Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07658.t1 | XP_013455881.1 | 93.4 | 437 | 29 | 0 | 1 | 437 | 1 | 437 | 6.00E-214 | 753.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07658.t1 | Q3EAE5 | 27.4 | 457 | 244 | 18 | 9 | 439 | 2 | 396 | 2.8e-18 | 94.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07658.t1 | A0A072UJS8 | 93.4 | 437 | 29 | 0 | 1 | 437 | 1 | 437 | 4.3e-214 | 753.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07658.t1 | MTR_4g056070 | 95.195 | 437 | 21 | 0 | 1 | 437 | 1 | 437 | 0.0 | 845 |
MS.gene07658.t1 | MTR_4g055990 | 75.100 | 502 | 79 | 3 | 1 | 459 | 1 | 499 | 0.0 | 726 |
MS.gene07658.t1 | MTR_4g055990 | 81.532 | 444 | 74 | 2 | 1 | 439 | 1 | 441 | 0.0 | 716 |
MS.gene07658.t1 | MTR_4g056040 | 79.130 | 460 | 85 | 4 | 1 | 459 | 1 | 450 | 0.0 | 715 |
MS.gene07658.t1 | MTR_4g055580 | 74.749 | 499 | 83 | 4 | 1 | 461 | 92 | 585 | 0.0 | 709 |
MS.gene07658.t1 | MTR_4g056020 | 71.026 | 497 | 66 | 2 | 1 | 459 | 1 | 457 | 0.0 | 679 |
MS.gene07658.t1 | MTR_4g056030 | 68.432 | 491 | 77 | 2 | 1 | 453 | 1 | 451 | 0.0 | 644 |
MS.gene07658.t1 | MTR_1g038710 | 62.217 | 442 | 127 | 4 | 1 | 439 | 11 | 415 | 5.20e-175 | 498 |
MS.gene07658.t1 | MTR_1g090883 | 56.234 | 393 | 128 | 6 | 2 | 392 | 12 | 362 | 7.74e-131 | 383 |
MS.gene07658.t1 | MTR_7g110920 | 56.563 | 320 | 85 | 3 | 139 | 439 | 1 | 285 | 9.04e-109 | 325 |
MS.gene07658.t1 | MTR_4g093690 | 50.000 | 312 | 107 | 8 | 1 | 308 | 10 | 276 | 7.11e-75 | 236 |
MS.gene07658.t1 | MTR_4g056020 | 65.217 | 161 | 18 | 1 | 337 | 459 | 1 | 161 | 2.66e-62 | 200 |
MS.gene07658.t1 | MTR_4g056010 | 95.000 | 100 | 5 | 0 | 108 | 207 | 1 | 100 | 8.28e-61 | 194 |
MS.gene07658.t1 | MTR_1g090900 | 52.055 | 219 | 62 | 5 | 1 | 216 | 1 | 179 | 3.13e-53 | 177 |
MS.gene07658.t1 | MTR_5g084070 | 29.345 | 443 | 236 | 15 | 5 | 439 | 9 | 382 | 8.24e-26 | 109 |
MS.gene07658.t1 | MTR_7g115270 | 27.416 | 445 | 218 | 17 | 9 | 443 | 12 | 361 | 1.45e-23 | 102 |
MS.gene07658.t1 | MTR_8g062270 | 28.604 | 444 | 257 | 17 | 9 | 439 | 16 | 412 | 1.93e-23 | 102 |
MS.gene07658.t1 | MTR_8g445780 | 27.438 | 441 | 247 | 13 | 7 | 436 | 11 | 389 | 2.55e-23 | 101 |
MS.gene07658.t1 | MTR_8g014260 | 28.194 | 454 | 246 | 16 | 6 | 439 | 13 | 406 | 3.27e-23 | 102 |
MS.gene07658.t1 | MTR_5g080710 | 28.571 | 441 | 240 | 14 | 9 | 439 | 33 | 408 | 5.50e-23 | 101 |
MS.gene07658.t1 | MTR_3g108560 | 28.412 | 447 | 196 | 18 | 6 | 443 | 17 | 348 | 2.29e-22 | 99.0 |
MS.gene07658.t1 | MTR_8g467800 | 28.540 | 459 | 251 | 17 | 5 | 444 | 16 | 416 | 2.83e-21 | 96.3 |
MS.gene07658.t1 | MTR_8g058970 | 26.739 | 460 | 280 | 15 | 4 | 444 | 14 | 435 | 3.29e-21 | 96.3 |
MS.gene07658.t1 | MTR_7g056433 | 25.446 | 448 | 220 | 18 | 4 | 443 | 7 | 348 | 2.45e-20 | 92.8 |
MS.gene07658.t1 | MTR_8g468840 | 26.522 | 460 | 256 | 18 | 8 | 444 | 13 | 413 | 1.68e-19 | 90.9 |
MS.gene07658.t1 | MTR_8g468810 | 27.033 | 455 | 255 | 18 | 4 | 439 | 20 | 416 | 2.33e-19 | 90.9 |
MS.gene07658.t1 | MTR_1g041245 | 32.314 | 229 | 109 | 7 | 9 | 236 | 11 | 194 | 6.87e-19 | 88.6 |
MS.gene07658.t1 | MTR_1g090890 | 71.698 | 53 | 12 | 1 | 390 | 439 | 29 | 81 | 9.77e-19 | 82.0 |
MS.gene07658.t1 | MTR_5g008950 | 25.390 | 449 | 196 | 17 | 11 | 443 | 1 | 326 | 1.12e-18 | 87.8 |
MS.gene07658.t1 | MTR_2g083840 | 28.664 | 464 | 234 | 22 | 9 | 444 | 21 | 415 | 4.25e-18 | 86.7 |
MS.gene07658.t1 | MTR_5g007410 | 24.829 | 439 | 225 | 18 | 11 | 443 | 28 | 367 | 3.72e-16 | 80.9 |
MS.gene07658.t1 | MTR_8g468810 | 27.844 | 334 | 186 | 13 | 4 | 328 | 20 | 307 | 5.02e-15 | 76.3 |
MS.gene07658.t1 | MTR_8g468810 | 27.679 | 336 | 188 | 13 | 4 | 330 | 20 | 309 | 7.11e-15 | 76.3 |
MS.gene07658.t1 | MTR_8g468810 | 27.679 | 336 | 188 | 13 | 4 | 330 | 20 | 309 | 7.42e-15 | 75.9 |
MS.gene07658.t1 | MTR_8g468810 | 27.297 | 370 | 210 | 15 | 4 | 360 | 20 | 343 | 8.36e-15 | 76.3 |
MS.gene07658.t1 | MTR_8g058965 | 27.039 | 466 | 254 | 19 | 9 | 447 | 13 | 419 | 8.37e-14 | 73.6 |
MS.gene07658.t1 | MTR_8g467800 | 29.191 | 346 | 175 | 12 | 5 | 334 | 16 | 307 | 1.70e-13 | 72.0 |
MS.gene07658.t1 | MTR_3g108560 | 28.426 | 394 | 156 | 17 | 6 | 387 | 17 | 296 | 1.97e-13 | 71.2 |
MS.gene07658.t1 | MTR_2g007400 | 25.229 | 436 | 215 | 17 | 9 | 427 | 12 | 353 | 3.54e-13 | 71.2 |
MS.gene07658.t1 | MTR_5g092960 | 26.767 | 467 | 259 | 21 | 5 | 444 | 15 | 425 | 4.48e-12 | 68.2 |
MS.gene07658.t1 | MTR_4g080773 | 27.716 | 451 | 259 | 21 | 9 | 439 | 19 | 422 | 5.72e-12 | 68.2 |
MS.gene07658.t1 | MTR_4g080773 | 27.716 | 451 | 259 | 21 | 9 | 439 | 19 | 422 | 6.57e-12 | 67.8 |
MS.gene07658.t1 | MTR_8g017280 | 27.160 | 324 | 168 | 12 | 8 | 317 | 35 | 304 | 1.81e-11 | 66.2 |
MS.gene07658.t1 | MTR_8g017280 | 27.483 | 302 | 159 | 11 | 4 | 299 | 31 | 278 | 2.28e-11 | 65.1 |
MS.gene07658.t1 | MTR_3g023630 | 24.601 | 439 | 218 | 17 | 9 | 443 | 8 | 337 | 2.33e-11 | 65.5 |
MS.gene07658.t1 | MTR_5g073370 | 24.222 | 450 | 239 | 17 | 6 | 455 | 2 | 349 | 3.60e-11 | 65.1 |
MS.gene07658.t1 | MTR_7g110910 | 81.579 | 38 | 7 | 0 | 1 | 38 | 158 | 195 | 7.28e-11 | 62.0 |
MS.gene07658.t1 | MTR_7g098510 | 30.837 | 227 | 108 | 8 | 9 | 233 | 18 | 197 | 9.30e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07658.t1 | AT4G00315 | 28.942 | 463 | 237 | 20 | 9 | 443 | 2 | 400 | 8.25e-26 | 109 |
MS.gene07658.t1 | AT4G14103 | 27.845 | 413 | 217 | 14 | 9 | 396 | 8 | 364 | 5.93e-24 | 103 |
MS.gene07658.t1 | AT4G14103 | 27.845 | 413 | 217 | 14 | 9 | 396 | 8 | 364 | 5.93e-24 | 103 |
MS.gene07658.t1 | AT4G14103 | 28.180 | 401 | 207 | 14 | 9 | 384 | 8 | 352 | 1.98e-23 | 102 |
MS.gene07658.t1 | AT5G41830 | 25.670 | 522 | 254 | 18 | 3 | 457 | 7 | 461 | 3.27e-23 | 102 |
MS.gene07658.t1 | AT5G38396 | 29.238 | 407 | 210 | 16 | 9 | 387 | 2 | 358 | 5.62e-23 | 101 |
MS.gene07658.t1 | AT1G51370 | 29.581 | 453 | 230 | 16 | 7 | 443 | 17 | 396 | 7.01e-23 | 100 |
MS.gene07658.t1 | AT3G59160 | 25.629 | 437 | 236 | 14 | 9 | 400 | 13 | 405 | 1.29e-22 | 100 |
MS.gene07658.t1 | AT1G55660 | 27.293 | 458 | 251 | 19 | 9 | 443 | 53 | 451 | 1.33e-22 | 100 |
MS.gene07658.t1 | AT3G59190 | 27.612 | 402 | 219 | 10 | 9 | 384 | 12 | 367 | 2.86e-22 | 98.6 |
MS.gene07658.t1 | AT3G50710 | 27.253 | 455 | 240 | 14 | 9 | 443 | 2 | 385 | 5.15e-22 | 98.6 |
MS.gene07658.t1 | AT4G00320 | 26.995 | 426 | 239 | 12 | 3 | 401 | 7 | 387 | 7.45e-22 | 98.6 |
MS.gene07658.t1 | AT3G59190 | 27.612 | 402 | 219 | 10 | 9 | 384 | 12 | 367 | 8.53e-22 | 98.6 |
MS.gene07658.t1 | AT4G26340 | 25.843 | 445 | 253 | 14 | 9 | 443 | 2 | 379 | 1.18e-21 | 97.4 |
MS.gene07658.t1 | AT4G14096 | 27.160 | 405 | 215 | 14 | 8 | 391 | 7 | 352 | 4.86e-21 | 95.9 |
MS.gene07658.t1 | AT4G14096 | 27.160 | 405 | 215 | 14 | 8 | 391 | 7 | 352 | 4.86e-21 | 95.9 |
MS.gene07658.t1 | AT4G10400 | 26.697 | 442 | 244 | 15 | 9 | 443 | 2 | 370 | 5.40e-21 | 95.1 |
MS.gene07658.t1 | AT4G10400 | 26.697 | 442 | 244 | 15 | 9 | 443 | 2 | 370 | 5.40e-21 | 95.1 |
MS.gene07658.t1 | AT4G10400 | 26.697 | 442 | 244 | 15 | 9 | 443 | 2 | 370 | 5.40e-21 | 95.1 |
MS.gene07658.t1 | AT2G26860 | 26.984 | 441 | 254 | 13 | 9 | 439 | 2 | 384 | 7.17e-21 | 94.7 |
MS.gene07658.t1 | AT2G26860 | 26.984 | 441 | 254 | 13 | 9 | 439 | 2 | 384 | 7.17e-21 | 94.7 |
MS.gene07658.t1 | AT5G41840 | 27.778 | 414 | 218 | 13 | 9 | 385 | 14 | 383 | 1.02e-20 | 95.5 |
MS.gene07658.t1 | AT1G58310 | 27.426 | 474 | 247 | 18 | 9 | 432 | 8 | 434 | 1.63e-20 | 94.4 |
MS.gene07658.t1 | AT5G56400 | 28.000 | 450 | 239 | 20 | 9 | 443 | 33 | 412 | 2.38e-20 | 93.6 |
MS.gene07658.t1 | AT1G51370 | 29.330 | 433 | 218 | 15 | 7 | 424 | 17 | 376 | 4.88e-20 | 92.4 |
MS.gene07658.t1 | AT5G56440 | 26.609 | 466 | 262 | 15 | 9 | 458 | 2 | 403 | 6.42e-20 | 92.0 |
MS.gene07658.t1 | AT5G56380 | 25.664 | 452 | 255 | 12 | 9 | 439 | 2 | 393 | 8.42e-20 | 92.0 |
MS.gene07658.t1 | AT5G56380 | 25.664 | 452 | 255 | 12 | 9 | 439 | 2 | 393 | 8.42e-20 | 92.0 |
MS.gene07658.t1 | AT4G13960 | 27.047 | 403 | 217 | 11 | 9 | 387 | 2 | 351 | 9.93e-20 | 92.0 |
MS.gene07658.t1 | AT4G13960 | 27.047 | 403 | 217 | 11 | 9 | 387 | 2 | 351 | 9.93e-20 | 92.0 |
MS.gene07658.t1 | AT3G59170 | 27.146 | 431 | 252 | 16 | 9 | 406 | 7 | 408 | 1.38e-19 | 91.7 |
MS.gene07658.t1 | AT3G03030 | 27.027 | 407 | 220 | 11 | 9 | 385 | 2 | 361 | 2.35e-19 | 90.9 |
MS.gene07658.t1 | AT5G53840 | 28.228 | 457 | 234 | 19 | 7 | 443 | 16 | 398 | 1.11e-18 | 88.6 |
MS.gene07658.t1 | AT3G59210 | 27.079 | 469 | 266 | 14 | 5 | 449 | 3 | 419 | 1.60e-18 | 88.2 |
MS.gene07658.t1 | AT3G59210 | 27.079 | 469 | 266 | 14 | 5 | 449 | 3 | 419 | 1.60e-18 | 88.2 |
MS.gene07658.t1 | AT3G59210 | 27.079 | 469 | 266 | 14 | 5 | 449 | 3 | 419 | 1.60e-18 | 88.2 |
MS.gene07658.t1 | AT3G59210 | 27.079 | 469 | 266 | 14 | 5 | 449 | 3 | 419 | 1.60e-18 | 88.2 |
MS.gene07658.t1 | AT3G59210 | 27.079 | 469 | 266 | 14 | 5 | 449 | 3 | 419 | 1.60e-18 | 88.2 |
MS.gene07658.t1 | AT1G06630 | 29.231 | 390 | 218 | 16 | 8 | 387 | 11 | 352 | 3.59e-18 | 86.3 |
MS.gene07658.t1 | AT1G06630 | 29.231 | 390 | 218 | 16 | 8 | 387 | 11 | 352 | 3.59e-18 | 86.3 |
MS.gene07658.t1 | AT3G58920 | 27.725 | 422 | 221 | 16 | 9 | 395 | 2 | 374 | 4.05e-18 | 87.0 |
MS.gene07658.t1 | AT1G06630 | 29.231 | 390 | 218 | 16 | 8 | 387 | 11 | 352 | 5.41e-18 | 86.3 |
MS.gene07658.t1 | AT1G06630 | 29.231 | 390 | 218 | 16 | 8 | 387 | 11 | 352 | 5.41e-18 | 86.3 |
MS.gene07658.t1 | AT1G06630 | 29.231 | 390 | 218 | 16 | 8 | 387 | 11 | 352 | 5.41e-18 | 86.3 |
MS.gene07658.t1 | AT1G06630 | 29.231 | 390 | 218 | 16 | 8 | 387 | 11 | 352 | 5.41e-18 | 86.3 |
MS.gene07658.t1 | AT4G26350 | 24.062 | 453 | 260 | 14 | 9 | 443 | 2 | 388 | 5.64e-18 | 86.3 |
MS.gene07658.t1 | AT1G06630 | 29.231 | 390 | 218 | 16 | 8 | 387 | 20 | 361 | 5.86e-18 | 86.3 |
MS.gene07658.t1 | AT1G06630 | 29.231 | 390 | 218 | 16 | 8 | 387 | 11 | 352 | 7.45e-18 | 86.3 |
MS.gene07658.t1 | AT1G32375 | 26.009 | 446 | 246 | 17 | 9 | 439 | 2 | 378 | 8.45e-18 | 85.9 |
MS.gene07658.t1 | AT1G32375 | 26.009 | 446 | 246 | 17 | 9 | 439 | 2 | 378 | 8.45e-18 | 85.9 |
MS.gene07658.t1 | AT1G69630 | 27.543 | 403 | 224 | 14 | 2 | 387 | 11 | 362 | 1.37e-17 | 85.5 |
MS.gene07658.t1 | AT5G38590 | 25.901 | 444 | 250 | 16 | 9 | 443 | 2 | 375 | 1.57e-17 | 84.7 |
MS.gene07658.t1 | AT2G42720 | 28.125 | 416 | 192 | 18 | 9 | 387 | 2 | 347 | 4.37e-17 | 83.6 |
MS.gene07658.t1 | AT1G55660 | 27.666 | 347 | 179 | 14 | 9 | 334 | 53 | 348 | 5.54e-17 | 82.8 |
MS.gene07658.t1 | AT3G52680 | 26.991 | 452 | 240 | 13 | 9 | 443 | 21 | 399 | 6.37e-17 | 83.2 |
MS.gene07658.t1 | AT1G51370 | 29.517 | 393 | 189 | 15 | 7 | 384 | 17 | 336 | 7.12e-17 | 82.0 |
MS.gene07658.t1 | AT3G62430 | 27.363 | 402 | 208 | 16 | 9 | 387 | 2 | 342 | 7.93e-17 | 82.8 |
MS.gene07658.t1 | AT4G22280 | 27.913 | 412 | 220 | 12 | 9 | 406 | 2 | 350 | 1.05e-16 | 82.4 |
MS.gene07658.t1 | AT3G59200 | 25.828 | 453 | 231 | 18 | 8 | 419 | 6 | 394 | 1.15e-16 | 82.8 |
MS.gene07658.t1 | AT3G03030 | 27.654 | 358 | 186 | 10 | 9 | 336 | 2 | 316 | 2.69e-16 | 80.5 |
MS.gene07658.t1 | AT5G56410 | 27.093 | 454 | 263 | 21 | 9 | 445 | 2 | 404 | 3.00e-16 | 81.3 |
MS.gene07658.t1 | AT1G52650 | 26.961 | 408 | 212 | 15 | 9 | 387 | 2 | 352 | 3.20e-16 | 81.3 |
MS.gene07658.t1 | AT1G78760 | 26.949 | 449 | 232 | 19 | 7 | 427 | 14 | 394 | 5.17e-16 | 80.5 |
MS.gene07658.t1 | AT3G58860 | 26.343 | 391 | 223 | 12 | 6 | 384 | 4 | 341 | 5.67e-16 | 80.5 |
MS.gene07658.t1 | AT4G22280 | 28.753 | 393 | 203 | 13 | 9 | 387 | 2 | 331 | 1.13e-15 | 78.6 |
MS.gene07658.t1 | AT3G59180 | 26.515 | 396 | 220 | 14 | 104 | 456 | 33 | 400 | 1.26e-15 | 79.3 |
MS.gene07658.t1 | AT4G13965 | 27.964 | 447 | 237 | 18 | 9 | 443 | 10 | 383 | 1.45e-15 | 79.0 |
MS.gene07658.t1 | AT2G26030 | 25.431 | 464 | 257 | 19 | 9 | 444 | 4 | 406 | 2.47e-15 | 78.2 |
MS.gene07658.t1 | AT5G38392 | 32.787 | 244 | 106 | 10 | 9 | 239 | 2 | 200 | 4.59e-15 | 74.7 |
MS.gene07658.t1 | AT5G56370 | 26.697 | 442 | 238 | 18 | 9 | 439 | 2 | 368 | 5.19e-15 | 77.4 |
MS.gene07658.t1 | AT5G56370 | 26.697 | 442 | 238 | 18 | 9 | 439 | 2 | 368 | 5.19e-15 | 77.4 |
MS.gene07658.t1 | AT3G26930 | 27.111 | 450 | 234 | 18 | 8 | 439 | 20 | 393 | 5.90e-15 | 77.4 |
MS.gene07658.t1 | AT4G15060 | 26.022 | 465 | 231 | 19 | 6 | 435 | 23 | 409 | 7.48e-15 | 76.6 |
MS.gene07658.t1 | AT2G26030 | 25.325 | 462 | 255 | 19 | 9 | 444 | 4 | 401 | 8.60e-15 | 76.6 |
MS.gene07658.t1 | AT2G26030 | 25.325 | 462 | 255 | 19 | 9 | 444 | 4 | 401 | 8.60e-15 | 76.6 |
MS.gene07658.t1 | AT5G56690 | 28.507 | 442 | 230 | 23 | 11 | 432 | 4 | 379 | 1.75e-14 | 75.5 |
MS.gene07658.t1 | AT2G29930 | 27.384 | 409 | 195 | 19 | 9 | 387 | 12 | 348 | 4.01e-14 | 74.7 |
MS.gene07658.t1 | AT2G29930 | 27.384 | 409 | 195 | 19 | 9 | 387 | 12 | 348 | 4.01e-14 | 74.7 |
MS.gene07658.t1 | AT3G26930 | 28.859 | 298 | 165 | 13 | 159 | 439 | 81 | 348 | 6.52e-14 | 73.9 |
MS.gene07658.t1 | AT3G49030 | 25.926 | 432 | 240 | 16 | 7 | 427 | 19 | 381 | 6.66e-14 | 73.9 |
MS.gene07658.t1 | AT2G42730 | 26.872 | 454 | 255 | 18 | 9 | 438 | 5 | 405 | 9.05e-14 | 73.6 |
MS.gene07658.t1 | AT1G78750 | 26.303 | 422 | 237 | 14 | 2 | 401 | 11 | 380 | 9.50e-14 | 73.6 |
MS.gene07658.t1 | AT1G78750 | 26.303 | 422 | 237 | 14 | 2 | 401 | 11 | 380 | 9.50e-14 | 73.6 |
MS.gene07658.t1 | AT3G59250 | 26.765 | 340 | 204 | 12 | 124 | 445 | 57 | 369 | 1.30e-13 | 72.8 |
MS.gene07658.t1 | AT1G66310 | 26.456 | 412 | 230 | 17 | 4 | 399 | 14 | 368 | 1.47e-13 | 72.8 |
MS.gene07658.t1 | AT4G13985 | 26.434 | 401 | 238 | 13 | 4 | 390 | 14 | 371 | 1.51e-13 | 72.8 |
MS.gene07658.t1 | AT1G06630 | 29.762 | 336 | 179 | 15 | 9 | 334 | 12 | 300 | 2.52e-13 | 70.9 |
MS.gene07658.t1 | AT1G13780 | 25.612 | 449 | 276 | 16 | 9 | 443 | 10 | 414 | 2.66e-13 | 72.0 |
MS.gene07658.t1 | AT5G53635 | 27.533 | 454 | 215 | 24 | 11 | 425 | 2 | 380 | 3.25e-13 | 71.6 |
MS.gene07658.t1 | AT5G25860 | 26.515 | 396 | 233 | 14 | 9 | 387 | 12 | 366 | 3.27e-13 | 71.6 |
MS.gene07658.t1 | AT3G44060 | 27.764 | 407 | 216 | 21 | 14 | 400 | 4 | 352 | 4.71e-13 | 71.2 |
MS.gene07658.t1 | AT5G56700 | 30.088 | 339 | 194 | 17 | 115 | 439 | 29 | 338 | 5.72e-13 | 70.5 |
MS.gene07658.t1 | AT1G05080 | 27.473 | 455 | 245 | 18 | 8 | 443 | 12 | 400 | 1.64e-12 | 69.7 |
MS.gene07658.t1 | AT5G18770 | 25.330 | 454 | 263 | 15 | 9 | 443 | 24 | 420 | 4.75e-12 | 68.2 |
MS.gene07658.t1 | AT3G59150 | 28.532 | 361 | 172 | 16 | 9 | 338 | 13 | 318 | 6.38e-12 | 67.8 |
MS.gene07658.t1 | AT5G56820 | 26.836 | 354 | 192 | 13 | 120 | 444 | 66 | 381 | 7.09e-12 | 67.8 |
MS.gene07658.t1 | AT5G60610 | 29.375 | 320 | 183 | 14 | 135 | 439 | 83 | 374 | 1.16e-11 | 66.6 |
MS.gene07658.t1 | AT5G60610 | 29.375 | 320 | 183 | 14 | 135 | 439 | 83 | 374 | 1.16e-11 | 66.6 |
MS.gene07658.t1 | AT2G29930 | 33.061 | 245 | 110 | 15 | 166 | 387 | 15 | 228 | 1.27e-11 | 66.2 |
MS.gene07658.t1 | AT3G60040 | 24.764 | 424 | 272 | 11 | 9 | 428 | 232 | 612 | 1.59e-11 | 67.0 |
MS.gene07658.t1 | AT3G60040 | 24.764 | 424 | 272 | 11 | 9 | 428 | 230 | 610 | 1.61e-11 | 67.0 |
MS.gene07658.t1 | AT1G55030 | 25.000 | 440 | 258 | 19 | 9 | 443 | 9 | 381 | 2.09e-11 | 66.2 |
MS.gene07658.t1 | AT1G55030 | 25.000 | 440 | 258 | 19 | 9 | 443 | 19 | 391 | 2.19e-11 | 66.2 |
MS.gene07658.t1 | AT3G60040 | 24.764 | 424 | 272 | 11 | 9 | 428 | 13 | 393 | 4.01e-11 | 65.9 |
MS.gene07658.t1 | AT5G35995 | 24.500 | 400 | 222 | 15 | 8 | 387 | 4 | 343 | 4.35e-11 | 65.1 |
MS.gene07658.t1 | AT5G35995 | 24.500 | 400 | 222 | 15 | 8 | 387 | 4 | 343 | 4.35e-11 | 65.1 |
MS.gene07658.t1 | AT3G60040 | 24.764 | 424 | 272 | 11 | 9 | 428 | 233 | 613 | 5.49e-11 | 65.5 |
MS.gene07658.t1 | AT3G60040 | 24.764 | 424 | 272 | 11 | 9 | 428 | 232 | 612 | 5.58e-11 | 65.5 |
Find 91 sgRNAs with CRISPR-Local
Find 133 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTGCAAACTCATACTTTCT+AGG | 0.189881 | 4.1:-42348137 | None:intergenic |
CTCGTTACATTTGAATTTAA+AGG | 0.204847 | 4.1:+42348939 | MS.gene07658:CDS |
ACATGTTCTATAACACTCTT+TGG | 0.268393 | 4.1:-42347358 | None:intergenic |
ACTGCAAGATCCTTAAGTTT+TGG | 0.282824 | 4.1:-42348505 | None:intergenic |
TCACAGTTTGTTATATTTAT+CGG | 0.293701 | 4.1:+42348426 | MS.gene07658:CDS |
TATAACACTCTTTGGTTGAT+AGG | 0.294346 | 4.1:-42347350 | None:intergenic |
GCAGACTGACTCCCATCTTT+TGG | 0.296189 | 4.1:-42347388 | None:intergenic |
AGTTTCCAACCTCCTTTCTT+CGG | 0.314970 | 4.1:-42348869 | None:intergenic |
TAATTCAATTGAAGATCATT+TGG | 0.321337 | 4.1:+42349457 | MS.gene07658:CDS |
GCTTTCCATTTGTAAACTTC+CGG | 0.329876 | 4.1:+42348184 | MS.gene07658:CDS |
ACTTAAGGATCTTGCAGTTA+AGG | 0.333977 | 4.1:+42348510 | MS.gene07658:CDS |
GTTTCCAACCTCCTTTCTTC+GGG | 0.346723 | 4.1:-42348868 | None:intergenic |
TCTATCTGGTTGTCCTCGTC+TGG | 0.383558 | 4.1:+42347944 | MS.gene07658:CDS |
TGTGATGTATTCTATCTTTG+AGG | 0.387279 | 4.1:+42347893 | MS.gene07658:CDS |
CGAAAGCAAGCTGTAAAGAT+AGG | 0.388871 | 4.1:-42347479 | None:intergenic |
ACAAATCCAGGTCAAGTTCC+TGG | 0.406926 | 4.1:-42347722 | None:intergenic |
ACTCGTGGTCTTAAAATTGC+GGG | 0.408358 | 4.1:+42347794 | MS.gene07658:CDS |
ACTTTCTAATGTCAAATCAT+TGG | 0.410912 | 4.1:+42348238 | MS.gene07658:CDS |
AAGTAGGCATAAATAAATAA+AGG | 0.417351 | 4.1:-42348037 | None:intergenic |
AAAGTGAAGGTTGGGAATCT+TGG | 0.417455 | 4.1:-42347412 | None:intergenic |
GCAGAATGCTCCAAAACTTA+AGG | 0.417940 | 4.1:+42348495 | MS.gene07658:CDS |
GGTAATTGAAAGTGAAGGTT+GGG | 0.443422 | 4.1:-42347420 | None:intergenic |
TAGAATACATCACAGTTTCA+TGG | 0.447817 | 4.1:-42347884 | None:intergenic |
AAGCCTAGCTCGATCAAGAT+TGG | 0.452512 | 4.1:-42348165 | None:intergenic |
TAGAAAGAACTTCGAGTGAC+GGG | 0.453462 | 4.1:-42348094 | None:intergenic |
ATTTCTTCTTTCGATATCAC+AGG | 0.458999 | 4.1:-42347456 | None:intergenic |
AGATCATTTGGATGCCTTCA+AGG | 0.459425 | 4.1:+42349469 | MS.gene07658:CDS |
CTAACGTTTGATAGTGAGAA+AGG | 0.464525 | 4.1:+42347528 | MS.gene07658:CDS |
CATGTGTTCTATCCAAAAGA+TGG | 0.467948 | 4.1:+42347376 | MS.gene07658:CDS |
AAAATCCGGAAGTTTACAAA+TGG | 0.471972 | 4.1:-42348189 | None:intergenic |
TTTCATGCAGAAACAAATCC+AGG | 0.472087 | 4.1:-42347734 | None:intergenic |
CATCAAGTGGCTGGTATGGC+TGG | 0.480337 | 4.1:-42347554 | None:intergenic |
TCAAATCAATTCCCGAAGAA+AGG | 0.482837 | 4.1:+42348857 | MS.gene07658:CDS |
GGTCTTCACTGAATCCTTGA+AGG | 0.484784 | 4.1:-42349483 | None:intergenic |
AAATTCAAATGTAACGAGAC+TGG | 0.485332 | 4.1:-42348934 | None:intergenic |
GTATACAAATTGTTAAAATC+CGG | 0.494166 | 4.1:-42348203 | None:intergenic |
CAAGGTCCAGGAACTTGACC+TGG | 0.494419 | 4.1:+42347716 | MS.gene07658:CDS |
GGCATTAGATCTCAAGGTCC+AGG | 0.496808 | 4.1:+42347704 | MS.gene07658:CDS |
ATCACAGGGTCTGAAATCTC+TGG | 0.502995 | 4.1:-42347441 | None:intergenic |
TGTACACATGTGGGTTTCAA+AGG | 0.503354 | 4.1:+42347575 | MS.gene07658:CDS |
GGAGGTTGGAAACTCGAGTT+GGG | 0.509671 | 4.1:+42348878 | MS.gene07658:CDS |
GTGACTCACACGTGGAAAGC+CGG | 0.517166 | 4.1:-42347773 | None:intergenic |
TGTACATCAAGTGGCTGGTA+TGG | 0.523834 | 4.1:-42347558 | None:intergenic |
CAACACATAATAACAGAAGT+AGG | 0.536563 | 4.1:-42348053 | None:intergenic |
CACTCGTGGTCTTAAAATTG+CGG | 0.539007 | 4.1:+42347793 | MS.gene07658:CDS |
TGTCCAATCTTGATCGAGCT+AGG | 0.540794 | 4.1:+42348162 | MS.gene07658:CDS |
TTCAAAGGCATTAGATCTCA+AGG | 0.542872 | 4.1:+42347698 | MS.gene07658:CDS |
TGGTAATTGAAAGTGAAGGT+TGG | 0.551378 | 4.1:-42347421 | None:intergenic |
TTAACAATTTGTATACACTC+TGG | 0.552358 | 4.1:+42348210 | MS.gene07658:CDS |
AATGTCAAATCATTGGCTCT+CGG | 0.552626 | 4.1:+42348245 | MS.gene07658:CDS |
CCGAAAATATAAGAAAACTT+AGG | 0.553012 | 4.1:+42347628 | MS.gene07658:CDS |
TGTTATGCAGTTTCTCAGCA+TGG | 0.553413 | 4.1:+42348369 | MS.gene07658:intron |
TAAGTGAAAAGAGATGTTGA+TGG | 0.554261 | 4.1:-42348000 | None:intergenic |
AGCCACATGATGTGCACATG+TGG | 0.563390 | 4.1:+42347673 | MS.gene07658:CDS |
ATGTGTTCTATCCAAAAGAT+GGG | 0.563690 | 4.1:+42347377 | MS.gene07658:CDS |
GACGGGGCATTAATTTGTAG+TGG | 0.566180 | 4.1:-42348077 | None:intergenic |
TCAAGACATAGAAACTGAGT+TGG | 0.567178 | 4.1:+42348965 | MS.gene07658:CDS |
CTTAGGCTTCATAGTGACAA+AGG | 0.569497 | 4.1:+42347645 | MS.gene07658:CDS |
AGGAGGTTGGAAACTCGAGT+TGG | 0.571978 | 4.1:+42348877 | MS.gene07658:CDS |
AAGTGAAAAGAGATGTTGAT+GGG | 0.577961 | 4.1:-42347999 | None:intergenic |
ATCTGGTTGTCCTCGTCTGG+AGG | 0.578131 | 4.1:+42347947 | MS.gene07658:CDS |
CGGTAAATATACATGAAAAG+AGG | 0.581610 | 4.1:-42347841 | None:intergenic |
TGTGCACATGTGGGTTTCAA+AGG | 0.585269 | 4.1:+42347683 | MS.gene07658:CDS |
GGTGGAGCCATCAGTGACTC+CGG | 0.588696 | 4.1:+42348899 | MS.gene07658:CDS |
AATTCCCGAAGAAAGGAGGT+TGG | 0.591474 | 4.1:+42348864 | MS.gene07658:CDS |
AAATATCTGAGAGTTGCAGT+TGG | 0.597797 | 4.1:+42348452 | MS.gene07658:CDS |
AATTTGTATACACTCTGGAA+AGG | 0.599787 | 4.1:+42348215 | MS.gene07658:CDS |
AGACTGGTTGTAAGACATGC+CGG | 0.603083 | 4.1:-42348918 | None:intergenic |
GATGTTGATGGGTATTCGAA+AGG | 0.603601 | 4.1:-42347988 | None:intergenic |
AATCAATTCCCGAAGAAAGG+AGG | 0.603702 | 4.1:+42348860 | MS.gene07658:CDS |
ATAGAAAGAACTTCGAGTGA+CGG | 0.607597 | 4.1:-42348095 | None:intergenic |
AGACATGCCGGAGTCACTGA+TGG | 0.608044 | 4.1:-42348906 | None:intergenic |
ACATGTGTACATCAAGTGGC+TGG | 0.611487 | 4.1:-42347563 | None:intergenic |
GCCACTTGATGTACACATGT+GGG | 0.611613 | 4.1:+42347566 | MS.gene07658:CDS |
TGAAAAGAGGAATTGAGTGT+TGG | 0.612345 | 4.1:-42347828 | None:intergenic |
TTTCTTCTTTCGATATCACA+GGG | 0.620763 | 4.1:-42347455 | None:intergenic |
GGTTGGAAACTCGAGTTGGG+TGG | 0.621687 | 4.1:+42348881 | MS.gene07658:CDS |
AGCCACTTGATGTACACATG+TGG | 0.625709 | 4.1:+42347565 | MS.gene07658:CDS |
ACCCACATGTGTACATCAAG+TGG | 0.629333 | 4.1:-42347567 | None:intergenic |
TTCCACGTGTGAGTCACTCG+TGG | 0.631019 | 4.1:+42347779 | MS.gene07658:CDS |
AAAAGAAGTTCCTCCAGACG+AGG | 0.636459 | 4.1:-42347957 | None:intergenic |
ACCCACATGTGCACATCATG+TGG | 0.642533 | 4.1:-42347675 | None:intergenic |
AGATGAAGAATCTTTAGTGA+CGG | 0.666233 | 4.1:-42347861 | None:intergenic |
GCCACATGATGTGCACATGT+GGG | 0.673788 | 4.1:+42347674 | MS.gene07658:CDS |
CTCGTGGTCTTAAAATTGCG+GGG | 0.673910 | 4.1:+42347795 | MS.gene07658:CDS |
AGAAAGAACTTCGAGTGACG+GGG | 0.677033 | 4.1:-42348093 | None:intergenic |
TCACACGTGGAAAGCCGGAG+CGG | 0.680905 | 4.1:-42347768 | None:intergenic |
GACCACGAGTGACTCACACG+TGG | 0.682798 | 4.1:-42347781 | None:intergenic |
TCTCTGGTAATTGAAAGTGA+AGG | 0.696256 | 4.1:-42347425 | None:intergenic |
ACTAGATTAAAAGTGTCGAG+TGG | 0.699429 | 4.1:-42349504 | None:intergenic |
TATGCAGTTTCTCAGCATGG+AGG | 0.703511 | 4.1:+42348372 | MS.gene07658:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATAAAATAGTTTAAAAGA+AGG | - | chr4.1:42348735-42348754 | None:intergenic | 10.0% |
!!! | AAAATTCTAATGATAATTTT+TGG | + | chr4.1:42348815-42348834 | MS.gene07658:intron | 10.0% |
!!! | GAATTAATTAATTTGTTTAT+CGG | - | chr4.1:42348661-42348680 | None:intergenic | 10.0% |
!!! | TATTTTTTAATGAAAAAAGT+TGG | + | chr4.1:42349168-42349187 | MS.gene07658:intron | 10.0% |
!! | AAATATAATAATCTCAAATC+TGG | + | chr4.1:42348584-42348603 | MS.gene07658:intron | 15.0% |
!! | TAAAGTATATAAACTTTGTA+TGG | - | chr4.1:42349150-42349169 | None:intergenic | 15.0% |
!! | TGATATATTGTAAATAGTTT+CGG | - | chr4.1:42348790-42348809 | None:intergenic | 15.0% |
!!! | TCTAATGATTTTATCATTTA+TGG | + | chr4.1:42349391-42349410 | MS.gene07658:intron | 15.0% |
!! | AAGTAGGCATAAATAAATAA+AGG | - | chr4.1:42348040-42348059 | None:intergenic | 20.0% |
!! | GTATACAAATTGTTAAAATC+CGG | - | chr4.1:42348206-42348225 | None:intergenic | 20.0% |
!! | TAAAAGAAGGTTAAATTGAT+AGG | - | chr4.1:42348722-42348741 | None:intergenic | 20.0% |
!! | TAATTCAATTGAAGATCATT+TGG | + | chr4.1:42349457-42349476 | MS.gene07658:CDS | 20.0% |
!!! | AATTATTCAATATTTGCTAC+AGG | + | chr4.1:42349430-42349449 | MS.gene07658:intron | 20.0% |
!!! | CCTAAGTTTTCTTATATTTT+CGG | - | chr4.1:42347631-42347650 | None:intergenic | 20.0% |
!!! | TCACAGTTTGTTATATTTAT+CGG | + | chr4.1:42348426-42348445 | MS.gene07658:CDS | 20.0% |
! | ACTTTCTAATGTCAAATCAT+TGG | + | chr4.1:42348238-42348257 | MS.gene07658:CDS | 25.0% |
! | CCGAAAATATAAGAAAACTT+AGG | + | chr4.1:42347628-42347647 | MS.gene07658:CDS | 25.0% |
! | CTCGTTACATTTGAATTTAA+AGG | + | chr4.1:42348939-42348958 | MS.gene07658:CDS | 25.0% |
! | TGTATATACTATTACATTCG+TGG | + | chr4.1:42349300-42349319 | MS.gene07658:intron | 25.0% |
! | TTAACAATTTGTATACACTC+TGG | + | chr4.1:42348210-42348229 | MS.gene07658:CDS | 25.0% |
!! | ACTCTTCTTTTCTTTAAACT+GGG | - | chr4.1:42349050-42349069 | None:intergenic | 25.0% |
!! | TACTCTTCTTTTCTTTAAAC+TGG | - | chr4.1:42349051-42349070 | None:intergenic | 25.0% |
AAAATCCGGAAGTTTACAAA+TGG | - | chr4.1:42348192-42348211 | None:intergenic | 30.0% | |
AAATTCAAATGTAACGAGAC+TGG | - | chr4.1:42348937-42348956 | None:intergenic | 30.0% | |
AAGACTAAGCAAAAGATACA+TGG | + | chr4.1:42348620-42348639 | MS.gene07658:intron | 30.0% | |
AAGTGAAAAGAGATGTTGAT+GGG | - | chr4.1:42348002-42348021 | None:intergenic | 30.0% | |
AATGAGAATAGAATTGCATC+TGG | - | chr4.1:42348340-42348359 | None:intergenic | 30.0% | |
ACATGTTCTATAACACTCTT+TGG | - | chr4.1:42347361-42347380 | None:intergenic | 30.0% | |
AGATGAAGAATCTTTAGTGA+CGG | - | chr4.1:42347864-42347883 | None:intergenic | 30.0% | |
ATACTATTACATTCGTGGTT+GGG | + | chr4.1:42349305-42349324 | MS.gene07658:intron | 30.0% | |
ATGAGAATAGAATTGCATCT+GGG | - | chr4.1:42348339-42348358 | None:intergenic | 30.0% | |
ATGTGTTCTATCCAAAAGAT+GGG | + | chr4.1:42347377-42347396 | MS.gene07658:CDS | 30.0% | |
ATTTCTTCTTTCGATATCAC+AGG | - | chr4.1:42347459-42347478 | None:intergenic | 30.0% | |
CAACACATAATAACAGAAGT+AGG | - | chr4.1:42348056-42348075 | None:intergenic | 30.0% | |
CAAGAGATATAAAGTTGTGT+CGG | - | chr4.1:42349276-42349295 | None:intergenic | 30.0% | |
CGGTAAATATACATGAAAAG+AGG | - | chr4.1:42347844-42347863 | None:intergenic | 30.0% | |
GTTGGCATGTTAATATTTGT+TGG | + | chr4.1:42349186-42349205 | MS.gene07658:intron | 30.0% | |
TAAGTGAAAAGAGATGTTGA+TGG | - | chr4.1:42348003-42348022 | None:intergenic | 30.0% | |
TAGAATACATCACAGTTTCA+TGG | - | chr4.1:42347887-42347906 | None:intergenic | 30.0% | |
TATAACACTCTTTGGTTGAT+AGG | - | chr4.1:42347353-42347372 | None:intergenic | 30.0% | |
TATACTATTACATTCGTGGT+TGG | + | chr4.1:42349304-42349323 | MS.gene07658:intron | 30.0% | |
TGTGATGTATTCTATCTTTG+AGG | + | chr4.1:42347893-42347912 | MS.gene07658:CDS | 30.0% | |
TTTCTTCTTTCGATATCACA+GGG | - | chr4.1:42347458-42347477 | None:intergenic | 30.0% | |
! | AATGTCTAGAACAATAAGAG+AGG | - | chr4.1:42349245-42349264 | None:intergenic | 30.0% |
! | AATTTGTATACACTCTGGAA+AGG | + | chr4.1:42348215-42348234 | MS.gene07658:CDS | 30.0% |
! | ATTTGTTGGTATGATGTTGT+GGG | + | chr4.1:42349200-42349219 | MS.gene07658:intron | 30.0% |
! | GATCTCAATACTTTTCTATC+TGG | + | chr4.1:42347930-42347949 | MS.gene07658:CDS | 30.0% |
! | TATTTGTTGGTATGATGTTG+TGG | + | chr4.1:42349199-42349218 | MS.gene07658:intron | 30.0% |
AAAAAATCTTATTGCCGCTC+CGG | + | chr4.1:42347754-42347773 | MS.gene07658:CDS | 35.0% | |
AAATATCTGAGAGTTGCAGT+TGG | + | chr4.1:42348452-42348471 | MS.gene07658:CDS | 35.0% | |
ACTTAAGGATCTTGCAGTTA+AGG | + | chr4.1:42348510-42348529 | MS.gene07658:CDS | 35.0% | |
AGTAGAAAAAAGTTTGCGCA+AGG | + | chr4.1:42349067-42349086 | MS.gene07658:intron | 35.0% | |
ATAGAAAGAACTTCGAGTGA+CGG | - | chr4.1:42348098-42348117 | None:intergenic | 35.0% | |
CATGTGTTCTATCCAAAAGA+TGG | + | chr4.1:42347376-42347395 | MS.gene07658:CDS | 35.0% | |
CTTGCAAACTCATACTTTCT+AGG | - | chr4.1:42348140-42348159 | None:intergenic | 35.0% | |
GCTTTCCATTTGTAAACTTC+CGG | + | chr4.1:42348184-42348203 | MS.gene07658:CDS | 35.0% | |
GGTAATTGAAAGTGAAGGTT+GGG | - | chr4.1:42347423-42347442 | None:intergenic | 35.0% | |
GTAGAAAAAAGTTTGCGCAA+GGG | + | chr4.1:42349068-42349087 | MS.gene07658:intron | 35.0% | |
TAGAAAAAAGTTTGCGCAAG+GGG | + | chr4.1:42349069-42349088 | MS.gene07658:intron | 35.0% | |
TCAAATCAATTCCCGAAGAA+AGG | + | chr4.1:42348857-42348876 | MS.gene07658:CDS | 35.0% | |
TCAAGACATAGAAACTGAGT+TGG | + | chr4.1:42348965-42348984 | MS.gene07658:CDS | 35.0% | |
TCACTCAAGTAAGTTAGAGA+AGG | + | chr4.1:42349010-42349029 | MS.gene07658:intron | 35.0% | |
TCTCTGGTAATTGAAAGTGA+AGG | - | chr4.1:42347428-42347447 | None:intergenic | 35.0% | |
TGAAAAGAGGAATTGAGTGT+TGG | - | chr4.1:42347831-42347850 | None:intergenic | 35.0% | |
TGGTAATTGAAAGTGAAGGT+TGG | - | chr4.1:42347424-42347443 | None:intergenic | 35.0% | |
TGTAAACTTCATACCCATAC+TGG | - | chr4.1:42349113-42349132 | None:intergenic | 35.0% | |
TTTCATGCAGAAACAAATCC+AGG | - | chr4.1:42347737-42347756 | None:intergenic | 35.0% | |
TTTGTTGGTATGATGTTGTG+GGG | + | chr4.1:42349201-42349220 | MS.gene07658:intron | 35.0% | |
! | ACTGCAAGATCCTTAAGTTT+TGG | - | chr4.1:42348508-42348527 | None:intergenic | 35.0% |
! | AGATATAAAGTTGTGTCGGT+CGG | - | chr4.1:42349272-42349291 | None:intergenic | 35.0% |
!! | AATGTCAAATCATTGGCTCT+CGG | + | chr4.1:42348245-42348264 | MS.gene07658:CDS | 35.0% |
!! | CTAACGTTTGATAGTGAGAA+AGG | + | chr4.1:42347528-42347547 | MS.gene07658:CDS | 35.0% |
!! | TTATATTTTCGGTGCGTCTT+AGG | - | chr4.1:42347620-42347639 | None:intergenic | 35.0% |
!! | TTCAAAGGCATTAGATCTCA+AGG | + | chr4.1:42347698-42347717 | MS.gene07658:CDS | 35.0% |
AAAGTGAAGGTTGGGAATCT+TGG | - | chr4.1:42347415-42347434 | None:intergenic | 40.0% | |
AATCAATTCCCGAAGAAAGG+AGG | + | chr4.1:42348860-42348879 | MS.gene07658:CDS | 40.0% | |
ACTTCATACCCATACTGGTA+CGG | - | chr4.1:42349108-42349127 | None:intergenic | 40.0% | |
AGATCATTTGGATGCCTTCA+AGG | + | chr4.1:42349469-42349488 | MS.gene07658:CDS | 40.0% | |
AGTTTCCAACCTCCTTTCTT+CGG | - | chr4.1:42348872-42348891 | None:intergenic | 40.0% | |
CGAAAGCAAGCTGTAAAGAT+AGG | - | chr4.1:42347482-42347501 | None:intergenic | 40.0% | |
CTTAGGCTTCATAGTGACAA+AGG | + | chr4.1:42347645-42347664 | MS.gene07658:CDS | 40.0% | |
GCAGAATGCTCCAAAACTTA+AGG | + | chr4.1:42348495-42348514 | MS.gene07658:CDS | 40.0% | |
TAGAAAGAACTTCGAGTGAC+GGG | - | chr4.1:42348097-42348116 | None:intergenic | 40.0% | |
TGCATCTGGGTGACTAAATA+TGG | - | chr4.1:42348326-42348345 | None:intergenic | 40.0% | |
TGTACACATGTGGGTTTCAA+AGG | + | chr4.1:42347575-42347594 | MS.gene07658:CDS | 40.0% | |
TGTTATGCAGTTTCTCAGCA+TGG | + | chr4.1:42348369-42348388 | MS.gene07658:intron | 40.0% | |
! | ACTCGTGGTCTTAAAATTGC+GGG | + | chr4.1:42347794-42347813 | MS.gene07658:CDS | 40.0% |
! | CACTCGTGGTCTTAAAATTG+CGG | + | chr4.1:42347793-42347812 | MS.gene07658:CDS | 40.0% |
! | GATGTTGATGGGTATTCGAA+AGG | - | chr4.1:42347991-42348010 | None:intergenic | 40.0% |
AAAAGAAGTTCCTCCAGACG+AGG | - | chr4.1:42347960-42347979 | None:intergenic | 45.0% | |
AAGCCTAGCTCGATCAAGAT+TGG | - | chr4.1:42348168-42348187 | None:intergenic | 45.0% | |
AATTCCCGAAGAAAGGAGGT+TGG | + | chr4.1:42348864-42348883 | MS.gene07658:CDS | 45.0% | |
ACAAATCCAGGTCAAGTTCC+TGG | - | chr4.1:42347725-42347744 | None:intergenic | 45.0% | |
ACATGTGTACATCAAGTGGC+TGG | - | chr4.1:42347566-42347585 | None:intergenic | 45.0% | |
ACCCACATGTGTACATCAAG+TGG | - | chr4.1:42347570-42347589 | None:intergenic | 45.0% | |
AGAAAGAACTTCGAGTGACG+GGG | - | chr4.1:42348096-42348115 | None:intergenic | 45.0% | |
AGAAATCCTCCGTACCAGTA+TGG | + | chr4.1:42349096-42349115 | MS.gene07658:intron | 45.0% | |
AGCCACTTGATGTACACATG+TGG | + | chr4.1:42347565-42347584 | MS.gene07658:CDS | 45.0% | |
GAAATCCTCCGTACCAGTAT+GGG | + | chr4.1:42349097-42349116 | MS.gene07658:intron | 45.0% | |
GCCACTTGATGTACACATGT+GGG | + | chr4.1:42347566-42347585 | MS.gene07658:CDS | 45.0% | |
GGTCTTCACTGAATCCTTGA+AGG | - | chr4.1:42349486-42349505 | None:intergenic | 45.0% | |
GTTTCCAACCTCCTTTCTTC+GGG | - | chr4.1:42348871-42348890 | None:intergenic | 45.0% | |
TATGCAGTTTCTCAGCATGG+AGG | + | chr4.1:42348372-42348391 | MS.gene07658:intron | 45.0% | |
TGTACATCAAGTGGCTGGTA+TGG | - | chr4.1:42347561-42347580 | None:intergenic | 45.0% | |
TGTCCAATCTTGATCGAGCT+AGG | + | chr4.1:42348162-42348181 | MS.gene07658:CDS | 45.0% | |
TGTGCACATGTGGGTTTCAA+AGG | + | chr4.1:42347683-42347702 | MS.gene07658:CDS | 45.0% | |
TTGGTATGATGTTGTGGGGT+GGG | + | chr4.1:42349205-42349224 | MS.gene07658:intron | 45.0% | |
! | AGACTGGTTGTAAGACATGC+CGG | - | chr4.1:42348921-42348940 | None:intergenic | 45.0% |
! | ATCACAGGGTCTGAAATCTC+TGG | - | chr4.1:42347444-42347463 | None:intergenic | 45.0% |
! | CTCGTGGTCTTAAAATTGCG+GGG | + | chr4.1:42347795-42347814 | MS.gene07658:CDS | 45.0% |
!! | GACGGGGCATTAATTTGTAG+TGG | - | chr4.1:42348080-42348099 | None:intergenic | 45.0% |
!!! | AATATTGAATAATTAATTTT+TGG | - | chr4.1:42349424-42349443 | None:intergenic | 5.0% |
ACCCACATGTGCACATCATG+TGG | - | chr4.1:42347678-42347697 | None:intergenic | 50.0% | |
AGCCACATGATGTGCACATG+TGG | + | chr4.1:42347673-42347692 | MS.gene07658:CDS | 50.0% | |
AGGAGGTTGGAAACTCGAGT+TGG | + | chr4.1:42348877-42348896 | MS.gene07658:CDS | 50.0% | |
GCCACATGATGTGCACATGT+GGG | + | chr4.1:42347674-42347693 | MS.gene07658:CDS | 50.0% | |
GGAGGTTGGAAACTCGAGTT+GGG | + | chr4.1:42348878-42348897 | MS.gene07658:CDS | 50.0% | |
GGCATTAGATCTCAAGGTCC+AGG | + | chr4.1:42347704-42347723 | MS.gene07658:CDS | 50.0% | |
GTTGGTATGATGTTGTGGGG+TGG | + | chr4.1:42349204-42349223 | MS.gene07658:intron | 50.0% | |
TCATACCCATACTGGTACGG+AGG | - | chr4.1:42349105-42349124 | None:intergenic | 50.0% | |
TCTATCTGGTTGTCCTCGTC+TGG | + | chr4.1:42347944-42347963 | MS.gene07658:CDS | 50.0% | |
TGGTATGATGTTGTGGGGTG+GGG | + | chr4.1:42349206-42349225 | MS.gene07658:intron | 50.0% | |
!! | GCAGACTGACTCCCATCTTT+TGG | - | chr4.1:42347391-42347410 | None:intergenic | 50.0% |
AGACATGCCGGAGTCACTGA+TGG | - | chr4.1:42348909-42348928 | None:intergenic | 55.0% | |
ATCTGGTTGTCCTCGTCTGG+AGG | + | chr4.1:42347947-42347966 | MS.gene07658:CDS | 55.0% | |
CAAGGTCCAGGAACTTGACC+TGG | + | chr4.1:42347716-42347735 | MS.gene07658:CDS | 55.0% | |
CATCAAGTGGCTGGTATGGC+TGG | - | chr4.1:42347557-42347576 | None:intergenic | 55.0% | |
GTGACTCACACGTGGAAAGC+CGG | - | chr4.1:42347776-42347795 | None:intergenic | 55.0% | |
TTCCACGTGTGAGTCACTCG+TGG | + | chr4.1:42347779-42347798 | MS.gene07658:CDS | 55.0% | |
!! | GGTTGGAAACTCGAGTTGGG+TGG | + | chr4.1:42348881-42348900 | MS.gene07658:CDS | 55.0% |
GACCACGAGTGACTCACACG+TGG | - | chr4.1:42347784-42347803 | None:intergenic | 60.0% | |
GGTGGAGCCATCAGTGACTC+CGG | + | chr4.1:42348899-42348918 | MS.gene07658:CDS | 60.0% | |
TCACACGTGGAAAGCCGGAG+CGG | - | chr4.1:42347771-42347790 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 42347276 | 42349520 | 42347276 | ID=MS.gene07658 |
chr4.1 | mRNA | 42347276 | 42349520 | 42347276 | ID=MS.gene07658.t1;Parent=MS.gene07658 |
chr4.1 | exon | 42347276 | 42348283 | 42347276 | ID=MS.gene07658.t1.exon1;Parent=MS.gene07658.t1 |
chr4.1 | CDS | 42347276 | 42348283 | 42347276 | ID=cds.MS.gene07658.t1;Parent=MS.gene07658.t1 |
chr4.1 | exon | 42348379 | 42348531 | 42348379 | ID=MS.gene07658.t1.exon2;Parent=MS.gene07658.t1 |
chr4.1 | CDS | 42348379 | 42348531 | 42348379 | ID=cds.MS.gene07658.t1;Parent=MS.gene07658.t1 |
chr4.1 | exon | 42348849 | 42349004 | 42348849 | ID=MS.gene07658.t1.exon3;Parent=MS.gene07658.t1 |
chr4.1 | CDS | 42348849 | 42349004 | 42348849 | ID=cds.MS.gene07658.t1;Parent=MS.gene07658.t1 |
chr4.1 | exon | 42349452 | 42349520 | 42349452 | ID=MS.gene07658.t1.exon4;Parent=MS.gene07658.t1 |
chr4.1 | CDS | 42349452 | 42349520 | 42349452 | ID=cds.MS.gene07658.t1;Parent=MS.gene07658.t1 |
Gene Sequence |
Protein sequence |