Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07666.t1 | AES88476.2 | 90.4 | 491 | 47 | 0 | 1 | 491 | 92 | 582 | 1.70E-230 | 808.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07666.t1 | Q3EAE5 | 27.1 | 468 | 261 | 16 | 9 | 452 | 2 | 413 | 5.0e-21 | 104.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07666.t1 | G7JM43 | 90.4 | 491 | 47 | 0 | 1 | 491 | 92 | 582 | 1.2e-230 | 808.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07666.t1 | MTR_4g055580 | 90.224 | 491 | 48 | 0 | 1 | 491 | 92 | 582 | 0.0 | 892 |
MS.gene07666.t1 | MTR_4g055990 | 83.936 | 498 | 74 | 2 | 1 | 492 | 1 | 498 | 0.0 | 818 |
MS.gene07666.t1 | MTR_4g055990 | 82.036 | 501 | 79 | 4 | 1 | 495 | 1 | 496 | 0.0 | 795 |
MS.gene07666.t1 | MTR_4g056020 | 79.716 | 493 | 62 | 3 | 1 | 492 | 1 | 456 | 0.0 | 769 |
MS.gene07666.t1 | MTR_4g056040 | 80.169 | 474 | 86 | 3 | 1 | 473 | 1 | 467 | 0.0 | 752 |
MS.gene07666.t1 | MTR_4g056030 | 77.869 | 488 | 70 | 3 | 1 | 487 | 1 | 451 | 0.0 | 742 |
MS.gene07666.t1 | MTR_4g056070 | 80.778 | 437 | 80 | 2 | 1 | 433 | 1 | 437 | 0.0 | 704 |
MS.gene07666.t1 | MTR_1g038710 | 63.505 | 485 | 131 | 5 | 1 | 478 | 11 | 456 | 0.0 | 551 |
MS.gene07666.t1 | MTR_1g090883 | 56.667 | 390 | 127 | 5 | 2 | 388 | 12 | 362 | 3.79e-132 | 387 |
MS.gene07666.t1 | MTR_7g110920 | 55.587 | 358 | 101 | 6 | 136 | 473 | 1 | 320 | 2.74e-116 | 345 |
MS.gene07666.t1 | MTR_4g056020 | 84.277 | 159 | 25 | 0 | 333 | 491 | 1 | 159 | 1.60e-88 | 268 |
MS.gene07666.t1 | MTR_4g093690 | 46.926 | 309 | 117 | 7 | 1 | 304 | 10 | 276 | 3.34e-71 | 228 |
MS.gene07666.t1 | MTR_1g090900 | 54.206 | 214 | 58 | 4 | 1 | 211 | 1 | 177 | 1.25e-57 | 190 |
MS.gene07666.t1 | MTR_4g056010 | 87.000 | 100 | 13 | 0 | 105 | 204 | 1 | 100 | 5.68e-55 | 179 |
MS.gene07666.t1 | MTR_1g090890 | 60.440 | 91 | 30 | 2 | 386 | 473 | 29 | 116 | 2.99e-28 | 108 |
MS.gene07666.t1 | MTR_5g080710 | 29.039 | 458 | 246 | 14 | 9 | 452 | 33 | 425 | 9.98e-27 | 112 |
MS.gene07666.t1 | MTR_4g032730 | 28.842 | 475 | 249 | 21 | 9 | 447 | 15 | 436 | 1.60e-24 | 106 |
MS.gene07666.t1 | MTR_5g084070 | 28.633 | 461 | 246 | 17 | 5 | 452 | 9 | 399 | 1.68e-24 | 106 |
MS.gene07666.t1 | MTR_8g445780 | 27.765 | 443 | 239 | 14 | 7 | 432 | 11 | 389 | 1.11e-23 | 103 |
MS.gene07666.t1 | MTR_8g014260 | 24.850 | 499 | 275 | 14 | 6 | 470 | 13 | 445 | 5.77e-22 | 99.0 |
MS.gene07666.t1 | MTR_8g058970 | 27.350 | 468 | 277 | 18 | 4 | 447 | 14 | 442 | 6.01e-22 | 99.0 |
MS.gene07666.t1 | MTR_8g468810 | 28.289 | 456 | 252 | 19 | 4 | 439 | 20 | 420 | 5.60e-21 | 95.9 |
MS.gene07666.t1 | MTR_7g007080 | 28.352 | 455 | 209 | 22 | 7 | 447 | 2 | 353 | 1.45e-20 | 94.0 |
MS.gene07666.t1 | MTR_7g056433 | 25.721 | 451 | 227 | 17 | 4 | 447 | 7 | 356 | 2.52e-20 | 93.2 |
MS.gene07666.t1 | MTR_2g007400 | 25.207 | 484 | 254 | 17 | 9 | 476 | 12 | 403 | 3.47e-20 | 92.8 |
MS.gene07666.t1 | MTR_8g062270 | 28.634 | 454 | 264 | 19 | 9 | 447 | 16 | 424 | 4.34e-20 | 93.2 |
MS.gene07666.t1 | MTR_7g115270 | 25.219 | 456 | 236 | 14 | 9 | 452 | 12 | 374 | 1.31e-19 | 91.3 |
MS.gene07666.t1 | MTR_3g108560 | 26.517 | 445 | 219 | 15 | 6 | 447 | 17 | 356 | 1.20e-18 | 88.2 |
MS.gene07666.t1 | MTR_8g467800 | 28.319 | 452 | 249 | 16 | 5 | 436 | 16 | 412 | 2.90e-18 | 87.8 |
MS.gene07666.t1 | MTR_3g048290 | 27.015 | 459 | 274 | 16 | 5 | 447 | 19 | 432 | 4.52e-18 | 87.0 |
MS.gene07666.t1 | MTR_2g083840 | 27.887 | 459 | 254 | 19 | 9 | 447 | 21 | 422 | 2.28e-17 | 84.7 |
MS.gene07666.t1 | MTR_4g039440 | 24.773 | 440 | 233 | 17 | 9 | 447 | 34 | 376 | 5.05e-17 | 83.6 |
MS.gene07666.t1 | MTR_7g060470 | 24.781 | 456 | 251 | 18 | 9 | 459 | 3 | 371 | 1.00e-16 | 82.4 |
MS.gene07666.t1 | MTR_8g468810 | 29.073 | 399 | 212 | 18 | 4 | 382 | 20 | 367 | 1.05e-16 | 82.0 |
MS.gene07666.t1 | MTR_3g082890 | 25.330 | 454 | 234 | 16 | 6 | 447 | 94 | 454 | 2.60e-16 | 81.6 |
MS.gene07666.t1 | MTR_3g109982 | 25.896 | 502 | 269 | 18 | 9 | 463 | 13 | 458 | 4.39e-16 | 81.6 |
MS.gene07666.t1 | MTR_8g468810 | 29.794 | 339 | 173 | 15 | 4 | 326 | 20 | 309 | 4.82e-16 | 79.7 |
MS.gene07666.t1 | MTR_8g468840 | 27.706 | 462 | 258 | 20 | 8 | 447 | 13 | 420 | 5.05e-16 | 80.9 |
MS.gene07666.t1 | MTR_8g468810 | 29.794 | 339 | 173 | 15 | 4 | 326 | 20 | 309 | 5.64e-16 | 79.7 |
MS.gene07666.t1 | MTR_8g468810 | 29.794 | 339 | 173 | 15 | 4 | 326 | 20 | 309 | 5.90e-16 | 79.3 |
MS.gene07666.t1 | MTR_2g007450 | 24.444 | 450 | 272 | 13 | 1 | 447 | 8 | 392 | 1.08e-15 | 79.3 |
MS.gene07666.t1 | MTR_8g014160 | 26.477 | 457 | 224 | 18 | 4 | 447 | 36 | 393 | 2.01e-15 | 78.6 |
MS.gene07666.t1 | MTR_5g007410 | 25.664 | 452 | 242 | 19 | 11 | 460 | 28 | 387 | 2.26e-15 | 78.6 |
MS.gene07666.t1 | MTR_3g087260 | 28.778 | 483 | 240 | 18 | 9 | 452 | 12 | 429 | 7.48e-15 | 77.0 |
MS.gene07666.t1 | MTR_1g066830 | 24.945 | 453 | 243 | 18 | 9 | 459 | 8 | 365 | 1.61e-14 | 75.5 |
MS.gene07666.t1 | MTR_5g039950 | 27.171 | 449 | 233 | 15 | 9 | 447 | 23 | 387 | 2.41e-14 | 75.5 |
MS.gene07666.t1 | MTR_4g080773 | 26.813 | 455 | 278 | 15 | 9 | 447 | 19 | 434 | 1.21e-13 | 73.6 |
MS.gene07666.t1 | MTR_4g080773 | 26.898 | 461 | 270 | 19 | 9 | 447 | 19 | 434 | 1.28e-13 | 73.6 |
MS.gene07666.t1 | MTR_7g098570 | 31.556 | 225 | 106 | 7 | 9 | 230 | 20 | 199 | 1.33e-13 | 73.2 |
MS.gene07666.t1 | MTR_8g058965 | 26.819 | 481 | 250 | 24 | 9 | 452 | 13 | 428 | 1.61e-13 | 72.8 |
MS.gene07666.t1 | MTR_4g080787 | 27.195 | 467 | 258 | 25 | 9 | 447 | 19 | 431 | 1.75e-13 | 73.2 |
MS.gene07666.t1 | MTR_2g094750 | 28.365 | 416 | 238 | 19 | 11 | 397 | 92 | 476 | 1.99e-13 | 72.8 |
MS.gene07666.t1 | MTR_8g017280 | 28.136 | 295 | 156 | 10 | 7 | 295 | 34 | 278 | 2.20e-13 | 71.2 |
MS.gene07666.t1 | MTR_8g017280 | 27.019 | 322 | 171 | 11 | 7 | 314 | 34 | 305 | 2.91e-13 | 72.0 |
MS.gene07666.t1 | MTR_7g055943 | 25.439 | 456 | 228 | 21 | 3 | 447 | 34 | 388 | 5.19e-13 | 71.2 |
MS.gene07666.t1 | MTR_8g467800 | 27.200 | 375 | 201 | 12 | 5 | 364 | 16 | 333 | 2.82e-12 | 68.6 |
MS.gene07666.t1 | MTR_5g045170 | 29.464 | 224 | 110 | 8 | 11 | 230 | 16 | 195 | 2.92e-12 | 68.6 |
MS.gene07666.t1 | MTR_1g013560 | 29.060 | 234 | 120 | 6 | 5 | 232 | 15 | 208 | 6.34e-12 | 67.4 |
MS.gene07666.t1 | MTR_1g013560 | 29.487 | 234 | 119 | 7 | 5 | 232 | 15 | 208 | 9.17e-12 | 67.4 |
MS.gene07666.t1 | MTR_6g044572 | 30.213 | 235 | 129 | 9 | 9 | 232 | 2 | 212 | 1.71e-11 | 66.2 |
MS.gene07666.t1 | MTR_6g044560 | 30.417 | 240 | 122 | 10 | 9 | 232 | 178 | 388 | 2.19e-11 | 66.6 |
MS.gene07666.t1 | MTR_5g040850 | 24.242 | 462 | 257 | 16 | 4 | 447 | 2 | 388 | 3.02e-11 | 65.9 |
MS.gene07666.t1 | MTR_7g110910 | 81.579 | 38 | 7 | 0 | 1 | 38 | 158 | 195 | 6.09e-11 | 62.4 |
MS.gene07666.t1 | MTR_5g073420 | 27.803 | 223 | 122 | 5 | 9 | 230 | 11 | 195 | 6.26e-11 | 64.7 |
MS.gene07666.t1 | MTR_8g062080 | 29.661 | 236 | 119 | 8 | 1 | 230 | 15 | 209 | 7.16e-11 | 64.7 |
MS.gene07666.t1 | MTR_5g008950 | 31.132 | 106 | 68 | 2 | 347 | 449 | 233 | 336 | 8.04e-11 | 64.3 |
MS.gene07666.t1 | MTR_7g034110 | 26.693 | 251 | 133 | 8 | 9 | 250 | 11 | 219 | 9.92e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07666.t1 | AT4G10400 | 28.908 | 467 | 260 | 18 | 9 | 469 | 2 | 402 | 5.80e-30 | 121 |
MS.gene07666.t1 | AT4G10400 | 28.908 | 467 | 260 | 18 | 9 | 469 | 2 | 402 | 5.80e-30 | 121 |
MS.gene07666.t1 | AT4G10400 | 28.908 | 467 | 260 | 18 | 9 | 469 | 2 | 402 | 5.80e-30 | 121 |
MS.gene07666.t1 | AT4G00315 | 28.112 | 466 | 259 | 18 | 9 | 452 | 2 | 413 | 1.46e-27 | 115 |
MS.gene07666.t1 | AT1G55660 | 27.468 | 466 | 262 | 18 | 9 | 452 | 53 | 464 | 1.54e-26 | 112 |
MS.gene07666.t1 | AT4G26340 | 27.902 | 448 | 250 | 17 | 9 | 446 | 2 | 386 | 6.19e-26 | 110 |
MS.gene07666.t1 | AT3G50710 | 28.542 | 480 | 263 | 18 | 9 | 469 | 2 | 420 | 2.13e-25 | 108 |
MS.gene07666.t1 | AT3G59160 | 28.873 | 426 | 232 | 16 | 9 | 396 | 13 | 405 | 8.21e-25 | 107 |
MS.gene07666.t1 | AT4G14103 | 28.708 | 418 | 203 | 15 | 9 | 392 | 8 | 364 | 2.32e-24 | 105 |
MS.gene07666.t1 | AT4G14103 | 28.708 | 418 | 203 | 15 | 9 | 392 | 8 | 364 | 2.32e-24 | 105 |
MS.gene07666.t1 | AT1G58310 | 30.075 | 399 | 222 | 15 | 9 | 381 | 8 | 375 | 3.93e-24 | 105 |
MS.gene07666.t1 | AT3G59170 | 28.604 | 437 | 234 | 15 | 9 | 402 | 7 | 408 | 4.03e-24 | 105 |
MS.gene07666.t1 | AT4G14103 | 29.167 | 408 | 192 | 16 | 9 | 381 | 8 | 353 | 4.61e-24 | 105 |
MS.gene07666.t1 | AT5G38396 | 30.075 | 399 | 211 | 15 | 9 | 382 | 2 | 357 | 1.05e-23 | 104 |
MS.gene07666.t1 | AT2G26860 | 28.285 | 449 | 258 | 13 | 9 | 447 | 2 | 396 | 1.19e-23 | 103 |
MS.gene07666.t1 | AT2G26860 | 28.285 | 449 | 258 | 13 | 9 | 447 | 2 | 396 | 1.19e-23 | 103 |
MS.gene07666.t1 | AT3G59190 | 27.708 | 397 | 225 | 11 | 9 | 382 | 12 | 369 | 1.11e-22 | 100 |
MS.gene07666.t1 | AT4G14096 | 28.186 | 408 | 201 | 16 | 8 | 386 | 7 | 351 | 1.99e-22 | 100 |
MS.gene07666.t1 | AT4G14096 | 28.186 | 408 | 201 | 16 | 8 | 386 | 7 | 351 | 1.99e-22 | 100 |
MS.gene07666.t1 | AT3G59190 | 27.960 | 397 | 224 | 12 | 9 | 382 | 12 | 369 | 2.45e-22 | 100 |
MS.gene07666.t1 | AT4G13965 | 27.079 | 469 | 248 | 20 | 9 | 458 | 10 | 403 | 4.33e-22 | 99.0 |
MS.gene07666.t1 | AT5G56380 | 25.277 | 451 | 254 | 14 | 9 | 435 | 2 | 393 | 4.35e-22 | 99.0 |
MS.gene07666.t1 | AT5G56380 | 25.277 | 451 | 254 | 14 | 9 | 435 | 2 | 393 | 4.35e-22 | 99.0 |
MS.gene07666.t1 | AT5G56400 | 27.601 | 471 | 237 | 23 | 9 | 453 | 33 | 425 | 1.54e-21 | 97.4 |
MS.gene07666.t1 | AT5G38590 | 26.752 | 471 | 256 | 16 | 9 | 461 | 2 | 401 | 3.55e-21 | 95.9 |
MS.gene07666.t1 | AT5G56370 | 27.176 | 471 | 267 | 15 | 9 | 471 | 2 | 404 | 4.02e-21 | 95.9 |
MS.gene07666.t1 | AT5G56370 | 27.176 | 471 | 267 | 15 | 9 | 471 | 2 | 404 | 4.02e-21 | 95.9 |
MS.gene07666.t1 | AT1G51370 | 27.549 | 461 | 259 | 18 | 7 | 456 | 17 | 413 | 5.50e-21 | 95.9 |
MS.gene07666.t1 | AT5G22670 | 27.609 | 460 | 248 | 17 | 8 | 444 | 10 | 407 | 6.52e-21 | 95.5 |
MS.gene07666.t1 | AT1G55660 | 28.134 | 359 | 189 | 15 | 9 | 347 | 53 | 362 | 1.03e-20 | 94.0 |
MS.gene07666.t1 | AT1G32375 | 27.119 | 472 | 257 | 17 | 9 | 463 | 2 | 403 | 3.54e-20 | 93.2 |
MS.gene07666.t1 | AT1G32375 | 27.119 | 472 | 257 | 17 | 9 | 463 | 2 | 403 | 3.54e-20 | 93.2 |
MS.gene07666.t1 | AT3G58920 | 26.492 | 419 | 226 | 14 | 9 | 391 | 2 | 374 | 5.56e-20 | 93.2 |
MS.gene07666.t1 | AT5G60610 | 27.578 | 446 | 255 | 16 | 9 | 447 | 2 | 386 | 6.91e-20 | 92.0 |
MS.gene07666.t1 | AT5G60610 | 27.578 | 446 | 255 | 16 | 9 | 447 | 2 | 386 | 6.91e-20 | 92.0 |
MS.gene07666.t1 | AT4G00320 | 28.810 | 420 | 235 | 16 | 3 | 397 | 7 | 387 | 9.43e-20 | 92.4 |
MS.gene07666.t1 | AT5G41830 | 27.962 | 422 | 240 | 14 | 3 | 399 | 7 | 389 | 1.18e-19 | 92.4 |
MS.gene07666.t1 | AT3G59230 | 26.337 | 486 | 266 | 13 | 9 | 452 | 12 | 447 | 2.45e-19 | 91.3 |
MS.gene07666.t1 | AT3G03030 | 26.566 | 399 | 226 | 9 | 9 | 380 | 2 | 360 | 2.56e-19 | 90.9 |
MS.gene07666.t1 | AT3G52680 | 27.511 | 458 | 246 | 15 | 9 | 449 | 21 | 409 | 2.95e-19 | 90.9 |
MS.gene07666.t1 | AT2G04230 | 26.939 | 490 | 277 | 18 | 8 | 477 | 12 | 440 | 6.10e-19 | 89.7 |
MS.gene07666.t1 | AT4G22280 | 29.310 | 406 | 210 | 14 | 9 | 398 | 2 | 346 | 1.35e-18 | 88.2 |
MS.gene07666.t1 | AT5G41840 | 27.805 | 410 | 219 | 12 | 9 | 381 | 14 | 383 | 1.67e-18 | 89.0 |
MS.gene07666.t1 | AT4G10420 | 29.375 | 320 | 189 | 11 | 136 | 447 | 1 | 291 | 2.07e-18 | 86.7 |
MS.gene07666.t1 | AT4G26350 | 24.236 | 458 | 259 | 16 | 9 | 444 | 2 | 393 | 7.62e-18 | 86.3 |
MS.gene07666.t1 | AT4G22280 | 29.744 | 390 | 197 | 14 | 9 | 382 | 2 | 330 | 1.14e-17 | 84.7 |
MS.gene07666.t1 | AT3G03040 | 25.369 | 406 | 219 | 12 | 9 | 381 | 2 | 356 | 1.67e-17 | 85.5 |
MS.gene07666.t1 | AT3G59210 | 27.182 | 401 | 222 | 12 | 5 | 381 | 3 | 357 | 2.14e-17 | 85.1 |
MS.gene07666.t1 | AT3G59210 | 27.182 | 401 | 222 | 12 | 5 | 381 | 3 | 357 | 2.14e-17 | 85.1 |
MS.gene07666.t1 | AT3G59210 | 27.182 | 401 | 222 | 12 | 5 | 381 | 3 | 357 | 2.14e-17 | 85.1 |
MS.gene07666.t1 | AT3G59210 | 27.182 | 401 | 222 | 12 | 5 | 381 | 3 | 357 | 2.14e-17 | 85.1 |
MS.gene07666.t1 | AT3G59210 | 27.182 | 401 | 222 | 12 | 5 | 381 | 3 | 357 | 2.14e-17 | 85.1 |
MS.gene07666.t1 | AT3G58960 | 28.293 | 410 | 212 | 17 | 9 | 389 | 2 | 358 | 2.73e-17 | 84.7 |
MS.gene07666.t1 | AT3G03030 | 27.066 | 351 | 193 | 8 | 9 | 332 | 2 | 316 | 3.07e-17 | 83.2 |
MS.gene07666.t1 | AT1G51370 | 27.990 | 418 | 227 | 17 | 7 | 414 | 17 | 370 | 3.28e-17 | 84.0 |
MS.gene07666.t1 | AT5G56410 | 28.118 | 473 | 271 | 24 | 9 | 461 | 2 | 425 | 4.33e-17 | 84.3 |
MS.gene07666.t1 | AT5G22700 | 26.539 | 471 | 239 | 18 | 9 | 444 | 6 | 404 | 5.47e-17 | 83.6 |
MS.gene07666.t1 | AT5G22700 | 26.539 | 471 | 239 | 18 | 9 | 444 | 6 | 404 | 5.47e-17 | 83.6 |
MS.gene07666.t1 | AT5G22700 | 26.539 | 471 | 239 | 18 | 9 | 444 | 6 | 404 | 5.47e-17 | 83.6 |
MS.gene07666.t1 | AT5G22700 | 26.539 | 471 | 239 | 18 | 9 | 444 | 6 | 404 | 5.47e-17 | 83.6 |
MS.gene07666.t1 | AT5G22700 | 26.539 | 471 | 239 | 18 | 9 | 444 | 43 | 441 | 8.65e-17 | 83.2 |
MS.gene07666.t1 | AT5G56820 | 25.263 | 475 | 275 | 17 | 9 | 478 | 15 | 414 | 1.19e-16 | 82.4 |
MS.gene07666.t1 | AT3G59200 | 27.928 | 444 | 229 | 19 | 8 | 415 | 6 | 394 | 1.39e-16 | 82.8 |
MS.gene07666.t1 | AT1G16930 | 27.651 | 481 | 259 | 22 | 9 | 472 | 15 | 423 | 1.98e-16 | 82.0 |
MS.gene07666.t1 | AT1G16930 | 27.651 | 481 | 259 | 22 | 9 | 472 | 15 | 423 | 1.98e-16 | 82.0 |
MS.gene07666.t1 | AT1G16930 | 27.651 | 481 | 259 | 22 | 9 | 472 | 15 | 423 | 1.98e-16 | 82.0 |
MS.gene07666.t1 | AT5G53840 | 27.609 | 460 | 245 | 19 | 7 | 447 | 16 | 406 | 2.15e-16 | 82.0 |
MS.gene07666.t1 | AT1G78760 | 25.996 | 477 | 254 | 20 | 7 | 455 | 14 | 419 | 3.14e-16 | 81.3 |
MS.gene07666.t1 | AT5G53635 | 26.452 | 465 | 251 | 22 | 11 | 447 | 2 | 403 | 5.44e-16 | 80.5 |
MS.gene07666.t1 | AT3G49030 | 26.439 | 469 | 268 | 17 | 7 | 463 | 19 | 422 | 6.41e-16 | 80.5 |
MS.gene07666.t1 | AT3G54910 | 27.763 | 371 | 234 | 13 | 112 | 474 | 29 | 373 | 7.24e-16 | 79.7 |
MS.gene07666.t1 | AT3G54910 | 27.763 | 371 | 234 | 13 | 112 | 474 | 29 | 373 | 7.24e-16 | 79.7 |
MS.gene07666.t1 | AT3G54910 | 27.763 | 371 | 234 | 13 | 112 | 474 | 29 | 373 | 7.24e-16 | 79.7 |
MS.gene07666.t1 | AT5G38570 | 24.788 | 472 | 240 | 15 | 9 | 469 | 2 | 369 | 8.29e-16 | 79.7 |
MS.gene07666.t1 | AT4G09920 | 28.614 | 332 | 176 | 13 | 9 | 331 | 2 | 281 | 1.08e-15 | 78.6 |
MS.gene07666.t1 | AT4G09920 | 28.614 | 332 | 176 | 13 | 9 | 331 | 2 | 281 | 1.08e-15 | 78.6 |
MS.gene07666.t1 | AT5G56700 | 30.060 | 336 | 188 | 14 | 130 | 449 | 48 | 352 | 1.13e-15 | 79.0 |
MS.gene07666.t1 | AT3G58980 | 26.098 | 410 | 228 | 13 | 9 | 392 | 2 | 362 | 1.49e-15 | 79.7 |
MS.gene07666.t1 | AT2G26030 | 26.509 | 464 | 253 | 21 | 9 | 445 | 4 | 406 | 1.57e-15 | 79.3 |
MS.gene07666.t1 | AT2G26030 | 26.509 | 464 | 253 | 21 | 9 | 445 | 4 | 406 | 1.57e-15 | 79.3 |
MS.gene07666.t1 | AT5G44950 | 24.138 | 464 | 265 | 15 | 9 | 447 | 4 | 405 | 1.78e-15 | 79.0 |
MS.gene07666.t1 | AT1G66310 | 26.899 | 487 | 270 | 19 | 4 | 469 | 14 | 435 | 1.79e-15 | 79.0 |
MS.gene07666.t1 | AT1G78750 | 25.625 | 480 | 275 | 18 | 2 | 455 | 11 | 434 | 2.23e-15 | 79.0 |
MS.gene07666.t1 | AT1G78750 | 25.625 | 480 | 275 | 18 | 2 | 455 | 11 | 434 | 2.23e-15 | 79.0 |
MS.gene07666.t1 | AT4G09920 | 28.701 | 331 | 175 | 13 | 9 | 330 | 2 | 280 | 3.01e-15 | 76.6 |
MS.gene07666.t1 | AT4G09920 | 28.701 | 331 | 175 | 13 | 9 | 330 | 2 | 280 | 3.01e-15 | 76.6 |
MS.gene07666.t1 | AT4G09920 | 28.701 | 331 | 175 | 13 | 9 | 330 | 2 | 280 | 3.01e-15 | 76.6 |
MS.gene07666.t1 | AT2G26030 | 26.078 | 464 | 260 | 20 | 9 | 445 | 4 | 411 | 3.19e-15 | 78.2 |
MS.gene07666.t1 | AT2G42720 | 28.321 | 399 | 205 | 16 | 9 | 381 | 2 | 345 | 4.70e-15 | 77.8 |
MS.gene07666.t1 | AT1G69630 | 27.970 | 404 | 215 | 15 | 2 | 382 | 11 | 361 | 8.37e-15 | 77.0 |
MS.gene07666.t1 | AT3G56780 | 23.962 | 530 | 275 | 19 | 11 | 475 | 9 | 475 | 2.11e-14 | 75.9 |
MS.gene07666.t1 | AT4G13960 | 26.972 | 393 | 224 | 14 | 9 | 382 | 2 | 350 | 6.40e-14 | 74.3 |
MS.gene07666.t1 | AT4G13960 | 26.972 | 393 | 224 | 14 | 9 | 382 | 2 | 350 | 6.40e-14 | 74.3 |
MS.gene07666.t1 | AT5G38386 | 24.479 | 384 | 193 | 12 | 9 | 382 | 2 | 298 | 7.19e-14 | 73.9 |
MS.gene07666.t1 | AT5G38386 | 24.479 | 384 | 193 | 12 | 9 | 382 | 2 | 298 | 7.19e-14 | 73.9 |
MS.gene07666.t1 | AT1G51370 | 27.506 | 389 | 204 | 18 | 7 | 383 | 17 | 339 | 8.07e-14 | 73.2 |
MS.gene07666.t1 | AT5G22660 | 26.483 | 472 | 244 | 19 | 9 | 447 | 13 | 414 | 1.08e-13 | 73.6 |
MS.gene07666.t1 | AT3G51530 | 26.923 | 468 | 248 | 20 | 9 | 455 | 30 | 424 | 1.17e-13 | 73.6 |
MS.gene07666.t1 | AT2G29930 | 28.250 | 400 | 197 | 23 | 9 | 382 | 12 | 347 | 1.33e-13 | 73.2 |
MS.gene07666.t1 | AT2G29930 | 28.250 | 400 | 197 | 23 | 9 | 382 | 12 | 347 | 1.33e-13 | 73.2 |
MS.gene07666.t1 | AT5G56370 | 27.704 | 379 | 200 | 13 | 9 | 380 | 2 | 313 | 1.43e-13 | 72.0 |
MS.gene07666.t1 | AT5G38590 | 28.024 | 339 | 173 | 13 | 9 | 335 | 2 | 281 | 1.68e-13 | 71.6 |
MS.gene07666.t1 | AT2G42730 | 25.272 | 459 | 278 | 16 | 9 | 447 | 5 | 418 | 2.25e-13 | 72.4 |
MS.gene07666.t1 | AT5G56690 | 27.253 | 455 | 256 | 19 | 11 | 448 | 4 | 400 | 2.90e-13 | 72.0 |
MS.gene07666.t1 | AT1G66290 | 26.415 | 477 | 256 | 18 | 4 | 455 | 24 | 430 | 3.14e-13 | 72.0 |
MS.gene07666.t1 | AT4G13985 | 28.537 | 410 | 214 | 18 | 4 | 386 | 14 | 371 | 3.29e-13 | 72.0 |
MS.gene07666.t1 | AT5G35995 | 26.263 | 396 | 212 | 16 | 9 | 382 | 5 | 342 | 3.61e-13 | 72.0 |
MS.gene07666.t1 | AT5G35995 | 26.263 | 396 | 212 | 16 | 9 | 382 | 5 | 342 | 3.61e-13 | 72.0 |
MS.gene07666.t1 | AT5G22730 | 25.800 | 469 | 254 | 16 | 8 | 445 | 27 | 432 | 4.23e-13 | 71.6 |
MS.gene07666.t1 | AT5G22730 | 25.800 | 469 | 254 | 16 | 8 | 445 | 27 | 432 | 4.23e-13 | 71.6 |
MS.gene07666.t1 | AT3G26930 | 27.213 | 305 | 182 | 12 | 155 | 445 | 80 | 358 | 9.86e-13 | 70.5 |
MS.gene07666.t1 | AT3G26930 | 27.213 | 305 | 182 | 12 | 155 | 445 | 125 | 403 | 1.04e-12 | 70.5 |
MS.gene07666.t1 | AT3G58900 | 27.182 | 401 | 221 | 13 | 9 | 382 | 2 | 358 | 1.10e-12 | 70.5 |
MS.gene07666.t1 | AT3G59180 | 27.922 | 308 | 179 | 11 | 101 | 381 | 33 | 324 | 1.11e-12 | 70.5 |
MS.gene07666.t1 | AT1G05080 | 26.911 | 327 | 206 | 11 | 133 | 447 | 103 | 408 | 4.88e-12 | 68.2 |
MS.gene07666.t1 | AT3G60040 | 27.041 | 392 | 227 | 15 | 9 | 382 | 13 | 363 | 1.11e-11 | 67.8 |
MS.gene07666.t1 | AT5G22730 | 30.769 | 234 | 110 | 8 | 8 | 236 | 27 | 213 | 1.27e-11 | 66.6 |
MS.gene07666.t1 | AT5G25850 | 31.004 | 229 | 103 | 11 | 9 | 233 | 20 | 197 | 1.49e-11 | 67.0 |
MS.gene07666.t1 | AT1G52650 | 23.504 | 468 | 276 | 12 | 9 | 447 | 2 | 416 | 1.51e-11 | 67.0 |
MS.gene07666.t1 | AT3G60040 | 27.041 | 392 | 227 | 15 | 9 | 382 | 232 | 582 | 1.58e-11 | 67.4 |
MS.gene07666.t1 | AT3G60040 | 27.041 | 392 | 227 | 15 | 9 | 382 | 233 | 583 | 1.63e-11 | 67.4 |
MS.gene07666.t1 | AT5G56390 | 26.159 | 302 | 188 | 9 | 157 | 449 | 119 | 394 | 1.78e-11 | 66.6 |
MS.gene07666.t1 | AT3G60040 | 26.992 | 389 | 231 | 15 | 9 | 382 | 230 | 580 | 2.23e-11 | 66.6 |
MS.gene07666.t1 | AT3G60040 | 26.992 | 389 | 231 | 15 | 9 | 382 | 232 | 582 | 2.40e-11 | 66.6 |
MS.gene07666.t1 | AT5G25860 | 26.992 | 389 | 234 | 16 | 9 | 382 | 12 | 365 | 2.80e-11 | 65.9 |
MS.gene07666.t1 | AT3G58900 | 26.596 | 376 | 196 | 13 | 9 | 357 | 2 | 324 | 9.61e-11 | 63.5 |
MS.gene07666.t1 | AT3G58900 | 26.596 | 376 | 196 | 13 | 9 | 357 | 2 | 324 | 9.61e-11 | 63.5 |
Find 87 sgRNAs with CRISPR-Local
Find 121 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCATTACATTTGAATTTAT+TGG | 0.069289 | 4.1:+42457806 | MS.gene07666:CDS |
AGAAATCCTCCTTATTAGTA+TGG | 0.246268 | 4.1:+42457963 | MS.gene07666:CDS |
ATTACAAGATCCTTAAGTTT+TGG | 0.265287 | 4.1:-42457395 | None:intergenic |
TAAAGATTGGAATTCTTCTT+TGG | 0.289144 | 4.1:-42456368 | None:intergenic |
GGACAGCAAGATTTAAAGAT+TGG | 0.302591 | 4.1:-42456381 | None:intergenic |
TTGAGTGACTTACAATATAT+CGG | 0.302926 | 4.1:-42457862 | None:intergenic |
TCTATCTGGTTGCCCACATT+TGG | 0.327647 | 4.1:+42456837 | MS.gene07666:CDS |
GTTTCCAACCTCCTTTCTTC+GGG | 0.367541 | 4.1:-42457735 | None:intergenic |
AGTTTCCAACCTCCTTTCTT+CGG | 0.370618 | 4.1:-42457736 | None:intergenic |
TAATTCAATTGAAGATCATA+TGG | 0.373911 | 4.1:+42458278 | MS.gene07666:CDS |
TCTTGTGGTCTTAAAATTGC+GGG | 0.379974 | 4.1:+42456687 | MS.gene07666:CDS |
AAAATGAAGGTTGGGAATCT+TGG | 0.391051 | 4.1:-42456314 | None:intergenic |
ACGTCATACCCATACTAATA+AGG | 0.394942 | 4.1:-42457972 | None:intergenic |
ACTTTCTAATGTCAAATCAT+TGG | 0.410912 | 4.1:+42457128 | MS.gene07666:CDS |
AATAGCAGCTTCATCAAGAT+TGG | 0.411607 | 4.1:-42457055 | None:intergenic |
AGACTGGTTGTAAGACATTC+CGG | 0.414331 | 4.1:-42457785 | None:intergenic |
ACAGATCCAAGTCAAGTTCC+TGG | 0.422138 | 4.1:-42456615 | None:intergenic |
ACAGAAGGCTCCAAAACTTA+AGG | 0.424972 | 4.1:+42457385 | MS.gene07666:CDS |
ATCTGGTTGCCCACATTTGG+AGG | 0.433975 | 4.1:+42456840 | MS.gene07666:CDS |
GGTAATTGAAAATGAAGGTT+GGG | 0.436496 | 4.1:-42456322 | None:intergenic |
CTAAGGCTCGAGAGCGAGAA+AGG | 0.450221 | 4.1:+42456538 | MS.gene07666:CDS |
CAAGGTCCAGGAACTTGACT+TGG | 0.457085 | 4.1:+42456609 | MS.gene07666:CDS |
ACCCACATGTGTACATCATT+TGG | 0.460055 | 4.1:-42456568 | None:intergenic |
AAGTGAAAAGAGGTGTTGAT+AGG | 0.462824 | 4.1:-42456892 | None:intergenic |
CTAATGCTTGATAGTGAGAA+AGG | 0.465706 | 4.1:+42456430 | MS.gene07666:CDS |
CTCTAGTTGGGTGGAGCCAT+CGG | 0.471958 | 4.1:+42457757 | MS.gene07666:CDS |
TGAAATCAATTCCCGAAGAA+AGG | 0.482837 | 4.1:+42457724 | MS.gene07666:CDS |
ACCCATGTGTGTACATCATA+TGG | 0.485904 | 4.1:-42456460 | None:intergenic |
CGGAAAATCTAAGAAAACTA+AGG | 0.486921 | 4.1:+42456521 | MS.gene07666:CDS |
TGTAAGTCACTCAAGTAAGT+TGG | 0.491102 | 4.1:+42457871 | MS.gene07666:CDS |
GGCATTAGATCTCAAGGTCC+AGG | 0.496808 | 4.1:+42456597 | MS.gene07666:CDS |
AGATCATATGGATGTCTTCA+AGG | 0.506574 | 4.1:+42458290 | MS.gene07666:CDS |
AGGAGGTTGGAAACTCTAGT+TGG | 0.514515 | 4.1:+42457744 | MS.gene07666:CDS |
CTCTTGTGGTCTTAAAATTG+CGG | 0.517772 | 4.1:+42456686 | MS.gene07666:CDS |
ATGTCTTCAAGGATTCAATC+AGG | 0.520402 | 4.1:+42458301 | MS.gene07666:CDS |
GAAATCCTCCTTATTAGTAT+GGG | 0.522042 | 4.1:+42457964 | MS.gene07666:CDS |
TCTCTTCAATAAGTGAAAAG+AGG | 0.524063 | 4.1:-42456902 | None:intergenic |
TCAAAACATAAAGACTGAGT+TGG | 0.528039 | 4.1:+42457832 | MS.gene07666:CDS |
TGTACACATGTGGGTTTCAA+AGG | 0.528762 | 4.1:+42456576 | MS.gene07666:CDS |
AAATTCAAATGTAATGAGAC+TGG | 0.528787 | 4.1:-42457801 | None:intergenic |
TGGTAATTGAAAATGAAGGT+TGG | 0.530535 | 4.1:-42456323 | None:intergenic |
GGAGGTTGGAAACTCTAGTT+GGG | 0.541818 | 4.1:+42457745 | MS.gene07666:CDS |
CATGTGTTCTATCCACAAGA+TGG | 0.542093 | 4.1:+42456278 | MS.gene07666:CDS |
TGAGTGACTTACAATATATC+GGG | 0.542691 | 4.1:-42457861 | None:intergenic |
TTCAAAGGCATTAGATCTCA+AGG | 0.542872 | 4.1:+42456591 | MS.gene07666:CDS |
AACACAGGGTCTGAAATCTC+TGG | 0.546811 | 4.1:-42456343 | None:intergenic |
TGTTATACAGTTTCTCAGCA+TGG | 0.547203 | 4.1:+42457259 | MS.gene07666:intron |
AGAGAAAGAACTTCAAGTGA+TGG | 0.549393 | 4.1:-42456985 | None:intergenic |
GATGGAGCATTAATTTGTAG+TGG | 0.549624 | 4.1:-42456967 | None:intergenic |
ACTTAAGGATCTTGTAATTG+CGG | 0.552763 | 4.1:+42457400 | MS.gene07666:CDS |
AAAAGAAGTTCCTCCAAATG+TGG | 0.558471 | 4.1:-42456850 | None:intergenic |
GGTGGAGCCATCGGTAACTC+CGG | 0.559098 | 4.1:+42457766 | MS.gene07666:CDS |
GGACAACACTTAACAGAAGT+AGG | 0.560485 | 4.1:-42456946 | None:intergenic |
TAGAATACCTCACAGTTTCA+CGG | 0.569419 | 4.1:-42456777 | None:intergenic |
AATGTCAAATCATTGGCTCT+CGG | 0.570170 | 4.1:+42457135 | MS.gene07666:CDS |
ATTCTTCTTTGGACAACACA+GGG | 0.576969 | 4.1:-42456357 | None:intergenic |
TGTACACACATGGGTTTCAA+AGG | 0.579762 | 4.1:+42456468 | MS.gene07666:CDS |
ATGTGTTCTATCCACAAGAT+GGG | 0.579779 | 4.1:+42456279 | MS.gene07666:CDS |
TTCCACGTGTGAGTCTCTTG+TGG | 0.581700 | 4.1:+42456672 | MS.gene07666:CDS |
TGAAAAGAAGAATTGAGTGT+TGG | 0.588267 | 4.1:-42456721 | None:intergenic |
GCTCGTCAGCTTTCTACAGA+AGG | 0.588452 | 4.1:+42457370 | MS.gene07666:CDS |
ACATGTGTACATCATTTGGC+TGG | 0.590853 | 4.1:-42456564 | None:intergenic |
AATTCCCGAAGAAAGGAGGT+TGG | 0.591474 | 4.1:+42457731 | MS.gene07666:CDS |
TCACTCAAGTAAGTTGGAGA+AGG | 0.592918 | 4.1:+42457877 | MS.gene07666:CDS |
AATTCTTCTTTGGACAACAC+AGG | 0.603608 | 4.1:-42456358 | None:intergenic |
TAATATCTGAGAATTGCAGT+TGG | 0.604749 | 4.1:+42457342 | MS.gene07666:CDS |
GCAGATTGACTCCCATCTTG+TGG | 0.609178 | 4.1:-42456290 | None:intergenic |
GCCAAATGATGTACACATGT+GGG | 0.612968 | 4.1:+42456567 | MS.gene07666:CDS |
AAAGAAGTTCCTCCAAATGT+GGG | 0.614497 | 4.1:-42456849 | None:intergenic |
TCTCTGGTAATTGAAAATGA+AGG | 0.617577 | 4.1:-42456327 | None:intergenic |
AATCAATTCCCGAAGAAAGG+AGG | 0.619715 | 4.1:+42457727 | MS.gene07666:CDS |
AGCCATATGATGTACACACA+TGG | 0.627872 | 4.1:+42456458 | MS.gene07666:CDS |
GGTTGGAAACTCTAGTTGGG+TGG | 0.633242 | 4.1:+42457748 | MS.gene07666:CDS |
TCACACGTGGAAAGCTTAAG+CGG | 0.638769 | 4.1:-42456661 | None:intergenic |
AGACATTCCGGAGTTACCGA+TGG | 0.639537 | 4.1:-42457773 | None:intergenic |
ATGTGTGTACATCATATGGC+TGG | 0.640299 | 4.1:-42456456 | None:intergenic |
CTTGTGGTCTTAAAATTGCG+GGG | 0.648431 | 4.1:+42456688 | MS.gene07666:CDS |
AAGTAGGCATATATAAACAA+AGG | 0.650404 | 4.1:-42456930 | None:intergenic |
AATTTGTATACAGTCATGAA+AGG | 0.652847 | 4.1:+42457105 | MS.gene07666:CDS |
AGGTATTCTATGTTTGATGA+CGG | 0.657979 | 4.1:+42456790 | MS.gene07666:CDS |
GCCATATGATGTACACACAT+GGG | 0.668026 | 4.1:+42456459 | MS.gene07666:CDS |
TCATACCCATACTAATAAGG+AGG | 0.669937 | 4.1:-42457969 | None:intergenic |
AGCCAAATGATGTACACATG+TGG | 0.670458 | 4.1:+42456566 | MS.gene07666:CDS |
TTCATCTCCGTGAAACTGTG+AGG | 0.674108 | 4.1:+42456770 | MS.gene07666:CDS |
AGATGAAGAGTCTTTAGTGA+CGG | 0.675315 | 4.1:-42456754 | None:intergenic |
TATACAGTTTCTCAGCATGG+AGG | 0.700394 | 4.1:+42457262 | MS.gene07666:intron |
GACCACAAGAGACTCACACG+TGG | 0.737727 | 4.1:-42456674 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAGTTAAAAAATTTAAG+AGG | - | chr4.1:42458182-42458201 | None:intergenic | 10.0% |
!!! | AAAATTCTAATGATAATTTT+TGG | + | chr4.1:42457682-42457701 | MS.gene07666:intron | 10.0% |
!! | AAATAAAATAGTTTGAAAGA+AGG | - | chr4.1:42457630-42457649 | None:intergenic | 15.0% |
!! | ATATTATACTATTACATTCA+TGG | + | chr4.1:42458115-42458134 | MS.gene07666:intron | 15.0% |
!!! | AATTAATCAATATTTGTTAC+AGG | + | chr4.1:42458251-42458270 | MS.gene07666:intron | 15.0% |
!!! | TCACAATTTATTATTTTTGT+GGG | + | chr4.1:42457316-42457335 | MS.gene07666:CDS | 15.0% |
!!! | TTCACAATTTATTATTTTTG+TGG | + | chr4.1:42457315-42457334 | MS.gene07666:CDS | 15.0% |
!! | ATGGAACTTGTAATTAAAAA+AGG | - | chr4.1:42457197-42457216 | None:intergenic | 20.0% |
!! | CTCATTACATTTGAATTTAT+TGG | + | chr4.1:42457806-42457825 | MS.gene07666:CDS | 20.0% |
!! | TAATTCAATTGAAGATCATA+TGG | + | chr4.1:42458278-42458297 | MS.gene07666:CDS | 20.0% |
!!! | TTTGTAAAGTCATATTTTCT+AGG | - | chr4.1:42457030-42457049 | None:intergenic | 20.0% |
! | AAATTCAAATGTAATGAGAC+TGG | - | chr4.1:42457804-42457823 | None:intergenic | 25.0% |
! | AAGTAGGCATATATAAACAA+AGG | - | chr4.1:42456933-42456952 | None:intergenic | 25.0% |
! | AATATAATAAGCTCAAAACC+TGG | + | chr4.1:42457474-42457493 | MS.gene07666:intron | 25.0% |
! | AATGAGAATAGAATTGCATA+TGG | - | chr4.1:42457230-42457249 | None:intergenic | 25.0% |
! | AATTTGTATACAGTCATGAA+AGG | + | chr4.1:42457105-42457124 | MS.gene07666:CDS | 25.0% |
! | ACTTTCTAATGTCAAATCAT+TGG | + | chr4.1:42457128-42457147 | MS.gene07666:CDS | 25.0% |
! | ATGAGAATAGAATTGCATAT+GGG | - | chr4.1:42457229-42457248 | None:intergenic | 25.0% |
! | GAGATATAAAGTTGAGTTTA+TGG | - | chr4.1:42458087-42458106 | None:intergenic | 25.0% |
! | TAAAGATTGGAATTCTTCTT+TGG | - | chr4.1:42456371-42456390 | None:intergenic | 25.0% |
! | TATAAAGTTGAGTTTATGGT+CGG | - | chr4.1:42458083-42458102 | None:intergenic | 25.0% |
! | TTGAGTGACTTACAATATAT+CGG | - | chr4.1:42457865-42457884 | None:intergenic | 25.0% |
!! | AATATCTAGAACAATAAGAG+AGG | - | chr4.1:42458056-42458075 | None:intergenic | 25.0% |
!! | ATTACAAGATCCTTAAGTTT+TGG | - | chr4.1:42457398-42457417 | None:intergenic | 25.0% |
!! | GATCTCAATAATTTTCTATC+TGG | + | chr4.1:42456823-42456842 | MS.gene07666:CDS | 25.0% |
!! | TATAACACTCTTTTGTTGAT+AGG | - | chr4.1:42456255-42456274 | None:intergenic | 25.0% |
!! | TTATATTTTCATTGCGTCTT+AGG | - | chr4.1:42456405-42456424 | None:intergenic | 25.0% |
ACTTAAGGATCTTGTAATTG+CGG | + | chr4.1:42457400-42457419 | MS.gene07666:CDS | 30.0% | |
AGAAATCCTCCTTATTAGTA+TGG | + | chr4.1:42457963-42457982 | MS.gene07666:CDS | 30.0% | |
AGGTATTCTATGTTTGATGA+CGG | + | chr4.1:42456790-42456809 | MS.gene07666:CDS | 30.0% | |
AGTAGAAAAAAGTTTACGCA+TGG | + | chr4.1:42457934-42457953 | MS.gene07666:CDS | 30.0% | |
CGGAAAATCTAAGAAAACTA+AGG | + | chr4.1:42456521-42456540 | MS.gene07666:CDS | 30.0% | |
GAAATCCTCCTTATTAGTAT+GGG | + | chr4.1:42457964-42457983 | MS.gene07666:CDS | 30.0% | |
GGTAATTGAAAATGAAGGTT+GGG | - | chr4.1:42456325-42456344 | None:intergenic | 30.0% | |
GTAGAAAAAAGTTTACGCAT+GGG | + | chr4.1:42457935-42457954 | MS.gene07666:CDS | 30.0% | |
TAATATCTGAGAATTGCAGT+TGG | + | chr4.1:42457342-42457361 | MS.gene07666:CDS | 30.0% | |
TAGAAAAAAGTTTACGCATG+GGG | + | chr4.1:42457936-42457955 | MS.gene07666:CDS | 30.0% | |
TCAAAACATAAAGACTGAGT+TGG | + | chr4.1:42457832-42457851 | MS.gene07666:CDS | 30.0% | |
TCTCTGGTAATTGAAAATGA+AGG | - | chr4.1:42456330-42456349 | None:intergenic | 30.0% | |
TCTCTTCAATAAGTGAAAAG+AGG | - | chr4.1:42456905-42456924 | None:intergenic | 30.0% | |
TGAAAAGAAGAATTGAGTGT+TGG | - | chr4.1:42456724-42456743 | None:intergenic | 30.0% | |
TGAAAGAAGGTTAAATTGCT+AGG | - | chr4.1:42457617-42457636 | None:intergenic | 30.0% | |
TGAGTGACTTACAATATATC+GGG | - | chr4.1:42457864-42457883 | None:intergenic | 30.0% | |
TGGTAATTGAAAATGAAGGT+TGG | - | chr4.1:42456326-42456345 | None:intergenic | 30.0% | |
!! | TACTCTTCTTTTCTTTGAAG+TGG | - | chr4.1:42457918-42457937 | None:intergenic | 30.0% |
!!! | ACTCTTCTTTTCTTTGAAGT+GGG | - | chr4.1:42457917-42457936 | None:intergenic | 30.0% |
!!! | CTGTTTTATTTGCAAACTCT+AGG | - | chr4.1:42457531-42457550 | None:intergenic | 30.0% |
AAAAGAAGTTCCTCCAAATG+TGG | - | chr4.1:42456853-42456872 | None:intergenic | 35.0% | |
AAAATGAAGGTTGGGAATCT+TGG | - | chr4.1:42456317-42456336 | None:intergenic | 35.0% | |
AAAGAAGTTCCTCCAAATGT+GGG | - | chr4.1:42456852-42456871 | None:intergenic | 35.0% | |
AATAGCAGCTTCATCAAGAT+TGG | - | chr4.1:42457058-42457077 | None:intergenic | 35.0% | |
AATTCTTCTTTGGACAACAC+AGG | - | chr4.1:42456361-42456380 | None:intergenic | 35.0% | |
ACGTCATACCCATACTAATA+AGG | - | chr4.1:42457975-42457994 | None:intergenic | 35.0% | |
AGAAAAAAGTTTACGCATGG+GGG | + | chr4.1:42457937-42457956 | MS.gene07666:CDS | 35.0% | |
AGAGAAAGAACTTCAAGTGA+TGG | - | chr4.1:42456988-42457007 | None:intergenic | 35.0% | |
AGATCATATGGATGTCTTCA+AGG | + | chr4.1:42458290-42458309 | MS.gene07666:CDS | 35.0% | |
AGATGAAGAGTCTTTAGTGA+CGG | - | chr4.1:42456757-42456776 | None:intergenic | 35.0% | |
ATGTCTTCAAGGATTCAATC+AGG | + | chr4.1:42458301-42458320 | MS.gene07666:CDS | 35.0% | |
ATGTGTTCTATCCACAAGAT+GGG | + | chr4.1:42456279-42456298 | MS.gene07666:CDS | 35.0% | |
ATTCTTCTTTGGACAACACA+GGG | - | chr4.1:42456360-42456379 | None:intergenic | 35.0% | |
GGACAGCAAGATTTAAAGAT+TGG | - | chr4.1:42456384-42456403 | None:intergenic | 35.0% | |
TAGAATACCTCACAGTTTCA+CGG | - | chr4.1:42456780-42456799 | None:intergenic | 35.0% | |
TCATACCCATACTAATAAGG+AGG | - | chr4.1:42457972-42457991 | None:intergenic | 35.0% | |
TGAAATCAATTCCCGAAGAA+AGG | + | chr4.1:42457724-42457743 | MS.gene07666:CDS | 35.0% | |
TGCATATGGGTGACTAAATA+TGG | - | chr4.1:42457216-42457235 | None:intergenic | 35.0% | |
TGTAAGTCACTCAAGTAAGT+TGG | + | chr4.1:42457871-42457890 | MS.gene07666:CDS | 35.0% | |
TGTTATACAGTTTCTCAGCA+TGG | + | chr4.1:42457259-42457278 | MS.gene07666:intron | 35.0% | |
! | AACTCTAGGTATCTTTTGCT+AGG | - | chr4.1:42457517-42457536 | None:intergenic | 35.0% |
! | CTCTTGTGGTCTTAAAATTG+CGG | + | chr4.1:42456686-42456705 | MS.gene07666:CDS | 35.0% |
! | TATTTTCGTTAGTAAGCGTG+TGG | + | chr4.1:42457074-42457093 | MS.gene07666:CDS | 35.0% |
! | TCTTGTGGTCTTAAAATTGC+GGG | + | chr4.1:42456687-42456706 | MS.gene07666:CDS | 35.0% |
!! | AAGTGAAAAGAGGTGTTGAT+AGG | - | chr4.1:42456895-42456914 | None:intergenic | 35.0% |
!! | AATGTCAAATCATTGGCTCT+CGG | + | chr4.1:42457135-42457154 | MS.gene07666:CDS | 35.0% |
!! | CTAATGCTTGATAGTGAGAA+AGG | + | chr4.1:42456430-42456449 | MS.gene07666:CDS | 35.0% |
!! | GATGGAGCATTAATTTGTAG+TGG | - | chr4.1:42456970-42456989 | None:intergenic | 35.0% |
!! | TTCAAAGGCATTAGATCTCA+AGG | + | chr4.1:42456591-42456610 | MS.gene07666:CDS | 35.0% |
!!! | GCGGCAATAAGATTTTTTCA+TGG | - | chr4.1:42456645-42456664 | None:intergenic | 35.0% |
AATCAATTCCCGAAGAAAGG+AGG | + | chr4.1:42457727-42457746 | MS.gene07666:CDS | 40.0% | |
ACAGAAGGCTCCAAAACTTA+AGG | + | chr4.1:42457385-42457404 | MS.gene07666:CDS | 40.0% | |
ACATGTGTACATCATTTGGC+TGG | - | chr4.1:42456567-42456586 | None:intergenic | 40.0% | |
ACCCACATGTGTACATCATT+TGG | - | chr4.1:42456571-42456590 | None:intergenic | 40.0% | |
ACCCATGTGTGTACATCATA+TGG | - | chr4.1:42456463-42456482 | None:intergenic | 40.0% | |
AGCCAAATGATGTACACATG+TGG | + | chr4.1:42456566-42456585 | MS.gene07666:CDS | 40.0% | |
AGCCATATGATGTACACACA+TGG | + | chr4.1:42456458-42456477 | MS.gene07666:CDS | 40.0% | |
AGTTTCCAACCTCCTTTCTT+CGG | - | chr4.1:42457739-42457758 | None:intergenic | 40.0% | |
ATGTGTGTACATCATATGGC+TGG | - | chr4.1:42456459-42456478 | None:intergenic | 40.0% | |
CATGTGTTCTATCCACAAGA+TGG | + | chr4.1:42456278-42456297 | MS.gene07666:CDS | 40.0% | |
GCCAAATGATGTACACATGT+GGG | + | chr4.1:42456567-42456586 | MS.gene07666:CDS | 40.0% | |
GCCATATGATGTACACACAT+GGG | + | chr4.1:42456459-42456478 | MS.gene07666:CDS | 40.0% | |
GGACAACACTTAACAGAAGT+AGG | - | chr4.1:42456949-42456968 | None:intergenic | 40.0% | |
TATACAGTTTCTCAGCATGG+AGG | + | chr4.1:42457262-42457281 | MS.gene07666:intron | 40.0% | |
TGTACACACATGGGTTTCAA+AGG | + | chr4.1:42456468-42456487 | MS.gene07666:CDS | 40.0% | |
TGTACACATGTGGGTTTCAA+AGG | + | chr4.1:42456576-42456595 | MS.gene07666:CDS | 40.0% | |
! | AGACTGGTTGTAAGACATTC+CGG | - | chr4.1:42457788-42457807 | None:intergenic | 40.0% |
! | CTTGTGGTCTTAAAATTGCG+GGG | + | chr4.1:42456688-42456707 | MS.gene07666:CDS | 40.0% |
! | TCACTCAAGTAAGTTGGAGA+AGG | + | chr4.1:42457877-42457896 | MS.gene07666:CDS | 40.0% |
! | TTAGATTTTCCGTGCGTCTT+AGG | - | chr4.1:42456513-42456532 | None:intergenic | 40.0% |
!! | TTTTGTTGTCCTAAGACGCA+CGG | + | chr4.1:42456501-42456520 | MS.gene07666:CDS | 40.0% |
AATTCCCGAAGAAAGGAGGT+TGG | + | chr4.1:42457731-42457750 | MS.gene07666:CDS | 45.0% | |
ACAGATCCAAGTCAAGTTCC+TGG | - | chr4.1:42456618-42456637 | None:intergenic | 45.0% | |
AGGAGGTTGGAAACTCTAGT+TGG | + | chr4.1:42457744-42457763 | MS.gene07666:CDS | 45.0% | |
GGAGGTTGGAAACTCTAGTT+GGG | + | chr4.1:42457745-42457764 | MS.gene07666:CDS | 45.0% | |
GTCTTTACTCTTCTTGTGCC+AGG | - | chr4.1:42457495-42457514 | None:intergenic | 45.0% | |
GTTTCCAACCTCCTTTCTTC+GGG | - | chr4.1:42457738-42457757 | None:intergenic | 45.0% | |
TCACACGTGGAAAGCTTAAG+CGG | - | chr4.1:42456664-42456683 | None:intergenic | 45.0% | |
TCTATCTGGTTGCCCACATT+TGG | + | chr4.1:42456837-42456856 | MS.gene07666:CDS | 45.0% | |
TTCATCTCCGTGAAACTGTG+AGG | + | chr4.1:42456770-42456789 | MS.gene07666:CDS | 45.0% | |
! | AACACAGGGTCTGAAATCTC+TGG | - | chr4.1:42456346-42456365 | None:intergenic | 45.0% |
!!! | ACTTTTTTAATTTTTTTTAT+CGG | + | chr4.1:42458195-42458214 | MS.gene07666:intron | 5.0% |
AGACATTCCGGAGTTACCGA+TGG | - | chr4.1:42457776-42457795 | None:intergenic | 50.0% | |
ATCTGGTTGCCCACATTTGG+AGG | + | chr4.1:42456840-42456859 | MS.gene07666:CDS | 50.0% | |
CAAGGTCCAGGAACTTGACT+TGG | + | chr4.1:42456609-42456628 | MS.gene07666:CDS | 50.0% | |
GCTCGTCAGCTTTCTACAGA+AGG | + | chr4.1:42457370-42457389 | MS.gene07666:CDS | 50.0% | |
GGCATTAGATCTCAAGGTCC+AGG | + | chr4.1:42456597-42456616 | MS.gene07666:CDS | 50.0% | |
GGTTGGAAACTCTAGTTGGG+TGG | + | chr4.1:42457748-42457767 | MS.gene07666:CDS | 50.0% | |
TTCCACGTGTGAGTCTCTTG+TGG | + | chr4.1:42456672-42456691 | MS.gene07666:CDS | 50.0% | |
! | GCAGATTGACTCCCATCTTG+TGG | - | chr4.1:42456293-42456312 | None:intergenic | 50.0% |
CTAAGGCTCGAGAGCGAGAA+AGG | + | chr4.1:42456538-42456557 | MS.gene07666:CDS | 55.0% | |
CTCTAGTTGGGTGGAGCCAT+CGG | + | chr4.1:42457757-42457776 | MS.gene07666:CDS | 55.0% | |
GACCACAAGAGACTCACACG+TGG | - | chr4.1:42456677-42456696 | None:intergenic | 55.0% | |
GGTGGAGCCATCGGTAACTC+CGG | + | chr4.1:42457766-42457785 | MS.gene07666:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 42456178 | 42458341 | 42456178 | ID=MS.gene07666 |
chr4.1 | mRNA | 42456178 | 42458341 | 42456178 | ID=MS.gene07666.t1;Parent=MS.gene07666 |
chr4.1 | exon | 42456178 | 42457173 | 42456178 | ID=MS.gene07666.t1.exon1;Parent=MS.gene07666.t1 |
chr4.1 | CDS | 42456178 | 42457173 | 42456178 | ID=cds.MS.gene07666.t1;Parent=MS.gene07666.t1 |
chr4.1 | exon | 42457269 | 42457421 | 42457269 | ID=MS.gene07666.t1.exon2;Parent=MS.gene07666.t1 |
chr4.1 | CDS | 42457269 | 42457421 | 42457269 | ID=cds.MS.gene07666.t1;Parent=MS.gene07666.t1 |
chr4.1 | exon | 42457716 | 42457985 | 42457716 | ID=MS.gene07666.t1.exon3;Parent=MS.gene07666.t1 |
chr4.1 | CDS | 42457716 | 42457985 | 42457716 | ID=cds.MS.gene07666.t1;Parent=MS.gene07666.t1 |
chr4.1 | exon | 42458273 | 42458341 | 42458273 | ID=MS.gene07666.t1.exon4;Parent=MS.gene07666.t1 |
chr4.1 | CDS | 42458273 | 42458341 | 42458273 | ID=cds.MS.gene07666.t1;Parent=MS.gene07666.t1 |
Gene Sequence |
Protein sequence |