 30.0%
ATTGAATGAGATCCAAATGA+AGG + chr2.2:72853750-72853769 None:intergenic 30.0%
GATGGAAATCTAAATCCAAT+AGG + chr2.2:72853718-72853737 None:intergenic 30.0%
TATATACGCTCTTGTCAATT+TGG + chr2.2:72853905-72853924 None:intergenic 30.0%
TTGAATGAGATCCAAATGAA+GGG + chr2.2:72853749-72853768 None:intergenic 30.0%
TTGTGTGATATATACTTCAG+TGG - chr2.2:72853832-72853851 MS.gene047153:CDS 30.0%
! AATGGCTTTTCTTTTCCTAT+TGG - chr2.2:72853700-72853719 MS.gene047153:CDS 30.0%
!! CTAAGTTTTTAAGCTCTTGA+AGG + chr2.2:72853876-72853895 None:intergenic 30.0%
!!! GATTTTTTGTTGTTTCTGGT+TGG - chr2.2:72853784-72853803 MS.gene047153:CDS 30.0%
!!! TCGAGATTTTTTGTTGTTTC+TGG - chr2.2:72853780-72853799 MS.gene047153:CDS 30.0%
ACAACGTGGATTTATCTATG+CGG + chr2.2:72853984-72854003 None:intergenic 35.0%
ATCACTCAAAACCCTTCATT+TGG - chr2.2:72853735-72853754 MS.gene047153:CDS 35.0%
CTCAATCTTTGTGTCTTTCA+TGG - chr2.2:72853592-72853611 MS.gene047153:CDS 35.0%
TTAAAACGGAGACTTGATTC+AGG + chr2.2:72853397-72853416 None:intergenic 35.0%
TTGAGCCATTCGTTGAAATT+GGG + chr2.2:72853535-72853554 None:intergenic 35.0%
!!! AAATGAAGGGTTTTGAGTGA+TGG + chr2.2:72853736-72853755 None:intergenic 35.0%
ACTGAGGTTGAGACTTACAA+GGG + chr2.2:72853668-72853687 None:intergenic 40.0%
AGACTAACCTCATAGTGTGT+TGG + chr2.2:72854009-72854028 None:intergenic 40.0%
CAATACGTTAACCCTGATCT+TGG - chr2.2:72853493-72853512 MS.gene047153:CDS 40.0%
CATTCACACAGTAGTTACTG+AGG + chr2.2:72853684-72853703 None:intergenic 40.0%
CTAGATGAAAGCCAAGATCA+GGG + chr2.2:72853507-72853526 None:intergenic 40.0%
CTCAGTAACTACTGTGTGAA+TGG - chr2.2:72853682-72853701 MS.gene047153:CDS 40.0%
GACTAACCTCATAGTGTGTT+GGG + chr2.2:72854008-72854027 None:intergenic 40.0%
GCAATCGGAAAATTCAACAG+CGG - chr2.2:72853195-72853214 MS.gene047153:CDS 40.0%
GGTTTCCCAATTTCAACGAA+TGG - chr2.2:72853527-72853546 MS.gene047153:CDS 40.0%
GTTGAGCCATTCGTTGAAAT+TGG + chr2.2:72853536-72853555 None:intergenic 40.0%
TACTGAGGTTGAGACTTACA+AGG + chr2.2:72853669-72853688 None:intergenic 40.0%
TGATATATACTTCAGTGGCG+AGG - chr2.2:72853837-72853856 MS.gene047153:CDS 40.0%
TGGGAACAAAAGAGAGAATG+CGG + chr2.2:72853276-72853295 None:intergenic 40.0%
! ACGTTGATGAAGTGGAGATT+GGG + chr2.2:72853361-72853380 None:intergenic 40.0%
! CAAGTTTGTAGACTCCGTTT+TGG - chr2.2:72853417-72853436 MS.gene047153:CDS 40.0%
! CTGATCTTGGCTTTCATCTA+GGG - chr2.2:72853506-72853525 MS.gene047153:CDS 40.0%
! GCTCATGCTCCTATTTTATG+TGG - chr2.2:72853932-72853951 MS.gene047153:CDS 40.0%
! TACGTTGATGAAGTGGAGAT+TGG + chr2.2:72853362-72853381 None:intergenic 40.0%
ATAGTGTGTTGGGTACAACG+TGG + chr2.2:72853998-72854017 None:intergenic 45.0%
CCACTTCATCAACGTAAGAG+TGG - chr2.2:72853366-72853385 MS.gene047153:CDS 45.0%
CCTAGATGAAAGCCAAGATC+AGG + chr2.2:72853508-72853527 None:intergenic 45.0%
CGAAACTGTGGACTCATCTA+TGG - chr2.2:72853326-72853345 MS.gene047153:CDS 45.0%
GTTGCAACTGCTTCTTTGGT+GGG + chr2.2:72853295-72853314 None:intergenic 45.0%
GTTGTACCCAACACACTATG+AGG - chr2.2:72853999-72854018 MS.gene047153:CDS 45.0%
TGTTGCAACTGCTTCTTTGG+TGG + chr2.2:72853296-72853315 None:intergenic 45.0%
! AAGATGCTGACTGGCAAGTT+GGG + chr2.2:72853634-72853653 None:intergenic 45.0%
! CAAGCGTTTTGTCGAAACTG+TGG - chr2.2:72853314-72853333 MS.gene047153:CDS 45.0%
! CCACTCTTACGTTGATGAAG+TGG + chr2.2:72853369-72853388 None:intergenic 45.0%
! CCTGATCTTGGCTTTCATCT+AGG - chr2.2:72853505-72853524 MS.gene047153:CDS 45.0%
! GCTTGTTGCAACTGCTTCTT+TGG + chr2.2:72853299-72853318 None:intergenic 45.0%
CAAAAGAGAGAATGCGGCAG+AGG + chr2.2:72853270-72853289 None:intergenic 50.0%
GAGACTTACAAGGGTTGTGC+AGG + chr2.2:72853659-72853678 None:intergenic 50.0%
GGTTGGATGCCCTATTCTTG+AGG - chr2.2:72853801-72853820 MS.gene047153:CDS 50.0%
! GAAGATGCTGACTGGCAAGT+TGG + chr2.2:72853635-72853654 None:intergenic 50.0%
!! CTCAACCTTGCTGTTCAACG+CGG - chr2.2:72853550-72853569 MS.gene047153:CDS 50.0%
AGCGTCTCGAGAGGCCAAAA+CGG + chr2.2:72853434-72853453 None:intergenic 55.0%
ATGCGGCAGAGGATATCGTC+AGG + chr2.2:72853259-72853278 None:intergenic 55.0%
GTCTACCGCGTTGAACAGCA+AGG + chr2.2:72853558-72853577 None:intergenic 55.0%
GTGCAGGTGAAGATGCTGAC+TGG + chr2.2:72853643-72853662 None:intergenic 55.0%
TTCAACAGCGGCAGTAGCAG+CGG - chr2.2:72853207-72853226 MS.gene047153:CDS 55.0%
! CTGGCAAGTTGGGTAGGCAT+TGG + chr2.2:72853624-72853643 None:intergenic 55.0%
! TGCTGACTGGCAAGTTGGGT+AGG + chr2.2:72853630-72853649 None:intergenic 55.0%
AGAGCCAGCAGCGTCTCGAG+AGG + chr2.2:72853443-72853462 None:intergenic 65.0%
TTGGCCTCTCGAGACGCTGC+TGG - chr2.2:72853436-72853455 MS.gene047153:CDS 65.0%
GGCAGTAGCAGCGGCGCAGA+TGG - chr2.2:72853216-72853235 MS.gene047153:CDS 70.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 72853190 72854038 72853190 ID=MS.gene047153
chr2.2 mRNA 72853190 72854038 72853190 ID=MS.gene047153.t1;Parent=MS.gene047153
chr2.2 exon 72853190 72854038 72853190 ID=MS.gene047153.t1.exon1;Parent=MS.gene047153.t1
chr2.2 CDS 72853190 72854038 72853190 ID=cds.MS.gene047153.t1;Parent=MS.gene047153.t1
Gene Sequence

>MS.gene047153

ATGCGGCAATCGGAAAATTCAACAGCGGCAGTAGCAGCGGCGCAGATGGATACGATCAGCAGTTTACCTGACGATATCCTCTGCCGCATTCTCTCTTTTGTTCCCACCAAAGAAGCAGTTGCAACAAGCGTTTTGTCGAAACTGTGGACTCATCTATGGCACTATGTTCCCAATCTCCACTTCATCAACGTAAGAGTGGATAGTCCTGAATCAAGTCTCCGTTTTAACAAGTTTGTAGACTCCGTTTTGGCCTCTCGAGACGCTGCTGGCTCTAATTTCATCGACGATTTCCACTTCTATATTCAATACGTTAACCCTGATCTTGGCTTTCATCTAGGGTTTCCCAATTTCAACGAATGGCTCAACCTTGCTGTTCAACGCGGTAGACTCAAGTATCTTCATCTCAATCTTTGTGTCTTTCATGGTTATTACCAATGCCTACCCAACTTGCCAGTCAGCATCTTCACCTGCACAACCCTTGTAAGTCTCAACCTCAGTAACTACTGTGTGAATGGCTTTTCTTTTCCTATTGGATTTAGATTTCCATCACTCAAAACCCTTCATTTGGATCTCATTCAATTCTCAGAACTTCGAGATTTTTTGTTGTTTCTGGTTGGATGCCCTATTCTTGAGGATCTACTATTGTGTGATATATACTTCAGTGGCGAGGAAGATTTTCTTACCCTTCAAGAGCTTAAAAACTTAGACTTACCCAAATTGACAAGAGCGTATATAAATCAATGCTCATGCTCCTATTTTATGTGGAAAGCATTTTCTACATCAGTGTCTCTCCGCATAGATAAATCCACGTTGTACCCAACACACTATGAGGTTAGTCTGATTGAATAG

Protein sequence

>MS.gene047153.t1

MRQSENSTAAVAAAQMDTISSLPDDILCRILSFVPTKEAVATSVLSKLWTHLWHYVPNLHFINVRVDSPESSLRFNKFVDSVLASRDAAGSNFIDDFHFYIQYVNPDLGFHLGFPNFNEWLNLAVQRGRLKYLHLNLCVFHGYYQCLPNLPVSIFTCTTLVSLNLSNYCVNGFSFPIGFRFPSLKTLHLDLIQFSELRDFLLFLVGCPILEDLLLCDIYFSGEEDFLTLQELKNLDLPKLTRAYINQCSCSYFMWKAFSTSVSLRIDKSTLYPTHYEVSLIE