AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene07678


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07678.t1 MTR_4g056020 91.068 459 41 0 1 459 1 459 0.0 846
MS.gene07678.t1 MTR_4g055990 81.637 501 50 3 1 459 1 501 0.0 785
MS.gene07678.t1 MTR_4g056030 84.787 447 68 0 1 447 1 447 0.0 759
MS.gene07678.t1 MTR_4g055990 80.122 493 53 5 1 451 1 490 0.0 748
MS.gene07678.t1 MTR_4g055580 79.065 492 65 3 1 455 92 582 0.0 737
MS.gene07678.t1 MTR_4g056040 77.302 467 76 1 1 437 1 467 0.0 712
MS.gene07678.t1 MTR_4g056070 76.659 437 62 1 1 397 1 437 0.0 655
MS.gene07678.t1 MTR_1g038710 68.304 448 134 3 1 442 11 456 0.0 573
MS.gene07678.t1 MTR_1g090883 63.739 353 124 3 2 352 12 362 1.75e-147 425
MS.gene07678.t1 MTR_7g110920 54.190 358 107 5 99 437 1 320 2.49e-115 342
MS.gene07678.t1 MTR_4g056020 91.411 163 14 0 297 459 1 163 2.42e-103 305
MS.gene07678.t1 MTR_4g093690 56.985 272 108 6 1 268 10 276 2.73e-86 265
MS.gene07678.t1 MTR_1g090900 66.667 177 56 2 1 174 1 177 4.20e-68 216
MS.gene07678.t1 MTR_4g056010 88.889 99 11 0 69 167 2 100 2.56e-55 179
MS.gene07678.t1 MTR_5g084070 31.517 422 248 16 5 416 9 399 9.12e-36 137
MS.gene07678.t1 MTR_5g080710 30.788 419 245 15 9 412 33 421 7.30e-32 127
MS.gene07678.t1 MTR_4g032730 30.088 452 237 20 9 411 15 436 1.49e-29 120
MS.gene07678.t1 MTR_8g062270 30.516 426 256 16 9 411 16 424 1.03e-28 118
MS.gene07678.t1 MTR_1g090890 60.440 91 30 2 350 437 29 116 6.65e-28 107
MS.gene07678.t1 MTR_8g467800 32.614 417 240 16 5 400 16 412 1.99e-27 114
MS.gene07678.t1 MTR_8g445780 29.630 405 240 13 9 396 13 389 1.98e-26 110
MS.gene07678.t1 MTR_7g056433 28.842 423 221 17 4 415 7 360 6.55e-26 109
MS.gene07678.t1 MTR_8g468810 29.812 426 248 18 4 403 20 420 1.09e-25 109
MS.gene07678.t1 MTR_8g014260 29.224 438 250 17 6 413 13 420 2.73e-25 108
MS.gene07678.t1 MTR_2g083840 30.445 427 248 18 9 411 21 422 3.51e-25 107
MS.gene07678.t1 MTR_3g108560 28.868 433 226 17 6 429 17 376 5.57e-25 106
MS.gene07678.t1 MTR_8g058970 27.907 473 278 16 4 434 14 465 1.91e-24 105
MS.gene07678.t1 MTR_7g115270 27.563 439 242 16 9 433 12 388 3.10e-24 104
MS.gene07678.t1 MTR_0492s0020 29.024 410 212 19 9 414 86 420 3.01e-23 102
MS.gene07678.t1 MTR_0543s0010 29.024 410 212 19 9 414 86 420 4.60e-23 101
MS.gene07678.t1 MTR_1g041245 36.842 190 106 6 9 193 11 191 1.77e-22 99.4
MS.gene07678.t1 MTR_8g468810 32.362 309 168 14 4 290 20 309 1.04e-21 95.9
MS.gene07678.t1 MTR_6g045333 26.570 414 232 14 9 411 61 413 1.07e-21 97.4
MS.gene07678.t1 MTR_8g468810 32.362 309 168 14 4 290 20 309 1.42e-21 95.5
MS.gene07678.t1 MTR_8g468810 32.362 309 168 14 4 290 20 309 1.47e-21 95.9
MS.gene07678.t1 MTR_8g468840 28.000 425 268 15 8 411 13 420 1.82e-21 97.1
MS.gene07678.t1 MTR_8g468810 31.672 341 188 16 4 318 20 341 3.17e-21 95.5
MS.gene07678.t1 MTR_8g467800 34.967 306 169 11 5 294 16 307 3.29e-21 94.7
MS.gene07678.t1 MTR_5g008950 26.190 420 211 16 11 414 1 337 3.37e-21 95.5
MS.gene07678.t1 MTR_7g007080 27.655 452 234 20 7 438 2 380 3.88e-21 95.5
MS.gene07678.t1 MTR_7g007340 27.152 453 228 15 4 448 8 366 1.34e-20 93.6
MS.gene07678.t1 MTR_7g098570 28.019 414 214 14 9 411 20 360 2.21e-20 94.0
MS.gene07678.t1 MTR_1g053025 26.304 441 249 17 9 433 2 382 2.55e-20 92.8
MS.gene07678.t1 MTR_3g107100 26.506 415 232 15 5 411 7 356 1.86e-19 90.5
MS.gene07678.t1 MTR_3g108150 28.442 443 226 19 8 433 12 380 3.28e-19 89.7
MS.gene07678.t1 MTR_8g014160 27.891 441 202 17 4 411 36 393 9.42e-19 88.6
MS.gene07678.t1 MTR_3g036250 25.113 442 233 13 6 433 2 359 1.37e-18 87.4
MS.gene07678.t1 MTR_2g007400 24.892 462 247 18 9 440 12 403 3.32e-18 86.7
MS.gene07678.t1 MTR_7g033990 23.133 415 233 15 9 411 11 351 3.49e-18 86.7
MS.gene07678.t1 MTR_2g008320 26.077 441 247 18 9 436 52 426 3.91e-18 87.0
MS.gene07678.t1 MTR_8g469020 28.995 438 260 22 9 416 7 423 6.94e-18 86.3
MS.gene07678.t1 MTR_7g034115 37.306 193 101 7 9 193 11 191 1.97e-17 84.3
MS.gene07678.t1 MTR_3g023630 24.574 411 229 15 9 411 8 345 3.27e-17 83.6
MS.gene07678.t1 MTR_7g026500 24.074 432 238 13 8 420 13 373 3.62e-17 83.6
MS.gene07678.t1 MTR_7g060470 25.173 433 242 16 9 423 3 371 4.26e-17 83.2
MS.gene07678.t1 MTR_3g048290 27.191 445 279 16 5 423 19 444 4.51e-17 84.0
MS.gene07678.t1 MTR_5g039950 28.777 417 231 19 9 411 23 387 5.91e-17 83.2
MS.gene07678.t1 MTR_8g058965 28.211 436 265 18 9 416 13 428 6.30e-17 83.2
MS.gene07678.t1 MTR_8g062310 34.123 211 118 10 9 213 25 220 7.33e-17 82.8
MS.gene07678.t1 MTR_8g468760 27.626 438 238 19 1 412 1 385 7.65e-17 82.8
MS.gene07678.t1 MTR_5g007410 24.819 415 231 16 11 411 28 375 7.99e-17 82.8
MS.gene07678.t1 MTR_3g082890 26.714 423 231 16 6 411 94 454 8.92e-17 82.8
MS.gene07678.t1 MTR_3g107120 26.490 453 246 14 1 434 1 385 9.97e-17 82.4
MS.gene07678.t1 MTR_1g013560 25.059 427 266 11 5 411 15 407 1.22e-16 82.4
MS.gene07678.t1 MTR_4g039440 24.331 411 235 15 9 411 34 376 1.33e-16 82.0
MS.gene07678.t1 MTR_8g085430 33.168 202 104 7 9 193 11 198 2.38e-16 80.5
MS.gene07678.t1 MTR_3g109982 26.013 469 284 14 4 427 8 458 3.00e-16 82.0
MS.gene07678.t1 MTR_3g107160 24.586 423 233 14 4 411 5 356 6.27e-16 79.7
MS.gene07678.t1 MTR_4g080787 26.477 457 271 21 6 423 13 443 6.34e-16 80.5
MS.gene07678.t1 MTR_6g011460 24.350 423 237 15 9 421 46 395 7.27e-16 79.7
MS.gene07678.t1 MTR_7g032380 32.461 191 113 7 9 193 11 191 8.27e-16 79.0
MS.gene07678.t1 MTR_4g080773 27.912 455 270 21 6 423 13 446 1.62e-15 79.0
MS.gene07678.t1 MTR_4g080773 27.912 455 270 21 6 423 13 446 1.67e-15 79.0
MS.gene07678.t1 MTR_2g047848 25.527 427 266 18 4 411 2 395 2.44e-15 78.2
MS.gene07678.t1 MTR_1g066830 23.641 423 250 17 9 423 8 365 3.91e-15 77.4
MS.gene07678.t1 MTR_2g008310 25.000 412 232 16 9 412 2 344 4.05e-15 77.4
MS.gene07678.t1 MTR_3g108560 29.310 348 170 14 6 346 17 295 4.19e-15 76.3
MS.gene07678.t1 MTR_5g045510 34.715 193 105 10 9 193 12 191 4.21e-15 77.0
MS.gene07678.t1 MTR_5g058100 25.571 438 238 17 9 433 9 371 4.28e-15 77.0
MS.gene07678.t1 MTR_7g033945 34.503 171 90 6 9 165 11 173 6.40e-15 73.2
MS.gene07678.t1 MTR_2g007500 35.106 188 103 6 9 193 14 185 7.35e-15 75.9
MS.gene07678.t1 MTR_1g085120 25.522 431 234 18 9 424 92 450 7.98e-15 77.0
MS.gene07678.t1 MTR_1g085120 25.747 435 228 19 9 424 167 525 9.24e-15 77.0
MS.gene07678.t1 MTR_7g034110 30.851 188 122 4 9 193 11 193 1.09e-14 75.5
MS.gene07678.t1 MTR_7g056447 34.272 213 123 9 1 206 1 203 1.10e-14 74.7
MS.gene07678.t1 MTR_0009s0080 25.000 420 232 16 7 411 16 367 1.58e-14 75.9
MS.gene07678.t1 MTR_2g005990 31.863 204 115 7 9 195 6 202 1.67e-14 75.5
MS.gene07678.t1 MTR_7g098510 32.804 189 118 3 7 193 16 197 1.78e-14 75.5
MS.gene07678.t1 MTR_2g091145 26.744 430 254 16 5 411 17 408 1.82e-14 75.5
MS.gene07678.t1 MTR_5g092960 26.316 456 265 21 5 419 15 440 1.99e-14 75.5
MS.gene07678.t1 MTR_3g071850 23.585 424 248 13 9 419 24 384 2.11e-14 76.3
MS.gene07678.t1 MTR_1g014450 24.719 445 243 19 4 411 11 400 2.63e-14 75.1
MS.gene07678.t1 MTR_1g108820 24.878 410 236 13 9 411 8 352 2.96e-14 74.7
MS.gene07678.t1 MTR_7g098480 25.304 411 231 11 7 411 16 356 3.55e-14 74.7
MS.gene07678.t1 MTR_2g036470 25.571 438 234 19 9 426 14 379 3.68e-14 74.3
MS.gene07678.t1 MTR_1g013560 32.512 203 116 6 5 195 15 208 4.47e-14 73.6
MS.gene07678.t1 MTR_7g033915 32.804 189 100 7 9 193 11 176 4.52e-14 73.9
MS.gene07678.t1 MTR_5g073420 23.944 426 227 15 9 420 11 353 6.79e-14 73.6
MS.gene07678.t1 MTR_8g062010 33.168 202 113 7 1 191 1 191 7.06e-14 73.6
MS.gene07678.t1 MTR_3g087260 28.855 454 245 20 7 416 10 429 7.96e-14 73.6
MS.gene07678.t1 MTR_7g088260 24.499 449 242 17 4 433 86 456 1.48e-13 72.8
MS.gene07678.t1 MTR_4g080590 24.831 443 292 19 9 429 23 446 3.00e-13 72.0
MS.gene07678.t1 MTR_8g070950 32.653 196 114 6 6 193 12 197 4.83e-13 71.2
MS.gene07678.t1 MTR_1g115245 32.941 170 100 4 4 163 21 186 6.17e-13 69.7
MS.gene07678.t1 MTR_7g075820 23.789 454 245 17 9 433 6 387 7.73e-13 70.5
MS.gene07678.t1 MTR_1g013840 25.874 429 251 17 9 411 56 443 8.46e-13 70.5
MS.gene07678.t1 MTR_5g040850 24.545 440 261 16 4 418 2 395 8.54e-13 70.5
MS.gene07678.t1 MTR_6g022360 31.282 195 110 6 3 193 37 211 1.58e-12 69.3
MS.gene07678.t1 MTR_2g047858 25.571 438 241 15 9 411 115 502 1.92e-12 69.7
MS.gene07678.t1 MTR_1g021825 23.195 457 287 13 4 438 12 426 2.89e-12 68.6
MS.gene07678.t1 MTR_1g107385 30.851 282 150 13 9 259 32 299 3.74e-12 68.2
MS.gene07678.t1 MTR_7g055943 30.952 210 121 8 3 204 34 227 4.11e-12 68.2
MS.gene07678.t1 MTR_2g094750 27.456 397 230 18 11 361 92 476 4.33e-12 68.6
MS.gene07678.t1 MTR_3g082890 24.672 458 233 16 6 411 14 411 4.38e-12 68.2
MS.gene07678.t1 MTR_1g108820 31.633 196 122 6 9 202 8 193 4.41e-12 67.8
MS.gene07678.t1 MTR_1g021825 23.195 457 287 13 4 438 83 497 4.42e-12 68.6
MS.gene07678.t1 MTR_4g050930 28.267 329 210 11 7 322 27 342 4.96e-12 67.8
MS.gene07678.t1 MTR_1g085120 32.653 196 107 10 9 193 179 360 9.88e-12 67.0
MS.gene07678.t1 MTR_1g013630 29.518 332 178 15 5 309 35 337 1.08e-11 66.6
MS.gene07678.t1 MTR_4g050930 28.267 329 210 11 7 322 27 342 1.21e-11 67.0
MS.gene07678.t1 MTR_8g062300 25.439 456 264 18 4 413 21 446 1.47e-11 66.6
MS.gene07678.t1 MTR_3g023270 26.271 354 224 15 5 342 8 340 2.29e-11 65.5
MS.gene07678.t1 MTR_5g061680 34.359 195 106 10 9 193 11 193 2.35e-11 65.1
MS.gene07678.t1 MTR_1g077420 30.542 203 114 9 7 197 2 189 2.75e-11 64.3
MS.gene07678.t1 MTR_3g040700 29.592 196 124 5 4 193 38 225 3.94e-11 65.1
MS.gene07678.t1 MTR_8g017280 30.952 210 120 7 8 209 35 227 4.10e-11 64.3
MS.gene07678.t1 MTR_4g047950 27.208 283 174 9 5 262 9 284 4.20e-11 65.1
MS.gene07678.t1 MTR_7g110910 81.579 38 7 0 1 38 158 195 4.38e-11 62.4
MS.gene07678.t1 MTR_5g021550 35.135 148 81 5 5 137 15 162 5.08e-11 61.6
MS.gene07678.t1 MTR_5g058000 30.570 193 115 8 9 194 8 188 7.15e-11 63.9
MS.gene07678.t1 MTR_1089s0010 24.344 419 232 16 6 415 5 347 7.54e-11 63.9
MS.gene07678.t1 MTR_8g017280 32.258 186 110 6 8 185 35 212 7.78e-11 64.3
MS.gene07678.t1 MTR_2g007450 29.302 215 124 7 1 193 8 216 9.82e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07678.t1 AT4G00315 30.067 449 250 21 9 422 2 421 6.36e-32 127
MS.gene07678.t1 AT4G14103 31.070 383 219 14 9 363 8 373 1.26e-31 126
MS.gene07678.t1 AT4G14103 32.222 360 201 13 9 342 8 350 2.59e-31 124
MS.gene07678.t1 AT4G14103 32.222 360 201 13 9 342 8 350 2.59e-31 124
MS.gene07678.t1 AT1G55660 29.054 444 261 20 9 422 53 472 3.77e-31 125
MS.gene07678.t1 AT4G10400 29.032 434 266 14 9 433 2 402 3.94e-30 121
MS.gene07678.t1 AT4G10400 29.032 434 266 14 9 433 2 402 3.94e-30 121
MS.gene07678.t1 AT4G10400 29.032 434 266 14 9 433 2 402 3.94e-30 121
MS.gene07678.t1 AT3G59190 31.421 366 207 13 9 342 12 365 7.28e-29 117
MS.gene07678.t1 AT3G59190 28.429 503 282 20 9 449 12 498 2.27e-28 117
MS.gene07678.t1 AT4G14096 31.667 360 198 16 8 342 7 343 7.80e-28 115
MS.gene07678.t1 AT4G14096 31.667 360 198 16 8 342 7 343 7.80e-28 115
MS.gene07678.t1 AT2G26860 29.952 414 260 13 9 411 2 396 2.49e-27 113
MS.gene07678.t1 AT2G26860 29.952 414 260 13 9 411 2 396 2.49e-27 113
MS.gene07678.t1 AT3G50710 29.466 431 246 20 9 416 2 397 2.81e-26 110
MS.gene07678.t1 AT4G26340 27.098 417 257 14 9 410 2 386 3.43e-26 110
MS.gene07678.t1 AT3G59230 28.540 459 254 15 9 416 12 447 9.07e-26 110
MS.gene07678.t1 AT3G59210 32.249 369 200 14 5 341 3 353 1.27e-25 109
MS.gene07678.t1 AT3G59210 32.249 369 200 14 5 341 3 353 1.27e-25 109
MS.gene07678.t1 AT3G59210 32.249 369 200 14 5 341 3 353 1.27e-25 109
MS.gene07678.t1 AT3G59210 32.249 369 200 14 5 341 3 353 1.27e-25 109
MS.gene07678.t1 AT3G59210 32.249 369 200 14 5 341 3 353 1.27e-25 109
MS.gene07678.t1 AT3G59160 26.764 411 224 13 9 360 13 405 2.75e-25 108
MS.gene07678.t1 AT5G56380 26.577 444 276 14 9 427 2 420 2.75e-25 108
MS.gene07678.t1 AT5G56380 26.577 444 276 14 9 427 2 420 2.75e-25 108
MS.gene07678.t1 AT1G55660 29.762 336 188 13 9 321 53 363 3.70e-25 106
MS.gene07678.t1 AT1G51370 30.365 438 240 19 7 420 17 413 8.61e-25 106
MS.gene07678.t1 AT4G22280 32.231 363 219 12 9 362 2 346 2.57e-24 105
MS.gene07678.t1 AT4G22280 32.853 347 206 12 9 346 2 330 4.22e-24 103
MS.gene07678.t1 AT5G41840 30.809 383 200 13 9 342 14 380 4.33e-24 105
MS.gene07678.t1 AT5G62970 27.891 441 254 17 9 411 2 416 9.78e-24 103
MS.gene07678.t1 AT3G03040 28.919 370 209 9 9 342 2 353 1.62e-23 103
MS.gene07678.t1 AT5G38590 27.546 432 266 14 9 425 2 401 2.19e-23 102
MS.gene07678.t1 AT5G38396 30.053 376 205 14 9 346 2 357 5.62e-23 101
MS.gene07678.t1 AT3G03030 29.111 371 212 10 9 342 2 358 9.80e-23 100
MS.gene07678.t1 AT4G26350 25.522 431 266 14 9 416 2 400 9.96e-23 100
MS.gene07678.t1 AT1G58310 30.026 383 201 13 9 342 8 372 1.34e-22 100
MS.gene07678.t1 AT4G13965 28.205 429 239 19 9 413 10 393 3.30e-22 99.0
MS.gene07678.t1 AT4G00320 28.000 375 222 11 3 342 7 368 9.29e-22 98.2
MS.gene07678.t1 AT3G59200 26.667 480 279 20 8 436 6 463 9.83e-22 98.2
MS.gene07678.t1 AT5G56440 25.943 424 265 11 9 411 2 397 1.26e-21 97.4
MS.gene07678.t1 AT2G04230 26.981 467 282 17 8 448 12 445 1.30e-21 97.4
MS.gene07678.t1 AT3G58880 29.041 365 216 12 9 346 3 351 1.69e-21 97.1
MS.gene07678.t1 AT3G58920 28.499 393 215 13 9 355 2 374 2.13e-21 97.1
MS.gene07678.t1 AT5G41830 27.494 451 260 14 3 416 7 427 2.37e-21 97.1
MS.gene07678.t1 AT5G56370 28.506 435 271 18 9 435 2 404 4.57e-21 95.5
MS.gene07678.t1 AT5G56370 28.506 435 271 18 9 435 2 404 4.57e-21 95.5
MS.gene07678.t1 AT3G56780 25.151 497 274 16 11 439 9 475 5.35e-21 95.9
MS.gene07678.t1 AT1G32375 26.984 441 261 18 9 427 2 403 7.27e-21 95.1
MS.gene07678.t1 AT1G32375 26.984 441 261 18 9 427 2 403 7.27e-21 95.1
MS.gene07678.t1 AT5G38570 25.968 439 240 15 9 433 2 369 9.05e-21 94.0
MS.gene07678.t1 AT3G58860 29.096 354 216 12 6 342 4 339 1.07e-20 94.7
MS.gene07678.t1 AT2G42720 31.405 363 198 17 9 342 2 342 1.74e-20 94.0
MS.gene07678.t1 AT5G53840 28.774 424 250 18 7 411 16 406 1.82e-20 94.0
MS.gene07678.t1 AT3G59170 28.021 389 214 12 9 342 7 384 2.08e-20 94.0
MS.gene07678.t1 AT3G59200 29.443 377 201 17 8 342 6 359 2.10e-20 92.8
MS.gene07678.t1 AT1G51370 30.923 401 213 18 7 384 17 376 2.71e-20 93.2
MS.gene07678.t1 AT3G62430 30.194 361 208 15 9 346 2 341 3.44e-20 93.2
MS.gene07678.t1 AT4G00160 28.140 430 265 16 9 423 16 416 3.92e-20 93.2
MS.gene07678.t1 AT3G58960 26.652 454 267 16 9 413 2 438 4.03e-20 93.2
MS.gene07678.t1 AT5G56400 28.000 425 247 18 9 411 33 420 4.55e-20 92.8
MS.gene07678.t1 AT3G58900 29.947 374 209 10 9 346 2 358 1.05e-19 91.7
MS.gene07678.t1 AT1G51370 37.056 197 102 7 7 198 17 196 1.07e-19 90.5
MS.gene07678.t1 AT1G06630 30.919 359 210 13 8 346 11 351 1.32e-19 90.5
MS.gene07678.t1 AT1G06630 30.919 359 210 13 8 346 11 351 1.32e-19 90.5
MS.gene07678.t1 AT5G53635 27.315 432 253 20 11 411 2 403 1.74e-19 90.9
MS.gene07678.t1 AT1G55030 25.721 416 255 15 9 408 9 386 1.97e-19 90.5
MS.gene07678.t1 AT1G55030 25.721 416 255 15 9 408 19 396 2.22e-19 90.5
MS.gene07678.t1 AT1G06630 30.919 359 210 13 8 346 11 351 2.45e-19 90.1
MS.gene07678.t1 AT1G06630 30.919 359 210 13 8 346 11 351 2.45e-19 90.1
MS.gene07678.t1 AT1G06630 30.919 359 210 13 8 346 11 351 2.45e-19 90.1
MS.gene07678.t1 AT1G06630 30.919 359 210 13 8 346 11 351 2.45e-19 90.1
MS.gene07678.t1 AT1G06630 30.919 359 210 13 8 346 20 360 2.70e-19 90.1
MS.gene07678.t1 AT3G03030 29.846 325 181 9 9 296 2 316 2.94e-19 89.0
MS.gene07678.t1 AT3G52680 26.147 436 264 13 9 423 21 419 4.13e-19 90.1
MS.gene07678.t1 AT5G22670 28.281 442 259 21 8 423 10 419 4.57e-19 89.7
MS.gene07678.t1 AT1G06630 30.919 359 210 13 8 346 11 351 5.05e-19 89.7
MS.gene07678.t1 AT3G49030 27.928 444 271 16 7 434 19 429 5.74e-19 89.4
MS.gene07678.t1 AT5G44950 27.869 427 259 18 9 411 4 405 7.08e-19 89.0
MS.gene07678.t1 AT1G69630 28.342 374 216 13 2 346 11 361 7.83e-19 89.0
MS.gene07678.t1 AT5G18770 27.312 465 283 18 9 442 24 464 8.40e-19 89.4
MS.gene07678.t1 AT1G78760 27.438 441 257 21 7 419 14 419 9.80e-19 89.0
MS.gene07678.t1 AT1G66300 26.809 470 270 19 3 433 15 449 1.09e-18 88.6
MS.gene07678.t1 AT4G15060 26.714 423 241 17 6 395 23 409 1.16e-18 88.2
MS.gene07678.t1 AT3G59240 27.887 355 221 12 9 342 8 348 1.48e-18 88.6
MS.gene07678.t1 AT5G56420 26.667 435 238 18 8 411 5 389 2.15e-18 87.4
MS.gene07678.t1 AT5G56420 26.667 435 238 18 8 411 5 389 2.15e-18 87.4
MS.gene07678.t1 AT5G56420 26.667 435 238 18 8 411 5 389 2.15e-18 87.4
MS.gene07678.t1 AT5G60610 28.155 412 260 16 9 411 2 386 2.19e-18 87.0
MS.gene07678.t1 AT5G60610 28.155 412 260 16 9 411 2 386 2.19e-18 87.0
MS.gene07678.t1 AT2G29930 29.067 375 190 18 9 346 12 347 4.36e-18 87.0
MS.gene07678.t1 AT2G29930 29.067 375 190 18 9 346 12 347 4.36e-18 87.0
MS.gene07678.t1 AT2G26030 27.107 439 251 20 9 409 4 411 5.25e-18 86.7
MS.gene07678.t1 AT3G58980 27.321 377 229 12 9 356 2 362 5.37e-18 87.0
MS.gene07678.t1 AT4G09920 29.932 294 185 10 9 295 2 281 6.25e-18 84.7
MS.gene07678.t1 AT4G09920 29.932 294 185 10 9 295 2 281 6.25e-18 84.7
MS.gene07678.t1 AT3G59250 26.402 428 250 16 9 415 7 390 7.27e-18 85.9
MS.gene07678.t1 AT2G26030 27.064 436 250 19 9 409 4 406 7.78e-18 85.9
MS.gene07678.t1 AT2G26030 27.064 436 250 19 9 409 4 406 7.78e-18 85.9
MS.gene07678.t1 AT5G44490 26.608 451 265 17 4 420 12 430 8.11e-18 85.9
MS.gene07678.t1 AT3G26930 27.896 423 245 16 8 409 20 403 8.72e-18 85.9
MS.gene07678.t1 AT4G13960 27.838 370 214 11 9 346 2 350 9.29e-18 85.9
MS.gene07678.t1 AT4G13960 27.838 370 214 11 9 346 2 350 9.29e-18 85.9
MS.gene07678.t1 AT4G09920 30.375 293 183 10 9 294 2 280 9.59e-18 84.0
MS.gene07678.t1 AT4G09920 30.375 293 183 10 9 294 2 280 9.59e-18 84.0
MS.gene07678.t1 AT4G09920 30.375 293 183 10 9 294 2 280 9.59e-18 84.0
MS.gene07678.t1 AT5G44490 26.608 451 265 17 4 420 12 430 1.22e-17 85.5
MS.gene07678.t1 AT3G62440 28.392 398 216 19 9 361 2 375 1.79e-17 85.1
MS.gene07678.t1 AT1G66310 26.386 451 282 14 4 433 14 435 1.80e-17 84.7
MS.gene07678.t1 AT5G38392 36.190 210 106 7 9 200 2 201 2.06e-17 81.3
MS.gene07678.t1 AT4G15060 28.571 308 179 11 9 294 172 460 2.62e-17 84.7
MS.gene07678.t1 AT5G22700 27.828 442 238 19 7 408 4 404 6.02e-17 83.2
MS.gene07678.t1 AT5G22700 27.828 442 238 19 7 408 4 404 6.02e-17 83.2
MS.gene07678.t1 AT5G22700 27.828 442 238 19 7 408 4 404 6.02e-17 83.2
MS.gene07678.t1 AT5G22700 27.828 442 238 19 7 408 4 404 6.02e-17 83.2
MS.gene07678.t1 AT3G58930 27.083 384 209 13 9 342 2 364 6.24e-17 83.6
MS.gene07678.t1 AT3G58930 27.083 384 209 13 9 342 2 364 6.24e-17 83.6
MS.gene07678.t1 AT3G58930 27.083 384 209 13 9 342 2 364 6.24e-17 83.6
MS.gene07678.t1 AT3G58900 30.303 330 179 10 9 300 2 318 7.05e-17 82.0
MS.gene07678.t1 AT3G58900 30.303 330 179 10 9 300 2 318 7.05e-17 82.0
MS.gene07678.t1 AT3G58900 30.061 326 179 9 9 298 2 314 7.19e-17 81.6
MS.gene07678.t1 AT3G44060 29.759 373 212 17 14 360 4 352 8.00e-17 82.8
MS.gene07678.t1 AT4G13985 28.962 366 225 13 4 346 14 367 8.05e-17 82.8
MS.gene07678.t1 AT3G59150 29.412 340 196 15 9 320 13 336 9.64e-17 82.8
MS.gene07678.t1 AT5G38386 24.069 349 202 9 9 346 2 298 1.04e-16 82.4
MS.gene07678.t1 AT5G38386 24.069 349 202 9 9 346 2 298 1.04e-16 82.4
MS.gene07678.t1 AT5G22700 27.828 442 238 19 7 408 41 441 1.26e-16 82.4
MS.gene07678.t1 AT2G42730 27.209 430 270 17 9 411 5 418 1.30e-16 82.4
MS.gene07678.t1 AT3G26930 27.089 395 228 16 36 409 3 358 1.93e-16 81.6
MS.gene07678.t1 AT1G78750 25.404 433 269 17 9 411 18 426 2.05e-16 81.6
MS.gene07678.t1 AT1G78750 25.404 433 269 17 9 411 18 426 2.05e-16 81.6
MS.gene07678.t1 AT5G38590 30.333 300 180 11 9 299 2 281 2.19e-16 79.7
MS.gene07678.t1 AT1G16930 27.130 446 243 20 9 423 15 409 2.28e-16 81.6
MS.gene07678.t1 AT1G16930 27.130 446 243 20 9 423 15 409 2.28e-16 81.6
MS.gene07678.t1 AT1G16930 27.130 446 243 20 9 423 15 409 2.28e-16 81.6
MS.gene07678.t1 AT3G56780 25.057 435 236 14 11 385 9 413 2.30e-16 81.3
MS.gene07678.t1 AT4G10420 27.586 348 206 13 99 433 1 315 2.51e-16 80.1
MS.gene07678.t1 AT1G52650 26.174 447 254 17 9 411 2 416 2.86e-16 81.3
MS.gene07678.t1 AT5G38390 24.887 442 262 18 9 412 2 411 3.25e-16 81.3
MS.gene07678.t1 AT3G59180 30.201 298 167 11 69 342 41 321 4.82e-16 80.5
MS.gene07678.t1 AT1G66290 26.389 432 260 17 4 411 24 421 7.29e-16 80.1
MS.gene07678.t1 AT5G18780 25.721 451 264 18 8 425 10 422 9.01e-16 79.7
MS.gene07678.t1 AT5G18780 25.721 451 264 18 8 425 10 422 9.01e-16 79.7
MS.gene07678.t1 AT3G42770 31.270 307 166 12 14 294 4 291 1.50e-15 79.3
MS.gene07678.t1 AT1G05080 28.140 430 250 17 8 411 12 408 3.18e-15 77.8
MS.gene07678.t1 AT5G22610 27.397 438 261 18 8 425 17 417 3.93e-15 77.8
MS.gene07678.t1 AT5G15620 28.883 367 219 13 9 353 2 348 4.34e-15 77.4
MS.gene07678.t1 AT5G22610 27.313 454 271 18 8 425 17 447 5.40e-15 77.4
MS.gene07678.t1 AT1G48400 25.693 397 212 13 9 346 10 382 1.19e-14 76.3
MS.gene07678.t1 AT5G56690 29.117 419 256 19 11 411 4 399 1.88e-14 75.5
MS.gene07678.t1 AT5G56820 24.784 464 255 17 9 442 15 414 1.92e-14 75.5
MS.gene07678.t1 AT5G22730 25.459 436 261 15 8 409 27 432 2.02e-14 75.5
MS.gene07678.t1 AT5G22730 25.459 436 261 15 8 409 27 432 2.02e-14 75.5
MS.gene07678.t1 AT5G56370 29.942 344 205 16 9 346 2 315 2.60e-14 74.3
MS.gene07678.t1 AT5G41630 26.995 426 232 17 9 377 12 415 2.69e-14 75.1
MS.gene07678.t1 AT3G58940 26.836 354 217 9 9 342 2 333 3.02e-14 75.5
MS.gene07678.t1 AT3G58940 26.836 354 217 9 9 342 2 333 3.02e-14 75.5
MS.gene07678.t1 AT3G60040 27.049 366 224 11 9 346 233 583 3.12e-14 75.9
MS.gene07678.t1 AT3G60040 27.049 366 224 11 9 346 13 363 3.30e-14 75.5
MS.gene07678.t1 AT5G18770 27.577 359 219 13 9 344 24 364 3.37e-14 74.3
MS.gene07678.t1 AT3G60040 27.049 366 224 11 9 346 232 582 3.65e-14 75.5
MS.gene07678.t1 AT3G60040 27.049 366 224 11 9 346 230 580 3.68e-14 75.5
MS.gene07678.t1 AT3G60040 27.049 366 224 11 9 346 232 582 4.17e-14 75.5
MS.gene07678.t1 AT5G22700 34.500 200 97 8 7 193 41 219 4.28e-14 74.3
MS.gene07678.t1 AT3G52680 28.732 355 195 13 9 342 21 338 5.24e-14 73.6
MS.gene07678.t1 AT3G51530 25.517 435 263 18 9 421 30 425 6.51e-14 73.9
MS.gene07678.t1 AT3G26920 24.695 328 215 11 89 408 2 305 7.82e-14 72.8
MS.gene07678.t1 AT3G26920 24.695 328 215 11 89 408 2 305 7.82e-14 72.8
MS.gene07678.t1 AT5G22720 26.906 446 253 18 4 409 18 430 1.03e-13 73.6
MS.gene07678.t1 AT3G59000 31.982 222 108 10 9 196 2 214 1.28e-13 72.4
MS.gene07678.t1 AT1G22000 26.514 479 272 24 2 440 22 460 1.64e-13 72.8
MS.gene07678.t1 AT3G49150 25.319 470 301 17 7 442 14 467 1.72e-13 72.8
MS.gene07678.t1 AT5G35995 27.297 370 205 15 9 346 5 342 1.75e-13 72.8
MS.gene07678.t1 AT5G35995 27.297 370 205 15 9 346 5 342 1.75e-13 72.8
MS.gene07678.t1 AT3G26922 31.557 244 142 11 8 241 13 241 1.93e-13 71.2
MS.gene07678.t1 AT3G26922 31.557 244 142 11 8 241 13 241 1.93e-13 71.2
MS.gene07678.t1 AT5G22660 25.566 442 252 19 8 411 12 414 2.77e-13 72.0
MS.gene07678.t1 AT3G56780 31.217 189 114 6 11 195 9 185 3.76e-13 71.2
MS.gene07678.t1 AT5G56700 29.787 329 199 16 93 413 48 352 3.98e-13 70.9
MS.gene07678.t1 AT5G18780 25.876 371 210 14 9 347 11 348 7.08e-13 70.5
MS.gene07678.t1 AT5G18780 25.876 371 210 14 9 347 11 348 7.08e-13 70.5
MS.gene07678.t1 AT5G56390 24.882 422 271 14 9 413 2 394 8.00e-13 70.5
MS.gene07678.t1 AT3G14710 25.178 421 272 14 3 409 20 411 1.29e-12 70.1
MS.gene07678.t1 AT3G59000 34.706 170 94 6 9 163 2 169 1.43e-12 70.1
MS.gene07678.t1 AT5G53640 30.688 189 117 6 7 193 20 196 1.60e-12 67.4
MS.gene07678.t1 AT5G25850 33.333 189 108 8 9 193 20 194 1.89e-12 69.7
MS.gene07678.t1 AT2G29910 27.954 347 198 14 9 321 5 333 5.59e-12 67.4
MS.gene07678.t1 AT2G29910 27.954 347 198 14 9 321 5 333 5.59e-12 67.4
MS.gene07678.t1 AT2G29910 27.954 347 198 14 9 321 5 333 5.59e-12 67.4
MS.gene07678.t1 AT2G29910 27.954 347 198 14 9 321 5 333 5.59e-12 67.4
MS.gene07678.t1 AT2G29910 28.242 347 197 15 9 321 29 357 5.82e-12 67.4
MS.gene07678.t1 AT4G10410 26.647 334 170 14 23 354 1 261 1.22e-11 65.5
MS.gene07678.t1 AT2G29930 31.418 261 122 14 109 346 1 227 2.34e-11 65.5
MS.gene07678.t1 AT5G22730 30.808 198 120 6 8 199 27 213 4.09e-11 65.1
MS.gene07678.t1 AT3G58930 25.134 374 203 12 9 346 2 334 4.79e-11 65.1
MS.gene07678.t1 AT3G58930 25.134 374 203 12 9 346 2 334 4.79e-11 65.1
MS.gene07678.t1 AT5G38590 32.836 134 88 2 9 140 2 135 4.94e-11 63.9
MS.gene07678.t1 AT3G49030 30.233 301 173 13 7 292 19 297 5.67e-11 64.7
MS.gene07678.t1 AT2G29910 30.729 192 119 6 8 196 4 184 6.70e-11 63.9
MS.gene07678.t1 AT2G29910 30.729 192 119 6 8 196 4 184 6.70e-11 63.9
MS.gene07678.t1 AT1G48400 28.417 278 160 10 9 264 10 270 9.08e-11 64.3
MS.gene07678.t1 AT3G54160 27.562 283 177 9 76 346 64 330 9.13e-11 63.9

Find 83 sgRNAs with CRISPR-Local

Find 117 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCATTGCATTTGAATTTAA+AGG 0.125528 4.1:-42561077 MS.gene07678:CDS
ATTCACAAATTTGATTTCTT+TGG 0.190993 4.1:+42562388 None:intergenic
TTCTCTTGTTGATGTTTCAT+TGG 0.230083 4.1:-42561862 MS.gene07678:CDS
AGAAATCCTCCTTACTAGTA+TGG 0.246783 4.1:-42560920 MS.gene07678:CDS
ATTGCAAAATCCTTAAGTTT+TGG 0.255923 4.1:+42561469 None:intergenic
ATCTGGTTGTCCACATTTAG+AGG 0.284140 4.1:-42562027 MS.gene07678:CDS
ACAGATCCAAGTCAAGTTTC+TGG 0.309423 4.1:+42562252 None:intergenic
TAATTCAATTGAAGATCATT+TGG 0.321337 4.1:-42560562 MS.gene07678:CDS
TCACAATTTATTATATTTAA+CGG 0.356883 4.1:-42561548 MS.gene07678:CDS
GTTTCCAACCTCATTTCTTC+GGG 0.359028 4.1:+42561148 None:intergenic
TATCCTGTAACTAGATTAAG+AGG 0.361958 4.1:+42560506 None:intergenic
ACAGAATGCTCCAAAACTTA+AGG 0.370893 4.1:-42561479 MS.gene07678:CDS
AGTTTCCAACCTCATTTCTT+CGG 0.372507 4.1:+42561147 None:intergenic
GATTATTCCTTACTTTATAT+AGG 0.375374 4.1:-42561944 MS.gene07678:CDS
GGTGGTGTTCATTGAAATCT+TGG 0.383907 4.1:+42560533 None:intergenic
TACTAATGGCTCCACCCATC+TGG 0.390927 4.1:+42561124 None:intergenic
ACTCGTGGTCTTAAAATTGC+GGG 0.408358 4.1:-42562180 MS.gene07678:CDS
AAAGTGAAGGTTGGGAATCT+TGG 0.417455 4.1:+42562442 None:intergenic
AGACATGCCGGAGTTACTAA+TGG 0.436563 4.1:+42561110 None:intergenic
GGTAATTGAAAGTGAAGGTT+GGG 0.443422 4.1:+42562434 None:intergenic
AAGTGAAAAGAGGCGTTGAT+AGG 0.448356 4.1:+42561975 None:intergenic
AAGTAGGCCTATATAAAGTA+AGG 0.476895 4.1:+42561937 None:intergenic
GTATACAAATTGTTAAAATC+CGG 0.478212 4.1:+42561771 None:intergenic
AAATTCAAATGCAATGAGAC+TGG 0.478300 4.1:+42561082 None:intergenic
TTGATTTCTTTGGACAACTC+AGG 0.483223 4.1:+42562398 None:intergenic
TGTAAGTCACTCAAGTAAGT+TGG 0.491102 4.1:-42561012 MS.gene07678:CDS
TCTTTGCATTTATAAGCGTC+CGG 0.498510 4.1:-42561790 MS.gene07678:CDS
CAAGGTCCAGAAACTTGACT+TGG 0.499109 4.1:-42562258 MS.gene07678:CDS
AATTTGTATACACTCTTGAA+AGG 0.500652 4.1:-42561759 MS.gene07678:CDS
GTAACTAGATTAAGAGGGTC+GGG 0.502456 4.1:+42560512 None:intergenic
AGAGAAAGAACTTCAAGTGC+AGG 0.507882 4.1:+42561879 None:intergenic
TGATTTCTTTGGACAACTCA+GGG 0.514750 4.1:+42562399 None:intergenic
AACTCAGGGTCTGAAATCTC+TGG 0.516045 4.1:+42562413 None:intergenic
TCTCTTCAATAAGTGAAAAG+AGG 0.519331 4.1:+42561965 None:intergenic
GAAATCCTCCTTACTAGTAT+GGG 0.519980 4.1:-42560919 MS.gene07678:intron
ACTTCGTACCCATACTAGTA+AGG 0.520038 4.1:+42560911 None:intergenic
TAGAATACCCCACAGTTTCA+CGG 0.524628 4.1:+42562090 None:intergenic
AATCAATTCCCGAAGAAATG+AGG 0.525787 4.1:-42561156 MS.gene07678:CDS
TGTACACATGTGGGTTTCAA+AGG 0.528762 4.1:-42562291 MS.gene07678:CDS
TACTTTATATAGGCCTACTT+CGG 0.536022 4.1:-42561934 MS.gene07678:CDS
CACTCGTGGTCTTAAAATTG+CGG 0.539007 4.1:-42562181 MS.gene07678:CDS
GAGAAAGAACTTCAAGTGCA+GGG 0.540413 4.1:+42561880 None:intergenic
CATGTGTTCTATCCACAAGA+TGG 0.542093 4.1:-42562478 MS.gene07678:CDS
TGTTATGCAGTTTCTCAGCA+TGG 0.542316 4.1:-42561605 MS.gene07678:intron
TTCAAAGGCATTAGATCTCA+AGG 0.542872 4.1:-42562276 MS.gene07678:CDS
AATGTCAAAACATTGGCTCT+CGG 0.545588 4.1:-42561729 MS.gene07678:CDS
TGGTAATTGAAAGTGAAGGT+TGG 0.551378 4.1:+42562433 None:intergenic
CTAAGTCTTGATAGCAACAA+AGG 0.551526 4.1:-42562329 MS.gene07678:CDS
CAACTCTTAATAACCGAAGT+AGG 0.552066 4.1:+42561921 None:intergenic
CTTCATCTCCGTGAAACTGT+GGG 0.557066 4.1:-42562098 MS.gene07678:CDS
ACTTTCTAATGTCAAAACAT+TGG 0.567332 4.1:-42561736 MS.gene07678:CDS
AATTCCCGAAGAAATGAGGT+TGG 0.567804 4.1:-42561152 MS.gene07678:CDS
TCTTCATCTCCGTGAAACTG+TGG 0.568850 4.1:-42562099 MS.gene07678:CDS
GCAGGGGCATTAATTTGTAG+TGG 0.570310 4.1:+42561897 None:intergenic
GCAGATCGACTCCCATCTTG+TGG 0.572297 4.1:+42562466 None:intergenic
ATGTGTTCTATCCACAAGAT+GGG 0.579779 4.1:-42562477 MS.gene07678:CDS
GGTGGAGCCATTAGTAACTC+CGG 0.585355 4.1:-42561117 MS.gene07678:CDS
AAATATCTGAGAATTGCAGT+TGG 0.586019 4.1:-42561522 MS.gene07678:CDS
AAAAGAAGTTCCTCTAAATG+TGG 0.586355 4.1:+42562017 None:intergenic
TGAAAAGAAGAATTGAGTGT+TGG 0.588267 4.1:+42562146 None:intergenic
TCACTCAAGTAAGTTGGAGA+AGG 0.592918 4.1:-42561006 MS.gene07678:CDS
TGTAACTAGATTAAGAGGGT+CGG 0.598827 4.1:+42560511 None:intergenic
TCACACGTGGAAAGCTTAAG+CGG 0.611156 4.1:+42562206 None:intergenic
ATGAGGTTGGAAACTCCAGA+TGG 0.616739 4.1:-42561139 MS.gene07678:CDS
GGCGTTGATAGGTAATGCAA+AGG 0.631518 4.1:+42561986 None:intergenic
GGGTATTCTATGTTTGATGA+CGG 0.632271 4.1:-42562077 MS.gene07678:CDS
TTCCACGTGTGAGTCACTCG+TGG 0.634670 4.1:-42562195 MS.gene07678:CDS
AGAAAGAACTTCAAGTGCAG+GGG 0.645719 4.1:+42561881 None:intergenic
GCCACATGATGTACACATGT+GGG 0.650684 4.1:-42562300 MS.gene07678:CDS
TGAGGTTGGAAACTCCAGAT+GGG 0.652028 4.1:-42561138 MS.gene07678:CDS
GGTTGGAAACTCCAGATGGG+TGG 0.654442 4.1:-42561135 MS.gene07678:CDS
ACATGTGTACATCATGTGGC+TGG 0.656362 4.1:+42562303 None:intergenic
AGATGAAGAATCTTTAGTGA+CGG 0.657169 4.1:+42562113 None:intergenic
ACCCACATGTGTACATCATG+TGG 0.672342 4.1:+42562299 None:intergenic
CTCGTGGTCTTAAAATTGCG+GGG 0.673910 4.1:-42562179 MS.gene07678:CDS
TCGTACCCATACTAGTAAGG+AGG 0.674938 4.1:+42560914 None:intergenic
GACCACGAGTGACTCACACG+TGG 0.682798 4.1:+42562193 None:intergenic
TTCATCTCCGTGAAACTGTG+GGG 0.684974 4.1:-42562097 MS.gene07678:CDS
AGCCACATGATGTACACATG+TGG 0.685172 4.1:-42562301 MS.gene07678:CDS
TCTCTGGTAATTGAAAGTGA+AGG 0.696256 4.1:+42562429 None:intergenic
TATGCAGTTTCTCAGCATGG+AGG 0.710400 4.1:-42561602 MS.gene07678:intron
ACTAGATTAAGAGGGTCGGG+TGG 0.718609 4.1:+42560515 None:intergenic
ATCCTGTAACTAGATTAAGA+GGG 0.720026 4.1:+42560507 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAATTAATTAAATTGTTTAT+CGG + chr4.1:42561741-42561760 None:intergenic 10.0%
!! TCACAATTTATTATATTTAA+CGG - chr4.1:42561551-42561570 MS.gene07678:CDS 10.0%
!! AAGTAAAATAGTTTAAAAGA+AGG + chr4.1:42561815-42561834 None:intergenic 15.0%
!! ATGTAATTAAAAAATTTGAG+AGG + chr4.1:42562458-42562477 None:intergenic 15.0%
!!! AATTATTCAATATTTGTTAC+AGG - chr4.1:42562510-42562529 MS.gene07678:CDS 15.0%
!!! ACTTAGTTTTCTTATATTTT+CGG + chr4.1:42560756-42560775 None:intergenic 15.0%
!! AGTATATAATAAACTCTGTA+TGG + chr4.1:42562233-42562252 None:intergenic 20.0%
!! AGTTTAAAAGAAGGTTAAAT+TGG + chr4.1:42561806-42561825 None:intergenic 20.0%
!! ATTTACTATATATATCCAGT+TGG - chr4.1:42561875-42561894 MS.gene07678:CDS 20.0%
!! GATTATTCCTTACTTTATAT+AGG - chr4.1:42561155-42561174 MS.gene07678:CDS 20.0%
!! GTATACAAATTGTTAAAATC+CGG + chr4.1:42561331-42561350 None:intergenic 20.0%
!! GTTTAAAAGAAGGTTAAATT+GGG + chr4.1:42561805-42561824 None:intergenic 20.0%
!! TAATTCAATTGAAGATCATT+TGG - chr4.1:42562537-42562556 MS.gene07678:CDS 20.0%
!! TATATATACAATTACATTCG+TGG - chr4.1:42562391-42562410 MS.gene07678:CDS 20.0%
!!! ATTCACAAATTTGATTTCTT+TGG + chr4.1:42560714-42560733 None:intergenic 20.0%
!!! GTATCTTAATATTTGTTAGT+AGG - chr4.1:42562276-42562295 MS.gene07678:CDS 20.0%
!!! TATTATTAGAATTTTCCAAC+TGG + chr4.1:42561893-42561912 None:intergenic 20.0%
!!! TTTGTAAAGTCATATTTTCT+AGG + chr4.1:42561265-42561284 None:intergenic 20.0%
! AATTTGTATACACTCTTGAA+AGG - chr4.1:42561340-42561359 MS.gene07678:intron 25.0%
! ACTTTCTAATGTCAAAACAT+TGG - chr4.1:42561363-42561382 MS.gene07678:intron 25.0%
! CTCATTGCATTTGAATTTAA+AGG - chr4.1:42562022-42562041 MS.gene07678:CDS 25.0%
! TCAAAACATAAAAACTGAGT+TGG - chr4.1:42562048-42562067 MS.gene07678:CDS 25.0%
!! ACTTAAGGATTTTGCAATTA+TGG - chr4.1:42561635-42561654 MS.gene07678:intron 25.0%
!! ATTGCAAAATCCTTAAGTTT+TGG + chr4.1:42561633-42561652 None:intergenic 25.0%
!! GATCTCAATAATTTTCTATC+TGG - chr4.1:42561055-42561074 MS.gene07678:CDS 25.0%
!! TATAAGACTCTTTTGTTGAT+AGG + chr4.1:42560598-42560617 None:intergenic 25.0%
!!! TCTGTTTTAATGAAAAGAGT+TGG - chr4.1:42562254-42562273 MS.gene07678:CDS 25.0%
!!! TTTTTTTTACATGGAAGACA+TGG - chr4.1:42561700-42561719 MS.gene07678:intron 25.0%
AAAAGAAGTTCCTCTAAATG+TGG + chr4.1:42561085-42561104 None:intergenic 30.0%
AAATATCTGAGAATTGCAGT+TGG - chr4.1:42561577-42561596 MS.gene07678:CDS 30.0%
AAATTCAAATGCAATGAGAC+TGG + chr4.1:42562020-42562039 None:intergenic 30.0%
AAGTAGGCCTATATAAAGTA+AGG + chr4.1:42561165-42561184 None:intergenic 30.0%
AATGAGAATCGAATTGCATA+TGG + chr4.1:42561465-42561484 None:intergenic 30.0%
AGATGAAGAATCTTTAGTGA+CGG + chr4.1:42560989-42561008 None:intergenic 30.0%
AGTAGAAAAAAGTTTACGCA+TGG - chr4.1:42562150-42562169 MS.gene07678:CDS 30.0%
ATGAGAATCGAATTGCATAT+GGG + chr4.1:42561464-42561483 None:intergenic 30.0%
GACATATAAAGTTGTGTTGA+TGG + chr4.1:42562362-42562381 None:intergenic 30.0%
GTAGAAAAAAGTTTACGCAT+GGG - chr4.1:42562151-42562170 MS.gene07678:CDS 30.0%
TAAAAGAAGGTTAAATTGGG+AGG + chr4.1:42561802-42561821 None:intergenic 30.0%
TACTTTATATAGGCCTACTT+CGG - chr4.1:42561165-42561184 MS.gene07678:CDS 30.0%
TAGAAAAAAGTTTACGCATG+GGG - chr4.1:42562152-42562171 MS.gene07678:CDS 30.0%
TCTCTTCAATAAGTGAAAAG+AGG + chr4.1:42561137-42561156 None:intergenic 30.0%
TGAAAAGAAGAATTGAGTGT+TGG + chr4.1:42560956-42560975 None:intergenic 30.0%
TTCTCTTGTTGATGTTTCAT+TGG - chr4.1:42561237-42561256 MS.gene07678:intron 30.0%
! AATGTCTAGAACAATAAGAG+AGG + chr4.1:42562331-42562350 None:intergenic 30.0%
! ATTTGTTAGTAGGATGTTGT+GGG - chr4.1:42562286-42562305 MS.gene07678:CDS 30.0%
! TATTTGTTAGTAGGATGTTG+TGG - chr4.1:42562285-42562304 MS.gene07678:CDS 30.0%
!! TATAAAGTTGTGTTGATGGT+CGG + chr4.1:42562358-42562377 None:intergenic 30.0%
!!! GCGGCAATAATATTTTTTCA+CGG + chr4.1:42560877-42560896 None:intergenic 30.0%
AATCAATTCCCGAAGAAATG+AGG - chr4.1:42561943-42561962 MS.gene07678:CDS 35.0%
ACAGAATGCTCCAAAACTTA+AGG - chr4.1:42561620-42561639 MS.gene07678:intron 35.0%
AGAAATCCTCCTTACTAGTA+TGG - chr4.1:42562179-42562198 MS.gene07678:CDS 35.0%
AGTTTCCAACCTCATTTCTT+CGG + chr4.1:42561955-42561974 None:intergenic 35.0%
ATGTGTTCTATCCACAAGAT+GGG - chr4.1:42560622-42560641 MS.gene07678:intron 35.0%
CAACTCTTAATAACCGAAGT+AGG + chr4.1:42561181-42561200 None:intergenic 35.0%
GAAATCCTCCTTACTAGTAT+GGG - chr4.1:42562180-42562199 MS.gene07678:CDS 35.0%
GGGTATTCTATGTTTGATGA+CGG - chr4.1:42561022-42561041 MS.gene07678:CDS 35.0%
GGTAATTGAAAGTGAAGGTT+GGG + chr4.1:42560668-42560687 None:intergenic 35.0%
TCTCTGGTAATTGAAAGTGA+AGG + chr4.1:42560673-42560692 None:intergenic 35.0%
TCTTTGCATTTATAAGCGTC+CGG - chr4.1:42561309-42561328 MS.gene07678:intron 35.0%
TGATTTCTTTGGACAACTCA+GGG + chr4.1:42560703-42560722 None:intergenic 35.0%
TGCATATGGGAGACTAAATA+TGG + chr4.1:42561451-42561470 None:intergenic 35.0%
TGGTAATTGAAAGTGAAGGT+TGG + chr4.1:42560669-42560688 None:intergenic 35.0%
TGTAAGTCACTCAAGTAAGT+TGG - chr4.1:42562087-42562106 MS.gene07678:CDS 35.0%
TTGATTTCTTTGGACAACTC+AGG + chr4.1:42560704-42560723 None:intergenic 35.0%
TTTGTTAGTAGGATGTTGTG+GGG - chr4.1:42562287-42562306 MS.gene07678:CDS 35.0%
! CTAAGTCTTGATAGCAACAA+AGG - chr4.1:42560770-42560789 MS.gene07678:intron 35.0%
! TCTTCTTTTCTTTGCAGTAG+CGG + chr4.1:42562131-42562150 None:intergenic 35.0%
!! AATGTCAAAACATTGGCTCT+CGG - chr4.1:42561370-42561389 MS.gene07678:intron 35.0%
!! TTATATTTTCGGTGCGTCTT+AGG + chr4.1:42560745-42560764 None:intergenic 35.0%
!! TTCAAAGGCATTAGATCTCA+AGG - chr4.1:42560823-42560842 MS.gene07678:intron 35.0%
AAAGTGAAGGTTGGGAATCT+TGG + chr4.1:42560660-42560679 None:intergenic 40.0%
AATTCCCGAAGAAATGAGGT+TGG - chr4.1:42561947-42561966 MS.gene07678:CDS 40.0%
ACAGATCCAAGTCAAGTTTC+TGG + chr4.1:42560850-42560869 None:intergenic 40.0%
ACTTCGTACCCATACTAGTA+AGG + chr4.1:42562191-42562210 None:intergenic 40.0%
AGAAAGAACTTCAAGTGCAG+GGG + chr4.1:42561221-42561240 None:intergenic 40.0%
AGAGAAAGAACTTCAAGTGC+AGG + chr4.1:42561223-42561242 None:intergenic 40.0%
ATCTGGTTGTCCACATTTAG+AGG - chr4.1:42561072-42561091 MS.gene07678:CDS 40.0%
CATGTGTTCTATCCACAAGA+TGG - chr4.1:42560621-42560640 MS.gene07678:intron 40.0%
GAGAAAGAACTTCAAGTGCA+GGG + chr4.1:42561222-42561241 None:intergenic 40.0%
GGTGGTGTTCATTGAAATCT+TGG + chr4.1:42562569-42562588 None:intergenic 40.0%
GTTTCCAACCTCATTTCTTC+GGG + chr4.1:42561954-42561973 None:intergenic 40.0%
TAGAATACCCCACAGTTTCA+CGG + chr4.1:42561012-42561031 None:intergenic 40.0%
TGTACACATGTGGGTTTCAA+AGG - chr4.1:42560808-42560827 MS.gene07678:intron 40.0%
TGTTATGCAGTTTCTCAGCA+TGG - chr4.1:42561494-42561513 MS.gene07678:CDS 40.0%
! ACTCGTGGTCTTAAAATTGC+GGG - chr4.1:42560919-42560938 MS.gene07678:intron 40.0%
! CACTCGTGGTCTTAAAATTG+CGG - chr4.1:42560918-42560937 MS.gene07678:intron 40.0%
! TCACTCAAGTAAGTTGGAGA+AGG - chr4.1:42562093-42562112 MS.gene07678:CDS 40.0%
!! AAGTGAAAAGAGGCGTTGAT+AGG + chr4.1:42561127-42561146 None:intergenic 40.0%
!!! AGACTGGTTTTAAGACATGC+CGG + chr4.1:42562004-42562023 None:intergenic 40.0%
ACATGTGTACATCATGTGGC+TGG + chr4.1:42560799-42560818 None:intergenic 45.0%
ACCCACATGTGTACATCATG+TGG + chr4.1:42560803-42560822 None:intergenic 45.0%
AGACATGCCGGAGTTACTAA+TGG + chr4.1:42561992-42562011 None:intergenic 45.0%
AGCCACATGATGTACACATG+TGG - chr4.1:42560798-42560817 MS.gene07678:intron 45.0%
ATGAGGTTGGAAACTCCAGA+TGG - chr4.1:42561960-42561979 MS.gene07678:CDS 45.0%
CAAGGTCCAGAAACTTGACT+TGG - chr4.1:42560841-42560860 MS.gene07678:intron 45.0%
CTTCATCTCCGTGAAACTGT+GGG - chr4.1:42561001-42561020 MS.gene07678:CDS 45.0%
GCCACATGATGTACACATGT+GGG - chr4.1:42560799-42560818 MS.gene07678:intron 45.0%
TATGCAGTTTCTCAGCATGG+AGG - chr4.1:42561497-42561516 MS.gene07678:CDS 45.0%
TCACACGTGGAAAGCTTAAG+CGG + chr4.1:42560896-42560915 None:intergenic 45.0%
TCGTACCCATACTAGTAAGG+AGG + chr4.1:42562188-42562207 None:intergenic 45.0%
TCTTCATCTCCGTGAAACTG+TGG - chr4.1:42561000-42561019 MS.gene07678:CDS 45.0%
TGAGGTTGGAAACTCCAGAT+GGG - chr4.1:42561961-42561980 MS.gene07678:CDS 45.0%
TTCATCTCCGTGAAACTGTG+GGG - chr4.1:42561002-42561021 MS.gene07678:CDS 45.0%
! AACTCAGGGTCTGAAATCTC+TGG + chr4.1:42560689-42560708 None:intergenic 45.0%
! CTCGTGGTCTTAAAATTGCG+GGG - chr4.1:42560920-42560939 MS.gene07678:CDS 45.0%
!! GCAGGGGCATTAATTTGTAG+TGG + chr4.1:42561205-42561224 None:intergenic 45.0%
!! GGCGTTGATAGGTAATGCAA+AGG + chr4.1:42561116-42561135 None:intergenic 45.0%
!!! AAAATTCTAATAATAATTTT+TGG - chr4.1:42561898-42561917 MS.gene07678:CDS 5.0%
!!! ATTTTTTATTTTTTTTTACA+TGG - chr4.1:42561691-42561710 MS.gene07678:intron 5.0%
GGTGGAGCCATTAGTAACTC+CGG - chr4.1:42561982-42562001 MS.gene07678:CDS 50.0%
GTTAGTAGGATGTTGTGGGG+TGG - chr4.1:42562290-42562309 MS.gene07678:CDS 50.0%
TACTAATGGCTCCACCCATC+TGG + chr4.1:42561978-42561997 None:intergenic 50.0%
GGTTGGAAACTCCAGATGGG+TGG - chr4.1:42561964-42561983 MS.gene07678:CDS 55.0%
TTCCACGTGTGAGTCACTCG+TGG - chr4.1:42560904-42560923 MS.gene07678:intron 55.0%
! GCAGATCGACTCCCATCTTG+TGG + chr4.1:42560636-42560655 None:intergenic 55.0%
GACCACGAGTGACTCACACG+TGG + chr4.1:42560909-42560928 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 42560521 42562600 42560521 ID=MS.gene07678
chr4.1 mRNA 42560521 42562600 42560521 ID=MS.gene07678.t1;Parent=MS.gene07678
chr4.1 exon 42561713 42562600 42561713 ID=MS.gene07678.t1.exon1;Parent=MS.gene07678.t1
chr4.1 CDS 42561713 42562600 42561713 ID=cds.MS.gene07678.t1;Parent=MS.gene07678.t1
chr4.1 exon 42561465 42561617 42561465 ID=MS.gene07678.t1.exon2;Parent=MS.gene07678.t1
chr4.1 CDS 42561465 42561617 42561465 ID=cds.MS.gene07678.t1;Parent=MS.gene07678.t1
chr4.1 exon 42560920 42561189 42560920 ID=MS.gene07678.t1.exon3;Parent=MS.gene07678.t1
chr4.1 CDS 42560920 42561189 42560920 ID=cds.MS.gene07678.t1;Parent=MS.gene07678.t1
chr4.1 exon 42560521 42560589 42560521 ID=MS.gene07678.t1.exon4;Parent=MS.gene07678.t1
chr4.1 CDS 42560521 42560589 42560521 ID=cds.MS.gene07678.t1;Parent=MS.gene07678.t1
Gene Sequence

>MS.gene07678

ATGGCGTGCTCTGATGAAAAACATGATCGATTAAGCAATCTCTCAGACGATTTGATTTGTCATATTTTGTCATTCCTATCAACAAAAGAGTCTTATAGAACATGTGTTCTATCCACAAGATGGGAGTCGATCTGCACCAAGATTCCCAACCTTCACTTTCAATTACCAGAGATTTCAGACCCTGAGTTGTCCAAAGAAATCAAATTTGTGAATGTTGCTCTCCTAAGACGCACCGAAAATATAAGAAAACTAAGTCTTGATAGCAACAAAGGCTGCCAGCCACATGATGTACACATGTGGGTTTCAAAGGCATTAGATCTCAAGGTCCAGAAACTTGACTTGGATCTGTTTCTCCGTGAAAAAATATTATTGCCGCTTAAGCTTTCCACGTGTGAGTCACTCGTGGTCTTAAAATTGCGGGGCAGAATTCAACCAACACTCAATTCTTCTTTTCATGTATATTTACCGTCACTAAAGATTCTTCATCTCCGTGAAACTGTGGGGTATTCTATGTTTGATGACGGTAAAGAGTATGATCTCAATAATTTTCTATCTGGTTGTCCACATTTAGAGGAACTTCTTTTACATGAGACCTTTGCATTACCTATCAACGCCTCTTTTCACTTATTGAAGAGATTATTCCTTACTTTATATAGGCCTACTTCGGTTATTAAGAGTTGTCCACTACAAATTAATGCCCCTGCACTTGAAGTTCTTTCTCTTGTTGATGTTTCATTGGCTCCTAGAAAATATGACTTTACAAACTTGTCAAATCTTGATGAAGCTGCTCTTTGCATTTATAAGCGTCCGGATTTTAACAATTTGTATACACTCTTGAAAGGACTTTCTAATGTCAAAACATTGGCTCTCGGTTCTAAAACTTTTCATGTAAGTTTCATAAATATTTTTCTTTTTTAATTACAAGTTCCATATTTAGTCTCCCATATGCAATTCGATTCTCATTTTATAATTCTGTTATGCAGTTTCTCAGCATGGAGGACAAACTTGACAACTTGCATCTTCTCACTTTTCACAATTTATTATATTTAACGGTTGAAATATCTGAGAATTGCAGTTGGAATATGCTCGTCAGCTTTCTACAGAATGCTCCAAAACTTAAGGATTTTGCAATTATGGTGTGTATGATGTTCTTTTAACTATATTTGCACAATTTTTTATTTTTTTTTACATGGAAGACATGGAGTTTGCAAATAAAACCGATAAACAATTTAATTAATTCTAAACAATCTATATCTGATCTATATTTGTGTAGATTTTCCTCCCAATTTAACCTTCTTTTAAACTATTTTACTTTCAATTTTATCTTTATTTACTTAATAATATAATTGAAACTATTTACTATATATATCCAGTTGGAAAATTCTAATAATAATTTTTGGTTTTCATGCAGAGAAAAATTGAAATCAATTCCCGAAGAAATGAGGTTGGAAACTCCAGATGGGTGGAGCCATTAGTAACTCCGGCATGTCTTAAAACCAGTCTCATTGCATTTGAATTTAAAGGAATTCAAAACATAAAAACTGAGTTGGACTTTACGCGATATATTGTAAGTCACTCAAGTAAGTTGGAGAAGGTAAAGATTTTCACCGCTACTGCAAAGAAAAGAAGAGTAGAAAAAAGTTTACGCATGGGGTCAAAGAAATCCTCCTTACTAGTATGGGTACGAAGTTTACACACTATCTTTTCTTCCATACAGAGTTTATTATATACTTTCTGTTTTAATGAAAAGAGTTGGTATCTTAATATTTGTTAGTAGGATGTTGTGGGGTGGTGATAGAACTTTCATCCTCTCTTATTGTTCTAGACATTAACTCCGACCATCAACACAACTTTATATGTCTTGAATTTATATATATACAATTACATTCGTGGTTGAGAATAAGACTGTTTTTGTTAAAATAAATAAATTATATCCTCTCAAATTTTTTAATTACATTAATTTTTTTTATCTTTATACTCTAATGATTTAATTATTCAATATTTGTTACAGGATATTAATTCAATTGAAGATCATTTGGATTTCTCCAAGATTTCAATGAACACCACCCGACCCTCTTAA

Protein sequence

>MS.gene07678.t1

MACSDEKHDRLSNLSDDLICHILSFLSTKESYRTCVLSTRWESICTKIPNLHFQLPEISDPELSKEIKFVNVALLRRTENIRKLSLDSNKGCQPHDVHMWVSKALDLKVQKLDLDLFLREKILLPLKLSTCESLVVLKLRGRIQPTLNSSFHVYLPSLKILHLRETVGYSMFDDGKEYDLNNFLSGCPHLEELLLHETFALPINASFHLLKRLFLTLYRPTSVIKSCPLQINAPALEVLSLVDVSLAPRKYDFTNLSNLDEAALCIYKRPDFNNLYTLLKGLSNVKTLALGSKTFHFLSMEDKLDNLHLLTFHNLLYLTVEISENCSWNMLVSFLQNAPKLKDFAIMRKIEINSRRNEVGNSRWVEPLVTPACLKTSLIAFEFKGIQNIKTELDFTRYIVSHSSKLEKVKIFTATAKKRRVEKSLRMGSKKSSLLVWDINSIEDHLDFSKISMNTTRPS