AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene07668


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07668.t1 MTR_4g056020 85.876 354 47 1 1 351 1 354 0.0 613
MS.gene07668.t1 MTR_4g056030 81.638 354 62 1 1 351 1 354 0.0 574
MS.gene07668.t1 MTR_4g055990 79.167 384 43 2 1 347 1 384 0.0 572
MS.gene07668.t1 MTR_4g055990 79.167 384 43 2 1 347 1 384 0.0 572
MS.gene07668.t1 MTR_4g056070 76.425 386 51 1 1 346 1 386 0.0 571
MS.gene07668.t1 MTR_4g056040 76.302 384 58 2 1 351 1 384 0.0 562
MS.gene07668.t1 MTR_4g055580 77.238 391 48 4 1 351 92 481 0.0 553
MS.gene07668.t1 MTR_1g038710 72.571 350 90 2 1 344 11 360 1.07e-166 474
MS.gene07668.t1 MTR_1g090883 65.418 347 116 3 2 346 12 356 7.78e-147 420
MS.gene07668.t1 MTR_7g110920 60.630 254 63 2 99 350 1 219 1.56e-89 272
MS.gene07668.t1 MTR_4g093690 58.519 270 103 6 1 266 10 274 7.38e-88 266
MS.gene07668.t1 MTR_1g090900 66.667 177 56 2 1 174 1 177 4.65e-69 216
MS.gene07668.t1 MTR_4g056010 89.899 99 10 0 69 167 2 100 4.59e-57 181
MS.gene07668.t1 MTR_4g056020 81.034 58 8 1 297 351 1 58 4.11e-24 97.4
MS.gene07668.t1 MTR_8g467800 32.055 365 204 13 5 348 16 357 3.47e-22 97.8
MS.gene07668.t1 MTR_4g032730 31.926 379 198 20 9 357 15 363 7.23e-22 97.1
MS.gene07668.t1 MTR_5g080710 35.000 320 176 15 5 317 29 323 2.34e-21 95.5
MS.gene07668.t1 MTR_5g084070 31.667 360 212 15 5 355 9 343 5.15e-21 94.4
MS.gene07668.t1 MTR_1g041245 35.263 190 109 6 9 193 11 191 1.52e-20 92.4
MS.gene07668.t1 MTR_8g014260 29.679 374 207 13 6 348 13 361 1.95e-19 89.7
MS.gene07668.t1 MTR_8g467800 32.673 303 180 10 5 294 16 307 2.46e-19 88.6
MS.gene07668.t1 MTR_8g062270 29.067 375 223 14 9 358 16 372 5.48e-19 88.6
MS.gene07668.t1 MTR_8g468810 30.449 312 170 14 4 290 20 309 1.52e-18 85.9
MS.gene07668.t1 MTR_8g468810 30.449 312 170 14 4 290 20 309 1.57e-18 85.9
MS.gene07668.t1 MTR_8g468810 30.449 312 170 14 4 290 20 309 1.98e-18 85.9
MS.gene07668.t1 MTR_7g007080 28.375 363 175 15 7 354 2 294 2.04e-18 86.3
MS.gene07668.t1 MTR_8g445780 30.508 354 217 10 7 348 11 347 2.21e-18 86.3
MS.gene07668.t1 MTR_8g468810 30.744 309 173 13 4 290 20 309 2.56e-18 85.9
MS.gene07668.t1 MTR_8g468810 30.744 309 173 13 4 290 20 309 4.78e-18 85.5
MS.gene07668.t1 MTR_2g083840 30.383 339 185 15 9 320 21 335 3.91e-17 82.8
MS.gene07668.t1 MTR_8g469020 34.783 207 110 10 9 193 7 210 8.15e-17 82.0
MS.gene07668.t1 MTR_7g115270 35.025 197 108 9 9 193 12 200 1.03e-16 81.3
MS.gene07668.t1 MTR_8g062310 33.014 209 123 9 9 213 25 220 1.15e-16 81.3
MS.gene07668.t1 MTR_8g058970 28.492 358 187 16 4 317 14 346 3.95e-16 80.1
MS.gene07668.t1 MTR_3g107100 31.122 196 118 5 5 193 7 192 5.13e-16 79.3
MS.gene07668.t1 MTR_7g034115 35.500 200 109 7 9 200 11 198 5.68e-16 79.0
MS.gene07668.t1 MTR_1g013560 34.634 205 113 8 5 197 15 210 7.13e-16 78.2
MS.gene07668.t1 MTR_8g468840 28.349 321 192 12 8 305 13 318 1.16e-15 78.6
MS.gene07668.t1 MTR_0492s0020 35.450 189 102 9 9 193 86 258 1.16e-15 78.2
MS.gene07668.t1 MTR_0543s0010 35.450 189 102 9 9 193 86 258 1.40e-15 78.2
MS.gene07668.t1 MTR_1g013560 33.493 209 118 8 1 197 11 210 1.60e-15 78.2
MS.gene07668.t1 MTR_3g108560 29.363 361 169 16 6 354 17 303 1.88e-15 77.4
MS.gene07668.t1 MTR_7g098570 28.090 356 184 13 9 357 20 310 2.28e-15 77.8
MS.gene07668.t1 MTR_8g070950 34.010 197 110 6 6 193 12 197 2.41e-15 77.4
MS.gene07668.t1 MTR_8g085430 32.178 202 106 7 9 193 11 198 2.48e-15 76.6
MS.gene07668.t1 MTR_8g014160 33.333 207 114 6 4 193 36 235 3.52e-15 77.0
MS.gene07668.t1 MTR_1g108820 29.252 294 177 10 9 296 8 276 5.90e-15 75.5
MS.gene07668.t1 MTR_7g032380 32.632 190 114 7 9 193 11 191 7.45e-15 75.5
MS.gene07668.t1 MTR_3g108560 29.775 356 164 16 6 349 17 298 7.64e-15 75.1
MS.gene07668.t1 MTR_7g034110 29.907 214 136 6 9 213 11 219 7.99e-15 75.1
MS.gene07668.t1 MTR_2g007500 31.556 225 117 8 9 216 14 218 8.28e-15 75.1
MS.gene07668.t1 MTR_6g022360 32.323 198 104 7 3 193 37 211 8.29e-15 75.5
MS.gene07668.t1 MTR_1g108820 29.252 294 177 10 9 296 8 276 1.11e-14 75.1
MS.gene07668.t1 MTR_7g098510 33.838 198 110 6 9 198 18 202 1.60e-14 74.7
MS.gene07668.t1 MTR_2g005990 29.493 217 125 7 9 206 6 213 1.62e-14 74.7
MS.gene07668.t1 MTR_8g062080 33.493 209 109 9 1 193 15 209 1.69e-14 74.7
MS.gene07668.t1 MTR_6g045333 34.536 194 109 8 9 193 61 245 2.08e-14 74.7
MS.gene07668.t1 MTR_6g011460 34.184 196 104 11 9 193 46 227 2.82e-14 73.9
MS.gene07668.t1 MTR_7g056447 33.962 212 125 9 1 206 1 203 2.88e-14 72.8
MS.gene07668.t1 MTR_5g045510 31.937 191 113 8 9 193 12 191 3.38e-14 73.6
MS.gene07668.t1 MTR_1g053025 32.039 206 115 9 9 199 2 197 3.40e-14 73.6
MS.gene07668.t1 MTR_5g073420 31.122 196 113 6 9 193 11 195 5.30e-14 73.2
MS.gene07668.t1 MTR_4g050930 29.179 329 207 11 7 322 27 342 6.31e-14 72.8
MS.gene07668.t1 MTR_7g033915 26.801 347 161 14 9 346 11 273 8.73e-14 72.4
MS.gene07668.t1 MTR_4g050930 29.179 329 207 11 7 322 27 342 1.06e-13 72.4
MS.gene07668.t1 MTR_3g048290 28.649 370 227 15 5 349 19 376 1.14e-13 72.4
MS.gene07668.t1 MTR_7g026500 26.543 324 196 13 8 306 13 319 1.46e-13 71.6
MS.gene07668.t1 MTR_7g055943 31.658 199 117 7 3 193 34 221 2.21e-13 71.2
MS.gene07668.t1 MTR_2g007400 33.171 205 112 8 9 195 12 209 2.91e-13 70.9
MS.gene07668.t1 MTR_8g062010 32.673 202 114 7 1 191 1 191 3.09e-13 70.9
MS.gene07668.t1 MTR_4g039440 34.896 192 103 9 9 193 34 210 4.77e-13 70.5
MS.gene07668.t1 MTR_4g050250 33.019 212 109 9 9 193 21 226 5.72e-13 70.1
MS.gene07668.t1 MTR_1g115245 32.143 168 104 3 4 163 21 186 6.41e-13 69.3
MS.gene07668.t1 MTR_7g033990 27.404 208 116 5 9 199 11 200 7.09e-13 69.7
MS.gene07668.t1 MTR_1g085120 32.642 193 111 7 9 193 179 360 8.77e-13 69.7
MS.gene07668.t1 MTR_0009s0080 26.879 346 184 12 11 346 20 306 1.02e-12 69.3
MS.gene07668.t1 MTR_1g085120 32.642 193 111 7 9 193 167 348 1.34e-12 69.3
MS.gene07668.t1 MTR_1g085120 32.642 193 111 7 9 193 92 273 1.37e-12 68.9
MS.gene07668.t1 MTR_5g039950 28.693 352 191 14 9 346 23 328 1.40e-12 68.9
MS.gene07668.t1 MTR_7g060470 31.500 200 106 8 9 193 3 186 1.47e-12 68.6
MS.gene07668.t1 MTR_4g047950 30.978 184 120 5 5 183 9 190 1.73e-12 68.6
MS.gene07668.t1 MTR_3g099900 28.152 341 195 14 6 321 15 330 1.92e-12 68.6
MS.gene07668.t1 MTR_6g022500 31.553 206 122 9 9 206 101 295 2.85e-12 68.2
MS.gene07668.t1 MTR_7g056433 28.125 352 181 14 4 346 7 295 3.16e-12 67.8
MS.gene07668.t1 MTR_3g071850 32.000 200 106 8 9 193 24 208 3.28e-12 68.6
MS.gene07668.t1 MTR_3g107160 25.661 378 198 13 2 363 3 313 3.49e-12 67.4
MS.gene07668.t1 MTR_5g040850 33.816 207 112 8 4 196 2 197 3.93e-12 67.4
MS.gene07668.t1 MTR_3g036250 30.594 219 135 5 6 217 2 210 4.03e-12 67.4
MS.gene07668.t1 MTR_5g061680 34.359 195 106 9 9 193 11 193 4.22e-12 67.0
MS.gene07668.t1 MTR_3g040700 30.890 191 118 5 9 193 43 225 4.22e-12 67.4
MS.gene07668.t1 MTR_3g107120 26.738 374 187 13 1 353 1 308 4.57e-12 67.4
MS.gene07668.t1 MTR_7g033945 34.911 169 92 6 9 165 11 173 4.87e-12 64.3
MS.gene07668.t1 MTR_5g045170 28.972 214 87 7 11 193 16 195 4.95e-12 67.0
MS.gene07668.t1 MTR_7g021630 31.500 200 111 7 6 192 14 200 5.96e-12 66.6
MS.gene07668.t1 MTR_7g021630 31.500 200 111 7 6 192 14 200 5.98e-12 66.6
MS.gene07668.t1 MTR_2g047848 30.952 210 118 9 4 198 2 199 6.44e-12 67.0
MS.gene07668.t1 MTR_3g108150 35.079 191 105 10 8 193 12 188 7.98e-12 66.6
MS.gene07668.t1 MTR_3g114200 32.857 140 85 4 7 140 17 153 1.21e-11 62.8
MS.gene07668.t1 MTR_1g107385 31.884 276 155 12 9 259 32 299 1.38e-11 65.9
MS.gene07668.t1 MTR_5g058100 29.286 280 162 13 1 260 1 264 1.63e-11 65.5
MS.gene07668.t1 MTR_4g080773 29.189 370 217 17 9 346 19 375 1.81e-11 65.9
MS.gene07668.t1 MTR_4g080773 29.189 370 217 17 9 346 19 375 1.91e-11 65.9
MS.gene07668.t1 MTR_2g008320 26.344 372 201 16 9 369 52 361 2.27e-11 65.5
MS.gene07668.t1 MTR_3g463830 34.058 138 86 3 5 139 59 194 2.83e-11 64.7
MS.gene07668.t1 MTR_7g110910 81.579 38 7 0 1 38 158 195 4.06e-11 62.4
MS.gene07668.t1 MTR_1g066830 32.292 192 112 9 9 193 8 188 4.65e-11 63.9
MS.gene07668.t1 MTR_8g017280 33.155 187 109 6 7 185 34 212 4.88e-11 63.5
MS.gene07668.t1 MTR_3g023270 31.720 186 109 7 5 183 8 182 4.94e-11 63.9
MS.gene07668.t1 MTR_1g021825 30.500 200 120 5 4 195 12 200 5.30e-11 63.9
MS.gene07668.t1 MTR_1g011430 30.151 199 124 5 4 197 2 190 5.43e-11 63.9
MS.gene07668.t1 MTR_1g011410 30.348 201 121 5 5 197 311 500 6.00e-11 64.3
MS.gene07668.t1 MTR_1g021825 30.500 200 120 5 4 195 83 271 6.25e-11 63.9
MS.gene07668.t1 MTR_8g062300 29.412 238 135 8 4 216 21 250 6.54e-11 63.9
MS.gene07668.t1 MTR_3g082890 25.753 365 186 17 6 349 14 314 6.72e-11 63.9
MS.gene07668.t1 MTR_1g021820 32.843 204 115 8 4 197 23 214 7.65e-11 63.5
MS.gene07668.t1 MTR_8g017280 33.333 186 108 6 8 185 35 212 8.25e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07668.t1 AT4G14103 30.495 364 208 13 8 344 7 352 1.04e-29 118
MS.gene07668.t1 AT4G14103 30.495 364 208 13 8 344 7 352 1.04e-29 118
MS.gene07668.t1 AT4G14103 29.820 389 223 14 8 364 7 377 1.42e-29 119
MS.gene07668.t1 AT4G00315 31.649 376 203 18 9 357 2 350 1.19e-26 110
MS.gene07668.t1 AT4G14096 29.330 358 213 14 8 344 7 345 1.03e-25 108
MS.gene07668.t1 AT4G14096 29.330 358 213 14 8 344 7 345 1.03e-25 108
MS.gene07668.t1 AT1G55660 29.737 380 213 18 9 361 53 405 3.85e-25 106
MS.gene07668.t1 AT3G59190 28.535 396 224 15 9 362 12 390 6.76e-25 106
MS.gene07668.t1 AT3G59190 28.686 373 212 13 9 344 12 367 1.64e-24 103
MS.gene07668.t1 AT4G10400 30.110 362 198 15 9 355 2 323 2.56e-23 100
MS.gene07668.t1 AT4G10400 30.110 362 198 15 9 355 2 323 2.56e-23 100
MS.gene07668.t1 AT4G10400 30.110 362 198 15 9 355 2 323 2.56e-23 100
MS.gene07668.t1 AT3G03030 28.267 375 216 11 9 345 2 361 2.66e-23 101
MS.gene07668.t1 AT5G41830 27.806 392 221 14 3 352 7 378 6.33e-23 100
MS.gene07668.t1 AT4G22280 32.853 347 206 13 9 346 2 330 7.76e-23 98.2
MS.gene07668.t1 AT1G55660 30.065 306 174 13 9 290 53 342 9.56e-23 98.6
MS.gene07668.t1 AT4G22280 32.853 347 206 13 9 346 2 330 2.48e-22 97.8
MS.gene07668.t1 AT3G50710 29.589 365 225 15 9 364 2 343 3.07e-22 97.8
MS.gene07668.t1 AT4G00320 28.497 386 226 12 3 352 7 378 3.44e-22 98.2
MS.gene07668.t1 AT3G58860 28.729 362 221 12 6 349 4 346 6.44e-22 97.1
MS.gene07668.t1 AT1G51370 36.765 204 107 7 7 205 17 203 1.17e-21 95.1
MS.gene07668.t1 AT1G66310 28.962 366 224 10 4 351 14 361 1.18e-21 96.3
MS.gene07668.t1 AT1G06630 28.726 369 215 12 8 351 20 365 1.92e-21 95.5
MS.gene07668.t1 AT1G06630 28.726 369 215 12 8 351 11 356 2.52e-21 94.7
MS.gene07668.t1 AT1G06630 28.726 369 215 12 8 351 11 356 2.52e-21 94.7
MS.gene07668.t1 AT1G06630 28.726 369 215 12 8 351 11 356 2.52e-21 94.7
MS.gene07668.t1 AT1G06630 28.726 369 215 12 8 351 11 356 2.52e-21 94.7
MS.gene07668.t1 AT3G59230 28.125 384 206 11 9 344 12 373 4.25e-21 95.1
MS.gene07668.t1 AT5G38396 29.610 385 201 16 9 349 2 360 5.20e-21 94.4
MS.gene07668.t1 AT1G51370 36.765 204 107 7 7 205 17 203 5.28e-21 94.0
MS.gene07668.t1 AT1G06630 28.726 369 215 12 8 351 11 356 5.29e-21 94.7
MS.gene07668.t1 AT3G59160 24.824 427 214 14 9 363 13 404 6.65e-21 94.4
MS.gene07668.t1 AT1G51370 36.765 204 107 7 7 205 17 203 7.05e-21 94.0
MS.gene07668.t1 AT3G59240 28.065 367 221 13 9 350 8 356 1.13e-20 93.6
MS.gene07668.t1 AT4G26340 29.462 353 206 16 9 348 2 324 1.21e-20 93.2
MS.gene07668.t1 AT3G59210 28.342 374 216 10 5 345 3 357 1.31e-20 93.6
MS.gene07668.t1 AT3G59210 28.342 374 216 10 5 345 3 357 1.31e-20 93.6
MS.gene07668.t1 AT3G59210 28.342 374 216 10 5 345 3 357 1.31e-20 93.6
MS.gene07668.t1 AT3G59210 28.342 374 216 10 5 345 3 357 1.31e-20 93.6
MS.gene07668.t1 AT3G59210 28.342 374 216 10 5 345 3 357 1.31e-20 93.6
MS.gene07668.t1 AT4G13960 28.533 368 220 12 9 349 2 353 1.78e-20 92.8
MS.gene07668.t1 AT4G13960 28.533 368 220 12 9 349 2 353 1.78e-20 92.8
MS.gene07668.t1 AT3G58960 28.032 371 215 13 9 347 2 352 1.88e-20 92.8
MS.gene07668.t1 AT3G62430 29.504 383 216 16 9 359 2 362 2.12e-20 92.4
MS.gene07668.t1 AT3G58880 28.610 367 215 13 9 346 3 351 4.86e-20 91.7
MS.gene07668.t1 AT1G66300 29.032 372 212 15 4 347 24 371 5.29e-20 91.7
MS.gene07668.t1 AT5G56380 27.704 379 214 12 9 354 2 353 6.05e-20 91.3
MS.gene07668.t1 AT5G56380 27.704 379 214 12 9 354 2 353 6.05e-20 91.3
MS.gene07668.t1 AT1G69630 29.076 368 221 13 2 346 11 361 6.34e-20 91.3
MS.gene07668.t1 AT1G06630 28.571 364 212 12 8 346 11 351 6.52e-20 90.1
MS.gene07668.t1 AT1G06630 28.571 364 212 12 8 346 11 351 6.52e-20 90.1
MS.gene07668.t1 AT1G78760 28.912 377 216 17 7 357 14 364 6.55e-20 91.3
MS.gene07668.t1 AT3G58920 29.134 381 210 15 9 346 2 365 7.41e-20 91.3
MS.gene07668.t1 AT5G41840 27.763 389 220 11 9 350 14 388 8.30e-20 91.3
MS.gene07668.t1 AT3G03040 27.056 377 221 9 9 349 2 360 1.24e-19 90.5
MS.gene07668.t1 AT4G15060 28.075 374 228 15 6 361 23 373 1.53e-19 89.7
MS.gene07668.t1 AT5G53840 29.330 358 207 15 7 346 16 345 1.78e-19 89.7
MS.gene07668.t1 AT2G42720 30.504 377 197 16 9 349 2 349 4.92e-19 88.6
MS.gene07668.t1 AT1G58310 27.461 386 215 15 8 345 7 375 5.23e-19 89.0
MS.gene07668.t1 AT2G26860 29.745 353 211 14 9 347 2 331 5.41e-19 88.2
MS.gene07668.t1 AT2G26860 29.745 353 211 14 9 347 2 331 5.41e-19 88.2
MS.gene07668.t1 AT5G38386 25.424 354 191 10 9 346 2 298 5.97e-19 87.8
MS.gene07668.t1 AT5G38386 25.424 354 191 10 9 346 2 298 5.97e-19 87.8
MS.gene07668.t1 AT5G22670 35.135 222 115 9 8 217 10 214 7.49e-19 88.2
MS.gene07668.t1 AT3G03030 28.528 326 184 10 9 296 2 316 8.06e-19 86.7
MS.gene07668.t1 AT5G56400 29.781 366 211 16 9 359 33 367 1.01e-18 87.8
MS.gene07668.t1 AT5G56440 29.070 344 211 13 9 344 2 320 1.32e-18 87.0
MS.gene07668.t1 AT3G52680 29.752 363 195 14 9 349 21 345 1.42e-18 86.7
MS.gene07668.t1 AT3G62440 29.581 382 202 20 9 346 2 360 1.55e-18 87.0
MS.gene07668.t1 AT3G58900 28.912 377 215 11 9 349 2 361 1.72e-18 87.0
MS.gene07668.t1 AT2G26030 28.000 375 229 16 9 358 4 362 2.75e-18 86.3
MS.gene07668.t1 AT2G26030 28.000 375 229 16 9 358 4 362 2.75e-18 86.3
MS.gene07668.t1 AT5G60610 28.610 367 222 15 9 364 2 339 4.16e-18 85.5
MS.gene07668.t1 AT5G60610 28.610 367 222 15 9 364 2 339 4.16e-18 85.5
MS.gene07668.t1 AT5G38590 28.249 354 221 12 9 357 2 327 5.53e-18 85.1
MS.gene07668.t1 AT3G59200 26.992 389 203 15 8 346 6 363 6.43e-18 84.7
MS.gene07668.t1 AT3G52680 29.834 362 194 14 9 348 21 344 1.12e-17 84.7
MS.gene07668.t1 AT1G16930 28.455 369 204 16 9 346 15 354 1.23e-17 84.3
MS.gene07668.t1 AT1G16930 28.455 369 204 16 9 346 15 354 1.23e-17 84.3
MS.gene07668.t1 AT1G16930 28.455 369 204 16 9 346 15 354 1.23e-17 84.3
MS.gene07668.t1 AT2G26030 28.099 363 220 16 9 346 4 350 1.25e-17 84.3
MS.gene07668.t1 AT5G22700 28.351 388 217 17 9 363 6 365 1.26e-17 84.3
MS.gene07668.t1 AT5G22700 28.351 388 217 17 9 363 6 365 1.26e-17 84.3
MS.gene07668.t1 AT5G22700 28.351 388 217 17 9 363 6 365 1.26e-17 84.3
MS.gene07668.t1 AT5G22700 28.351 388 217 17 9 363 6 365 1.26e-17 84.3
MS.gene07668.t1 AT4G15060 31.301 246 148 8 9 244 172 406 1.47e-17 84.3
MS.gene07668.t1 AT5G22700 28.351 388 217 17 9 363 43 402 1.62e-17 84.3
MS.gene07668.t1 AT4G09920 30.272 294 184 11 9 295 2 281 1.69e-17 82.8
MS.gene07668.t1 AT4G09920 30.272 294 184 11 9 295 2 281 1.69e-17 82.8
MS.gene07668.t1 AT4G13985 28.726 369 224 14 4 347 14 368 2.09e-17 84.0
MS.gene07668.t1 AT5G53635 29.640 361 214 16 11 350 2 343 2.20e-17 83.6
MS.gene07668.t1 AT3G59250 26.989 352 200 12 9 345 7 316 2.55e-17 83.2
MS.gene07668.t1 AT3G59200 26.992 389 203 15 8 346 6 363 2.57e-17 83.6
MS.gene07668.t1 AT4G09920 30.375 293 183 11 9 294 2 280 2.89e-17 81.6
MS.gene07668.t1 AT4G09920 30.375 293 183 11 9 294 2 280 2.89e-17 81.6
MS.gene07668.t1 AT4G09920 30.375 293 183 11 9 294 2 280 2.89e-17 81.6
MS.gene07668.t1 AT1G78750 27.105 380 234 16 2 353 11 375 4.31e-17 82.8
MS.gene07668.t1 AT1G78750 27.105 380 234 16 2 353 11 375 4.31e-17 82.8
MS.gene07668.t1 AT5G62970 30.159 378 193 20 9 344 2 350 5.06e-17 82.4
MS.gene07668.t1 AT1G66290 29.491 373 203 17 4 346 24 366 6.59e-17 82.4
MS.gene07668.t1 AT5G44490 27.346 373 221 13 4 347 12 363 9.75e-17 81.6
MS.gene07668.t1 AT5G44490 27.346 373 221 13 4 347 12 363 1.24e-16 81.6
MS.gene07668.t1 AT4G26350 27.348 362 212 12 9 348 2 334 2.04e-16 80.5
MS.gene07668.t1 AT5G15620 29.330 358 215 13 9 346 2 341 3.82e-16 79.7
MS.gene07668.t1 AT4G00160 29.412 374 201 16 9 358 16 350 6.56e-16 79.3
MS.gene07668.t1 AT5G38590 31.250 240 153 7 9 245 2 232 7.75e-16 77.4
MS.gene07668.t1 AT5G25850 35.079 191 102 8 9 193 20 194 1.02e-15 79.0
MS.gene07668.t1 AT3G44060 29.859 355 213 18 14 350 4 340 1.08e-15 78.6
MS.gene07668.t1 AT2G29930 27.926 376 201 17 8 349 11 350 1.97e-15 77.8
MS.gene07668.t1 AT2G29930 27.926 376 201 17 8 349 11 350 1.97e-15 77.8
MS.gene07668.t1 AT3G58900 31.599 269 156 8 9 262 2 257 2.68e-15 76.3
MS.gene07668.t1 AT3G58900 31.599 269 156 8 9 262 2 257 3.49e-15 76.3
MS.gene07668.t1 AT3G58900 31.599 269 156 8 9 262 2 257 3.49e-15 76.3
MS.gene07668.t1 AT5G38392 34.135 208 111 7 9 199 2 200 3.58e-15 74.3
MS.gene07668.t1 AT2G42730 28.022 364 216 15 9 344 5 350 4.45e-15 76.6
MS.gene07668.t1 AT5G56690 29.248 359 210 15 11 351 4 336 4.53e-15 76.6
MS.gene07668.t1 AT5G38570 27.874 348 183 14 9 349 2 288 6.26e-15 75.9
MS.gene07668.t1 AT5G22700 28.191 376 192 16 9 363 43 361 7.75e-15 75.9
MS.gene07668.t1 AT5G44950 26.975 367 218 16 8 346 3 347 7.81e-15 75.9
MS.gene07668.t1 AT5G18780 26.829 369 209 16 9 347 11 348 1.19e-14 75.1
MS.gene07668.t1 AT5G18780 26.829 369 209 16 9 347 11 348 1.19e-14 75.1
MS.gene07668.t1 AT3G58980 27.838 370 216 15 9 346 2 352 1.22e-14 75.9
MS.gene07668.t1 AT5G18780 26.829 369 209 16 8 346 10 347 1.23e-14 75.5
MS.gene07668.t1 AT5G18780 26.829 369 209 16 8 346 10 347 1.23e-14 75.5
MS.gene07668.t1 AT5G56370 29.444 360 194 18 9 350 2 319 1.34e-14 74.3
MS.gene07668.t1 AT3G59000 25.333 375 226 10 9 346 2 359 1.42e-14 75.5
MS.gene07668.t1 AT5G38390 26.273 373 217 14 9 349 2 348 1.73e-14 75.1
MS.gene07668.t1 AT3G58930 26.053 380 226 11 9 346 2 368 2.39e-14 74.7
MS.gene07668.t1 AT3G58930 26.053 380 226 11 9 346 2 368 2.39e-14 74.7
MS.gene07668.t1 AT3G58930 26.053 380 226 11 9 346 2 368 2.39e-14 74.7
MS.gene07668.t1 AT5G56370 29.288 379 215 18 9 370 2 344 4.03e-14 73.6
MS.gene07668.t1 AT5G56370 29.288 379 215 18 9 370 2 344 4.03e-14 73.6
MS.gene07668.t1 AT1G52650 26.133 375 221 14 9 349 2 354 4.46e-14 73.6
MS.gene07668.t1 AT5G56420 28.367 349 215 13 8 346 5 328 6.04e-14 73.2
MS.gene07668.t1 AT5G56420 28.367 349 215 13 8 346 5 328 6.04e-14 73.2
MS.gene07668.t1 AT5G56420 28.367 349 215 13 8 346 5 328 6.04e-14 73.2
MS.gene07668.t1 AT3G59150 29.155 343 193 16 9 320 13 336 6.33e-14 73.2
MS.gene07668.t1 AT3G42770 30.492 305 171 12 14 294 4 291 8.90e-14 72.8
MS.gene07668.t1 AT1G13780 26.166 386 232 17 9 360 10 376 9.96e-14 72.8
MS.gene07668.t1 AT1G66320 25.341 367 231 15 4 346 24 371 1.52e-13 72.0
MS.gene07668.t1 AT3G60040 26.685 371 229 11 9 351 13 368 2.42e-13 71.6
MS.gene07668.t1 AT5G25860 26.260 377 234 15 9 355 12 374 2.67e-13 71.2
MS.gene07668.t1 AT3G59180 27.607 326 188 14 69 364 41 348 2.92e-13 71.2
MS.gene07668.t1 AT2G04230 27.671 365 211 13 8 349 12 346 3.06e-13 71.2
MS.gene07668.t1 AT3G60040 26.685 371 229 11 9 351 230 585 3.21e-13 71.6
MS.gene07668.t1 AT3G56780 31.122 196 115 7 11 200 9 190 3.29e-13 70.9
MS.gene07668.t1 AT3G60040 26.685 371 229 11 9 351 232 587 3.37e-13 71.2
MS.gene07668.t1 AT5G27750 25.323 387 215 16 9 347 5 365 3.53e-13 70.5
MS.gene07668.t1 AT5G27750 25.389 386 214 16 9 346 5 364 3.54e-13 70.9
MS.gene07668.t1 AT3G49030 27.838 370 216 13 7 358 19 355 3.72e-13 70.9
MS.gene07668.t1 AT5G35995 26.133 375 211 15 8 349 4 345 4.27e-13 70.9
MS.gene07668.t1 AT5G35995 26.133 375 211 15 8 349 4 345 4.27e-13 70.9
MS.gene07668.t1 AT5G53640 30.000 190 117 6 7 193 20 196 4.56e-13 68.6
MS.gene07668.t1 AT3G60040 26.685 371 229 11 9 351 233 588 4.89e-13 70.9
MS.gene07668.t1 AT3G60040 26.685 371 229 11 9 351 232 587 4.98e-13 70.9
MS.gene07668.t1 AT3G56780 31.122 196 115 7 11 200 9 190 5.41e-13 70.5
MS.gene07668.t1 AT3G56780 31.122 196 115 7 11 200 9 190 6.51e-13 70.1
MS.gene07668.t1 AT1G32375 27.671 365 217 16 9 355 2 337 6.97e-13 70.1
MS.gene07668.t1 AT1G32375 27.671 365 217 16 9 355 2 337 6.97e-13 70.1
MS.gene07668.t1 AT2G29910 27.874 348 199 14 8 321 28 357 1.23e-12 68.9
MS.gene07668.t1 AT2G29910 27.874 348 199 14 8 321 4 333 1.28e-12 68.6
MS.gene07668.t1 AT2G29910 27.874 348 199 14 8 321 4 333 1.28e-12 68.6
MS.gene07668.t1 AT2G29910 27.874 348 199 14 8 321 4 333 1.28e-12 68.6
MS.gene07668.t1 AT2G29910 27.874 348 199 14 8 321 4 333 1.28e-12 68.6
MS.gene07668.t1 AT5G22730 29.064 203 129 6 8 205 27 219 2.19e-12 68.2
MS.gene07668.t1 AT3G59000 34.211 152 88 5 9 149 2 152 2.68e-12 67.8
MS.gene07668.t1 AT5G22730 26.027 365 230 13 8 347 27 376 2.76e-12 68.2
MS.gene07668.t1 AT5G22730 26.027 365 230 13 8 347 27 376 2.76e-12 68.2
MS.gene07668.t1 AT3G26922 30.556 252 140 11 8 244 13 244 4.27e-12 66.6
MS.gene07668.t1 AT3G26922 30.556 252 140 11 8 244 13 244 4.27e-12 66.6
MS.gene07668.t1 AT5G22720 30.986 213 121 8 4 205 18 215 5.16e-12 67.4
MS.gene07668.t1 AT5G22610 33.166 199 115 9 8 197 17 206 5.40e-12 67.4
MS.gene07668.t1 AT3G58940 25.419 358 225 10 9 346 2 337 6.00e-12 67.4
MS.gene07668.t1 AT3G58940 25.419 358 225 10 9 346 2 337 6.00e-12 67.4
MS.gene07668.t1 AT5G22610 33.166 199 115 9 8 197 17 206 6.63e-12 67.0
MS.gene07668.t1 AT5G56820 26.776 366 205 16 9 355 15 336 7.12e-12 67.0
MS.gene07668.t1 AT5G41630 26.500 400 226 16 9 361 12 390 9.10e-12 66.6
MS.gene07668.t1 AT2G29910 31.414 191 117 6 8 195 4 183 1.06e-11 65.9
MS.gene07668.t1 AT2G29910 31.414 191 117 6 8 195 4 183 1.06e-11 65.9
MS.gene07668.t1 AT3G54160 27.019 322 200 12 50 355 37 339 4.08e-11 64.7
MS.gene07668.t1 AT3G14710 28.415 366 214 13 3 351 20 354 6.93e-11 63.9

Find 62 sgRNAs with CRISPR-Local

Find 115 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTACAAATTTGATTTCTT+TGG 0.200851 4.1:-42477339 None:intergenic
TCTATCCGGTTGTCCACTTC+TGG 0.259907 4.1:+42477697 MS.gene07668:CDS
ACATGTTCTATAACACTCTT+TGG 0.268393 4.1:-42477231 None:intergenic
GCCCCGTCACTTGAAGTTCT+TGG 0.285827 4.1:+42477845 MS.gene07668:CDS
TATAACACTCTTTGGTTGAT+AGG 0.294346 4.1:-42477223 None:intergenic
ATTGTAAGATCCTTAAGTTT+TGG 0.322001 4.1:-42478257 None:intergenic
TAATTCAATTGAAGATCATA+TGG 0.373911 4.1:+42479165 MS.gene07668:CDS
ACTTGTGGTCTTAAAATTGC+GGG 0.382147 4.1:+42477547 MS.gene07668:CDS
CAAGGTCCAGGAACTTGACT+TGG 0.406084 4.1:+42477469 MS.gene07668:CDS
ACTTTCTAATGTCAAATCAT+TGG 0.410912 4.1:+42477991 MS.gene07668:CDS
AAAGTGAAGGTTGGGAATCT+TGG 0.417455 4.1:-42477285 None:intergenic
AAAAGCAGCTCGATCAAGAT+TGG 0.422509 4.1:-42477918 None:intergenic
ACAGAATGCTCCAAAACTTA+AGG 0.424972 4.1:+42478247 MS.gene07668:CDS
GGTAATTGAAAGTGAAGGTT+GGG 0.443422 4.1:-42477293 None:intergenic
TTGATTTCTTTGGAAATCAC+AGG 0.444868 4.1:-42477329 None:intergenic
ACAAACCCAAGTCAAGTTCC+TGG 0.450933 4.1:-42477475 None:intergenic
AATGTCAAATCATTGGCTCT+TGG 0.453987 4.1:+42477998 MS.gene07668:CDS
GTGACTCACACGTGGAAAGC+TGG 0.463853 4.1:-42477526 None:intergenic
CTAAGGCTTGATAGTGAGAA+AGG 0.463856 4.1:+42477398 MS.gene07668:CDS
TTCCTCCAGAAGTGGACAAC+CGG 0.464046 4.1:-42477702 None:intergenic
AAGTAGGCATAGATAAAGAA+AGG 0.492625 4.1:-42477790 None:intergenic
TACCAAGAACTTCAAGTGAC+GGG 0.495644 4.1:-42477847 None:intergenic
GGCATTAGATCTCAAGGTCC+AGG 0.496808 4.1:+42477457 MS.gene07668:CDS
GTATTCAAACTGTTAAAATC+CGG 0.512476 4.1:-42477956 None:intergenic
CACTTGTGGTCTTAAAATTG+CGG 0.513373 4.1:+42477546 MS.gene07668:CDS
TGTACACATGTGGGTTTCAA+AGG 0.528762 4.1:+42477436 MS.gene07668:CDS
CCGAAAATATAAGAAAACTA+AGG 0.538047 4.1:+42477381 MS.gene07668:CDS
TTCAAAGGCATTAGATCTCA+AGG 0.542872 4.1:+42477451 MS.gene07668:CDS
AAGGTCCAGGAACTTGACTT+GGG 0.547066 4.1:+42477470 MS.gene07668:CDS
TGGTAATTGAAAGTGAAGGT+TGG 0.551378 4.1:-42477294 None:intergenic
TGTTATGCAGTTTCTCAGCA+TGG 0.553413 4.1:+42478121 MS.gene07668:intron
AAGTGAAAAGAGATATTGAT+GGG 0.554986 4.1:-42477752 None:intergenic
AGATCATATGGATGCCTTCG+AGG 0.557833 4.1:+42479177 MS.gene07668:CDS
ATCCGGTTGTCCACTTCTGG+AGG 0.562183 4.1:+42477700 MS.gene07668:CDS
TTCCACGTGTGAGTCACTTG+TGG 0.563660 4.1:+42477532 MS.gene07668:CDS
TAAGTGAAAAGAGATATTGA+TGG 0.564188 4.1:-42477753 None:intergenic
CAACACTTAATAATAGAAGT+AGG 0.565481 4.1:-42477806 None:intergenic
GACGGGGCATTAATTTGTAG+TGG 0.566180 4.1:-42477830 None:intergenic
TAGAATACCTCACAGTTTCA+CGG 0.569419 4.1:-42477637 None:intergenic
GCAGATCGACTCCCATCTTG+TGG 0.572297 4.1:-42477261 None:intergenic
AAATATCTGAGAATTGCAGT+TGG 0.586019 4.1:+42478204 MS.gene07668:CDS
AGTTTGAATACACTCAAGAA+AGG 0.586244 4.1:+42477968 MS.gene07668:CDS
TGAAAAGAAGAATTGAGTGT+TGG 0.588267 4.1:-42477581 None:intergenic
ACTTAAGGATCTTACAATTG+CGG 0.591456 4.1:+42478262 MS.gene07668:CDS
TCACACGTGGAAAGCTGGAG+CGG 0.598731 4.1:-42477521 None:intergenic
ATACCAAGAACTTCAAGTGA+CGG 0.613196 4.1:-42477848 None:intergenic
TGATTTCTTTGGAAATCACA+GGG 0.615722 4.1:-42477328 None:intergenic
CTAGATTAAAAGTGTAAGAG+CGG 0.616395 4.1:-42479212 None:intergenic
AGAAGAAGTTCCTCCAGAAG+TGG 0.624259 4.1:-42477710 None:intergenic
GACCACAAGTGACTCACACG+TGG 0.646828 4.1:-42477534 None:intergenic
GCCACATGATGTACACATGT+GGG 0.650684 4.1:+42477427 MS.gene07668:CDS
ACATGTGTACATCATGTGGC+TGG 0.656362 4.1:-42477424 None:intergenic
AGATGAAGAATCTTTAGTGA+CGG 0.657169 4.1:-42477614 None:intergenic
AGGTATTCTATGTTTGATGA+CGG 0.657979 4.1:+42477650 MS.gene07668:CDS
CTTGTGGTCTTAAAATTGCG+GGG 0.666096 4.1:+42477548 MS.gene07668:CDS
ACCCACATGTGTACATCATG+TGG 0.672342 4.1:-42477428 None:intergenic
TTCATCTCCGTGAAACTGTG+AGG 0.673351 4.1:+42477630 MS.gene07668:CDS
GGTCTTGATTGAATCCTCGA+AGG 0.677387 4.1:-42479191 None:intergenic
AGCCACATGATGTACACATG+TGG 0.685172 4.1:+42477426 MS.gene07668:CDS
ACCAAGAACTTCAAGTGACG+GGG 0.688115 4.1:-42477846 None:intergenic
TCTCTGGTAATTGAAAGTGA+AGG 0.696256 4.1:-42477298 None:intergenic
TATGCAGTTTCTCAGCATGG+AGG 0.703511 4.1:+42478124 MS.gene07668:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAGTTAAAAAATTTAAG+AGG - chr4.1:42479069-42479088 None:intergenic 10.0%
!!! AAAATTCTAATGATAATTTT+TGG + chr4.1:42478568-42478587 MS.gene07668:intron 10.0%
!!! TATCTTTTAAAAAAATATTG+TGG - chr4.1:42478317-42478336 None:intergenic 10.0%
!!! TCACAATTTATTATTTTTAT+CGG + chr4.1:42478178-42478197 MS.gene07668:CDS 10.0%
!!! TGAATAAATAATTTGTTTAT+TGG - chr4.1:42478415-42478434 None:intergenic 10.0%
!! ACTATATGTTATATATCATT+TGG + chr4.1:42478545-42478564 MS.gene07668:intron 15.0%
!! ATATTATACTATTACATTCA+TGG + chr4.1:42479002-42479021 MS.gene07668:intron 15.0%
!!! AATTAATCAATATTTGTTAC+AGG + chr4.1:42479138-42479157 MS.gene07668:intron 15.0%
!!! ATTTACAAATTTGATTTCTT+TGG - chr4.1:42477342-42477361 None:intergenic 15.0%
!! AATATAATATGCTCAAAATC+TGG + chr4.1:42478338-42478357 MS.gene07668:intron 20.0%
!! AATATAGTTCAGATATAGAT+TGG - chr4.1:42478440-42478459 None:intergenic 20.0%
!! CTCATTACATTTGAATTTAT+TGG + chr4.1:42478692-42478711 MS.gene07668:intron 20.0%
!! TAATTCAATTGAAGATCATA+TGG + chr4.1:42479165-42479184 MS.gene07668:CDS 20.0%
!!! CCTTAGTTTTCTTATATTTT+CGG - chr4.1:42477384-42477403 None:intergenic 20.0%
!!! TTTGTAAACTCATATTTTCT+AGG - chr4.1:42477893-42477912 None:intergenic 20.0%
! AAATTCAAATGTAATGAGAC+TGG - chr4.1:42478690-42478709 None:intergenic 25.0%
! AAGTGAAAAGAGATATTGAT+GGG - chr4.1:42477755-42477774 None:intergenic 25.0%
! AATGAGAATAGAATTGCATA+TGG - chr4.1:42478093-42478112 None:intergenic 25.0%
! ACTTTCTAATGTCAAATCAT+TGG + chr4.1:42477991-42478010 MS.gene07668:CDS 25.0%
! CAACACTTAATAATAGAAGT+AGG - chr4.1:42477809-42477828 None:intergenic 25.0%
! CCGAAAATATAAGAAAACTA+AGG + chr4.1:42477381-42477400 MS.gene07668:CDS 25.0%
! GTATTCAAACTGTTAAAATC+CGG - chr4.1:42477959-42477978 None:intergenic 25.0%
! TAAGTGAAAAGAGATATTGA+TGG - chr4.1:42477756-42477775 None:intergenic 25.0%
! TCAAAACATAAAAACTGAGT+TGG + chr4.1:42478718-42478737 MS.gene07668:intron 25.0%
!! AATATCTAGAACAATAAGAG+AGG - chr4.1:42478943-42478962 None:intergenic 25.0%
!! ACTCTTCTTTTCTTTAAACT+GGG - chr4.1:42478803-42478822 None:intergenic 25.0%
!! ATTGTAAGATCCTTAAGTTT+TGG - chr4.1:42478260-42478279 None:intergenic 25.0%
!! GATCTCAATAATTTTCTATC+CGG + chr4.1:42477683-42477702 MS.gene07668:CDS 25.0%
!! TACTCTTCTTTTCTTTAAAC+TGG - chr4.1:42478804-42478823 None:intergenic 25.0%
AAATATCTGAGAATTGCAGT+TGG + chr4.1:42478204-42478223 MS.gene07668:CDS 30.0%
AAGTAGGCATAGATAAAGAA+AGG - chr4.1:42477793-42477812 None:intergenic 30.0%
ACATGTTCTATAACACTCTT+TGG - chr4.1:42477234-42477253 None:intergenic 30.0%
ACTTAAGGATCTTACAATTG+CGG + chr4.1:42478262-42478281 MS.gene07668:CDS 30.0%
AGATGAAGAATCTTTAGTGA+CGG - chr4.1:42477617-42477636 None:intergenic 30.0%
AGGTATTCTATGTTTGATGA+CGG + chr4.1:42477650-42477669 MS.gene07668:CDS 30.0%
AGTTTGAATACACTCAAGAA+AGG + chr4.1:42477968-42477987 MS.gene07668:CDS 30.0%
TATAACACTCTTTGGTTGAT+AGG - chr4.1:42477226-42477245 None:intergenic 30.0%
TGAAAAGAAGAATTGAGTGT+TGG - chr4.1:42477584-42477603 None:intergenic 30.0%
! ATGTGTTTTATCCACAAGAT+GGG + chr4.1:42477250-42477269 MS.gene07668:CDS 30.0%
! CTAGATTAAAAGTGTAAGAG+CGG - chr4.1:42479215-42479234 None:intergenic 30.0%
! TGATTTCTTTGGAAATCACA+GGG - chr4.1:42477331-42477350 None:intergenic 30.0%
! TTGATTTCTTTGGAAATCAC+AGG - chr4.1:42477332-42477351 None:intergenic 30.0%
!!! TTTTTTCATTTGTGAGCATC+CGG + chr4.1:42477937-42477956 MS.gene07668:CDS 30.0%
AATCAATTCCCGAAGAAAAG+AGG + chr4.1:42478613-42478632 MS.gene07668:intron 35.0%
ACAGAATGCTCCAAAACTTA+AGG + chr4.1:42478247-42478266 MS.gene07668:CDS 35.0%
AGCTCGAAAGAAGGTTAAAT+TGG - chr4.1:42478479-42478498 None:intergenic 35.0%
AGTAGAAAAAAGCTTACGCA+AGG + chr4.1:42478820-42478839 MS.gene07668:intron 35.0%
ATACCAAGAACTTCAAGTGA+CGG - chr4.1:42477851-42477870 None:intergenic 35.0%
CAAGAGATACAAAGTTGTGT+TGG - chr4.1:42478977-42478996 None:intergenic 35.0%
CGAAAGAAGGTTAAATTGGT+AGG - chr4.1:42478475-42478494 None:intergenic 35.0%
GAGTAAAAAAGCTCGAAAGA+AGG - chr4.1:42478488-42478507 None:intergenic 35.0%
GGTAATTGAAAGTGAAGGTT+GGG - chr4.1:42477296-42477315 None:intergenic 35.0%
GTAGAAAAAAGCTTACGCAA+GGG + chr4.1:42478821-42478840 MS.gene07668:intron 35.0%
TAGAAAAAAGCTTACGCAAG+GGG + chr4.1:42478822-42478841 MS.gene07668:intron 35.0%
TAGAATACCTCACAGTTTCA+CGG - chr4.1:42477640-42477659 None:intergenic 35.0%
TCACTCAAGTAAGTTAGAGA+TGG + chr4.1:42478763-42478782 MS.gene07668:intron 35.0%
TCTCTGGTAATTGAAAGTGA+AGG - chr4.1:42477301-42477320 None:intergenic 35.0%
TGCATATGGCTGACTAAATA+TGG - chr4.1:42478079-42478098 None:intergenic 35.0%
TGGTAATTGAAAGTGAAGGT+TGG - chr4.1:42477297-42477316 None:intergenic 35.0%
! ACTTGTGGTCTTAAAATTGC+GGG + chr4.1:42477547-42477566 MS.gene07668:CDS 35.0%
! AGACTGGTTGTAAGACATAT+CGG - chr4.1:42478674-42478693 None:intergenic 35.0%
! AGTTTCCAACCTCTTTTCTT+CGG - chr4.1:42478625-42478644 None:intergenic 35.0%
! CACTTGTGGTCTTAAAATTG+CGG + chr4.1:42477546-42477565 MS.gene07668:CDS 35.0%
! CATGTGTTTTATCCACAAGA+TGG + chr4.1:42477249-42477268 MS.gene07668:CDS 35.0%
!! AATGTCAAATCATTGGCTCT+TGG + chr4.1:42477998-42478017 MS.gene07668:CDS 35.0%
!! TTATATTTTCGGTGCGTCTT+AGG - chr4.1:42477373-42477392 None:intergenic 35.0%
!! TTCAAAGGCATTAGATCTCA+AGG + chr4.1:42477451-42477470 MS.gene07668:CDS 35.0%
!!! GCGGCAATAAGATTTTTTCA+TGG - chr4.1:42477505-42477524 None:intergenic 35.0%
AAAAGCAGCTCGATCAAGAT+TGG - chr4.1:42477921-42477940 None:intergenic 40.0%
AAAGTGAAGGTTGGGAATCT+TGG - chr4.1:42477288-42477307 None:intergenic 40.0%
AATTCCCGAAGAAAAGAGGT+TGG + chr4.1:42478617-42478636 MS.gene07668:intron 40.0%
ACGTCATACCCATACTAGTA+CGG - chr4.1:42478861-42478880 None:intergenic 40.0%
AGAAATCCTCCGTACTAGTA+TGG + chr4.1:42478849-42478868 MS.gene07668:intron 40.0%
ATCACAGGGTCAAAAATCTC+TGG - chr4.1:42477317-42477336 None:intergenic 40.0%
GAAATCCTCCGTACTAGTAT+GGG + chr4.1:42478850-42478869 MS.gene07668:intron 40.0%
GAGATACAAAGTTGTGTTGG+TGG - chr4.1:42478974-42478993 None:intergenic 40.0%
TACCAAGAACTTCAAGTGAC+GGG - chr4.1:42477850-42477869 None:intergenic 40.0%
TGTACACATGTGGGTTTCAA+AGG + chr4.1:42477436-42477455 MS.gene07668:CDS 40.0%
TGTTATGCAGTTTCTCAGCA+TGG + chr4.1:42478121-42478140 MS.gene07668:intron 40.0%
! CTTGTGGTCTTAAAATTGCG+GGG + chr4.1:42477548-42477567 MS.gene07668:CDS 40.0%
! GTTTCCAACCTCTTTTCTTC+GGG - chr4.1:42478624-42478643 None:intergenic 40.0%
!! CTAAGGCTTGATAGTGAGAA+AGG + chr4.1:42477398-42477417 MS.gene07668:CDS 40.0%
!! GATGGGTTTTCGAAAAGTCT+CGG - chr4.1:42477738-42477757 None:intergenic 40.0%
!! TACAAAGTTGTGTTGGTGGT+CGG - chr4.1:42478970-42478989 None:intergenic 40.0%
AAGAGGTTGGAAACTCGAGT+TGG + chr4.1:42478630-42478649 MS.gene07668:intron 45.0%
AAGGTCCAGGAACTTGACTT+GGG + chr4.1:42477470-42477489 MS.gene07668:CDS 45.0%
ACAAACCCAAGTCAAGTTCC+TGG - chr4.1:42477478-42477497 None:intergenic 45.0%
ACATGTGTACATCATGTGGC+TGG - chr4.1:42477427-42477446 None:intergenic 45.0%
ACCAAGAACTTCAAGTGACG+GGG - chr4.1:42477849-42477868 None:intergenic 45.0%
ACCCACATGTGTACATCATG+TGG - chr4.1:42477431-42477450 None:intergenic 45.0%
AGAAGAAGTTCCTCCAGAAG+TGG - chr4.1:42477713-42477732 None:intergenic 45.0%
AGACATATCGGAGTTACCGA+CGG - chr4.1:42478662-42478681 None:intergenic 45.0%
AGAGGTTGGAAACTCGAGTT+GGG + chr4.1:42478631-42478650 MS.gene07668:intron 45.0%
AGATCATATGGATGCCTTCG+AGG + chr4.1:42479177-42479196 MS.gene07668:CDS 45.0%
AGCCACATGATGTACACATG+TGG + chr4.1:42477426-42477445 MS.gene07668:CDS 45.0%
GCCACATGATGTACACATGT+GGG + chr4.1:42477427-42477446 MS.gene07668:CDS 45.0%
GGTCTTGATTGAATCCTCGA+AGG - chr4.1:42479194-42479213 None:intergenic 45.0%
TATGCAGTTTCTCAGCATGG+AGG + chr4.1:42478124-42478143 MS.gene07668:intron 45.0%
TCATACCCATACTAGTACGG+AGG - chr4.1:42478858-42478877 None:intergenic 45.0%
TTCATCTCCGTGAAACTGTG+AGG + chr4.1:42477630-42477649 MS.gene07668:CDS 45.0%
!! GACGGGGCATTAATTTGTAG+TGG - chr4.1:42477833-42477852 None:intergenic 45.0%
!!! ACTTTTTTAATTTTTTTTAT+CGG + chr4.1:42479082-42479101 MS.gene07668:intron 5.0%
CAAGGTCCAGGAACTTGACT+TGG + chr4.1:42477469-42477488 MS.gene07668:CDS 50.0%
GGCATTAGATCTCAAGGTCC+AGG + chr4.1:42477457-42477476 MS.gene07668:CDS 50.0%
TCTATCCGGTTGTCCACTTC+TGG + chr4.1:42477697-42477716 MS.gene07668:CDS 50.0%
TTCCACGTGTGAGTCACTTG+TGG + chr4.1:42477532-42477551 MS.gene07668:CDS 50.0%
TTCCTCCAGAAGTGGACAAC+CGG - chr4.1:42477705-42477724 None:intergenic 50.0%
ATCCGGTTGTCCACTTCTGG+AGG + chr4.1:42477700-42477719 MS.gene07668:CDS 55.0%
GACCACAAGTGACTCACACG+TGG - chr4.1:42477537-42477556 None:intergenic 55.0%
GCCCCGTCACTTGAAGTTCT+TGG + chr4.1:42477845-42477864 MS.gene07668:CDS 55.0%
GTGACTCACACGTGGAAAGC+TGG - chr4.1:42477529-42477548 None:intergenic 55.0%
TCACACGTGGAAAGCTGGAG+CGG - chr4.1:42477524-42477543 None:intergenic 55.0%
! GCAGATCGACTCCCATCTTG+TGG - chr4.1:42477264-42477283 None:intergenic 55.0%
!! GGTTGGAAACTCGAGTTGGG+CGG + chr4.1:42478634-42478653 MS.gene07668:intron 55.0%
!! CTCGAGTTGGGCGGAGCCGT+CGG + chr4.1:42478643-42478662 MS.gene07668:intron 70.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 42477149 42479234 42477149 ID=MS.gene07668
chr4.1 mRNA 42477149 42479234 42477149 ID=MS.gene07668.t1;Parent=MS.gene07668
chr4.1 exon 42477149 42478036 42477149 ID=MS.gene07668.t1.exon1;Parent=MS.gene07668.t1
chr4.1 CDS 42477149 42478036 42477149 ID=cds.MS.gene07668.t1;Parent=MS.gene07668.t1
chr4.1 exon 42478131 42478283 42478131 ID=MS.gene07668.t1.exon2;Parent=MS.gene07668.t1
chr4.1 CDS 42478131 42478283 42478131 ID=cds.MS.gene07668.t1;Parent=MS.gene07668.t1
chr4.1 exon 42479160 42479234 42479160 ID=MS.gene07668.t1.exon3;Parent=MS.gene07668.t1
chr4.1 CDS 42479160 42479234 42479160 ID=cds.MS.gene07668.t1;Parent=MS.gene07668.t1
Gene Sequence

>MS.gene07668

ATGGCGTGCTCTGATGAAGAACATGATCGATTAAGCAATCTCTCAGACGATTTGATTTGTCATATTTTGTCTTTCCTATCAACCAAAGAGTGTTATAGAACATGTGTTTTATCCACAAGATGGGAGTCGATCTGCACCAAGATTCCCAACCTTCACTTTCAATTACCAGAGATTTTTGACCCTGTGATTTCCAAAGAAATCAAATTTGTAAATGTTGCTCTCCTAAGACGCACCGAAAATATAAGAAAACTAAGGCTTGATAGTGAGAAAGGCTGCCAGCCACATGATGTACACATGTGGGTTTCAAAGGCATTAGATCTCAAGGTCCAGGAACTTGACTTGGGTTTGTTTCTCCATGAAAAAATCTTATTGCCGCTCCAGCTTTCCACGTGTGAGTCACTTGTGGTCTTAAAATTGCGGGGCAAAATTCAACCAACACTCAATTCTTCTTTTCATGTATATTTACCGTCACTAAAGATTCTTCATCTCCGTGAAACTGTGAGGTATTCTATGTTTGATGACGGTAAAGAGTATGATCTCAATAATTTTCTATCCGGTTGTCCACTTCTGGAGGAACTTCTTCTAACCGAGACTTTTCGAAAACCCATCAATATCTCTTTTCACTTACTGAAGAGATTATACCTTTCTTTATCTATGCCTACTTCTATTATTAAGTGTTGTCCACTACAAATTAATGCCCCGTCACTTGAAGTTCTTGGTATTTATGATTTTTCATTGACTCCTAGAAAATATGAGTTTACAAACTTGTCCAATCTTGATCGAGCTGCTTTTTTCATTTGTGAGCATCCGGATTTTAACAGTTTGAATACACTCAAGAAAGGACTTTCTAATGTCAAATCATTGGCTCTTGGTTCTAAAACTTTTCATGTAAGCTTCATAAATATTTTTCTTTTTTCATTACAAGTTCCATATTTAGTCAGCCATATGCAATTCTATTCTCATTTATAATTTTGTTATGCAGTTTCTCAGCATGGAGGACAAACTTGACAACTTGCATCTTCTCACTTTTCACAATTTATTATTTTTATCGGTTGAAATATCTGAGAATTGCAGTTGGAATATGCTCATCAGCTTTCTACAGAATGCTCCAAAACTTAAGGATCTTACAATTGCGGTGTGTATGATGTTTTTTTTAACTATATTTCCACAATATTTTTTTAAAAGATAAAATATAATATGCTCAAAATCTGGCACAAAAAGAGCAGAGACTTAGTAAAAGATACACAGAGTTTGCAAATAAAACCAATAAACAAATTATTTATTCAAACCAATCTATATCTGAACTATATTTGTGTAGATTTTCCTACCAATTTAACCTTCTTTCGAGCTTTTTTACTCACAATTTTATCTTTATTTACTTAATAATATAATTGAAACTATATGTTATATATCATTTGGAAAATTCTAATGATAATTTTTGGTTTACATGCAGAGAAAAATCGAAATCAATTCCCGAAGAAAAGAGGTTGGAAACTCGAGTTGGGCGGAGCCGTCGGTAACTCCGATATGTCTTACAACCAGTCTCATTACATTTGAATTTATTGGAATTCAAAACATAAAAACTGAGTTGGACTTTACGCGATATATTGTAAGTCACTCAAGTAAGTTAGAGATGGTAAAGATTTTCACACCCAGTTTAAAGAAAAGAAGAGTAGAAAAAAGCTTACGCAAGGGGTCAAAGAAATCCTCCGTACTAGTATGGGTATGACGTTTACACACATTCTTTTCTTCAATATAGAGTTTAGATAGTTTCTGTTTTAGAACATTCATCCTCTCTTATTGTTCTAGATATTAACTCCGACCACCAACACAACTTTGTATCTCTTGAATTTATATTATACTATTACATTCATGGTTGAGAATAAGACTGTTTTTCTTAAAATAAATAAATTATATCCTCTTAAATTTTTTAACTTTTTTAATTTTTTTTATCGGTATACTATTATTTATGTTTACAATCATAAAATCAATTAATCAATATTTGTTACAGGATATTAATTCAATTGAAGATCATATGGATGCCTTCGAGGATTCAATCAAGACCGCTCTTACACTTTTAATCTAG

Protein sequence

>MS.gene07668.t1

MACSDEEHDRLSNLSDDLICHILSFLSTKECYRTCVLSTRWESICTKIPNLHFQLPEIFDPVISKEIKFVNVALLRRTENIRKLRLDSEKGCQPHDVHMWVSKALDLKVQELDLGLFLHEKILLPLQLSTCESLVVLKLRGKIQPTLNSSFHVYLPSLKILHLRETVRYSMFDDGKEYDLNNFLSGCPLLEELLLTETFRKPINISFHLLKRLYLSLSMPTSIIKCCPLQINAPSLEVLGIYDFSLTPRKYEFTNLSNLDRAAFFICEHPDFNSLNTLKKGLSNVKSLALGSKTFHFLSMEDKLDNLHLLTFHNLLFLSVEISENCSWNMLISFLQNAPKLKDLTIADINSIEDHMDAFEDSIKTALTLLI