AlfalfaGEDB | MS.gene09360

M. sativa cultivar XinJiangDaYe / MS.gene09360

KEGG: -
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: PF08387.13

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene09360.t1	KEH29904.1	95.5	441	20	0	1	441	1	441	9.20E-220	772.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene09360.t1	Q9LX55	25.9	413	230	13	9	381	13	389	3.7e-20	100.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene09360.t1	A0A072UJK1	95.5	441	20	0	1	441	1	441	6.6e-220	772.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene09360	MS.gene072547	PPI
MS.gene09360	MS.gene47772	PPI
MS.gene022909	MS.gene09360	PPI
MS.gene09360	MS.gene063490	PPI
MS.gene09360	MS.gene024262	PPI
MS.gene09360	MS.gene68033	PPI
MS.gene09360	MS.gene059408	PPI
MS.gene09360	MS.gene84247	PPI
MS.gene09360	MS.gene045452	PPI
MS.gene09360	MS.gene62455	PPI
MS.gene09360	MS.gene72959	PPI
MS.gene09360	MS.gene032862	PPI
MS.gene09360	MS.gene031570	PPI
MS.gene09360	MS.gene72958	PPI
MS.gene09360	MS.gene34703	PPI
MS.gene09360	MS.gene011068	PPI
MS.gene09360	MS.gene47777	PPI
MS.gene09360	MS.gene63094	PPI
MS.gene09360	MS.gene03760	PPI
MS.gene09360	MS.gene64993	PPI
MS.gene09360	MS.gene03756	PPI
MS.gene09360	MS.gene045446	PPI
MS.gene09360	MS.gene041323	PPI
MS.gene09360	MS.gene017193	PPI
MS.gene39745	MS.gene09360	PPI
MS.gene09360	MS.gene25386	PPI
MS.gene09360	MS.gene63221	PPI
MS.gene09360	MS.gene25410	PPI
MS.gene09360	MS.gene060770	PPI
MS.gene09360	MS.gene93083	PPI
MS.gene09360	MS.gene96120	PPI
MS.gene09360	MS.gene49015	PPI
MS.gene09360	MS.gene25453	PPI
MS.gene09360	MS.gene69407	PPI
MS.gene09360	MS.gene36932	PPI
MS.gene09360	MS.gene36942	PPI
MS.gene09360	MS.gene72955	PPI
MS.gene09360	MS.gene63111	PPI
MS.gene09360	MS.gene96357	PPI
MS.gene09360	MS.gene32305	PPI
MS.gene09360	MS.gene34707	PPI
MS.gene09360	MS.gene91885	PPI
MS.gene09360	MS.gene51793	PPI
MS.gene09360	MS.gene34804	PPI
MS.gene09360	MS.gene022920	PPI
MS.gene09360	MS.gene046838	PPI
MS.gene03750	MS.gene09360	PPI
MS.gene09360	MS.gene47781	PPI
MS.gene09360	MS.gene072984	PPI
MS.gene09360	MS.gene070511	PPI
MS.gene09360	MS.gene055877	PPI
MS.gene09360	MS.gene72954	PPI
MS.gene09360	MS.gene63222	PPI
MS.gene09360	MS.gene25352	PPI
MS.gene09360	MS.gene070503	PPI
MS.gene09360	MS.gene98269	PPI
MS.gene09360	MS.gene99982	PPI
MS.gene09360	MS.gene070507	PPI
MS.gene09360	MS.gene005795	PPI
MS.gene09360	MS.gene63260	PPI
MS.gene09360	MS.gene033694	PPI
MS.gene09360	MS.gene032860	PPI
MS.gene09360	MS.gene055883	PPI
MS.gene09360	MS.gene97952	PPI
MS.gene09360	MS.gene072242	PPI
MS.gene09360	MS.gene007794	PPI
MS.gene09360	MS.gene01653	PPI
MS.gene09360	MS.gene69561	PPI
MS.gene09360	MS.gene36806	PPI
MS.gene09360	MS.gene32588	PPI
MS.gene09360	MS.gene34733	PPI
MS.gene09360	MS.gene006723	PPI
MS.gene09360	MS.gene94458	PPI
MS.gene09360	MS.gene54960	PPI
MS.gene09360	MS.gene99983	PPI
MS.gene09360	MS.gene045448	PPI
MS.gene09360	MS.gene72960	PPI
MS.gene09360	MS.gene056463	PPI
MS.gene09360	MS.gene03758	PPI
MS.gene09360	MS.gene03752	PPI
MS.gene09360	MS.gene39744	PPI
MS.gene09360	MS.gene07674	PPI
MS.gene09360	MS.gene041326	PPI
MS.gene09360	MS.gene36944	PPI
MS.gene045441	MS.gene09360	PPI
MS.gene09360	MS.gene055879	PPI
MS.gene09360	MS.gene34825	PPI
MS.gene09360	MS.gene072985	PPI
MS.gene09360	MS.gene89957	PPI
MS.gene09360	MS.gene032853	PPI
MS.gene09360	MS.gene003456	PPI
MS.gene09360	MS.gene07666	PPI
MS.gene09360	MS.gene36811	PPI
MS.gene09360	MS.gene062537	PPI
MS.gene09360	MS.gene99980	PPI
MS.gene006692	MS.gene09360	PPI
MS.gene09360	MS.gene25297	PPI
MS.gene09360	MS.gene057884	PPI
MS.gene09360	MS.gene43061	PPI
MS.gene86337	MS.gene09360	PPI
MS.gene09360	MS.gene36765	PPI
MS.gene09360	MS.gene032379	PPI
MS.gene09360	MS.gene36808	PPI
MS.gene09360	MS.gene03759	PPI
MS.gene09360	MS.gene043122	PPI
MS.gene09360	MS.gene67957	PPI
MS.gene09360	MS.gene25353	PPI
MS.gene09360	MS.gene48654	PPI
MS.gene09360	MS.gene67920	PPI
MS.gene09360	MS.gene52136	PPI
MS.gene070505	MS.gene09360	PPI
MS.gene09360	MS.gene072235	PPI
MS.gene09360	MS.gene89956	PPI
MS.gene09360	MS.gene34753	PPI
MS.gene09360	MS.gene011055	PPI
MS.gene09360	MS.gene057883	PPI
MS.gene09360	MS.gene069762	PPI
MS.gene09360	MS.gene97955	PPI
MS.gene09360	MS.gene36755	PPI
MS.gene09360	MS.gene011054	PPI
MS.gene09360	MS.gene022915	PPI
MS.gene09360	MS.gene067702	PPI
MS.gene09360	MS.gene49017	PPI
MS.gene09360	MS.gene36066	PPI
MS.gene09360	MS.gene63256	PPI
MS.gene057886	MS.gene09360	PPI
MS.gene47780	MS.gene09360	PPI
MS.gene09360	MS.gene34740	PPI
MS.gene09360	MS.gene64989	PPI
MS.gene09360	MS.gene36802	PPI
MS.gene09360	MS.gene36763	PPI
MS.gene09360	MS.gene98323	PPI
MS.gene09360	MS.gene021313	PPI
MS.gene09360	MS.gene34735	PPI
MS.gene09360	MS.gene032295	PPI
MS.gene09360	MS.gene072245	PPI
MS.gene09360	MS.gene67919	PPI
MS.gene09360	MS.gene061286	PPI
MS.gene09360	MS.gene92095	PPI
MS.gene09360	MS.gene07664	PPI
MS.gene09360	MS.gene89955	PPI
MS.gene09360	MS.gene022905	PPI
MS.gene09360	MS.gene39745	PPI
MS.gene09360	MS.gene84248	PPI
MS.gene09360	MS.gene25415	PPI
MS.gene09360	MS.gene022912	PPI
MS.gene09360	MS.gene49018	PPI
MS.gene09360	MS.gene059409	PPI
MS.gene09360	MS.gene007875	PPI
MS.gene09360	MS.gene008824	PPI
MS.gene09360	MS.gene070492	PPI
MS.gene36804	MS.gene09360	PPI
MS.gene09360	MS.gene94460	PPI
MS.gene09360	MS.gene47780	PPI
MS.gene09360	MS.gene09368	PPI
MS.gene09360	MS.gene09363	PPI
MS.gene09360	MS.gene056464	PPI
MS.gene09360	MS.gene38943	PPI
MS.gene09360	MS.gene39749	PPI
MS.gene09360	MS.gene062282	PPI
MS.gene03752	MS.gene09360	PPI
MS.gene09360	MS.gene69850	PPI
MS.gene09360	MS.gene062526	PPI
MS.gene09360	MS.gene070510	PPI
MS.gene09360	MS.gene63212	PPI
MS.gene09360	MS.gene64992	PPI
MS.gene09360	MS.gene008821	PPI
MS.gene09360	MS.gene30074	PPI
MS.gene09360	MS.gene072003	PPI
MS.gene09360	MS.gene36804	PPI
MS.gene78146	MS.gene09360	PPI
MS.gene09360	MS.gene97950	PPI
MS.gene09360	MS.gene30067	PPI
MS.gene09360	MS.gene044445	PPI
MS.gene09360	MS.gene63112	PPI
MS.gene09360	MS.gene34702	PPI
MS.gene09360	MS.gene36941	PPI
MS.gene09360	MS.gene26444	PPI
MS.gene09360	MS.gene34704	PPI
MS.gene09360	MS.gene63224	PPI
MS.gene09360	MS.gene031603	PPI
MS.gene09360	MS.gene97956	PPI
MS.gene09360	MS.gene34736	PPI
MS.gene09360	MS.gene34738	PPI
MS.gene09360	MS.gene25414	PPI
MS.gene63177	MS.gene09360	PPI
MS.gene09360	MS.gene49013	PPI
MS.gene09360	MS.gene03750	PPI
MS.gene09360	MS.gene054411	PPI
MS.gene09360	MS.gene031572	PPI
MS.gene09360	MS.gene01651	PPI
MS.gene09360	MS.gene050239	PPI
MS.gene09360	MS.gene73780	PPI
MS.gene09360	MS.gene043123	PPI
MS.gene09360	MS.gene34730	PPI
MS.gene055883	MS.gene09360	PPI
MS.gene09360	MS.gene64990	PPI
MS.gene09360	MS.gene25396	PPI
MS.gene09360	MS.gene25418	PPI
MS.gene09360	MS.gene032852	PPI
MS.gene09360	MS.gene055880	PPI
MS.gene09360	MS.gene072244	PPI
MS.gene09360	MS.gene032296	PPI
MS.gene09360	MS.gene045772	PPI
MS.gene09360	MS.gene065373	PPI
MS.gene09360	MS.gene045440	PPI
MS.gene09360	MS.gene89963	PPI
MS.gene09360	MS.gene64737	PPI
MS.gene09360	MS.gene031573	PPI
MS.gene09360	MS.gene63104	PPI
MS.gene09360	MS.gene022909	PPI
MS.gene09360	MS.gene63210	PPI
MS.gene09360	MS.gene36754	PPI
MS.gene09360	MS.gene85640	PPI
MS.gene09360	MS.gene36761	PPI
MS.gene09360	MS.gene60521	PPI
MS.gene34738	MS.gene09360	PPI
MS.gene09360	MS.gene49011	PPI
MS.gene96357	MS.gene09360	PPI
MS.gene26058	MS.gene09360	PPI
MS.gene09360	MS.gene028696	PPI
MS.gene09360	MS.gene36931	PPI
MS.gene09360	MS.gene056465	PPI
MS.gene09360	MS.gene25449	PPI
MS.gene09360	MS.gene25296	PPI
MS.gene09360	MS.gene050947	PPI
MS.gene09360	MS.gene62747	PPI
MS.gene09360	MS.gene49513	PPI
MS.gene09360	MS.gene34824	PPI
MS.gene09360	MS.gene25451	PPI
MS.gene09360	MS.gene72962	PPI
MS.gene09360	MS.gene07660	PPI
MS.gene09360	MS.gene09370	PPI
MS.gene09360	MS.gene03749	PPI
MS.gene09360	MS.gene006730	PPI
MS.gene09360	MS.gene006725	PPI
MS.gene09360	MS.gene94457	PPI
MS.gene09360	MS.gene041325	PPI
MS.gene09360	MS.gene95902	PPI
MS.gene09360	MS.gene73831	PPI
MS.gene32305	MS.gene09360	PPI
MS.gene09360	MS.gene006692	PPI
MS.gene09360	MS.gene073176	PPI
MS.gene09360	MS.gene72952	PPI
MS.gene09360	MS.gene045439	PPI
MS.gene09360	MS.gene056489	PPI
MS.gene09360	MS.gene51795	PPI
MS.gene09360	MS.gene34731	PPI
MS.gene81615	MS.gene09360	PPI
MS.gene09360	MS.gene072983	PPI
MS.gene09360	MS.gene72957	PPI
MS.gene09360	MS.gene050744	PPI
MS.gene09360	MS.gene34766	PPI
MS.gene09360	MS.gene055882	PPI
MS.gene09360	MS.gene89076	PPI
MS.gene34707	MS.gene09360	PPI
MS.gene09360	MS.gene074346	PPI
MS.gene09360	MS.gene060769	PPI
MS.gene09360	MS.gene67840	PPI
MS.gene09360	MS.gene29873	PPI
MS.gene09360	MS.gene36764	PPI
MS.gene09360	MS.gene97954	PPI
MS.gene49017	MS.gene09360	PPI
MS.gene09360	MS.gene39747	PPI
MS.gene09360	MS.gene63095	PPI
MS.gene09360	MS.gene022919	PPI
MS.gene30260	MS.gene09360	PPI
MS.gene09360	MS.gene72956	PPI
MS.gene09360	MS.gene86337	PPI
MS.gene09360	MS.gene03753	PPI
MS.gene09360	MS.gene63113	PPI
MS.gene09360	MS.gene045441	PPI
MS.gene09360	MS.gene49012	PPI
MS.gene09360	MS.gene072241	PPI
MS.gene09360	MS.gene63177	PPI
MS.gene09360	MS.gene003455	PPI
MS.gene09360	MS.gene61631	PPI
MS.gene09360	MS.gene038427	PPI
MS.gene09360	MS.gene47771	PPI
MS.gene09360	MS.gene056490	PPI
MS.gene09360	MS.gene053514	PPI
MS.gene09362	MS.gene09360	PPI
MS.gene09360	MS.gene72961	PPI
MS.gene09360	MS.gene072231	PPI
MS.gene09360	MS.gene39753	PPI
MS.gene09360	MS.gene002093	PPI
MS.gene09360	MS.gene09364	PPI
MS.gene09360	MS.gene069763	PPI
MS.gene09360	MS.gene002112	PPI
MS.gene09360	MS.gene047136	PPI
MS.gene73831	MS.gene09360	PPI
MS.gene09360	MS.gene47783	PPI
MS.gene09360	MS.gene072236	PPI
MS.gene09360	MS.gene047153	PPI
MS.gene09360	MS.gene25299	PPI
MS.gene09364	MS.gene09360	PPI
MS.gene09360	MS.gene63105	PPI
MS.gene09360	MS.gene006728	PPI
MS.gene09360	MS.gene022916	PPI
MS.gene09360	MS.gene91884	PPI
MS.gene09360	MS.gene36752	PPI
MS.gene09360	MS.gene008822	PPI
MS.gene34824	MS.gene09360	PPI
MS.gene64993	MS.gene09360	PPI
MS.gene072547	MS.gene09360	PPI
MS.gene09360	MS.gene022917	PPI
MS.gene09360	MS.gene72963	PPI
MS.gene09360	MS.gene83731	PPI
MS.gene09360	MS.gene014792	PPI
MS.gene09360	MS.gene36743	PPI
MS.gene09360	MS.gene63259	PPI
MS.gene09360	MS.gene63261	PPI
MS.gene09360	MS.gene98598	PPI
MS.gene09360	MS.gene072000	PPI
MS.gene09360	MS.gene92611	PPI
MS.gene09360	MS.gene26058	PPI
MS.gene09360	MS.gene63213	PPI
MS.gene09360	MS.gene002111	PPI
MS.gene09360	MS.gene008823	PPI
MS.gene09360	MS.gene007876	PPI
MS.gene09360	MS.gene07669	PPI
MS.gene09360	MS.gene03755	PPI
MS.gene09360	MS.gene89961	PPI
MS.gene09360	MS.gene021295	PPI
MS.gene09360	MS.gene065516	PPI
MS.gene09360	MS.gene033695	PPI
MS.gene09360	MS.gene045451	PPI
MS.gene09360	MS.gene63218	PPI
MS.gene09360	MS.gene91201	PPI
MS.gene09360	MS.gene072217	PPI
MS.gene09360	MS.gene30260	PPI
MS.gene09360	MS.gene053312	PPI
MS.gene09360	MS.gene008827	PPI
MS.gene09360	MS.gene25455	PPI
MS.gene09360	MS.gene34802	PPI
MS.gene09360	MS.gene056517	PPI
MS.gene09360	MS.gene010592	PPI
MS.gene09360	MS.gene25348	PPI
MS.gene09360	MS.gene36065	PPI
MS.gene09360	MS.gene031575	PPI
MS.gene022916	MS.gene09360	PPI
MS.gene09360	MS.gene54959	PPI
MS.gene09360	MS.gene07678	PPI
MS.gene09360	MS.gene047839	PPI
MS.gene09360	MS.gene43257	PPI
MS.gene09360	MS.gene006727	PPI
MS.gene09360	MS.gene34706	PPI
MS.gene016742	MS.gene09360	PPI
MS.gene09360	MS.gene68082	PPI
MS.gene09360	MS.gene060771	PPI
MS.gene09360	MS.gene047137	PPI
MS.gene09360	MS.gene66626	PPI
MS.gene09360	MS.gene09371	PPI
MS.gene09360	MS.gene37911	PPI
MS.gene09360	MS.gene21682	PPI
MS.gene09360	MS.gene053313	PPI
MS.gene09360	MS.gene065234	PPI
MS.gene09360	MS.gene07665	PPI
MS.gene09360	MS.gene63223	PPI
MS.gene09360	MS.gene63185	PPI
MS.gene09360	MS.gene95710	PPI
MS.gene09360	MS.gene25450	PPI
MS.gene09360	MS.gene34216	PPI
MS.gene63113	MS.gene09360	PPI
MS.gene09360	MS.gene63214	PPI
MS.gene09360	MS.gene070509	PPI
MS.gene09360	MS.gene07668	PPI
MS.gene09360	MS.gene36760	PPI
MS.gene09360	MS.gene63257	PPI
MS.gene09360	MS.gene09367	PPI
MS.gene09360	MS.gene045449	PPI
MS.gene09360	MS.gene055754	PPI
MS.gene09360	MS.gene046839	PPI
MS.gene09360	MS.gene97953	PPI
MS.gene81622	MS.gene09360	PPI
MS.gene09360	MS.gene022921	PPI
MS.gene09360	MS.gene64988	PPI
MS.gene09360	MS.gene056133	PPI
MS.gene09360	MS.gene07659	PPI
MS.gene09360	MS.gene071257	PPI
MS.gene09360	MS.gene035630	PPI
MS.gene09360	MS.gene59439	PPI
MS.gene09360	MS.gene93082	PPI
MS.gene09360	MS.gene93081	PPI
MS.gene09360	MS.gene36067	PPI
MS.gene09360	MS.gene031577	PPI
MS.gene09360	MS.gene36809	PPI
MS.gene09360	MS.gene045437	PPI
MS.gene09360	MS.gene48656	PPI
MS.gene09360	MS.gene07667	PPI
MS.gene09360	MS.gene09992	PPI
MS.gene09360	MS.gene47775	PPI
MS.gene09360	MS.gene005794	PPI
MS.gene09360	MS.gene93027	PPI
MS.gene09360	MS.gene053311	PPI
MS.gene09360	MS.gene64984	PPI
MS.gene016743	MS.gene09360	PPI
MS.gene09360	MS.gene07658	PPI
MS.gene09360	MS.gene78146	PPI
MS.gene63213	MS.gene09360	PPI
MS.gene09360	MS.gene64985	PPI
MS.gene09360	MS.gene34215	PPI
MS.gene09360	MS.gene36938	PPI
MS.gene09360	MS.gene47782	PPI
MS.gene09360	MS.gene36943	PPI
MS.gene09360	MS.gene88183	PPI
MS.gene09360	MS.gene81620	PPI
MS.gene09360	MS.gene81617	PPI
MS.gene09360	MS.gene36807	PPI
MS.gene96120	MS.gene09360	PPI
MS.gene09360	MS.gene32300	PPI
MS.gene09360	MS.gene25298	PPI
MS.gene09360	MS.gene25448	PPI
MS.gene09360	MS.gene03748	PPI
MS.gene09360	MS.gene34701	PPI
MS.gene36764	MS.gene09360	PPI
MS.gene09360	MS.gene006736	PPI
MS.gene09360	MS.gene36810	PPI
MS.gene09360	MS.gene25344	PPI
MS.gene09360	MS.gene34739	PPI
MS.gene34704	MS.gene09360	PPI
MS.gene09360	MS.gene34801	PPI
MS.gene09360	MS.gene63217	PPI
MS.gene09360	MS.gene39752	PPI
MS.gene09360	MS.gene98324	PPI
MS.gene09360	MS.gene09362	PPI
MS.gene09360	MS.gene34737	PPI
MS.gene09360	MS.gene91886	PPI
MS.gene09360	MS.gene016758	PPI
MS.gene09360	MS.gene032861	PPI
MS.gene09360	MS.gene78164	PPI
MS.gene09360	MS.gene25347	PPI
MS.gene09360	MS.gene25412	PPI
MS.gene09360	MS.gene25411	PPI
MS.gene09360	MS.gene03757	PPI
MS.gene09360	MS.gene39754	PPI
MS.gene09360	MS.gene63114	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene09360.t1	MTR_4g055990	95.692	441	19	0	1	441	1	441	0.0	850
MS.gene09360.t1	MTR_4g055990	95.692	441	19	0	1	441	1	441	0.0	850
MS.gene09360.t1	MTR_4g055580	84.354	441	63	2	1	441	92	526	0.0	727
MS.gene09360.t1	MTR_4g056070	81.900	442	72	2	1	439	1	437	0.0	719
MS.gene09360.t1	MTR_4g056020	80.726	441	43	3	1	441	1	399	0.0	697
MS.gene09360.t1	MTR_4g056040	79.365	441	79	3	1	441	1	429	0.0	693
MS.gene09360.t1	MTR_4g056030	74.830	441	69	3	1	441	1	399	0.0	640
MS.gene09360.t1	MTR_1g038710	63.087	447	117	5	1	441	11	415	8.89e-177	502
MS.gene09360.t1	MTR_1g090883	58.779	393	121	5	2	392	12	365	3.86e-143	414
MS.gene09360.t1	MTR_7g110920	56.250	320	91	3	136	441	1	285	1.33e-108	323
MS.gene09360.t1	MTR_4g093690	49.838	309	109	7	1	305	10	276	3.07e-77	242
MS.gene09360.t1	MTR_4g056010	91.000	100	9	0	105	204	1	100	4.62e-58	186
MS.gene09360.t1	MTR_4g056020	81.481	108	15	1	334	441	1	103	1.26e-55	182
MS.gene09360.t1	MTR_1g090900	53.271	214	60	4	1	211	1	177	4.91e-55	182
MS.gene09360.t1	MTR_5g084070	28.378	444	241	15	5	441	9	382	1.45e-25	108
MS.gene09360.t1	MTR_8g062270	28.378	444	260	15	9	441	16	412	5.93e-23	101
MS.gene09360.t1	MTR_8g467800	29.515	454	245	18	5	441	16	411	2.61e-22	99.4
MS.gene09360.t1	MTR_7g115270	25.734	443	222	13	9	441	12	357	6.98e-22	97.4
MS.gene09360.t1	MTR_5g080710	28.635	447	234	15	9	441	33	408	1.33e-21	97.1
MS.gene09360.t1	MTR_8g445780	27.517	447	237	14	9	438	13	389	3.85e-21	95.1
MS.gene09360.t1	MTR_8g014260	26.850	473	230	14	6	441	13	406	1.39e-20	94.0
MS.gene09360.t1	MTR_3g108560	28.378	444	194	20	6	441	17	344	9.48e-19	88.2
MS.gene09360.t1	MTR_8g468810	26.652	454	260	15	4	441	20	416	1.39e-18	88.2
MS.gene09360.t1	MTR_8g468840	26.269	453	258	18	8	441	13	408	3.69e-18	86.7
MS.gene09360.t1	MTR_1g090890	69.231	52	13	1	393	441	30	81	2.91e-17	77.8
MS.gene09360.t1	MTR_2g007400	25.390	449	222	18	9	441	12	363	3.39e-17	83.6
MS.gene09360.t1	MTR_2g083840	27.716	451	247	17	9	441	21	410	4.07e-17	83.6
MS.gene09360.t1	MTR_4g080773	28.294	463	252	21	6	441	13	422	1.69e-16	82.0
MS.gene09360.t1	MTR_4g080773	28.294	463	252	21	6	441	13	422	1.97e-16	81.6
MS.gene09360.t1	MTR_8g014160	29.143	350	181	14	2	331	34	336	2.10e-16	81.3
MS.gene09360.t1	MTR_8g467800	30.904	343	170	13	5	331	16	307	6.65e-16	79.0
MS.gene09360.t1	MTR_5g007410	25.926	432	223	18	11	441	28	363	7.88e-16	79.7
MS.gene09360.t1	MTR_8g468810	27.976	336	184	11	4	327	20	309	9.22e-16	78.2
MS.gene09360.t1	MTR_8g468810	27.976	336	184	11	4	327	20	309	9.99e-16	78.2
MS.gene09360.t1	MTR_8g058965	26.170	470	239	19	9	441	13	411	1.03e-15	79.3
MS.gene09360.t1	MTR_8g468810	27.976	336	184	11	4	327	20	309	1.81e-15	77.8
MS.gene09360.t1	MTR_8g468810	27.976	336	184	11	4	327	20	309	3.16e-15	77.4
MS.gene09360.t1	MTR_3g109982	25.207	484	255	15	4	441	8	430	2.57e-14	75.9
MS.gene09360.t1	MTR_8g062310	30.081	246	118	10	9	250	25	220	1.53e-13	72.4
MS.gene09360.t1	MTR_2g005990	28.879	232	122	7	9	232	6	202	2.20e-13	72.0
MS.gene09360.t1	MTR_3g048290	26.623	462	254	20	5	441	19	420	3.40e-12	68.6
MS.gene09360.t1	MTR_4g039440	31.081	222	108	10	9	230	34	210	5.25e-12	67.8
MS.gene09360.t1	MTR_6g044572	30.213	235	129	10	9	232	2	212	5.96e-12	67.4
MS.gene09360.t1	MTR_6g044560	30.213	235	129	10	9	232	178	388	9.12e-12	67.4
MS.gene09360.t1	MTR_1g053025	23.303	442	236	17	9	441	2	349	1.10e-11	66.6
MS.gene09360.t1	MTR_4g080787	26.271	472	247	22	6	441	13	419	1.52e-11	66.6
MS.gene09360.t1	MTR_3g108560	28.756	386	160	18	6	383	17	295	3.21e-11	64.7
MS.gene09360.t1	MTR_5g045170	29.279	222	113	9	11	230	16	195	6.05e-11	64.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene09360.t1	AT5G62970	30.649	447	252	21	9	441	2	404	3.08e-26	110
MS.gene09360.t1	AT3G59160	27.536	414	224	15	9	382	13	390	7.65e-26	109
MS.gene09360.t1	AT4G14103	29.469	414	213	15	8	396	7	366	2.75e-25	107
MS.gene09360.t1	AT3G59190	28.571	406	215	12	9	385	12	371	6.41e-25	106
MS.gene09360.t1	AT3G59190	28.954	411	216	13	9	390	12	375	2.01e-24	106
MS.gene09360.t1	AT5G38396	28.062	449	242	16	9	427	2	399	2.93e-24	105
MS.gene09360.t1	AT4G14103	28.715	397	207	13	9	381	8	352	3.27e-24	103
MS.gene09360.t1	AT4G14103	28.715	397	207	13	9	381	8	352	3.27e-24	103
MS.gene09360.t1	AT4G00320	28.713	404	225	13	3	382	7	371	7.03e-24	104
MS.gene09360.t1	AT2G26860	27.982	436	258	14	9	441	2	384	2.60e-23	101
MS.gene09360.t1	AT2G26860	27.982	436	258	14	9	441	2	384	2.60e-23	101
MS.gene09360.t1	AT5G56380	27.571	457	242	17	9	441	2	393	5.18e-23	101
MS.gene09360.t1	AT5G56380	27.571	457	242	17	9	441	2	393	5.18e-23	101
MS.gene09360.t1	AT3G50710	28.027	446	242	14	9	441	2	381	9.07e-23	100
MS.gene09360.t1	AT4G00315	27.646	463	237	19	9	441	2	396	1.23e-22	100
MS.gene09360.t1	AT4G10400	26.424	439	243	13	9	441	2	366	1.58e-22	99.4
MS.gene09360.t1	AT4G10400	26.424	439	243	13	9	441	2	366	1.58e-22	99.4
MS.gene09360.t1	AT4G10400	26.424	439	243	13	9	441	2	366	1.58e-22	99.4
MS.gene09360.t1	AT4G26340	27.354	446	239	18	9	441	2	375	2.01e-22	99.4
MS.gene09360.t1	AT5G41830	28.010	407	224	13	3	382	7	371	2.02e-22	100
MS.gene09360.t1	AT4G14096	26.794	418	228	14	8	401	7	370	2.61e-22	99.4
MS.gene09360.t1	AT4G14096	26.794	418	228	14	8	401	7	370	2.61e-22	99.4
MS.gene09360.t1	AT5G41840	27.696	408	223	10	9	382	14	383	2.63e-22	99.8
MS.gene09360.t1	AT1G58310	29.167	408	215	17	9	382	8	375	4.25e-22	99.0
MS.gene09360.t1	AT5G60610	27.964	447	234	18	9	441	2	374	7.40e-22	97.4
MS.gene09360.t1	AT5G60610	27.964	447	234	18	9	441	2	374	7.40e-22	97.4
MS.gene09360.t1	AT1G55660	26.432	454	254	18	9	441	53	447	1.78e-21	97.1
MS.gene09360.t1	AT3G03030	27.952	415	224	13	9	390	2	374	9.23e-21	94.7
MS.gene09360.t1	AT5G38590	26.802	444	240	15	9	441	2	371	2.89e-20	92.8
MS.gene09360.t1	AT3G59170	27.885	416	223	15	9	382	7	387	3.37e-20	93.2
MS.gene09360.t1	AT4G22280	30.025	393	197	15	9	385	2	332	4.21e-20	91.3
MS.gene09360.t1	AT3G59230	26.471	408	221	10	9	382	12	374	5.18e-20	92.8
MS.gene09360.t1	AT3G59210	28.536	403	215	13	5	382	3	357	5.77e-20	92.4
MS.gene09360.t1	AT3G59210	28.536	403	215	13	5	382	3	357	5.77e-20	92.4
MS.gene09360.t1	AT3G59210	28.536	403	215	13	5	382	3	357	5.77e-20	92.4
MS.gene09360.t1	AT3G59210	28.536	403	215	13	5	382	3	357	5.77e-20	92.4
MS.gene09360.t1	AT3G59210	28.536	403	215	13	5	382	3	357	5.77e-20	92.4
MS.gene09360.t1	AT4G22280	28.894	398	211	13	9	393	2	340	5.82e-20	92.0
MS.gene09360.t1	AT3G58880	26.136	440	256	13	9	427	3	394	6.13e-20	92.4
MS.gene09360.t1	AT3G58920	28.501	407	216	15	9	383	2	365	8.86e-20	92.0
MS.gene09360.t1	AT3G59200	26.150	413	217	13	8	385	6	365	1.25e-19	90.5
MS.gene09360.t1	AT4G13960	27.506	429	224	15	9	404	2	376	7.29e-19	89.0
MS.gene09360.t1	AT4G13960	27.506	429	224	15	9	404	2	376	7.29e-19	89.0
MS.gene09360.t1	AT3G59200	26.034	411	216	13	8	383	6	363	8.84e-19	89.0
MS.gene09360.t1	AT4G13965	27.477	444	237	21	9	441	10	379	2.31e-18	87.4
MS.gene09360.t1	AT5G56400	25.983	458	232	21	9	441	33	408	2.31e-18	87.4
MS.gene09360.t1	AT2G26030	26.424	439	245	16	9	426	4	385	2.92e-18	87.0
MS.gene09360.t1	AT1G51370	27.938	451	234	17	7	441	17	392	4.93e-18	86.3
MS.gene09360.t1	AT1G55660	27.246	334	184	11	9	327	53	342	1.81e-17	84.0
MS.gene09360.t1	AT1G06630	29.563	389	213	17	8	383	20	360	1.90e-17	84.3
MS.gene09360.t1	AT4G26350	24.017	458	248	16	9	441	2	384	2.26e-17	84.3
MS.gene09360.t1	AT1G06630	29.563	389	213	17	8	383	11	351	2.43e-17	84.0
MS.gene09360.t1	AT1G06630	29.563	389	213	17	8	383	11	351	2.43e-17	84.0
MS.gene09360.t1	AT1G06630	29.563	389	213	17	8	383	11	351	2.43e-17	84.0
MS.gene09360.t1	AT1G06630	29.563	389	213	17	8	383	11	351	2.43e-17	84.0
MS.gene09360.t1	AT3G58900	28.062	449	243	16	9	427	2	400	2.60e-17	84.3
MS.gene09360.t1	AT1G06630	29.563	389	213	17	8	383	11	351	4.20e-17	84.0
MS.gene09360.t1	AT3G03030	28.612	353	186	11	9	333	2	316	4.42e-17	82.4
MS.gene09360.t1	AT3G52680	26.991	452	203	16	9	426	21	379	4.52e-17	83.6
MS.gene09360.t1	AT1G78760	28.109	402	202	15	7	383	14	353	5.89e-17	83.2
MS.gene09360.t1	AT3G42770	30.816	331	175	13	14	332	4	292	6.70e-17	83.2
MS.gene09360.t1	AT3G03040	26.799	403	216	10	9	381	2	355	7.50e-17	82.8
MS.gene09360.t1	AT3G26930	27.293	447	239	17	8	441	20	393	1.39e-16	82.0
MS.gene09360.t1	AT2G26030	25.968	439	242	16	9	426	4	380	1.60e-16	81.6
MS.gene09360.t1	AT2G26030	25.968	439	242	16	9	426	4	380	1.60e-16	81.6
MS.gene09360.t1	AT2G42720	28.846	416	203	19	9	390	2	358	1.64e-16	81.6
MS.gene09360.t1	AT1G32375	26.652	454	235	17	9	441	2	378	2.00e-16	81.3
MS.gene09360.t1	AT1G32375	26.652	454	235	17	9	441	2	378	2.00e-16	81.3
MS.gene09360.t1	AT1G52650	27.139	409	205	16	9	383	2	351	2.07e-16	81.6
MS.gene09360.t1	AT3G59180	27.968	379	212	17	101	436	33	393	2.41e-16	81.3
MS.gene09360.t1	AT1G51370	28.046	435	223	16	7	426	17	376	2.60e-16	80.9
MS.gene09360.t1	AT3G59240	25.575	391	227	12	9	382	8	351	2.83e-16	81.3
MS.gene09360.t1	AT1G51370	31.739	230	106	8	7	235	17	196	5.63e-16	79.3
MS.gene09360.t1	AT5G25860	26.733	404	230	17	9	390	12	371	2.81e-15	78.2
MS.gene09360.t1	AT4G13985	26.980	404	237	15	4	391	14	375	2.87e-15	78.2
MS.gene09360.t1	AT2G42730	26.211	454	260	16	9	440	5	405	3.09e-15	77.8
MS.gene09360.t1	AT2G29930	27.960	397	203	17	9	383	12	347	3.72e-15	77.8
MS.gene09360.t1	AT2G29930	27.960	397	203	17	9	383	12	347	3.72e-15	77.8
MS.gene09360.t1	AT3G26930	26.969	419	220	17	36	441	3	348	3.75e-15	77.4
MS.gene09360.t1	AT4G10420	29.022	317	176	13	136	441	1	279	4.73e-15	76.3
MS.gene09360.t1	AT1G69630	25.679	405	224	13	2	383	11	361	5.63e-15	77.0
MS.gene09360.t1	AT5G56370	27.703	444	233	21	9	441	2	368	7.29e-15	76.6
MS.gene09360.t1	AT5G56370	27.703	444	233	21	9	441	2	368	7.29e-15	76.6
MS.gene09360.t1	AT1G78750	25.063	399	229	15	9	384	18	369	1.02e-14	76.3
MS.gene09360.t1	AT1G78750	25.063	399	229	15	9	384	18	369	1.02e-14	76.3
MS.gene09360.t1	AT1G55030	24.485	437	258	16	9	441	19	387	1.24e-14	75.9
MS.gene09360.t1	AT5G15620	27.094	406	219	13	9	393	2	351	1.35e-14	75.9
MS.gene09360.t1	AT5G22670	26.477	457	243	20	8	440	10	397	1.39e-14	75.9
MS.gene09360.t1	AT1G16930	26.147	436	226	17	9	420	15	378	1.83e-14	75.5
MS.gene09360.t1	AT1G16930	26.147	436	226	17	9	420	15	378	1.83e-14	75.5
MS.gene09360.t1	AT1G16930	26.147	436	226	17	9	420	15	378	1.83e-14	75.5
MS.gene09360.t1	AT1G55030	24.485	437	258	16	9	441	9	377	1.98e-14	75.5
MS.gene09360.t1	AT5G56440	24.444	450	257	15	9	441	2	385	2.45e-14	75.1
MS.gene09360.t1	AT5G56410	27.778	432	250	21	9	427	2	384	3.58e-14	74.7
MS.gene09360.t1	AT4G15060	26.225	408	208	18	6	386	23	364	4.02e-14	74.3
MS.gene09360.t1	AT3G49030	26.316	437	234	17	7	429	19	381	5.61e-14	73.9
MS.gene09360.t1	AT3G58900	29.261	352	185	12	9	335	2	314	6.66e-14	72.8
MS.gene09360.t1	AT3G58900	29.609	358	182	13	9	337	2	318	7.49e-14	72.8
MS.gene09360.t1	AT3G58900	29.609	358	182	13	9	337	2	318	7.49e-14	72.8
MS.gene09360.t1	AT5G35995	25.245	408	223	16	8	390	4	354	1.27e-13	72.8
MS.gene09360.t1	AT5G35995	25.245	408	223	16	8	390	4	354	1.27e-13	72.8
MS.gene09360.t1	AT3G26920	25.545	321	204	10	128	441	4	296	1.58e-13	72.0
MS.gene09360.t1	AT3G26920	25.545	321	204	10	128	441	4	296	1.58e-13	72.0
MS.gene09360.t1	AT5G22700	25.275	455	228	19	7	427	4	380	2.17e-13	72.0
MS.gene09360.t1	AT5G22700	25.275	455	228	19	7	427	4	380	2.17e-13	72.0
MS.gene09360.t1	AT5G22700	25.275	455	228	19	7	427	4	380	2.17e-13	72.0
MS.gene09360.t1	AT5G22700	25.275	455	228	19	7	427	4	380	2.17e-13	72.0
MS.gene09360.t1	AT5G53635	26.222	450	228	20	11	427	2	380	2.43e-13	72.0
MS.gene09360.t1	AT5G22700	25.275	455	228	19	7	427	41	417	2.49e-13	72.0
MS.gene09360.t1	AT5G56700	31.378	341	192	18	112	441	29	338	2.81e-13	71.2
MS.gene09360.t1	AT1G66310	27.068	399	218	16	4	384	14	357	3.30e-13	71.6
MS.gene09360.t1	AT1G48400	25.057	435	225	13	8	390	9	394	4.34e-13	71.2
MS.gene09360.t1	AT3G60040	25.326	383	246	12	9	383	232	582	7.92e-13	70.9
MS.gene09360.t1	AT5G38570	25.959	443	205	17	9	441	2	331	7.97e-13	70.1
MS.gene09360.t1	AT3G60040	25.326	383	246	12	9	383	230	580	8.19e-13	70.9
MS.gene09360.t1	AT3G60040	25.326	383	246	12	9	383	13	363	8.83e-13	70.9
MS.gene09360.t1	AT4G09920	26.364	330	187	10	9	332	2	281	9.34e-13	68.9
MS.gene09360.t1	AT4G09920	26.364	330	187	10	9	332	2	281	9.34e-13	68.9
MS.gene09360.t1	AT4G09920	26.364	330	187	10	9	332	2	281	9.34e-13	68.9
MS.gene09360.t1	AT3G60040	25.326	383	246	12	9	383	232	582	9.92e-13	70.9
MS.gene09360.t1	AT3G60040	25.326	383	246	12	9	383	233	583	1.00e-12	70.9
MS.gene09360.t1	AT4G09920	26.829	328	184	11	9	330	2	279	1.04e-12	69.3
MS.gene09360.t1	AT4G09920	26.829	328	184	11	9	330	2	279	1.04e-12	69.3
MS.gene09360.t1	AT5G38392	30.932	236	118	7	9	236	2	200	2.40e-12	66.6
MS.gene09360.t1	AT2G29930	33.333	243	110	14	163	383	15	227	4.08e-12	67.8
MS.gene09360.t1	AT1G13780	25.112	446	249	19	9	428	10	396	7.45e-12	67.4
MS.gene09360.t1	AT1G05080	26.813	455	242	19	8	441	12	396	8.89e-12	67.0
MS.gene09360.t1	AT3G54160	28.094	299	181	11	104	383	47	330	6.32e-11	64.3

Find 82 sgRNAs with CRISPR-Local

Find 102 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTCATTACATTTGAATTTAA+AGG	0.124626	4.2:+47647015	MS.gene09360:CDS
TAAAGATTTGATTTCTTCTT+TGG	0.180797	4.2:-47645536	None:intergenic
CTAAGGCTTGATAGCGAAAA+AGG	0.263082	4.2:+47645706	MS.gene09360:CDS
ATTGCAAGATCCTTAAGTTT+TGG	0.285282	4.2:-47646566	None:intergenic
CTATATTCTCGTAGCGTCTT+TGG	0.295013	4.2:-47645570	None:intergenic
GCAGATCGACTCCCATCTTT+TGG	0.302315	4.2:-47645458	None:intergenic
TCTATCTGGTTGTCCACATT+TGG	0.307537	4.2:+47646005	MS.gene09360:CDS
TATATTCTCGTAGCGTCTTT+GGG	0.345443	4.2:-47645569	None:intergenic
GTTTCCAACCTCATCTCTTC+GGG	0.387038	4.2:-47646944	None:intergenic
ACTCGTGGTCTTAAAATTGC+GGG	0.408358	4.2:+47645855	MS.gene09360:CDS
AAAGTGAAGGTTGGGAATCT+TGG	0.417455	4.2:-47645482	None:intergenic
AGTTTCCAACCTCATCTCTT+CGG	0.419308	4.2:-47646945	None:intergenic
ACAGATCCAAGTCAAGTTCC+TGG	0.422138	4.2:-47645783	None:intergenic
ACAGAATGCTCCAAAACTTA+AGG	0.424972	4.2:+47646556	MS.gene09360:CDS
ATCTGGTTGTCCACATTTGG+AGG	0.433975	4.2:+47646008	MS.gene09360:CDS
ATGAGGTTGGAAACTCTAGA+TGG	0.434129	4.2:+47646953	MS.gene09360:CDS
CAAAGACGCTACGAGAATAT+AGG	0.436114	4.2:+47645571	MS.gene09360:CDS
GGTAATTGAAAGTGAAGGTT+GGG	0.443422	4.2:-47645490	None:intergenic
CAAGGTCCAGGAACTTGACT+TGG	0.457085	4.2:+47645777	MS.gene09360:CDS
ATTTCTTCTTTGGACATCAC+GGG	0.458271	4.2:-47645526	None:intergenic
ACTAATACTTGACAGTAAGA+TGG	0.466673	4.2:+47645597	MS.gene09360:CDS
AAATTCAAATGTAATGAGAC+TGG	0.466724	4.2:-47647010	None:intergenic
CATGTGTTCTATCCAAAAGA+TGG	0.467948	4.2:+47645446	MS.gene09360:CDS
GTGACTCACACGTGGAAAGC+TGG	0.470578	4.2:-47645834	None:intergenic
TAGAATACGCCACAGTTTCA+CGG	0.471822	4.2:-47645945	None:intergenic
TCAAAACATTAAAACTGAGT+TGG	0.477665	4.2:+47647041	MS.gene09360:CDS
GTATACAAATTGTTAAAATC+CGG	0.478212	4.2:-47646264	None:intergenic
TCTTTGCATTTGCAAGCGTC+CGG	0.481989	4.2:+47646245	MS.gene09360:CDS
GCCACATGATGTACACTTGT+GGG	0.485379	4.2:+47645627	MS.gene09360:CDS
AAGGATCTTGCAATTGCGGT+TGG	0.485603	4.2:+47646575	MS.gene09360:CDS
AAGTAGGCATATATAACAAA+AGG	0.493857	4.2:-47646098	None:intergenic
ACTTAAGGATCTTGCAATTG+CGG	0.496044	4.2:+47646571	MS.gene09360:CDS
GGCATTAGATCTCAAGGTCC+AGG	0.496808	4.2:+47645765	MS.gene09360:CDS
AATTTGTATACACTCTTGAA+AGG	0.500652	4.2:+47646276	MS.gene09360:CDS
TGTACACTTGTGGGTTTCAA+AGG	0.503354	4.2:+47645636	MS.gene09360:CDS
CTAATACTTGACAGTAAGAT+GGG	0.504263	4.2:+47645598	MS.gene09360:CDS
TATGAAGAACTTCAAGTGAC+GGG	0.519558	4.2:-47646155	None:intergenic
TCTCTTCAATAAGTGAAAAG+AGG	0.524063	4.2:-47646070	None:intergenic
ATCACGGGGTCTGAAATCTC+TGG	0.527272	4.2:-47645511	None:intergenic
TGTACACATGTGGGTTTCAA+AGG	0.528762	4.2:+47645744	MS.gene09360:CDS
GATTTCTTCTTTGGACATCA+CGG	0.535967	4.2:-47645527	None:intergenic
CCGAAAATATAAGAAAACTA+AGG	0.538047	4.2:+47645689	MS.gene09360:CDS
CACTCGTGGTCTTAAAATTG+CGG	0.539007	4.2:+47645854	MS.gene09360:CDS
TTCAAAGGCATTAGATCTCA+AGG	0.542872	4.2:+47645759	MS.gene09360:CDS
AATGTCAAAACATTGGCTCT+CGG	0.545588	4.2:+47646306	MS.gene09360:CDS
TGGTAATTGAAAGTGAAGGT+TGG	0.551378	4.2:-47645491	None:intergenic
TGTTATGCAGTTTCTCAGCA+TGG	0.553413	4.2:+47646430	MS.gene09360:intron
ATGTGTTCTATCCAAAAGAT+GGG	0.563690	4.2:+47645447	MS.gene09360:CDS
GACGGGGCATTAATTTGTAG+TGG	0.566180	4.2:-47646138	None:intergenic
ACTTTCTAATGTCAAAACAT+TGG	0.567332	4.2:+47646299	MS.gene09360:CDS
AAATATCTGAGAATTGCAGT+TGG	0.586019	4.2:+47646513	MS.gene09360:CDS
AATTCCCGAAGAGATGAGGT+TGG	0.586261	4.2:+47646940	MS.gene09360:CDS
CAACACTTAATAGAAGAAGT+AGG	0.587492	4.2:-47646114	None:intergenic
TGAAAAGAAGAATTGAGTGT+TGG	0.588267	4.2:-47645889	None:intergenic
AGACTGGTTGTAAGACATGC+CGG	0.589947	4.2:-47646994	None:intergenic
AAGTGAAAAGAGGTGTTGAT+CGG	0.590271	4.2:-47646060	None:intergenic
AAGAGCAGCTTCATCAAGAG+TGG	0.591791	4.2:-47646226	None:intergenic
ATATGAAGAACTTCAAGTGA+CGG	0.594331	4.2:-47646156	None:intergenic
GGTGGAGCCATCAGTAACTC+CGG	0.595318	4.2:+47646975	MS.gene09360:CDS
TCACACGTGGAAAGCTGGAG+CGG	0.598731	4.2:-47645829	None:intergenic
AAAAGAAGTTCCTCCAAATG+TGG	0.603065	4.2:-47646018	None:intergenic
ACAAGTGTACATCATGTGGC+TGG	0.606670	4.2:-47645624	None:intergenic
AATCAATTCCCGAAGAGATG+AGG	0.608247	4.2:+47646936	MS.gene09360:CDS
AGACATGCCGGAGTTACTGA+TGG	0.614504	4.2:-47646982	None:intergenic
TGAGGTTGGAAACTCTAGAT+GGG	0.616468	4.2:+47646954	MS.gene09360:CDS
GCGTATTCTACGTTTGATGA+CGG	0.624876	4.2:+47645958	MS.gene09360:CDS
TCTTCATCTCCGTGAAACTG+TGG	0.632446	4.2:+47645936	MS.gene09360:CDS
TTCCACGTGTGAGTCACTCG+TGG	0.634670	4.2:+47645840	MS.gene09360:CDS
GGTGTTGATCGGTAATGCAA+AGG	0.638827	4.2:-47646049	None:intergenic
AGCCACATGATGTACACTTG+TGG	0.639873	4.2:+47645626	MS.gene09360:CDS
ACATGTGTACATCATGTGAC+TGG	0.652666	4.2:-47645732	None:intergenic
GGTTGGAAACTCTAGATGGG+TGG	0.653900	4.2:+47646957	MS.gene09360:CDS
AGATGAAGAATCTTTAGTGA+CGG	0.657169	4.2:-47645922	None:intergenic
TTTCTTCTTTGGACATCACG+GGG	0.666222	4.2:-47645525	None:intergenic
GTCACATGATGTACACATGT+GGG	0.678429	4.2:+47645735	MS.gene09360:CDS
CTCGTGGTCTTAAAATTGCG+GGG	0.678642	4.2:+47645856	MS.gene09360:CDS
GACCACGAGTGACTCACACG+TGG	0.682798	4.2:-47645842	None:intergenic
ACCCACAAGTGTACATCATG+TGG	0.692380	4.2:-47645628	None:intergenic
TCTCTGGTAATTGAAAGTGA+AGG	0.696256	4.2:-47645495	None:intergenic
TATGCAGTTTCTCAGCATGG+AGG	0.703511	4.2:+47646433	MS.gene09360:intron
AGTCACATGATGTACACATG+TGG	0.706369	4.2:+47645734	MS.gene09360:CDS
ATGAAGAACTTCAAGTGACG+GGG	0.715969	4.2:-47646154	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AAAATACAAATGTTAATTTT+TGG	+	chr4.2:47646891-47646910	MS.gene09360:intron	10.0%
!!!	GAATTAATTAATTTGTTTAA+CGG	-	chr4.2:47646737-47646756	None:intergenic	10.0%
!!	AGATAAAATTGTAAGTAAAA+TGG	-	chr4.2:47646823-47646842	None:intergenic	15.0%
!!	AAGTAAAATGGTTTAAAAGA+AGG	-	chr4.2:47646811-47646830	None:intergenic	20.0%
!!	AATGAGAATAAAATTGCATA+TGG	-	chr4.2:47646401-47646420	None:intergenic	20.0%
!!	ATGAGAATAAAATTGCATAT+GGG	-	chr4.2:47646400-47646419	None:intergenic	20.0%
!!	CTCATTACATTTGAATTTAA+AGG	+	chr4.2:47647015-47647034	MS.gene09360:CDS	20.0%
!!	GTATACAAATTGTTAAAATC+CGG	-	chr4.2:47646267-47646286	None:intergenic	20.0%
!!!	CCTTAGTTTTCTTATATTTT+CGG	-	chr4.2:47645692-47645711	None:intergenic	20.0%
!!!	TAAAGATTTGATTTCTTCTT+TGG	-	chr4.2:47645539-47645558	None:intergenic	20.0%
!	AAATTCAAATGTAATGAGAC+TGG	-	chr4.2:47647013-47647032	None:intergenic	25.0%
!	AAGTAGGCATATATAACAAA+AGG	-	chr4.2:47646101-47646120	None:intergenic	25.0%
!	AATTTGTATACACTCTTGAA+AGG	+	chr4.2:47646276-47646295	MS.gene09360:CDS	25.0%
!	ACTATATGCTATATATCAGT+TGG	+	chr4.2:47646868-47646887	MS.gene09360:intron	25.0%
!	ACTTTCTAATGTCAAAACAT+TGG	+	chr4.2:47646299-47646318	MS.gene09360:CDS	25.0%
!	CCGAAAATATAAGAAAACTA+AGG	+	chr4.2:47645689-47645708	MS.gene09360:CDS	25.0%
!	TAAAAGAAGGTTAAATTGCT+AGG	-	chr4.2:47646798-47646817	None:intergenic	25.0%
!	TCAAAACATTAAAACTGAGT+TGG	+	chr4.2:47647041-47647060	MS.gene09360:CDS	25.0%
!!	GATCTCAATAATTTTCTATC+TGG	+	chr4.2:47645991-47646010	MS.gene09360:CDS	25.0%
!!	TATAAGACTCTTTTGTTGAT+AGG	-	chr4.2:47645423-47645442	None:intergenic	25.0%
!!	TTTGTGAAGTCATATTTTCT+AGG	-	chr4.2:47646201-47646220	None:intergenic	25.0%
!!!	TAATTTTTGGTTTACATGCA+GGG	+	chr4.2:47646904-47646923	MS.gene09360:intron	25.0%
!!!	TTAATTTTTGGTTTACATGC+AGG	+	chr4.2:47646903-47646922	MS.gene09360:intron	25.0%
	AAATATCTGAGAATTGCAGT+TGG	+	chr4.2:47646513-47646532	MS.gene09360:CDS	30.0%
	AAGACCTAGTAAAAGATACA+TGG	+	chr4.2:47646696-47646715	MS.gene09360:intron	30.0%
	ACTAATACTTGACAGTAAGA+TGG	+	chr4.2:47645597-47645616	MS.gene09360:CDS	30.0%
	AGATGAAGAATCTTTAGTGA+CGG	-	chr4.2:47645925-47645944	None:intergenic	30.0%
	ATATGAAGAACTTCAAGTGA+CGG	-	chr4.2:47646159-47646178	None:intergenic	30.0%
	ATGTGTTCTATCCAAAAGAT+GGG	+	chr4.2:47645447-47645466	MS.gene09360:CDS	30.0%
	CAACACTTAATAGAAGAAGT+AGG	-	chr4.2:47646117-47646136	None:intergenic	30.0%
	CTAATACTTGACAGTAAGAT+GGG	+	chr4.2:47645598-47645617	MS.gene09360:CDS	30.0%
	TCTCTTCAATAAGTGAAAAG+AGG	-	chr4.2:47646073-47646092	None:intergenic	30.0%
	TGAAAAGAAGAATTGAGTGT+TGG	-	chr4.2:47645892-47645911	None:intergenic	30.0%
!	AACTCCATGTATCTTTTACT+AGG	-	chr4.2:47646703-47646722	None:intergenic	30.0%
!	ATTGCAAGATCCTTAAGTTT+TGG	-	chr4.2:47646569-47646588	None:intergenic	30.0%
	AAAAGAAGTTCCTCCAAATG+TGG	-	chr4.2:47646021-47646040	None:intergenic	35.0%
	AACACAAGAAGCTGAAAATC+TGG	+	chr4.2:47646660-47646679	MS.gene09360:intron	35.0%
	ACAGAATGCTCCAAAACTTA+AGG	+	chr4.2:47646556-47646575	MS.gene09360:CDS	35.0%
	ACTTAAGGATCTTGCAATTG+CGG	+	chr4.2:47646571-47646590	MS.gene09360:CDS	35.0%
	ATTTCTTCTTTGGACATCAC+GGG	-	chr4.2:47645529-47645548	None:intergenic	35.0%
	CATGTGTTCTATCCAAAAGA+TGG	+	chr4.2:47645446-47645465	MS.gene09360:CDS	35.0%
	GATTTCTTCTTTGGACATCA+CGG	-	chr4.2:47645530-47645549	None:intergenic	35.0%
	GGTAATTGAAAGTGAAGGTT+GGG	-	chr4.2:47645493-47645512	None:intergenic	35.0%
	TATATTCTCGTAGCGTCTTT+GGG	-	chr4.2:47645572-47645591	None:intergenic	35.0%
	TATGAAGAACTTCAAGTGAC+GGG	-	chr4.2:47646158-47646177	None:intergenic	35.0%
	TCTCTGGTAATTGAAAGTGA+AGG	-	chr4.2:47645498-47645517	None:intergenic	35.0%
	TGCATATGGGAGACTAAATA+TGG	-	chr4.2:47646387-47646406	None:intergenic	35.0%
	TGGTAATTGAAAGTGAAGGT+TGG	-	chr4.2:47645494-47645513	None:intergenic	35.0%
!!	AAGTGAAAAGAGGTGTTGAT+CGG	-	chr4.2:47646063-47646082	None:intergenic	35.0%
!!	AATGTCAAAACATTGGCTCT+CGG	+	chr4.2:47646306-47646325	MS.gene09360:CDS	35.0%
!!	TTATATTTTCGGTGCGTCTT+AGG	-	chr4.2:47645681-47645700	None:intergenic	35.0%
!!	TTCAAAGGCATTAGATCTCA+AGG	+	chr4.2:47645759-47645778	MS.gene09360:CDS	35.0%
!!!	GCGGCAATAAAACTTTTTCA+TGG	-	chr4.2:47645813-47645832	None:intergenic	35.0%
	AAAGTGAAGGTTGGGAATCT+TGG	-	chr4.2:47645485-47645504	None:intergenic	40.0%
	AATCAATTCCCGAAGAGATG+AGG	+	chr4.2:47646936-47646955	MS.gene09360:CDS	40.0%
	ACATGTGTACATCATGTGAC+TGG	-	chr4.2:47645735-47645754	None:intergenic	40.0%
	AGTCACATGATGTACACATG+TGG	+	chr4.2:47645734-47645753	MS.gene09360:CDS	40.0%
	AGTTTCCAACCTCATCTCTT+CGG	-	chr4.2:47646948-47646967	None:intergenic	40.0%
	ATGAAGAACTTCAAGTGACG+GGG	-	chr4.2:47646157-47646176	None:intergenic	40.0%
	ATGAGGTTGGAAACTCTAGA+TGG	+	chr4.2:47646953-47646972	MS.gene09360:CDS	40.0%
	CAAAGACGCTACGAGAATAT+AGG	+	chr4.2:47645571-47645590	MS.gene09360:CDS	40.0%
	CTATATTCTCGTAGCGTCTT+TGG	-	chr4.2:47645573-47645592	None:intergenic	40.0%
	GCGTATTCTACGTTTGATGA+CGG	+	chr4.2:47645958-47645977	MS.gene09360:CDS	40.0%
	GTCACATGATGTACACATGT+GGG	+	chr4.2:47645735-47645754	MS.gene09360:CDS	40.0%
	TAGAATACGCCACAGTTTCA+CGG	-	chr4.2:47645948-47645967	None:intergenic	40.0%
	TCTATCTGGTTGTCCACATT+TGG	+	chr4.2:47646005-47646024	MS.gene09360:CDS	40.0%
	TGAGGTTGGAAACTCTAGAT+GGG	+	chr4.2:47646954-47646973	MS.gene09360:CDS	40.0%
	TGTACACATGTGGGTTTCAA+AGG	+	chr4.2:47645744-47645763	MS.gene09360:CDS	40.0%
	TGTACACTTGTGGGTTTCAA+AGG	+	chr4.2:47645636-47645655	MS.gene09360:CDS	40.0%
	TGTTATGCAGTTTCTCAGCA+TGG	+	chr4.2:47646430-47646449	MS.gene09360:intron	40.0%
	TTTCTTCTTTGGACATCACG+GGG	-	chr4.2:47645528-47645547	None:intergenic	40.0%
!	ACTCGTGGTCTTAAAATTGC+GGG	+	chr4.2:47645855-47645874	MS.gene09360:CDS	40.0%
!	CACTCGTGGTCTTAAAATTG+CGG	+	chr4.2:47645854-47645873	MS.gene09360:CDS	40.0%
!!	CTAAGGCTTGATAGCGAAAA+AGG	+	chr4.2:47645706-47645725	MS.gene09360:CDS	40.0%
	AAGAGCAGCTTCATCAAGAG+TGG	-	chr4.2:47646229-47646248	None:intergenic	45.0%
	AAGGATCTTGCAATTGCGGT+TGG	+	chr4.2:47646575-47646594	MS.gene09360:CDS	45.0%
	AATTCCCGAAGAGATGAGGT+TGG	+	chr4.2:47646940-47646959	MS.gene09360:CDS	45.0%
	ACAAGTGTACATCATGTGGC+TGG	-	chr4.2:47645627-47645646	None:intergenic	45.0%
	ACAGATCCAAGTCAAGTTCC+TGG	-	chr4.2:47645786-47645805	None:intergenic	45.0%
	ACCCACAAGTGTACATCATG+TGG	-	chr4.2:47645631-47645650	None:intergenic	45.0%
	AGCCACATGATGTACACTTG+TGG	+	chr4.2:47645626-47645645	MS.gene09360:CDS	45.0%
	ATCTGGTTGTCCACATTTGG+AGG	+	chr4.2:47646008-47646027	MS.gene09360:CDS	45.0%
	GCCACATGATGTACACTTGT+GGG	+	chr4.2:47645627-47645646	MS.gene09360:CDS	45.0%
	GTTTCCAACCTCATCTCTTC+GGG	-	chr4.2:47646947-47646966	None:intergenic	45.0%
	TATGCAGTTTCTCAGCATGG+AGG	+	chr4.2:47646433-47646452	MS.gene09360:intron	45.0%
	TCTTCATCTCCGTGAAACTG+TGG	+	chr4.2:47645936-47645955	MS.gene09360:CDS	45.0%
	TCTTTGCATTTGCAAGCGTC+CGG	+	chr4.2:47646245-47646264	MS.gene09360:CDS	45.0%
!	AGACTGGTTGTAAGACATGC+CGG	-	chr4.2:47646997-47647016	None:intergenic	45.0%
!	CTCGTGGTCTTAAAATTGCG+GGG	+	chr4.2:47645856-47645875	MS.gene09360:CDS	45.0%
!!	GACGGGGCATTAATTTGTAG+TGG	-	chr4.2:47646141-47646160	None:intergenic	45.0%
!!	GGTGTTGATCGGTAATGCAA+AGG	-	chr4.2:47646052-47646071	None:intergenic	45.0%
	AGACATGCCGGAGTTACTGA+TGG	-	chr4.2:47646985-47647004	None:intergenic	50.0%
	CAAGGTCCAGGAACTTGACT+TGG	+	chr4.2:47645777-47645796	MS.gene09360:CDS	50.0%
	GGCATTAGATCTCAAGGTCC+AGG	+	chr4.2:47645765-47645784	MS.gene09360:CDS	50.0%
	GGTTGGAAACTCTAGATGGG+TGG	+	chr4.2:47646957-47646976	MS.gene09360:CDS	50.0%
!	ATCACGGGGTCTGAAATCTC+TGG	-	chr4.2:47645514-47645533	None:intergenic	50.0%
!!	GCAGATCGACTCCCATCTTT+TGG	-	chr4.2:47645461-47645480	None:intergenic	50.0%
	GGTGGAGCCATCAGTAACTC+CGG	+	chr4.2:47646975-47646994	MS.gene09360:CDS	55.0%
	GTGACTCACACGTGGAAAGC+TGG	-	chr4.2:47645837-47645856	None:intergenic	55.0%
	TCACACGTGGAAAGCTGGAG+CGG	-	chr4.2:47645832-47645851	None:intergenic	55.0%
	TTCCACGTGTGAGTCACTCG+TGG	+	chr4.2:47645840-47645859	MS.gene09360:CDS	55.0%
	GACCACGAGTGACTCACACG+TGG	-	chr4.2:47645845-47645864	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	47645346	47647080	47645346	ID=MS.gene09360
chr4.2	mRNA	47645346	47647080	47645346	ID=MS.gene09360.t1;Parent=MS.gene09360
chr4.2	exon	47645346	47646344	47645346	ID=MS.gene09360.t1.exon1;Parent=MS.gene09360.t1
chr4.2	CDS	47645346	47646344	47645346	ID=cds.MS.gene09360.t1;Parent=MS.gene09360.t1
chr4.2	exon	47646440	47646607	47646440	ID=MS.gene09360.t1.exon2;Parent=MS.gene09360.t1
chr4.2	CDS	47646440	47646607	47646440	ID=cds.MS.gene09360.t1;Parent=MS.gene09360.t1
chr4.2	exon	47646925	47647080	47646925	ID=MS.gene09360.t1.exon3;Parent=MS.gene09360.t1
chr4.2	CDS	47646925	47647080	47646925	ID=cds.MS.gene09360.t1;Parent=MS.gene09360.t1

Gene Sequence

>MS.gene09360

ATGGCGTGCTCTGATGAAAAACATGATCGATTAAGCAATCTCTCAGACGATTTGATTTGTCATATTTGTTCGTTCCTATCAACAAAAGAGTCTTATAGAACATGTGTTCTATCCAAAAGATGGGAGTCGATCTGCACCAAGATTCCCAACCTTCACTTTCAATTACCAGAGATTTCAGACCCCGTGATGTCCAAAGAAGAAATCAAATCTTTACAGCTTGCTTCCCAAAGACGCTACGAGAATATAGGCAAACTAATACTTGACAGTAAGATGGGCTGCCAGCCACATGATGTACACTTGTGGGTTTCAAAGGCATTTGTAAATTTTGCTCTCCTAAGACGCACCGAAAATATAAGAAAACTAAGGCTTGATAGCGAAAAAGGCTGCCAGTCACATGATGTACACATGTGGGTTTCAAAGGCATTAGATCTCAAGGTCCAGGAACTTGACTTGGATCTGTTTCTCCATGAAAAAGTTTTATTGCCGCTCCAGCTTTCCACGTGTGAGTCACTCGTGGTCTTAAAATTGCGGGGTAGAATTCAACCAACACTCAATTCTTCTTTTCATGTATATTTACCGTCACTAAAGATTCTTCATCTCCGTGAAACTGTGGCGTATTCTACGTTTGATGACGGTAAAGAGTATGATCTCAATAATTTTCTATCTGGTTGTCCACATTTGGAGGAACTTCTTTTACATGAGACCTTTGCATTACCGATCAACACCTCTTTTCACTTATTGAAGAGATTATTCCTTTTGTTATATATGCCTACTTCTTCTATTAAGTGTTGTCCACTACAAATTAATGCCCCGTCACTTGAAGTTCTTCATATAGCTGATATTTCATTGACTCCTAGAAAATATGACTTCACAAACTTATCCACTCTTGATGAAGCTGCTCTTTGCATTTGCAAGCGTCCGGATTTTAACAATTTGTATACACTCTTGAAAGGACTTTCTAATGTCAAAACATTGGCTCTCGGTTCTAAAACTTTACATGTAAGTTTCATAAATATTTTTCTTTTTTAATTACAAGTTCCATATTTAGTCTCCCATATGCAATTTTATTCTCATTTTATAATTTTGTTATGCAGTTTCTCAGCATGGAGGACAAACTTAACAGCTTGCATCTTCTCACTTTTCACAATTTATTATTTTTAACAGTTGAAATATCTGAGAATTGCAGTTGGAATATGCTCATCAGCTTTCTACAGAATGCTCCAAAACTTAAGGATCTTGCAATTGCGGTTGGAATTCAGTGTGTATGAAGTTTTTTTAACTATATTTGCACAATATATTTTTTTTAAAAGATAAAACACAAGAAGCTGAAAATCTGGCACAAGAAGAGCAAAGACCTAGTAAAAGATACATGGAGTTTGCAAATAAAACCGTTAAACAAATTAATTAATTCAAAACAATTTATATCTGATCTATATTTGTGTAGATTTTCCTAGCAATTTAACCTTCTTTTAAACCATTTTACTTACAATTTTATCTTTATTTTCTTAATAATGTAATTGAAACTATATGCTATATATCAGTTGGAAAATACAAATGTTAATTTTTGGTTTACATGCAGGGAAAATTTGAAATCAATTCCCGAAGAGATGAGGTTGGAAACTCTAGATGGGTGGAGCCATCAGTAACTCCGGCATGTCTTACAACCAGTCTCATTACATTTGAATTTAAAGGAATTCAAAACATTAAAACTGAGTTGGACTTTACGCGATATATT

Protein sequence

>MS.gene09360.t1

MACSDEKHDRLSNLSDDLICHICSFLSTKESYRTCVLSKRWESICTKIPNLHFQLPEISDPVMSKEEIKSLQLASQRRYENIGKLILDSKMGCQPHDVHLWVSKAFVNFALLRRTENIRKLRLDSEKGCQSHDVHMWVSKALDLKVQELDLDLFLHEKVLLPLQLSTCESLVVLKLRGRIQPTLNSSFHVYLPSLKILHLRETVAYSTFDDGKEYDLNNFLSGCPHLEELLLHETFALPINTSFHLLKRLFLLLYMPTSSIKCCPLQINAPSLEVLHIADISLTPRKYDFTNLSTLDEAALCICKRPDFNNLYTLLKGLSNVKTLALGSKTLHFLSMEDKLNSLHLLTFHNLLFLTVEISENCSWNMLISFLQNAPKLKDLAIAVGIQCGKFEINSRRDEVGNSRWVEPSVTPACLTTSLITFEFKGIQNIKTELDFTRYI