Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09370.t1 | XP_024638552.1 | 89.4 | 501 | 45 | 3 | 1 | 493 | 1 | 501 | 1.90E-229 | 805.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09370.t1 | Q3EAE5 | 26.9 | 475 | 265 | 16 | 9 | 456 | 2 | 421 | 1.9e-20 | 102.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09370.t1 | A0A072UVN2 | 89.4 | 501 | 45 | 3 | 1 | 493 | 1 | 501 | 1.3e-229 | 805.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09370.t1 | MTR_4g055990 | 88.423 | 501 | 50 | 3 | 1 | 493 | 1 | 501 | 0.0 | 877 |
MS.gene09370.t1 | MTR_4g055990 | 88.518 | 479 | 47 | 3 | 1 | 471 | 1 | 479 | 0.0 | 840 |
MS.gene09370.t1 | MTR_4g055580 | 84.929 | 491 | 72 | 1 | 1 | 489 | 92 | 582 | 0.0 | 827 |
MS.gene09370.t1 | MTR_4g056020 | 83.806 | 494 | 44 | 3 | 1 | 493 | 1 | 459 | 0.0 | 815 |
MS.gene09370.t1 | MTR_4g056040 | 80.085 | 472 | 88 | 3 | 1 | 471 | 1 | 467 | 0.0 | 752 |
MS.gene09370.t1 | MTR_4g056030 | 78.423 | 482 | 68 | 3 | 1 | 481 | 1 | 447 | 0.0 | 741 |
MS.gene09370.t1 | MTR_4g056070 | 82.151 | 437 | 72 | 3 | 1 | 431 | 1 | 437 | 0.0 | 709 |
MS.gene09370.t1 | MTR_1g038710 | 63.711 | 485 | 128 | 7 | 1 | 476 | 11 | 456 | 0.0 | 556 |
MS.gene09370.t1 | MTR_1g090883 | 56.250 | 384 | 124 | 7 | 2 | 380 | 12 | 356 | 1.75e-129 | 381 |
MS.gene09370.t1 | MTR_7g110920 | 56.704 | 358 | 97 | 5 | 134 | 471 | 1 | 320 | 6.38e-124 | 365 |
MS.gene09370.t1 | MTR_4g056020 | 90.798 | 163 | 15 | 0 | 331 | 493 | 1 | 163 | 2.05e-101 | 301 |
MS.gene09370.t1 | MTR_4g093690 | 51.140 | 307 | 105 | 8 | 1 | 302 | 10 | 276 | 1.67e-78 | 246 |
MS.gene09370.t1 | MTR_4g056010 | 93.000 | 100 | 7 | 0 | 103 | 202 | 1 | 100 | 1.58e-58 | 188 |
MS.gene09370.t1 | MTR_1g090900 | 51.869 | 214 | 61 | 5 | 1 | 209 | 1 | 177 | 2.30e-52 | 176 |
MS.gene09370.t1 | MTR_1g090890 | 62.637 | 91 | 28 | 2 | 384 | 471 | 29 | 116 | 1.36e-29 | 112 |
MS.gene09370.t1 | MTR_5g084070 | 28.041 | 485 | 269 | 17 | 5 | 473 | 9 | 429 | 9.88e-29 | 118 |
MS.gene09370.t1 | MTR_5g080710 | 28.097 | 452 | 248 | 15 | 9 | 446 | 33 | 421 | 1.17e-26 | 112 |
MS.gene09370.t1 | MTR_8g014260 | 27.778 | 468 | 252 | 15 | 6 | 447 | 13 | 420 | 2.27e-25 | 108 |
MS.gene09370.t1 | MTR_4g032730 | 28.243 | 478 | 246 | 22 | 9 | 445 | 15 | 436 | 2.92e-24 | 105 |
MS.gene09370.t1 | MTR_7g056433 | 26.526 | 475 | 239 | 19 | 4 | 467 | 7 | 382 | 3.91e-24 | 104 |
MS.gene09370.t1 | MTR_8g445780 | 27.477 | 444 | 237 | 15 | 7 | 430 | 11 | 389 | 4.19e-22 | 98.6 |
MS.gene09370.t1 | MTR_8g062270 | 27.333 | 450 | 273 | 17 | 9 | 445 | 16 | 424 | 8.76e-22 | 98.2 |
MS.gene09370.t1 | MTR_7g115270 | 25.727 | 447 | 233 | 14 | 9 | 445 | 12 | 369 | 2.05e-20 | 93.6 |
MS.gene09370.t1 | MTR_8g467800 | 27.394 | 449 | 255 | 15 | 5 | 434 | 16 | 412 | 3.62e-20 | 93.6 |
MS.gene09370.t1 | MTR_8g468810 | 26.840 | 462 | 265 | 17 | 4 | 445 | 20 | 428 | 8.95e-20 | 92.4 |
MS.gene09370.t1 | MTR_2g007400 | 25.051 | 487 | 249 | 20 | 9 | 474 | 12 | 403 | 2.05e-19 | 90.5 |
MS.gene09370.t1 | MTR_8g058970 | 25.662 | 491 | 300 | 17 | 4 | 468 | 14 | 465 | 2.45e-19 | 90.9 |
MS.gene09370.t1 | MTR_8g468840 | 25.934 | 455 | 273 | 16 | 8 | 445 | 13 | 420 | 4.82e-18 | 87.0 |
MS.gene09370.t1 | MTR_7g098570 | 26.457 | 446 | 214 | 16 | 9 | 445 | 20 | 360 | 9.38e-18 | 86.3 |
MS.gene09370.t1 | MTR_2g083840 | 27.660 | 470 | 239 | 19 | 9 | 445 | 21 | 422 | 1.36e-17 | 85.5 |
MS.gene09370.t1 | MTR_8g014160 | 26.813 | 455 | 223 | 18 | 4 | 445 | 36 | 393 | 2.66e-17 | 84.3 |
MS.gene09370.t1 | MTR_5g007410 | 25.566 | 442 | 228 | 20 | 11 | 445 | 28 | 375 | 7.74e-17 | 83.2 |
MS.gene09370.t1 | MTR_3g109982 | 25.620 | 484 | 259 | 16 | 9 | 445 | 13 | 442 | 2.41e-16 | 82.4 |
MS.gene09370.t1 | MTR_1g041245 | 30.317 | 221 | 113 | 6 | 9 | 228 | 11 | 191 | 4.06e-16 | 80.5 |
MS.gene09370.t1 | MTR_4g080773 | 27.155 | 464 | 263 | 19 | 9 | 445 | 19 | 434 | 4.10e-15 | 78.2 |
MS.gene09370.t1 | MTR_4g080773 | 27.155 | 464 | 263 | 19 | 9 | 445 | 19 | 434 | 4.40e-15 | 78.2 |
MS.gene09370.t1 | MTR_8g017280 | 28.521 | 284 | 149 | 12 | 7 | 285 | 34 | 268 | 2.09e-14 | 74.3 |
MS.gene09370.t1 | MTR_8g017280 | 28.723 | 282 | 147 | 12 | 9 | 285 | 36 | 268 | 5.04e-14 | 74.3 |
MS.gene09370.t1 | MTR_8g467800 | 28.235 | 340 | 180 | 11 | 5 | 328 | 16 | 307 | 6.32e-14 | 73.6 |
MS.gene09370.t1 | MTR_4g080787 | 25.806 | 465 | 265 | 19 | 9 | 445 | 19 | 431 | 6.38e-14 | 74.3 |
MS.gene09370.t1 | MTR_5g058100 | 25.210 | 476 | 242 | 19 | 1 | 467 | 1 | 371 | 6.49e-14 | 73.6 |
MS.gene09370.t1 | MTR_8g468810 | 27.596 | 337 | 181 | 13 | 4 | 324 | 20 | 309 | 1.18e-13 | 72.4 |
MS.gene09370.t1 | MTR_8g468810 | 27.596 | 337 | 181 | 13 | 4 | 324 | 20 | 309 | 1.40e-13 | 72.0 |
MS.gene09370.t1 | MTR_1g085120 | 26.432 | 454 | 235 | 21 | 9 | 458 | 92 | 450 | 1.43e-13 | 73.2 |
MS.gene09370.t1 | MTR_8g468810 | 27.596 | 337 | 181 | 13 | 4 | 324 | 20 | 309 | 1.47e-13 | 72.4 |
MS.gene09370.t1 | MTR_3g048290 | 26.293 | 464 | 269 | 17 | 5 | 445 | 19 | 432 | 1.58e-13 | 73.2 |
MS.gene09370.t1 | MTR_1g085120 | 26.432 | 454 | 235 | 21 | 9 | 458 | 167 | 525 | 2.45e-13 | 72.8 |
MS.gene09370.t1 | MTR_8g058965 | 25.690 | 471 | 266 | 19 | 9 | 450 | 13 | 428 | 3.36e-13 | 72.0 |
MS.gene09370.t1 | MTR_6g029350 | 28.507 | 221 | 127 | 9 | 267 | 479 | 6 | 203 | 2.72e-12 | 67.0 |
MS.gene09370.t1 | MTR_3g023630 | 23.490 | 447 | 223 | 16 | 9 | 445 | 8 | 345 | 3.32e-12 | 68.6 |
MS.gene09370.t1 | MTR_5g008950 | 32.075 | 106 | 67 | 2 | 345 | 447 | 233 | 336 | 4.38e-12 | 68.2 |
MS.gene09370.t1 | MTR_3g087260 | 27.500 | 480 | 238 | 20 | 9 | 445 | 12 | 424 | 1.04e-11 | 67.4 |
MS.gene09370.t1 | MTR_1g066830 | 23.778 | 450 | 250 | 18 | 9 | 457 | 8 | 365 | 1.16e-11 | 66.6 |
MS.gene09370.t1 | MTR_7g110910 | 81.579 | 38 | 7 | 0 | 1 | 38 | 158 | 195 | 1.89e-11 | 63.5 |
MS.gene09370.t1 | MTR_5g045170 | 29.730 | 222 | 110 | 8 | 11 | 228 | 16 | 195 | 2.03e-11 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09370.t1 | AT4G10400 | 28.205 | 468 | 260 | 17 | 9 | 467 | 2 | 402 | 4.54e-29 | 119 |
MS.gene09370.t1 | AT4G10400 | 28.205 | 468 | 260 | 17 | 9 | 467 | 2 | 402 | 4.54e-29 | 119 |
MS.gene09370.t1 | AT4G10400 | 28.205 | 468 | 260 | 17 | 9 | 467 | 2 | 402 | 4.54e-29 | 119 |
MS.gene09370.t1 | AT4G00315 | 28.390 | 472 | 262 | 19 | 9 | 456 | 2 | 421 | 1.75e-27 | 115 |
MS.gene09370.t1 | AT4G14103 | 30.467 | 407 | 208 | 16 | 9 | 390 | 8 | 364 | 3.72e-27 | 113 |
MS.gene09370.t1 | AT4G14103 | 30.467 | 407 | 208 | 16 | 9 | 390 | 8 | 364 | 3.72e-27 | 113 |
MS.gene09370.t1 | AT5G62970 | 30.820 | 451 | 262 | 22 | 9 | 445 | 2 | 416 | 4.68e-27 | 114 |
MS.gene09370.t1 | AT4G14103 | 31.017 | 403 | 202 | 17 | 9 | 386 | 8 | 359 | 5.02e-27 | 113 |
MS.gene09370.t1 | AT3G59190 | 29.188 | 394 | 217 | 12 | 9 | 378 | 12 | 367 | 2.07e-26 | 110 |
MS.gene09370.t1 | AT3G59160 | 27.338 | 417 | 248 | 13 | 9 | 394 | 13 | 405 | 4.47e-26 | 111 |
MS.gene09370.t1 | AT3G59190 | 29.188 | 394 | 217 | 12 | 9 | 378 | 12 | 367 | 5.77e-26 | 111 |
MS.gene09370.t1 | AT1G55660 | 28.092 | 477 | 257 | 20 | 9 | 456 | 53 | 472 | 9.72e-26 | 110 |
MS.gene09370.t1 | AT2G26860 | 28.635 | 447 | 257 | 14 | 9 | 445 | 2 | 396 | 3.24e-25 | 107 |
MS.gene09370.t1 | AT2G26860 | 28.635 | 447 | 257 | 14 | 9 | 445 | 2 | 396 | 3.24e-25 | 107 |
MS.gene09370.t1 | AT3G59170 | 29.529 | 403 | 230 | 14 | 9 | 379 | 7 | 387 | 4.07e-25 | 108 |
MS.gene09370.t1 | AT3G59230 | 27.536 | 483 | 262 | 16 | 9 | 450 | 12 | 447 | 1.13e-24 | 107 |
MS.gene09370.t1 | AT4G26340 | 26.829 | 451 | 260 | 16 | 9 | 450 | 2 | 391 | 1.14e-24 | 106 |
MS.gene09370.t1 | AT1G58310 | 29.798 | 396 | 225 | 13 | 9 | 379 | 8 | 375 | 4.96e-24 | 105 |
MS.gene09370.t1 | AT5G56380 | 25.941 | 478 | 270 | 15 | 9 | 461 | 2 | 420 | 7.97e-24 | 104 |
MS.gene09370.t1 | AT5G56380 | 25.941 | 478 | 270 | 15 | 9 | 461 | 2 | 420 | 7.97e-24 | 104 |
MS.gene09370.t1 | AT1G51370 | 29.122 | 467 | 242 | 21 | 7 | 454 | 17 | 413 | 9.71e-24 | 103 |
MS.gene09370.t1 | AT4G14096 | 28.645 | 391 | 207 | 15 | 8 | 378 | 7 | 345 | 1.21e-22 | 100 |
MS.gene09370.t1 | AT4G14096 | 28.645 | 391 | 207 | 15 | 8 | 378 | 7 | 345 | 1.21e-22 | 100 |
MS.gene09370.t1 | AT5G60610 | 27.477 | 444 | 256 | 14 | 9 | 445 | 2 | 386 | 3.11e-22 | 99.0 |
MS.gene09370.t1 | AT5G60610 | 27.477 | 444 | 256 | 14 | 9 | 445 | 2 | 386 | 3.11e-22 | 99.0 |
MS.gene09370.t1 | AT3G50710 | 26.754 | 456 | 243 | 15 | 9 | 441 | 2 | 389 | 3.78e-22 | 99.0 |
MS.gene09370.t1 | AT5G38590 | 26.180 | 466 | 263 | 15 | 9 | 459 | 2 | 401 | 6.51e-22 | 98.2 |
MS.gene09370.t1 | AT4G13965 | 26.898 | 461 | 257 | 21 | 9 | 456 | 10 | 403 | 1.10e-21 | 97.8 |
MS.gene09370.t1 | AT5G38396 | 28.283 | 396 | 220 | 14 | 9 | 380 | 2 | 357 | 1.16e-21 | 98.2 |
MS.gene09370.t1 | AT5G41830 | 25.869 | 518 | 294 | 18 | 3 | 491 | 7 | 463 | 6.17e-21 | 96.3 |
MS.gene09370.t1 | AT4G00320 | 28.266 | 421 | 234 | 15 | 3 | 395 | 7 | 387 | 1.73e-20 | 94.7 |
MS.gene09370.t1 | AT5G56370 | 27.907 | 473 | 259 | 21 | 9 | 469 | 2 | 404 | 2.45e-20 | 93.6 |
MS.gene09370.t1 | AT5G56370 | 27.907 | 473 | 259 | 21 | 9 | 469 | 2 | 404 | 2.45e-20 | 93.6 |
MS.gene09370.t1 | AT3G52680 | 26.754 | 456 | 250 | 13 | 9 | 447 | 21 | 409 | 5.65e-20 | 92.8 |
MS.gene09370.t1 | AT2G04230 | 26.151 | 478 | 294 | 17 | 8 | 475 | 12 | 440 | 6.52e-20 | 92.8 |
MS.gene09370.t1 | AT3G49030 | 26.971 | 482 | 261 | 18 | 7 | 468 | 19 | 429 | 6.79e-20 | 92.4 |
MS.gene09370.t1 | AT1G32375 | 26.850 | 473 | 255 | 19 | 9 | 461 | 2 | 403 | 1.17e-19 | 91.7 |
MS.gene09370.t1 | AT1G32375 | 26.850 | 473 | 255 | 19 | 9 | 461 | 2 | 403 | 1.17e-19 | 91.7 |
MS.gene09370.t1 | AT5G41840 | 26.764 | 411 | 222 | 12 | 9 | 380 | 14 | 384 | 1.37e-19 | 92.0 |
MS.gene09370.t1 | AT5G56400 | 26.940 | 464 | 247 | 21 | 9 | 451 | 33 | 425 | 1.52e-19 | 91.7 |
MS.gene09370.t1 | AT3G03030 | 27.000 | 400 | 225 | 10 | 9 | 380 | 2 | 362 | 1.55e-19 | 91.7 |
MS.gene09370.t1 | AT3G59200 | 26.501 | 483 | 263 | 20 | 8 | 450 | 6 | 436 | 1.85e-19 | 91.7 |
MS.gene09370.t1 | AT1G51370 | 29.535 | 430 | 215 | 20 | 7 | 418 | 17 | 376 | 2.27e-19 | 90.5 |
MS.gene09370.t1 | AT3G62430 | 29.293 | 396 | 200 | 16 | 9 | 380 | 2 | 341 | 2.69e-19 | 90.5 |
MS.gene09370.t1 | AT3G59210 | 29.146 | 398 | 216 | 15 | 5 | 379 | 3 | 357 | 2.73e-19 | 90.9 |
MS.gene09370.t1 | AT3G59210 | 29.146 | 398 | 216 | 15 | 5 | 379 | 3 | 357 | 2.73e-19 | 90.9 |
MS.gene09370.t1 | AT3G59210 | 29.146 | 398 | 216 | 15 | 5 | 379 | 3 | 357 | 2.73e-19 | 90.9 |
MS.gene09370.t1 | AT3G59210 | 29.146 | 398 | 216 | 15 | 5 | 379 | 3 | 357 | 2.73e-19 | 90.9 |
MS.gene09370.t1 | AT3G59210 | 29.146 | 398 | 216 | 15 | 5 | 379 | 3 | 357 | 2.73e-19 | 90.9 |
MS.gene09370.t1 | AT3G58960 | 25.813 | 492 | 257 | 15 | 9 | 447 | 2 | 438 | 5.80e-19 | 90.1 |
MS.gene09370.t1 | AT5G56410 | 28.511 | 470 | 271 | 23 | 9 | 459 | 2 | 425 | 6.78e-19 | 89.7 |
MS.gene09370.t1 | AT4G26350 | 24.348 | 460 | 261 | 16 | 9 | 446 | 2 | 396 | 1.48e-18 | 88.2 |
MS.gene09370.t1 | AT3G58860 | 27.532 | 385 | 224 | 13 | 6 | 380 | 4 | 343 | 2.51e-18 | 87.8 |
MS.gene09370.t1 | AT4G10420 | 27.378 | 347 | 207 | 11 | 134 | 467 | 1 | 315 | 6.62e-18 | 85.1 |
MS.gene09370.t1 | AT2G26030 | 26.609 | 466 | 253 | 21 | 9 | 443 | 4 | 411 | 1.06e-17 | 85.9 |
MS.gene09370.t1 | AT2G26030 | 26.782 | 463 | 251 | 21 | 9 | 443 | 4 | 406 | 1.54e-17 | 85.5 |
MS.gene09370.t1 | AT2G26030 | 26.782 | 463 | 251 | 21 | 9 | 443 | 4 | 406 | 1.54e-17 | 85.5 |
MS.gene09370.t1 | AT1G78760 | 26.763 | 482 | 242 | 21 | 7 | 453 | 14 | 419 | 1.58e-17 | 85.5 |
MS.gene09370.t1 | AT1G55660 | 28.696 | 345 | 172 | 15 | 9 | 328 | 53 | 348 | 2.36e-17 | 84.0 |
MS.gene09370.t1 | AT4G22280 | 28.822 | 399 | 219 | 14 | 9 | 396 | 2 | 346 | 3.06e-17 | 84.3 |
MS.gene09370.t1 | AT3G59200 | 27.206 | 408 | 212 | 17 | 8 | 380 | 6 | 363 | 3.32e-17 | 83.6 |
MS.gene09370.t1 | AT1G51370 | 28.792 | 389 | 197 | 16 | 7 | 381 | 17 | 339 | 1.12e-16 | 81.6 |
MS.gene09370.t1 | AT4G22280 | 29.688 | 384 | 203 | 15 | 9 | 380 | 2 | 330 | 2.49e-16 | 80.5 |
MS.gene09370.t1 | AT3G58920 | 26.471 | 408 | 220 | 14 | 9 | 380 | 2 | 365 | 3.26e-16 | 81.3 |
MS.gene09370.t1 | AT3G58930 | 27.119 | 413 | 214 | 13 | 9 | 380 | 2 | 368 | 3.93e-16 | 81.3 |
MS.gene09370.t1 | AT3G58930 | 27.119 | 413 | 214 | 13 | 9 | 380 | 2 | 368 | 3.93e-16 | 81.3 |
MS.gene09370.t1 | AT3G58930 | 27.119 | 413 | 214 | 13 | 9 | 380 | 2 | 368 | 3.93e-16 | 81.3 |
MS.gene09370.t1 | AT5G56700 | 30.986 | 355 | 197 | 18 | 110 | 447 | 29 | 352 | 4.78e-16 | 80.1 |
MS.gene09370.t1 | AT1G69630 | 27.543 | 403 | 216 | 15 | 2 | 380 | 11 | 361 | 5.50e-16 | 80.5 |
MS.gene09370.t1 | AT2G42730 | 26.681 | 461 | 267 | 18 | 9 | 445 | 5 | 418 | 5.85e-16 | 80.5 |
MS.gene09370.t1 | AT3G58980 | 24.540 | 489 | 281 | 14 | 9 | 470 | 2 | 429 | 8.20e-16 | 80.5 |
MS.gene09370.t1 | AT3G58900 | 27.828 | 442 | 245 | 16 | 9 | 419 | 2 | 400 | 1.04e-15 | 79.7 |
MS.gene09370.t1 | AT3G59180 | 26.913 | 379 | 210 | 16 | 118 | 449 | 60 | 418 | 1.06e-15 | 79.7 |
MS.gene09370.t1 | AT1G78750 | 25.373 | 402 | 233 | 14 | 2 | 380 | 11 | 368 | 1.14e-15 | 79.7 |
MS.gene09370.t1 | AT1G78750 | 25.373 | 402 | 233 | 14 | 2 | 380 | 11 | 368 | 1.14e-15 | 79.7 |
MS.gene09370.t1 | AT5G22670 | 27.074 | 458 | 251 | 19 | 8 | 442 | 10 | 407 | 1.16e-15 | 79.7 |
MS.gene09370.t1 | AT5G53840 | 26.856 | 458 | 249 | 21 | 7 | 445 | 16 | 406 | 1.24e-15 | 79.3 |
MS.gene09370.t1 | AT3G03040 | 25.743 | 404 | 216 | 11 | 9 | 378 | 2 | 355 | 1.46e-15 | 79.3 |
MS.gene09370.t1 | AT3G42770 | 30.030 | 333 | 170 | 14 | 14 | 328 | 4 | 291 | 1.80e-15 | 79.3 |
MS.gene09370.t1 | AT4G09920 | 28.354 | 328 | 180 | 12 | 9 | 329 | 2 | 281 | 1.95e-15 | 77.8 |
MS.gene09370.t1 | AT4G09920 | 28.354 | 328 | 180 | 12 | 9 | 329 | 2 | 281 | 1.95e-15 | 77.8 |
MS.gene09370.t1 | AT2G42720 | 28.358 | 402 | 199 | 18 | 9 | 379 | 2 | 345 | 2.04e-15 | 79.0 |
MS.gene09370.t1 | AT3G44060 | 28.822 | 399 | 216 | 20 | 14 | 394 | 4 | 352 | 2.23e-15 | 78.6 |
MS.gene09370.t1 | AT1G52650 | 25.696 | 467 | 265 | 15 | 9 | 445 | 2 | 416 | 2.48e-15 | 78.6 |
MS.gene09370.t1 | AT5G15620 | 28.676 | 408 | 209 | 19 | 9 | 391 | 2 | 352 | 3.30e-15 | 78.2 |
MS.gene09370.t1 | AT3G26930 | 25.664 | 452 | 252 | 17 | 8 | 443 | 20 | 403 | 3.31e-15 | 78.2 |
MS.gene09370.t1 | AT3G26920 | 26.769 | 325 | 207 | 11 | 126 | 442 | 4 | 305 | 3.39e-15 | 77.4 |
MS.gene09370.t1 | AT3G26920 | 26.769 | 325 | 207 | 11 | 126 | 442 | 4 | 305 | 3.39e-15 | 77.4 |
MS.gene09370.t1 | AT4G13985 | 26.010 | 396 | 232 | 15 | 4 | 380 | 14 | 367 | 4.22e-15 | 77.8 |
MS.gene09370.t1 | AT4G09920 | 28.440 | 327 | 179 | 12 | 9 | 328 | 2 | 280 | 5.38e-15 | 75.9 |
MS.gene09370.t1 | AT4G09920 | 28.440 | 327 | 179 | 12 | 9 | 328 | 2 | 280 | 5.38e-15 | 75.9 |
MS.gene09370.t1 | AT4G09920 | 28.440 | 327 | 179 | 12 | 9 | 328 | 2 | 280 | 5.38e-15 | 75.9 |
MS.gene09370.t1 | AT3G54910 | 26.842 | 380 | 243 | 14 | 102 | 472 | 20 | 373 | 9.43e-15 | 76.3 |
MS.gene09370.t1 | AT3G54910 | 26.842 | 380 | 243 | 14 | 102 | 472 | 20 | 373 | 9.43e-15 | 76.3 |
MS.gene09370.t1 | AT3G54910 | 26.842 | 380 | 243 | 14 | 102 | 472 | 20 | 373 | 9.43e-15 | 76.3 |
MS.gene09370.t1 | AT5G56820 | 23.859 | 482 | 271 | 18 | 9 | 476 | 15 | 414 | 1.02e-14 | 76.6 |
MS.gene09370.t1 | AT3G26930 | 27.961 | 304 | 181 | 11 | 153 | 443 | 80 | 358 | 1.11e-14 | 76.3 |
MS.gene09370.t1 | AT3G59240 | 26.154 | 390 | 225 | 14 | 9 | 380 | 8 | 352 | 1.41e-14 | 76.6 |
MS.gene09370.t1 | AT5G44950 | 23.176 | 466 | 265 | 14 | 9 | 445 | 4 | 405 | 2.61e-14 | 75.5 |
MS.gene09370.t1 | AT5G38590 | 27.246 | 334 | 180 | 12 | 9 | 333 | 2 | 281 | 2.84e-14 | 73.9 |
MS.gene09370.t1 | AT1G66290 | 25.322 | 466 | 256 | 19 | 4 | 445 | 24 | 421 | 4.80e-14 | 74.7 |
MS.gene09370.t1 | AT1G66310 | 25.667 | 487 | 274 | 19 | 4 | 467 | 14 | 435 | 5.00e-14 | 74.3 |
MS.gene09370.t1 | AT5G41630 | 25.393 | 445 | 249 | 14 | 9 | 411 | 12 | 415 | 9.18e-14 | 73.9 |
MS.gene09370.t1 | AT1G05080 | 26.134 | 463 | 251 | 16 | 8 | 445 | 12 | 408 | 1.10e-13 | 73.6 |
MS.gene09370.t1 | AT1G13780 | 24.473 | 474 | 256 | 19 | 9 | 443 | 10 | 420 | 1.54e-13 | 73.2 |
MS.gene09370.t1 | AT2G29930 | 27.569 | 399 | 199 | 21 | 9 | 380 | 12 | 347 | 3.50e-13 | 72.0 |
MS.gene09370.t1 | AT2G29930 | 27.569 | 399 | 199 | 21 | 9 | 380 | 12 | 347 | 3.50e-13 | 72.0 |
MS.gene09370.t1 | AT1G66320 | 26.431 | 367 | 219 | 17 | 103 | 445 | 87 | 426 | 5.62e-13 | 71.2 |
MS.gene09370.t1 | AT3G59150 | 25.793 | 473 | 271 | 18 | 9 | 446 | 13 | 440 | 6.53e-13 | 71.2 |
MS.gene09370.t1 | AT5G25860 | 27.320 | 388 | 232 | 18 | 9 | 380 | 12 | 365 | 1.73e-12 | 69.7 |
MS.gene09370.t1 | AT3G58900 | 28.977 | 352 | 183 | 13 | 9 | 332 | 2 | 314 | 2.12e-12 | 68.6 |
MS.gene09370.t1 | AT3G58900 | 29.213 | 356 | 183 | 14 | 9 | 334 | 2 | 318 | 2.24e-12 | 68.6 |
MS.gene09370.t1 | AT3G58900 | 29.213 | 356 | 183 | 14 | 9 | 334 | 2 | 318 | 2.24e-12 | 68.6 |
MS.gene09370.t1 | AT3G58940 | 26.221 | 389 | 217 | 11 | 9 | 380 | 2 | 337 | 2.56e-12 | 69.7 |
MS.gene09370.t1 | AT3G58940 | 26.221 | 389 | 217 | 11 | 9 | 380 | 2 | 337 | 2.56e-12 | 69.7 |
MS.gene09370.t1 | AT5G56390 | 25.109 | 458 | 259 | 16 | 9 | 447 | 2 | 394 | 3.45e-12 | 68.6 |
MS.gene09370.t1 | AT5G38392 | 33.475 | 236 | 110 | 10 | 9 | 234 | 2 | 200 | 3.55e-12 | 66.2 |
MS.gene09370.t1 | AT5G35995 | 25.000 | 396 | 215 | 15 | 9 | 380 | 5 | 342 | 5.45e-12 | 68.2 |
MS.gene09370.t1 | AT5G35995 | 25.000 | 396 | 215 | 15 | 9 | 380 | 5 | 342 | 5.45e-12 | 68.2 |
MS.gene09370.t1 | AT5G22700 | 23.983 | 467 | 254 | 18 | 9 | 442 | 6 | 404 | 9.52e-12 | 67.4 |
MS.gene09370.t1 | AT5G22700 | 23.983 | 467 | 254 | 18 | 9 | 442 | 6 | 404 | 9.52e-12 | 67.4 |
MS.gene09370.t1 | AT5G22700 | 23.983 | 467 | 254 | 18 | 9 | 442 | 6 | 404 | 9.52e-12 | 67.4 |
MS.gene09370.t1 | AT5G22700 | 23.983 | 467 | 254 | 18 | 9 | 442 | 6 | 404 | 9.52e-12 | 67.4 |
MS.gene09370.t1 | AT5G18770 | 25.198 | 504 | 278 | 20 | 9 | 476 | 24 | 464 | 1.15e-11 | 67.4 |
MS.gene09370.t1 | AT5G22700 | 23.983 | 467 | 254 | 18 | 9 | 442 | 43 | 441 | 1.58e-11 | 67.0 |
MS.gene09370.t1 | AT3G60040 | 26.494 | 385 | 236 | 14 | 9 | 380 | 13 | 363 | 1.85e-11 | 67.0 |
MS.gene09370.t1 | AT3G49030 | 25.104 | 482 | 244 | 20 | 7 | 468 | 19 | 403 | 2.26e-11 | 66.2 |
MS.gene09370.t1 | AT3G60040 | 26.494 | 385 | 236 | 14 | 9 | 380 | 232 | 582 | 2.83e-11 | 66.2 |
MS.gene09370.t1 | AT3G60040 | 26.494 | 385 | 236 | 14 | 9 | 380 | 230 | 580 | 2.85e-11 | 66.2 |
MS.gene09370.t1 | AT3G60040 | 26.494 | 385 | 236 | 14 | 9 | 380 | 233 | 583 | 2.96e-11 | 66.6 |
MS.gene09370.t1 | AT3G60040 | 26.494 | 385 | 236 | 14 | 9 | 380 | 232 | 582 | 3.09e-11 | 66.6 |
MS.gene09370.t1 | AT5G22660 | 23.983 | 467 | 262 | 17 | 8 | 445 | 12 | 414 | 4.04e-11 | 65.5 |
MS.gene09370.t1 | AT1G66640 | 25.208 | 361 | 216 | 16 | 103 | 445 | 61 | 385 | 4.93e-11 | 65.1 |
MS.gene09370.t1 | AT5G56810 | 25.910 | 467 | 266 | 20 | 9 | 461 | 15 | 415 | 7.87e-11 | 64.7 |
Find 94 sgRNAs with CRISPR-Local
Find 132 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCATTACATTTGAATTTAA+AGG | 0.124626 | 4.1:+42063623 | MS.gene09370:CDS |
AGTTTCCAACCTCCTTTCTT+TGG | 0.204522 | 4.1:-42063553 | None:intergenic |
ACTCAAGGATCTTGCAATTA+TGG | 0.222983 | 4.1:+42063189 | MS.gene09370:CDS |
AGAAATCCTCCTTACTAGTA+TGG | 0.246783 | 4.1:+42063780 | MS.gene09370:CDS |
CTGTCTCTCTTGCATTAGTT+TGG | 0.282510 | 4.1:-42062214 | None:intergenic |
CTATATTCTCGGTGCGTCTT+TGG | 0.284156 | 4.1:-42062191 | None:intergenic |
ATTGCAAGATCCTTGAGTTT+TGG | 0.287479 | 4.1:-42063184 | None:intergenic |
GCAGATCGACTCCCATCTTT+TGG | 0.302315 | 4.1:-42062085 | None:intergenic |
TCTATCTGGTTGTCCACATT+TGG | 0.307537 | 4.1:+42062626 | MS.gene09370:CDS |
GTTTCCAACCTCCTTTCTTT+GGG | 0.310062 | 4.1:-42063552 | None:intergenic |
TAATTCAATTGAAGATCATT+TGG | 0.321337 | 4.1:+42064208 | MS.gene09370:CDS |
CATTAGTTTGGCTATATTCT+CGG | 0.336654 | 4.1:-42062202 | None:intergenic |
TCGCAATTTATTATATTTAA+CGG | 0.338276 | 4.1:+42063105 | MS.gene09370:CDS |
CACTGAAGGCTCCACCCATC+TGG | 0.366063 | 4.1:-42063576 | None:intergenic |
ACTCGTGGTCTTAAAATTGC+GGG | 0.408358 | 4.1:+42062476 | MS.gene09370:CDS |
AAAGTGAAGGTTGGGAATCT+TGG | 0.417455 | 4.1:-42062109 | None:intergenic |
GGTGGTCTTCATTGACATCT+TGG | 0.419009 | 4.1:-42064237 | None:intergenic |
ACAGATCCAAGTCAAGTTCC+TGG | 0.422138 | 4.1:-42062404 | None:intergenic |
ATCTGGTTGTCCACATTTGG+AGG | 0.433975 | 4.1:+42062629 | MS.gene09370:CDS |
ATTTCTTCTTTGGACATCAC+AGG | 0.436128 | 4.1:-42062153 | None:intergenic |
GGTAATTGAAAGTGAAGGTT+GGG | 0.443422 | 4.1:-42062117 | None:intergenic |
TAAGTGAAAAGAGGTGTTGA+TGG | 0.446688 | 4.1:-42062682 | None:intergenic |
TATTTGCATTTGTAAGCGTC+TGG | 0.451435 | 4.1:+42062863 | MS.gene09370:CDS |
AATGTCAAAACATTGGTTCT+CGG | 0.452658 | 4.1:+42062924 | MS.gene09370:CDS |
CAAGGTCCAGGAACTTGACT+TGG | 0.457085 | 4.1:+42062398 | MS.gene09370:CDS |
AAATTCAAATGTAATGAGAC+TGG | 0.466724 | 4.1:-42063618 | None:intergenic |
CATGTGTTCTATCCAAAAGA+TGG | 0.467948 | 4.1:+42062073 | MS.gene09370:CDS |
ATAAGTAGATTAAGAGGGTG+GGG | 0.485569 | 4.1:-42064258 | None:intergenic |
TGTAAGTCACTCAAGTAAGT+TGG | 0.491102 | 4.1:+42063688 | MS.gene09370:CDS |
GGCATTAGATCTCAAGGTCC+AGG | 0.496808 | 4.1:+42062386 | MS.gene09370:CDS |
TGTACACATGTGGGTTTCAA+AGG | 0.501751 | 4.1:+42062257 | MS.gene09370:CDS |
TGAAATCAACTCCCAAAGAA+AGG | 0.507406 | 4.1:+42063541 | MS.gene09370:CDS |
TGATAAGTAGATTAAGAGGG+TGG | 0.510749 | 4.1:-42064260 | None:intergenic |
TATGAAGAACTTCAAGTGAC+GGG | 0.519558 | 4.1:-42062773 | None:intergenic |
GAAATCCTCCTTACTAGTAT+GGG | 0.519980 | 4.1:+42063781 | MS.gene09370:CDS |
ACTTCGTACCCATACTAGTA+AGG | 0.520038 | 4.1:-42063789 | None:intergenic |
CGGTGCGTCTTTGGAAAGCA+AGG | 0.521282 | 4.1:-42062182 | None:intergenic |
TCTCTTCAATAAGTGAAAAG+AGG | 0.524063 | 4.1:-42062691 | None:intergenic |
TGTACACATGTGGGTTTCAA+AGG | 0.528762 | 4.1:+42062365 | MS.gene09370:CDS |
ATCACAGGGTCTGAAATCTC+TGG | 0.529937 | 4.1:-42062138 | None:intergenic |
GATAAGTAGATTAAGAGGGT+GGG | 0.533560 | 4.1:-42064259 | None:intergenic |
CCGAAAATATAAGAAAACTA+AGG | 0.538047 | 4.1:+42062310 | MS.gene09370:CDS |
CACTCGTGGTCTTAAAATTG+CGG | 0.539007 | 4.1:+42062475 | MS.gene09370:CDS |
TTCAAAGGCATTAGATCTCA+AGG | 0.542872 | 4.1:+42062380 | MS.gene09370:CDS |
TTTCTTCTTTGGACATCACA+GGG | 0.548590 | 4.1:-42062152 | None:intergenic |
TGGTAATTGAAAGTGAAGGT+TGG | 0.551378 | 4.1:-42062118 | None:intergenic |
CTAAGGCTTCGTAGCGACAA+AGG | 0.553006 | 4.1:+42062327 | MS.gene09370:CDS |
TGTTATGCAGTTTCTCAGCA+TGG | 0.553413 | 4.1:+42063048 | MS.gene09370:intron |
GGACAACACTTAACAGAAGT+AGG | 0.560485 | 4.1:-42062735 | None:intergenic |
ATGTGTTCTATCCAAAAGAT+GGG | 0.563690 | 4.1:+42062074 | MS.gene09370:CDS |
GACGGGGCATTAATTTGTAG+TGG | 0.566180 | 4.1:-42062756 | None:intergenic |
AAGTGAAAAGAGGTGTTGAT+GGG | 0.567500 | 4.1:-42062681 | None:intergenic |
TAGAATACCTCACAGTTTCA+CGG | 0.569419 | 4.1:-42062566 | None:intergenic |
ACCCACATGTGTACATTATG+TGG | 0.569448 | 4.1:-42062249 | None:intergenic |
AACTCCCAAAGAAAGGAGGT+TGG | 0.569947 | 4.1:+42063548 | MS.gene09370:CDS |
ACTTTCGAATGTCAAAACAT+TGG | 0.572766 | 4.1:+42062917 | MS.gene09370:CDS |
AATAGCAGCTTCATCAAGAG+TGG | 0.581159 | 4.1:-42062844 | None:intergenic |
AAATATCTGAGAATTGCAGT+TGG | 0.586019 | 4.1:+42063131 | MS.gene09370:CDS |
ACAGAATGCTCCAAAACTCA+AGG | 0.586809 | 4.1:+42063174 | MS.gene09370:CDS |
TGAAAAGAAGAATTGAGTGT+TGG | 0.588267 | 4.1:-42062510 | None:intergenic |
AGACTGGTTGTAAGACATGC+CGG | 0.589947 | 4.1:-42063602 | None:intergenic |
TCACTCAAGTAAGTTGGAGA+AGG | 0.592918 | 4.1:+42063694 | MS.gene09370:CDS |
GGTGGAGCCTTCAGTGACTC+CGG | 0.594165 | 4.1:+42063583 | MS.gene09370:CDS |
ATATGAAGAACTTCAAGTGA+CGG | 0.594331 | 4.1:-42062774 | None:intergenic |
AAAAGAAGTTCCTCCAAATG+TGG | 0.603065 | 4.1:-42062639 | None:intergenic |
AGACATGCCGGAGTCACTGA+AGG | 0.615639 | 4.1:-42063590 | None:intergenic |
AGGAGGTTGGAAACTCCAGA+TGG | 0.616739 | 4.1:+42063561 | MS.gene09370:CDS |
GGTGTTGATGGGTAATGCAA+AGG | 0.626011 | 4.1:-42062670 | None:intergenic |
AATTTGTATACACTCATGAA+AGG | 0.627380 | 4.1:+42062894 | MS.gene09370:CDS |
ACATGTGTACATTATGTGGC+TGG | 0.630203 | 4.1:-42062245 | None:intergenic |
TTCCACGTGTGAGTCACTCG+TGG | 0.631019 | 4.1:+42062461 | MS.gene09370:CDS |
ACTAATGCAAGAGAGACAGA+TGG | 0.635475 | 4.1:+42062218 | MS.gene09370:CDS |
AGTAGATTAAGAGGGTGGGG+TGG | 0.637994 | 4.1:-42064255 | None:intergenic |
GGTTGGAAACTCCAGATGGG+TGG | 0.638430 | 4.1:+42063565 | MS.gene09370:CDS |
AGCCACATAATGTACACATG+TGG | 0.643957 | 4.1:+42062247 | MS.gene09370:CDS |
CTAATGCAAGAGAGACAGAT+GGG | 0.644579 | 4.1:+42062219 | MS.gene09370:CDS |
GCCACATAATGTACACATGT+GGG | 0.648388 | 4.1:+42062248 | MS.gene09370:CDS |
AAGTAGGCATATATAAACAA+AGG | 0.650404 | 4.1:-42062719 | None:intergenic |
GCCACATGATGTACACATGT+GGG | 0.650684 | 4.1:+42062356 | MS.gene09370:CDS |
GGAGGTTGGAAACTCCAGAT+GGG | 0.652028 | 4.1:+42063562 | MS.gene09370:CDS |
ACATGTGTACATCATGTGGC+TGG | 0.656362 | 4.1:-42062353 | None:intergenic |
AGATGAAGAATCTTTAGTGA+CGG | 0.657169 | 4.1:-42062543 | None:intergenic |
AGGTATTCTATGTTTGATGA+CGG | 0.657979 | 4.1:+42062579 | MS.gene09370:CDS |
ACCCACATGTGTACATCATG+TGG | 0.672342 | 4.1:-42062357 | None:intergenic |
AATCAACTCCCAAAGAAAGG+AGG | 0.673141 | 4.1:+42063544 | MS.gene09370:CDS |
TTCATCTCCGTGAAACTGTG+AGG | 0.673351 | 4.1:+42062559 | MS.gene09370:CDS |
CTCGTGGTCTTAAAATTGCG+GGG | 0.673910 | 4.1:+42062477 | MS.gene09370:CDS |
TCGTACCCATACTAGTAAGG+AGG | 0.674938 | 4.1:-42063786 | None:intergenic |
GACCACGAGTGACTCACACG+TGG | 0.682798 | 4.1:-42062463 | None:intergenic |
AGCCACATGATGTACACATG+TGG | 0.685172 | 4.1:+42062355 | MS.gene09370:CDS |
TCTCTGGTAATTGAAAGTGA+AGG | 0.696256 | 4.1:-42062122 | None:intergenic |
TCACACGTGGAAAGCCTAAG+CGG | 0.701582 | 4.1:-42062450 | None:intergenic |
TATGCAGTTTCTCAGCATGG+AGG | 0.703511 | 4.1:+42063051 | MS.gene09370:intron |
ATGAAGAACTTCAAGTGACG+GGG | 0.715969 | 4.1:-42062772 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GAATTAATTAAATTGTTTAT+CGG | - | chr4.1:42063344-42063363 | None:intergenic | 10.0% |
!! | TTGAAAAAGAAAAATATTTA+TGG | - | chr4.1:42062973-42062992 | None:intergenic | 10.0% |
!! | TTTAAAAGATGAAATATAAT+AGG | + | chr4.1:42063254-42063273 | MS.gene09370:intron | 10.0% |
!!! | AAAATTCTAATGATAATTTT+TGG | + | chr4.1:42063499-42063518 | MS.gene09370:intron | 10.0% |
!! | ATGTAATTAAAAAATTTGAG+AGG | - | chr4.1:42064100-42064119 | None:intergenic | 15.0% |
!! | TCGCAATTTATTATATTTAA+CGG | + | chr4.1:42063105-42063124 | MS.gene09370:CDS | 15.0% |
!! | AATGAGAATAGAATTGAATA+TGG | - | chr4.1:42063019-42063038 | None:intergenic | 20.0% |
!! | AATTATTCAATATTTGTCAC+AGG | + | chr4.1:42064181-42064200 | MS.gene09370:intron | 20.0% |
!! | ACGTAAAATAGTTTAAAAGA+AGG | - | chr4.1:42063418-42063437 | None:intergenic | 20.0% |
!! | AGTATATAATAAACTCTGTA+TGG | - | chr4.1:42063834-42063853 | None:intergenic | 20.0% |
!! | AGTTTAAAAGAAGGTTAAAT+TGG | - | chr4.1:42063409-42063428 | None:intergenic | 20.0% |
!! | ATGAGAATAGAATTGAATAT+GGG | - | chr4.1:42063018-42063037 | None:intergenic | 20.0% |
!! | CTCATTACATTTGAATTTAA+AGG | + | chr4.1:42063623-42063642 | MS.gene09370:CDS | 20.0% |
!! | GTTTAAAAGAAGGTTAAATT+GGG | - | chr4.1:42063408-42063427 | None:intergenic | 20.0% |
!! | TAATTCAATTGAAGATCATT+TGG | + | chr4.1:42064208-42064227 | MS.gene09370:CDS | 20.0% |
!!! | CCTTAGTTTTCTTATATTTT+CGG | - | chr4.1:42062313-42062332 | None:intergenic | 20.0% |
!!! | TATGTTTTAATGAAAAGAGT+TGG | + | chr4.1:42063855-42063874 | MS.gene09370:intron | 20.0% |
! | AAATTCAAATGTAATGAGAC+TGG | - | chr4.1:42063621-42063640 | None:intergenic | 25.0% |
! | AAGTAGGCATATATAAACAA+AGG | - | chr4.1:42062722-42062741 | None:intergenic | 25.0% |
! | AATTTGTATACACTCATGAA+AGG | + | chr4.1:42062894-42062913 | MS.gene09370:CDS | 25.0% |
! | CCGAAAATATAAGAAAACTA+AGG | + | chr4.1:42062310-42062329 | MS.gene09370:CDS | 25.0% |
! | CTATTTACTATATATCCAGT+TGG | + | chr4.1:42063476-42063495 | MS.gene09370:intron | 25.0% |
! | GTTGGTATCTTAATATTTGT+TGG | + | chr4.1:42063873-42063892 | MS.gene09370:intron | 25.0% |
! | TCAAAACATAAAAACTGAGT+TGG | + | chr4.1:42063649-42063668 | MS.gene09370:CDS | 25.0% |
!! | GATCTCAATAATTTTCTATC+TGG | + | chr4.1:42062612-42062631 | MS.gene09370:CDS | 25.0% |
!! | TATAACACTCTTTTGTTGAT+AGG | - | chr4.1:42062050-42062069 | None:intergenic | 25.0% |
!! | TATCATTAGAATTTTCCAAC+TGG | - | chr4.1:42063494-42063513 | None:intergenic | 25.0% |
!! | TTTGTGAAGTCATATTTTCT+AGG | - | chr4.1:42062819-42062838 | None:intergenic | 25.0% |
!!! | AAGGTTTTTGATTTCTTCTT+TGG | - | chr4.1:42062166-42062185 | None:intergenic | 25.0% |
AAATATCTGAGAATTGCAGT+TGG | + | chr4.1:42063131-42063150 | MS.gene09370:CDS | 30.0% | |
ACTTTCGAATGTCAAAACAT+TGG | + | chr4.1:42062917-42062936 | MS.gene09370:CDS | 30.0% | |
AGATGAAGAATCTTTAGTGA+CGG | - | chr4.1:42062546-42062565 | None:intergenic | 30.0% | |
AGGTATTCTATGTTTGATGA+CGG | + | chr4.1:42062579-42062598 | MS.gene09370:CDS | 30.0% | |
AGTAGAAAAAAGTTTACGCA+TGG | + | chr4.1:42063751-42063770 | MS.gene09370:CDS | 30.0% | |
ATATGAAGAACTTCAAGTGA+CGG | - | chr4.1:42062777-42062796 | None:intergenic | 30.0% | |
ATGTGTTCTATCCAAAAGAT+GGG | + | chr4.1:42062074-42062093 | MS.gene09370:CDS | 30.0% | |
GTAGAAAAAAGTTTACGCAT+GGG | + | chr4.1:42063752-42063771 | MS.gene09370:CDS | 30.0% | |
TAAAAGAAGGTTAAATTGGG+AGG | - | chr4.1:42063405-42063424 | None:intergenic | 30.0% | |
TAAAGATAAAGCTGTGTTGT+TGG | - | chr4.1:42063963-42063982 | None:intergenic | 30.0% | |
TAGAAAAAAGTTTACGCATG+GGG | + | chr4.1:42063753-42063772 | MS.gene09370:CDS | 30.0% | |
TCTCTTCAATAAGTGAAAAG+AGG | - | chr4.1:42062694-42062713 | None:intergenic | 30.0% | |
TGAAAAGAAGAATTGAGTGT+TGG | - | chr4.1:42062513-42062532 | None:intergenic | 30.0% | |
TGAATATGGGAGACTAAATA+TGG | - | chr4.1:42063005-42063024 | None:intergenic | 30.0% | |
! | AAAAAATCTTATTGCCGCTT+AGG | + | chr4.1:42062436-42062455 | MS.gene09370:CDS | 30.0% |
! | CATTAGTTTGGCTATATTCT+CGG | - | chr4.1:42062205-42062224 | None:intergenic | 30.0% |
! | GTATCTTAATATTTGTTGGC+AGG | + | chr4.1:42063877-42063896 | MS.gene09370:intron | 30.0% |
!! | AATGTCAAAACATTGGTTCT+CGG | + | chr4.1:42062924-42062943 | MS.gene09370:CDS | 30.0% |
AAAAGAAGTTCCTCCAAATG+TGG | - | chr4.1:42062642-42062661 | None:intergenic | 35.0% | |
ACTCAAGGATCTTGCAATTA+TGG | + | chr4.1:42063189-42063208 | MS.gene09370:CDS | 35.0% | |
AGAAATCCTCCTTACTAGTA+TGG | + | chr4.1:42063780-42063799 | MS.gene09370:CDS | 35.0% | |
ATATAATAGGCTCGAAAGTC+TGG | + | chr4.1:42063267-42063286 | MS.gene09370:intron | 35.0% | |
ATTTCTTCTTTGGACATCAC+AGG | - | chr4.1:42062156-42062175 | None:intergenic | 35.0% | |
CATGTGTTCTATCCAAAAGA+TGG | + | chr4.1:42062073-42062092 | MS.gene09370:CDS | 35.0% | |
GAAATCCTCCTTACTAGTAT+GGG | + | chr4.1:42063781-42063800 | MS.gene09370:CDS | 35.0% | |
GGTAATTGAAAGTGAAGGTT+GGG | - | chr4.1:42062120-42062139 | None:intergenic | 35.0% | |
TAGAATACCTCACAGTTTCA+CGG | - | chr4.1:42062569-42062588 | None:intergenic | 35.0% | |
TATGAAGAACTTCAAGTGAC+GGG | - | chr4.1:42062776-42062795 | None:intergenic | 35.0% | |
TATTTGCATTTGTAAGCGTC+TGG | + | chr4.1:42062863-42062882 | MS.gene09370:CDS | 35.0% | |
TCTCTGGTAATTGAAAGTGA+AGG | - | chr4.1:42062125-42062144 | None:intergenic | 35.0% | |
TGAAATCAACTCCCAAAGAA+AGG | + | chr4.1:42063541-42063560 | MS.gene09370:CDS | 35.0% | |
TGGTAATTGAAAGTGAAGGT+TGG | - | chr4.1:42062121-42062140 | None:intergenic | 35.0% | |
TGTAAGTCACTCAAGTAAGT+TGG | + | chr4.1:42063688-42063707 | MS.gene09370:CDS | 35.0% | |
TTTCTTCTTTGGACATCACA+GGG | - | chr4.1:42062155-42062174 | None:intergenic | 35.0% | |
! | ACTCTTCTTTTCTTTGCAGT+AGG | - | chr4.1:42063734-42063753 | None:intergenic | 35.0% |
! | ATTGCAAGATCCTTGAGTTT+TGG | - | chr4.1:42063187-42063206 | None:intergenic | 35.0% |
! | TATGTCTAGAACAGTAAGAG+AGG | - | chr4.1:42063932-42063951 | None:intergenic | 35.0% |
!! | AAGTGAAAAGAGGTGTTGAT+GGG | - | chr4.1:42062684-42062703 | None:intergenic | 35.0% |
!! | TAAGTGAAAAGAGGTGTTGA+TGG | - | chr4.1:42062685-42062704 | None:intergenic | 35.0% |
!! | TTATATTTTCGGTGCGTCTT+AGG | - | chr4.1:42062302-42062321 | None:intergenic | 35.0% |
!! | TTCAAAGGCATTAGATCTCA+AGG | + | chr4.1:42062380-42062399 | MS.gene09370:CDS | 35.0% |
!!! | GCGGCAATAAGATTTTTTCA+TGG | - | chr4.1:42062434-42062453 | None:intergenic | 35.0% |
AAAGTGAAGGTTGGGAATCT+TGG | - | chr4.1:42062112-42062131 | None:intergenic | 40.0% | |
AAGACTTGGCGAAAGATACA+TGG | + | chr4.1:42063303-42063322 | MS.gene09370:intron | 40.0% | |
AATAGCAGCTTCATCAAGAG+TGG | - | chr4.1:42062847-42062866 | None:intergenic | 40.0% | |
AATCAACTCCCAAAGAAAGG+AGG | + | chr4.1:42063544-42063563 | MS.gene09370:CDS | 40.0% | |
ACAGAATGCTCCAAAACTCA+AGG | + | chr4.1:42063174-42063193 | MS.gene09370:CDS | 40.0% | |
ACATGTGTACATTATGTGGC+TGG | - | chr4.1:42062248-42062267 | None:intergenic | 40.0% | |
ACCCACATGTGTACATTATG+TGG | - | chr4.1:42062252-42062271 | None:intergenic | 40.0% | |
ACTAATGCAAGAGAGACAGA+TGG | + | chr4.1:42062218-42062237 | MS.gene09370:CDS | 40.0% | |
ACTTCGTACCCATACTAGTA+AGG | - | chr4.1:42063792-42063811 | None:intergenic | 40.0% | |
AGCCACATAATGTACACATG+TGG | + | chr4.1:42062247-42062266 | MS.gene09370:CDS | 40.0% | |
AGTTTCCAACCTCCTTTCTT+TGG | - | chr4.1:42063556-42063575 | None:intergenic | 40.0% | |
ATGAAGAACTTCAAGTGACG+GGG | - | chr4.1:42062775-42062794 | None:intergenic | 40.0% | |
CACACACACAATTACATTCG+TGG | + | chr4.1:42064003-42064022 | MS.gene09370:intron | 40.0% | |
CTAATGCAAGAGAGACAGAT+GGG | + | chr4.1:42062219-42062238 | MS.gene09370:CDS | 40.0% | |
CTGTCTCTCTTGCATTAGTT+TGG | - | chr4.1:42062217-42062236 | None:intergenic | 40.0% | |
GCCACATAATGTACACATGT+GGG | + | chr4.1:42062248-42062267 | MS.gene09370:CDS | 40.0% | |
GGACAACACTTAACAGAAGT+AGG | - | chr4.1:42062738-42062757 | None:intergenic | 40.0% | |
GTTTCCAACCTCCTTTCTTT+GGG | - | chr4.1:42063555-42063574 | None:intergenic | 40.0% | |
TCTATCTGGTTGTCCACATT+TGG | + | chr4.1:42062626-42062645 | MS.gene09370:CDS | 40.0% | |
TGTACACATGTGGGTTTCAA+AGG | + | chr4.1:42062257-42062276 | MS.gene09370:CDS | 40.0% | |
TGTTATGCAGTTTCTCAGCA+TGG | + | chr4.1:42063048-42063067 | MS.gene09370:intron | 40.0% | |
! | ACTCGTGGTCTTAAAATTGC+GGG | + | chr4.1:42062476-42062495 | MS.gene09370:CDS | 40.0% |
! | ATTTGTTGGCAGGATGTTGT+GGG | + | chr4.1:42063887-42063906 | MS.gene09370:intron | 40.0% |
! | CACTCGTGGTCTTAAAATTG+CGG | + | chr4.1:42062475-42062494 | MS.gene09370:CDS | 40.0% |
! | GATAAAGCTGTGTTGTTGGT+CGG | - | chr4.1:42063959-42063978 | None:intergenic | 40.0% |
! | TATTTGTTGGCAGGATGTTG+TGG | + | chr4.1:42063886-42063905 | MS.gene09370:intron | 40.0% |
! | TCACTCAAGTAAGTTGGAGA+AGG | + | chr4.1:42063694-42063713 | MS.gene09370:CDS | 40.0% |
AACTCCCAAAGAAAGGAGGT+TGG | + | chr4.1:42063548-42063567 | MS.gene09370:CDS | 45.0% | |
ACAGATCCAAGTCAAGTTCC+TGG | - | chr4.1:42062407-42062426 | None:intergenic | 45.0% | |
ACATGTGTACATCATGTGGC+TGG | - | chr4.1:42062356-42062375 | None:intergenic | 45.0% | |
ACCCACATGTGTACATCATG+TGG | - | chr4.1:42062360-42062379 | None:intergenic | 45.0% | |
AGCCACATGATGTACACATG+TGG | + | chr4.1:42062355-42062374 | MS.gene09370:CDS | 45.0% | |
ATCTGGTTGTCCACATTTGG+AGG | + | chr4.1:42062629-42062648 | MS.gene09370:CDS | 45.0% | |
GCACAAGAAGAGCAAAGACT+TGG | + | chr4.1:42063289-42063308 | MS.gene09370:intron | 45.0% | |
GCCACATGATGTACACATGT+GGG | + | chr4.1:42062356-42062375 | MS.gene09370:CDS | 45.0% | |
GGTGGTCTTCATTGACATCT+TGG | - | chr4.1:42064240-42064259 | None:intergenic | 45.0% | |
TATGCAGTTTCTCAGCATGG+AGG | + | chr4.1:42063051-42063070 | MS.gene09370:intron | 45.0% | |
TCGTACCCATACTAGTAAGG+AGG | - | chr4.1:42063789-42063808 | None:intergenic | 45.0% | |
TTCATCTCCGTGAAACTGTG+AGG | + | chr4.1:42062559-42062578 | MS.gene09370:CDS | 45.0% | |
TTTGTTGGCAGGATGTTGTG+GGG | + | chr4.1:42063888-42063907 | MS.gene09370:intron | 45.0% | |
! | AGACTGGTTGTAAGACATGC+CGG | - | chr4.1:42063605-42063624 | None:intergenic | 45.0% |
! | ATCACAGGGTCTGAAATCTC+TGG | - | chr4.1:42062141-42062160 | None:intergenic | 45.0% |
! | CTATATTCTCGGTGCGTCTT+TGG | - | chr4.1:42062194-42062213 | None:intergenic | 45.0% |
! | CTCGTGGTCTTAAAATTGCG+GGG | + | chr4.1:42062477-42062496 | MS.gene09370:CDS | 45.0% |
!! | GACGGGGCATTAATTTGTAG+TGG | - | chr4.1:42062759-42062778 | None:intergenic | 45.0% |
!! | GGTGTTGATGGGTAATGCAA+AGG | - | chr4.1:42062673-42062692 | None:intergenic | 45.0% |
AGGAGGTTGGAAACTCCAGA+TGG | + | chr4.1:42063561-42063580 | MS.gene09370:CDS | 50.0% | |
CAAGGTCCAGGAACTTGACT+TGG | + | chr4.1:42062398-42062417 | MS.gene09370:CDS | 50.0% | |
CTAAGGCTTCGTAGCGACAA+AGG | + | chr4.1:42062327-42062346 | MS.gene09370:CDS | 50.0% | |
GGAGGTTGGAAACTCCAGAT+GGG | + | chr4.1:42063562-42063581 | MS.gene09370:CDS | 50.0% | |
GGCATTAGATCTCAAGGTCC+AGG | + | chr4.1:42062386-42062405 | MS.gene09370:CDS | 50.0% | |
TCACACGTGGAAAGCCTAAG+CGG | - | chr4.1:42062453-42062472 | None:intergenic | 50.0% | |
!! | GCAGATCGACTCCCATCTTT+TGG | - | chr4.1:42062088-42062107 | None:intergenic | 50.0% |
AGACATGCCGGAGTCACTGA+AGG | - | chr4.1:42063593-42063612 | None:intergenic | 55.0% | |
GGTTGGAAACTCCAGATGGG+TGG | + | chr4.1:42063565-42063584 | MS.gene09370:CDS | 55.0% | |
TTCCACGTGTGAGTCACTCG+TGG | + | chr4.1:42062461-42062480 | MS.gene09370:CDS | 55.0% | |
! | CGGTGCGTCTTTGGAAAGCA+AGG | - | chr4.1:42062185-42062204 | None:intergenic | 55.0% |
CACTGAAGGCTCCACCCATC+TGG | - | chr4.1:42063579-42063598 | None:intergenic | 60.0% | |
GACCACGAGTGACTCACACG+TGG | - | chr4.1:42062466-42062485 | None:intergenic | 60.0% | |
GGTGGAGCCTTCAGTGACTC+CGG | + | chr4.1:42063583-42063602 | MS.gene09370:CDS | 60.0% | |
GTTGGCAGGATGTTGTGGGG+TGG | + | chr4.1:42063891-42063910 | MS.gene09370:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 42061973 | 42064271 | 42061973 | ID=MS.gene09370 |
chr4.1 | mRNA | 42061973 | 42064271 | 42061973 | ID=MS.gene09370.t1;Parent=MS.gene09370 |
chr4.1 | exon | 42061973 | 42062962 | 42061973 | ID=MS.gene09370.t1.exon1;Parent=MS.gene09370.t1 |
chr4.1 | CDS | 42061973 | 42062962 | 42061973 | ID=cds.MS.gene09370.t1;Parent=MS.gene09370.t1 |
chr4.1 | exon | 42063058 | 42063210 | 42063058 | ID=MS.gene09370.t1.exon2;Parent=MS.gene09370.t1 |
chr4.1 | CDS | 42063058 | 42063210 | 42063058 | ID=cds.MS.gene09370.t1;Parent=MS.gene09370.t1 |
chr4.1 | exon | 42063533 | 42063802 | 42063533 | ID=MS.gene09370.t1.exon3;Parent=MS.gene09370.t1 |
chr4.1 | CDS | 42063533 | 42063802 | 42063533 | ID=cds.MS.gene09370.t1;Parent=MS.gene09370.t1 |
chr4.1 | exon | 42064203 | 42064271 | 42064203 | ID=MS.gene09370.t1.exon4;Parent=MS.gene09370.t1 |
chr4.1 | CDS | 42064203 | 42064271 | 42064203 | ID=cds.MS.gene09370.t1;Parent=MS.gene09370.t1 |
Gene Sequence |
Protein sequence |