AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene03760


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03760.t1 MTR_4g056020 90.414 459 44 0 1 459 1 459 0.0 845
MS.gene03760.t1 MTR_4g055990 80.838 501 54 3 1 459 1 501 0.0 780
MS.gene03760.t1 MTR_4g056030 85.011 447 67 0 1 447 1 447 0.0 764
MS.gene03760.t1 MTR_4g055580 79.268 492 64 3 1 455 92 582 0.0 749
MS.gene03760.t1 MTR_4g055990 79.310 493 57 5 1 451 1 490 0.0 744
MS.gene03760.t1 MTR_4g056040 77.302 467 76 1 1 437 1 467 0.0 717
MS.gene03760.t1 MTR_4g056070 75.973 437 65 1 1 397 1 437 0.0 654
MS.gene03760.t1 MTR_1g038710 67.857 448 136 3 1 442 11 456 0.0 578
MS.gene03760.t1 MTR_1g090883 63.456 353 125 3 2 352 12 362 9.26e-146 421
MS.gene03760.t1 MTR_7g110920 53.911 358 108 5 99 437 1 320 8.03e-117 345
MS.gene03760.t1 MTR_4g056020 88.957 163 18 0 297 459 1 163 6.91e-100 296
MS.gene03760.t1 MTR_4g093690 56.250 272 110 6 1 268 10 276 1.77e-85 263
MS.gene03760.t1 MTR_1g090900 66.102 177 57 2 1 174 1 177 6.53e-68 216
MS.gene03760.t1 MTR_4g056010 88.889 99 11 0 69 167 2 100 3.20e-55 179
MS.gene03760.t1 MTR_5g084070 31.517 422 248 16 5 416 9 399 1.40e-34 134
MS.gene03760.t1 MTR_5g080710 31.280 422 239 17 9 412 33 421 5.16e-31 124
MS.gene03760.t1 MTR_4g032730 30.243 453 235 21 9 411 15 436 2.05e-29 120
MS.gene03760.t1 MTR_1g090890 61.538 91 29 2 350 437 29 116 1.07e-28 109
MS.gene03760.t1 MTR_8g467800 32.374 417 241 15 5 400 16 412 7.63e-28 115
MS.gene03760.t1 MTR_8g062270 30.047 426 258 16 9 411 16 424 3.06e-27 114
MS.gene03760.t1 MTR_8g445780 28.922 408 239 13 9 396 13 389 7.52e-26 108
MS.gene03760.t1 MTR_1g041245 28.502 414 215 16 9 411 11 354 1.91e-25 107
MS.gene03760.t1 MTR_8g058970 28.118 473 277 16 4 434 14 465 3.08e-25 108
MS.gene03760.t1 MTR_3g108560 30.365 438 213 19 6 429 17 376 1.92e-24 105
MS.gene03760.t1 MTR_8g014260 28.539 438 253 16 6 413 13 420 3.53e-24 105
MS.gene03760.t1 MTR_0492s0020 28.780 410 213 19 9 414 86 420 4.92e-24 104
MS.gene03760.t1 MTR_7g056433 28.029 421 227 16 4 415 7 360 6.79e-24 103
MS.gene03760.t1 MTR_0543s0010 28.780 410 213 19 9 414 86 420 7.04e-24 103
MS.gene03760.t1 MTR_8g468810 28.508 449 272 18 4 426 20 445 9.76e-24 103
MS.gene03760.t1 MTR_7g115270 26.697 442 242 16 9 433 12 388 1.90e-23 102
MS.gene03760.t1 MTR_5g008950 26.265 415 217 13 11 414 1 337 5.10e-23 100
MS.gene03760.t1 MTR_2g083840 29.864 442 260 19 9 425 21 437 1.37e-22 100
MS.gene03760.t1 MTR_7g007340 27.152 453 228 15 4 448 8 366 5.93e-22 97.4
MS.gene03760.t1 MTR_3g107100 27.470 415 228 14 5 411 7 356 9.78e-22 97.4
MS.gene03760.t1 MTR_8g468840 28.103 427 265 15 8 411 13 420 2.00e-21 96.7
MS.gene03760.t1 MTR_7g098570 27.139 409 224 13 9 411 20 360 8.14e-21 95.1
MS.gene03760.t1 MTR_2g007450 24.379 443 249 13 1 413 8 394 1.30e-20 94.0
MS.gene03760.t1 MTR_7g007080 27.273 451 237 19 7 438 2 380 1.69e-20 93.6
MS.gene03760.t1 MTR_8g467800 33.987 306 172 10 5 294 16 307 2.48e-20 92.4
MS.gene03760.t1 MTR_1g053025 25.792 442 252 17 9 434 2 383 4.68e-20 92.0
MS.gene03760.t1 MTR_6g045333 26.329 414 233 14 9 411 61 413 5.78e-20 92.4
MS.gene03760.t1 MTR_3g036250 24.775 444 232 13 6 433 2 359 2.95e-19 89.4
MS.gene03760.t1 MTR_2g007400 26.190 462 241 21 9 440 12 403 4.88e-19 89.4
MS.gene03760.t1 MTR_7g026500 24.654 434 233 15 8 420 13 373 1.18e-18 88.2
MS.gene03760.t1 MTR_8g468810 30.968 310 171 14 4 290 20 309 1.25e-18 87.0
MS.gene03760.t1 MTR_8g468810 30.968 310 171 14 4 290 20 309 1.60e-18 86.7
MS.gene03760.t1 MTR_8g468810 30.968 310 171 14 4 290 20 309 2.03e-18 86.7
MS.gene03760.t1 MTR_7g033990 23.077 416 232 15 9 411 11 351 3.72e-18 86.7
MS.gene03760.t1 MTR_8g468810 30.968 310 171 14 4 290 20 309 4.20e-18 86.3
MS.gene03760.t1 MTR_3g107120 27.152 453 243 15 1 434 1 385 6.21e-18 85.9
MS.gene03760.t1 MTR_8g014160 28.770 431 211 18 4 411 36 393 9.30e-18 85.5
MS.gene03760.t1 MTR_3g108150 27.356 435 241 16 8 433 12 380 1.07e-17 85.1
MS.gene03760.t1 MTR_3g109982 25.615 488 302 15 4 446 8 479 2.98e-17 85.1
MS.gene03760.t1 MTR_3g082890 26.478 423 232 16 6 411 94 454 3.28e-17 84.3
MS.gene03760.t1 MTR_1g013560 25.761 427 263 13 5 411 15 407 5.93e-17 83.2
MS.gene03760.t1 MTR_5g007410 24.638 414 233 16 11 411 28 375 7.84e-17 82.8
MS.gene03760.t1 MTR_7g034115 35.789 190 108 7 9 193 11 191 2.56e-16 80.9
MS.gene03760.t1 MTR_8g062310 33.175 211 120 9 9 213 25 220 3.36e-16 80.9
MS.gene03760.t1 MTR_7g060470 25.117 426 251 14 9 423 3 371 4.35e-16 80.1
MS.gene03760.t1 MTR_3g107160 23.820 445 253 16 4 434 5 377 7.12e-16 79.7
MS.gene03760.t1 MTR_4g039440 25.547 411 230 18 9 411 34 376 1.08e-15 79.3
MS.gene03760.t1 MTR_7g088260 24.944 445 245 16 4 433 86 456 1.11e-15 79.3
MS.gene03760.t1 MTR_2g008320 25.172 437 249 18 9 434 52 421 1.16e-15 79.3
MS.gene03760.t1 MTR_3g048290 24.831 443 292 13 5 423 19 444 2.59e-15 78.6
MS.gene03760.t1 MTR_5g039950 27.553 421 241 17 4 411 18 387 2.94e-15 77.8
MS.gene03760.t1 MTR_8g085430 32.178 202 106 7 9 193 11 198 3.12e-15 77.0
MS.gene03760.t1 MTR_6g011460 24.823 423 235 15 9 421 46 395 3.73e-15 77.8
MS.gene03760.t1 MTR_7g032380 32.292 192 112 7 9 193 11 191 4.73e-15 76.6
MS.gene03760.t1 MTR_5g092960 25.991 454 269 18 5 419 15 440 5.29e-15 77.4
MS.gene03760.t1 MTR_2g008310 24.757 412 233 15 9 412 2 344 5.88e-15 76.6
MS.gene03760.t1 MTR_7g056447 34.742 213 122 9 1 206 1 203 8.15e-15 75.1
MS.gene03760.t1 MTR_3g023630 24.755 408 232 15 9 411 8 345 8.69e-15 76.3
MS.gene03760.t1 MTR_2g036470 25.799 438 233 19 9 426 14 379 9.56e-15 76.3
MS.gene03760.t1 MTR_7g033945 34.884 172 88 7 9 165 11 173 9.68e-15 72.8
MS.gene03760.t1 MTR_8g469020 27.578 446 256 21 9 416 7 423 1.26e-14 76.3
MS.gene03760.t1 MTR_7g034110 31.579 190 118 6 9 193 11 193 1.26e-14 75.5
MS.gene03760.t1 MTR_1g014450 24.439 446 243 17 4 411 11 400 1.44e-14 75.9
MS.gene03760.t1 MTR_2g005990 30.583 206 115 7 9 195 6 202 1.55e-14 75.5
MS.gene03760.t1 MTR_2g007500 34.574 188 104 6 9 193 14 185 1.81e-14 74.7
MS.gene03760.t1 MTR_3g108560 31.161 353 157 16 6 346 17 295 2.26e-14 74.3
MS.gene03760.t1 MTR_4g080787 25.758 462 268 20 6 423 13 443 2.56e-14 75.5
MS.gene03760.t1 MTR_7g033915 31.746 189 102 7 9 193 11 176 2.69e-14 74.7
MS.gene03760.t1 MTR_7g098480 26.077 418 219 13 7 411 16 356 2.69e-14 75.1
MS.gene03760.t1 MTR_1g108820 25.000 412 233 14 9 411 8 352 2.70e-14 74.7
MS.gene03760.t1 MTR_4g080773 27.152 453 276 19 6 423 13 446 3.02e-14 75.1
MS.gene03760.t1 MTR_5g045510 33.679 193 107 8 9 193 12 191 3.54e-14 74.3
MS.gene03760.t1 MTR_4g080773 27.152 453 276 19 6 423 13 446 3.65e-14 74.7
MS.gene03760.t1 MTR_5g058100 25.400 437 240 18 9 433 9 371 4.57e-14 73.9
MS.gene03760.t1 MTR_6g022360 31.795 195 109 6 3 193 37 211 8.48e-14 73.2
MS.gene03760.t1 MTR_1g066830 23.821 424 248 17 9 423 8 365 9.51e-14 73.2
MS.gene03760.t1 MTR_1g013560 32.512 203 116 5 5 195 15 208 1.01e-13 72.8
MS.gene03760.t1 MTR_2g091145 26.712 438 244 18 5 411 17 408 1.40e-13 72.8
MS.gene03760.t1 MTR_7g098510 33.505 194 110 6 7 193 16 197 1.74e-13 72.4
MS.gene03760.t1 MTR_3g087260 28.194 454 248 21 7 416 10 429 3.73e-13 71.6
MS.gene03760.t1 MTR_2g047848 25.581 430 258 19 4 409 2 393 3.87e-13 71.2
MS.gene03760.t1 MTR_5g073420 30.256 195 116 5 9 193 11 195 9.14e-13 70.1
MS.gene03760.t1 MTR_8g062010 32.178 202 115 7 1 191 1 191 1.26e-12 69.7
MS.gene03760.t1 MTR_0009s0080 24.466 421 233 18 7 411 16 367 1.94e-12 69.3
MS.gene03760.t1 MTR_3g082890 24.454 458 234 16 6 411 14 411 2.41e-12 68.9
MS.gene03760.t1 MTR_1g115245 31.977 172 99 4 4 163 21 186 2.45e-12 68.2
MS.gene03760.t1 MTR_5g040850 24.236 458 277 16 4 435 2 415 2.45e-12 68.9
MS.gene03760.t1 MTR_7g075820 25.439 456 235 19 9 433 6 387 2.84e-12 68.6
MS.gene03760.t1 MTR_1g085120 32.653 196 107 9 9 193 179 360 4.04e-12 68.6
MS.gene03760.t1 MTR_4g080590 24.444 450 285 18 9 429 23 446 4.22e-12 68.2
MS.gene03760.t1 MTR_8g070950 31.633 196 116 5 6 193 12 197 4.52e-12 68.2
MS.gene03760.t1 MTR_1g085120 32.653 196 107 9 9 193 167 348 4.74e-12 68.6
MS.gene03760.t1 MTR_4g047950 27.224 371 208 16 5 340 9 352 6.07e-12 67.4
MS.gene03760.t1 MTR_1g085120 32.653 196 107 9 9 193 92 273 8.95e-12 67.4
MS.gene03760.t1 MTR_3g071850 32.474 194 113 7 9 193 24 208 1.17e-11 67.4
MS.gene03760.t1 MTR_1g013840 26.056 426 254 16 9 411 56 443 1.47e-11 66.6
MS.gene03760.t1 MTR_7g055943 25.296 423 234 17 3 411 34 388 2.29e-11 65.9
MS.gene03760.t1 MTR_4g050930 30.978 184 116 5 7 183 27 206 2.64e-11 65.5
MS.gene03760.t1 MTR_1g108820 31.313 198 120 7 9 202 8 193 3.02e-11 65.1
MS.gene03760.t1 MTR_1g021825 24.183 459 280 14 4 438 12 426 3.37e-11 65.5
MS.gene03760.t1 MTR_1g013630 33.200 250 131 12 5 229 35 273 4.16e-11 64.7
MS.gene03760.t1 MTR_1g021825 24.183 459 280 14 4 438 83 497 4.32e-11 65.1
MS.gene03760.t1 MTR_4g050930 30.978 184 116 5 7 183 27 206 4.55e-11 65.1
MS.gene03760.t1 MTR_3g023270 31.720 186 109 7 5 183 8 182 6.46e-11 63.9
MS.gene03760.t1 MTR_2g047858 26.179 424 256 17 9 411 115 502 6.53e-11 64.7
MS.gene03760.t1 MTR_2g082800 32.794 247 121 11 4 241 22 232 7.99e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03760.t1 AT4G00315 29.688 448 253 19 9 422 2 421 3.01e-32 128
MS.gene03760.t1 AT1G55660 28.668 443 264 18 9 422 53 472 4.19e-31 125
MS.gene03760.t1 AT4G10400 28.111 434 270 12 9 433 2 402 8.07e-30 120
MS.gene03760.t1 AT4G10400 28.111 434 270 12 9 433 2 402 8.07e-30 120
MS.gene03760.t1 AT4G10400 28.111 434 270 12 9 433 2 402 8.07e-30 120
MS.gene03760.t1 AT4G14103 30.667 375 215 12 9 356 8 364 3.23e-29 118
MS.gene03760.t1 AT4G14103 30.667 375 215 12 9 356 8 364 3.23e-29 118
MS.gene03760.t1 AT4G14103 31.536 371 208 13 9 352 8 359 8.29e-29 118
MS.gene03760.t1 AT4G26340 27.818 417 254 14 9 410 2 386 1.32e-28 117
MS.gene03760.t1 AT2G26860 30.193 414 259 13 9 411 2 396 1.85e-28 116
MS.gene03760.t1 AT2G26860 30.193 414 259 13 9 411 2 396 1.85e-28 116
MS.gene03760.t1 AT3G50710 28.372 430 252 16 9 416 2 397 2.26e-27 114
MS.gene03760.t1 AT5G56380 26.351 444 277 13 9 427 2 420 5.21e-27 113
MS.gene03760.t1 AT5G56380 26.351 444 277 13 9 427 2 420 5.21e-27 113
MS.gene03760.t1 AT1G51370 30.184 434 246 15 7 420 17 413 7.92e-27 112
MS.gene03760.t1 AT3G59190 30.707 368 211 13 9 344 12 367 6.33e-26 109
MS.gene03760.t1 AT3G59190 30.707 368 211 13 9 344 12 367 1.33e-25 109
MS.gene03760.t1 AT5G62970 28.995 438 253 18 9 411 2 416 5.66e-25 107
MS.gene03760.t1 AT4G14096 30.303 363 203 15 8 344 7 345 6.84e-25 107
MS.gene03760.t1 AT4G14096 30.303 363 203 15 8 344 7 345 6.84e-25 107
MS.gene03760.t1 AT5G38590 27.778 432 265 15 9 425 2 401 7.39e-25 106
MS.gene03760.t1 AT3G59230 28.009 457 259 15 9 416 12 447 4.48e-24 105
MS.gene03760.t1 AT4G22280 30.649 447 247 19 9 433 2 407 6.58e-24 103
MS.gene03760.t1 AT4G26350 25.517 435 261 15 9 416 2 400 1.34e-23 103
MS.gene03760.t1 AT1G55660 31.148 305 172 13 9 290 53 342 1.36e-23 102
MS.gene03760.t1 AT3G59160 27.027 407 228 12 9 360 13 405 1.50e-23 103
MS.gene03760.t1 AT4G22280 33.053 357 192 16 9 346 2 330 2.10e-23 100
MS.gene03760.t1 AT3G59210 30.469 384 217 14 5 356 3 368 4.96e-23 102
MS.gene03760.t1 AT3G59210 30.469 384 217 14 5 356 3 368 4.96e-23 102
MS.gene03760.t1 AT3G59210 30.469 384 217 14 5 356 3 368 4.96e-23 102
MS.gene03760.t1 AT3G59210 30.469 384 217 14 5 356 3 368 4.96e-23 102
MS.gene03760.t1 AT3G59210 30.469 384 217 14 5 356 3 368 4.96e-23 102
MS.gene03760.t1 AT5G56400 28.741 421 249 17 9 411 33 420 5.29e-23 101
MS.gene03760.t1 AT4G13965 27.083 432 240 17 9 413 10 393 2.54e-22 99.4
MS.gene03760.t1 AT5G38396 29.301 372 213 12 9 346 2 357 3.09e-22 99.4
MS.gene03760.t1 AT1G51370 30.730 397 219 14 7 384 17 376 4.27e-22 98.6
MS.gene03760.t1 AT3G56780 27.016 496 266 19 11 439 9 475 5.16e-22 99.0
MS.gene03760.t1 AT3G59200 26.915 483 274 21 8 436 6 463 1.64e-21 97.4
MS.gene03760.t1 AT4G00320 27.778 378 225 11 3 345 7 371 1.67e-21 97.4
MS.gene03760.t1 AT5G41830 27.273 451 261 14 3 416 7 427 1.68e-21 97.4
MS.gene03760.t1 AT5G41840 29.124 388 208 13 9 346 14 384 1.80e-21 97.4
MS.gene03760.t1 AT1G32375 27.088 443 258 18 9 427 2 403 4.08e-21 95.5
MS.gene03760.t1 AT1G32375 27.088 443 258 18 9 427 2 403 4.08e-21 95.5
MS.gene03760.t1 AT5G53840 28.774 424 250 17 7 411 16 406 4.22e-21 95.9
MS.gene03760.t1 AT5G56440 25.708 424 266 10 9 411 2 397 5.74e-21 95.5
MS.gene03760.t1 AT4G00160 27.907 430 266 15 9 423 16 416 7.12e-21 95.1
MS.gene03760.t1 AT5G56370 27.804 428 273 15 9 430 2 399 7.15e-21 95.1
MS.gene03760.t1 AT5G56370 27.804 428 273 15 9 430 2 399 7.15e-21 95.1
MS.gene03760.t1 AT3G03030 28.000 375 219 10 9 346 2 362 1.05e-20 94.7
MS.gene03760.t1 AT3G03040 28.108 370 216 8 9 344 2 355 1.22e-20 94.7
MS.gene03760.t1 AT2G04230 25.910 467 287 16 8 448 12 445 1.80e-20 94.0
MS.gene03760.t1 AT5G53635 27.674 430 254 20 11 411 2 403 2.83e-20 93.2
MS.gene03760.t1 AT3G59170 28.753 393 212 12 9 345 7 387 2.95e-20 93.6
MS.gene03760.t1 AT3G58880 28.767 365 217 12 9 346 3 351 3.50e-20 93.2
MS.gene03760.t1 AT5G60610 28.571 413 257 16 9 411 2 386 5.80e-20 92.0
MS.gene03760.t1 AT5G60610 28.571 413 257 16 9 411 2 386 5.80e-20 92.0
MS.gene03760.t1 AT3G58920 27.179 390 224 12 9 355 2 374 6.44e-20 92.4
MS.gene03760.t1 AT1G58310 28.346 381 216 11 9 345 8 375 7.67e-20 92.4
MS.gene03760.t1 AT3G52680 26.773 437 260 15 9 423 21 419 7.86e-20 92.0
MS.gene03760.t1 AT5G38570 25.740 439 241 15 9 433 2 369 8.27e-20 91.3
MS.gene03760.t1 AT5G22670 28.636 440 260 18 8 423 10 419 1.07e-19 91.7
MS.gene03760.t1 AT3G59200 29.134 381 205 17 8 346 6 363 1.19e-19 90.5
MS.gene03760.t1 AT3G49030 27.027 444 275 16 7 434 19 429 1.44e-19 91.3
MS.gene03760.t1 AT3G58860 27.933 358 223 11 6 346 4 343 2.33e-19 90.9
MS.gene03760.t1 AT1G51370 36.548 197 103 7 7 198 17 196 2.72e-19 89.4
MS.gene03760.t1 AT3G26930 27.885 416 254 15 8 409 20 403 3.05e-19 90.5
MS.gene03760.t1 AT3G62440 29.873 395 214 19 9 361 2 375 5.36e-19 89.7
MS.gene03760.t1 AT5G56420 27.053 414 263 17 8 411 5 389 5.83e-19 89.4
MS.gene03760.t1 AT5G56420 27.053 414 263 17 8 411 5 389 5.83e-19 89.4
MS.gene03760.t1 AT5G56420 27.053 414 263 17 8 411 5 389 5.83e-19 89.4
MS.gene03760.t1 AT5G44950 27.635 427 260 18 9 411 4 405 9.06e-19 89.0
MS.gene03760.t1 AT2G42720 30.623 369 199 17 9 345 2 345 1.87e-18 87.8
MS.gene03760.t1 AT3G03030 28.923 325 184 9 9 296 2 316 2.10e-18 86.7
MS.gene03760.t1 AT3G58960 26.419 458 263 17 9 413 2 438 2.10e-18 87.8
MS.gene03760.t1 AT3G58900 28.814 413 244 12 9 385 2 400 4.90e-18 86.7
MS.gene03760.t1 AT3G59240 28.134 359 223 11 9 346 8 352 9.96e-18 85.9
MS.gene03760.t1 AT4G15060 27.123 365 216 13 6 346 23 361 9.97e-18 85.5
MS.gene03760.t1 AT5G44490 26.608 451 265 18 4 420 12 430 1.15e-17 85.5
MS.gene03760.t1 AT4G13960 28.108 370 213 11 9 346 2 350 1.21e-17 85.5
MS.gene03760.t1 AT4G13960 28.108 370 213 11 9 346 2 350 1.21e-17 85.5
MS.gene03760.t1 AT3G26930 27.132 387 236 15 36 408 3 357 1.53e-17 84.7
MS.gene03760.t1 AT5G44490 26.608 451 265 18 4 420 12 430 1.70e-17 85.1
MS.gene03760.t1 AT2G42730 28.009 432 264 17 9 411 5 418 1.88e-17 84.7
MS.gene03760.t1 AT3G62430 30.226 354 217 15 9 346 2 341 2.38e-17 84.3
MS.gene03760.t1 AT1G69630 27.733 375 217 15 2 346 11 361 2.75e-17 84.3
MS.gene03760.t1 AT4G10420 28.161 348 204 14 99 433 1 315 3.53e-17 82.8
MS.gene03760.t1 AT5G18770 26.824 466 284 18 9 442 24 464 4.62e-17 84.0
MS.gene03760.t1 AT1G78760 26.984 441 259 21 7 419 14 419 4.97e-17 83.6
MS.gene03760.t1 AT5G22700 27.790 439 242 19 7 408 41 441 6.01e-17 83.6
MS.gene03760.t1 AT1G66300 25.745 470 275 19 3 433 15 449 6.12e-17 83.2
MS.gene03760.t1 AT5G22700 27.790 439 242 19 7 408 4 404 6.48e-17 83.2
MS.gene03760.t1 AT5G22700 27.790 439 242 19 7 408 4 404 6.48e-17 83.2
MS.gene03760.t1 AT5G22700 27.790 439 242 19 7 408 4 404 6.48e-17 83.2
MS.gene03760.t1 AT5G22700 27.790 439 242 19 7 408 4 404 6.48e-17 83.2
MS.gene03760.t1 AT3G59250 25.701 428 253 15 9 415 7 390 6.78e-17 83.2
MS.gene03760.t1 AT2G26030 26.744 430 264 18 9 409 4 411 7.64e-17 82.8
MS.gene03760.t1 AT3G56780 26.959 434 229 17 11 385 9 413 8.47e-17 82.8
MS.gene03760.t1 AT4G09920 28.912 294 188 9 9 295 2 281 1.38e-16 80.9
MS.gene03760.t1 AT4G09920 28.912 294 188 9 9 295 2 281 1.38e-16 80.9
MS.gene03760.t1 AT4G15060 27.711 332 193 12 9 312 172 484 1.45e-16 82.4
MS.gene03760.t1 AT2G26030 26.932 427 262 18 9 409 4 406 1.47e-16 82.0
MS.gene03760.t1 AT2G26030 26.932 427 262 18 9 409 4 406 1.47e-16 82.0
MS.gene03760.t1 AT1G78750 27.174 368 221 14 9 346 18 368 1.58e-16 82.0
MS.gene03760.t1 AT1G78750 27.174 368 221 14 9 346 18 368 1.58e-16 82.0
MS.gene03760.t1 AT1G06630 30.471 361 207 15 9 346 12 351 1.91e-16 80.9
MS.gene03760.t1 AT1G06630 30.471 361 207 15 9 346 12 351 1.91e-16 80.9
MS.gene03760.t1 AT4G09920 29.010 293 187 9 9 294 2 280 2.78e-16 79.7
MS.gene03760.t1 AT4G09920 29.010 293 187 9 9 294 2 280 2.78e-16 79.7
MS.gene03760.t1 AT4G09920 29.010 293 187 9 9 294 2 280 2.78e-16 79.7
MS.gene03760.t1 AT5G38392 35.407 209 107 7 9 199 2 200 2.84e-16 78.2
MS.gene03760.t1 AT5G38590 30.000 300 181 12 9 299 2 281 3.16e-16 79.3
MS.gene03760.t1 AT1G06630 30.387 362 208 15 8 346 20 360 3.36e-16 80.9
MS.gene03760.t1 AT1G05080 27.725 422 262 15 8 411 12 408 3.62e-16 80.9
MS.gene03760.t1 AT1G06630 30.387 362 208 15 8 346 11 351 3.79e-16 80.5
MS.gene03760.t1 AT1G06630 30.387 362 208 15 8 346 11 351 3.79e-16 80.5
MS.gene03760.t1 AT1G06630 30.387 362 208 15 8 346 11 351 3.79e-16 80.5
MS.gene03760.t1 AT1G06630 30.387 362 208 15 8 346 11 351 3.79e-16 80.5
MS.gene03760.t1 AT1G16930 26.562 448 243 19 9 423 15 409 4.03e-16 80.9
MS.gene03760.t1 AT1G16930 26.562 448 243 19 9 423 15 409 4.03e-16 80.9
MS.gene03760.t1 AT1G16930 26.562 448 243 19 9 423 15 409 4.03e-16 80.9
MS.gene03760.t1 AT1G66310 26.049 453 281 16 4 433 14 435 4.05e-16 80.9
MS.gene03760.t1 AT3G44060 28.496 379 209 18 14 360 4 352 4.52e-16 80.5
MS.gene03760.t1 AT5G56820 24.722 449 274 16 9 442 15 414 4.66e-16 80.5
MS.gene03760.t1 AT1G06630 30.471 361 207 15 9 346 12 351 5.03e-16 80.5
MS.gene03760.t1 AT1G52650 25.566 442 263 14 9 411 2 416 5.47e-16 80.5
MS.gene03760.t1 AT5G18780 26.269 453 259 18 8 425 10 422 6.28e-16 80.1
MS.gene03760.t1 AT5G18780 26.269 453 259 18 8 425 10 422 6.28e-16 80.1
MS.gene03760.t1 AT3G58930 26.546 388 214 12 9 346 2 368 7.07e-16 80.1
MS.gene03760.t1 AT3G58930 26.546 388 214 12 9 346 2 368 7.07e-16 80.1
MS.gene03760.t1 AT3G58930 26.546 388 214 12 9 346 2 368 7.07e-16 80.1
MS.gene03760.t1 AT2G29930 28.800 375 191 20 9 346 12 347 8.54e-16 79.7
MS.gene03760.t1 AT2G29930 28.800 375 191 20 9 346 12 347 8.54e-16 79.7
MS.gene03760.t1 AT3G58900 30.581 327 182 10 9 300 2 318 1.35e-15 78.2
MS.gene03760.t1 AT3G58900 30.581 327 182 10 9 300 2 318 1.35e-15 78.2
MS.gene03760.t1 AT3G58980 26.913 379 228 13 9 356 2 362 1.46e-15 79.7
MS.gene03760.t1 AT3G58900 30.341 323 182 9 9 298 2 314 1.46e-15 77.8
MS.gene03760.t1 AT5G27750 25.167 449 261 20 9 411 5 424 2.02e-15 78.6
MS.gene03760.t1 AT5G38390 25.682 440 261 19 9 412 2 411 2.27e-15 78.6
MS.gene03760.t1 AT5G38386 23.782 349 203 8 9 346 2 298 6.55e-15 76.6
MS.gene03760.t1 AT5G38386 23.782 349 203 8 9 346 2 298 6.55e-15 76.6
MS.gene03760.t1 AT4G13985 27.596 366 230 12 4 346 14 367 7.50e-15 77.0
MS.gene03760.t1 AT3G26920 25.634 355 228 14 89 434 2 329 1.18e-14 75.5
MS.gene03760.t1 AT3G26920 25.634 355 228 14 89 434 2 329 1.18e-14 75.5
MS.gene03760.t1 AT5G56700 29.730 333 194 17 93 413 48 352 1.55e-14 75.1
MS.gene03760.t1 AT3G14710 27.316 421 263 16 3 409 20 411 1.57e-14 75.9
MS.gene03760.t1 AT3G52680 28.412 359 199 13 9 346 21 342 1.66e-14 75.1
MS.gene03760.t1 AT3G59150 28.896 308 183 13 9 290 13 310 1.75e-14 75.9
MS.gene03760.t1 AT1G66290 25.694 432 263 17 4 411 24 421 1.82e-14 75.9
MS.gene03760.t1 AT5G22610 26.147 436 269 16 8 425 17 417 2.17e-14 75.5
MS.gene03760.t1 AT3G42770 31.270 307 166 12 14 294 4 291 2.26e-14 75.9
MS.gene03760.t1 AT1G48400 26.904 394 211 13 9 346 10 382 2.50e-14 75.5
MS.gene03760.t1 AT5G22610 26.106 452 279 16 8 425 17 447 3.42e-14 75.1
MS.gene03760.t1 AT5G22700 34.010 197 102 8 7 193 41 219 4.68e-14 74.3
MS.gene03760.t1 AT5G22730 24.942 433 267 14 8 409 27 432 4.84e-14 74.3
MS.gene03760.t1 AT5G22730 24.942 433 267 14 8 409 27 432 4.84e-14 74.3
MS.gene03760.t1 AT5G25860 28.499 393 218 18 9 359 12 383 7.88e-14 73.6
MS.gene03760.t1 AT1G22000 26.569 478 273 22 2 440 22 460 1.19e-13 73.2
MS.gene03760.t1 AT3G59180 28.669 293 169 11 75 344 48 323 1.78e-13 72.8
MS.gene03760.t1 AT3G49150 25.265 471 300 16 7 442 14 467 1.82e-13 72.8
MS.gene03760.t1 AT3G59000 32.407 216 115 10 9 196 2 214 2.10e-13 71.6
MS.gene03760.t1 AT3G58940 26.374 364 214 10 9 346 2 337 3.46e-13 72.0
MS.gene03760.t1 AT3G58940 26.374 364 214 10 9 346 2 337 3.46e-13 72.0
MS.gene03760.t1 AT5G56370 29.070 344 208 15 9 346 2 315 4.54e-13 70.5
MS.gene03760.t1 AT5G22660 26.126 444 247 20 8 411 12 414 4.95e-13 71.2
MS.gene03760.t1 AT5G18770 27.451 357 218 13 9 342 24 362 7.07e-13 70.5
MS.gene03760.t1 AT3G59000 34.659 176 98 6 9 169 2 175 7.34e-13 70.9
MS.gene03760.t1 AT5G22720 26.889 450 248 19 4 409 18 430 8.73e-13 70.5
MS.gene03760.t1 AT5G18780 26.810 373 204 14 9 347 11 348 9.03e-13 70.1
MS.gene03760.t1 AT5G18780 26.810 373 204 14 9 347 11 348 9.03e-13 70.1
MS.gene03760.t1 AT3G26922 31.048 248 138 11 8 241 13 241 1.01e-12 69.3
MS.gene03760.t1 AT3G26922 31.048 248 138 11 8 241 13 241 1.01e-12 69.3
MS.gene03760.t1 AT5G56810 26.389 432 274 14 9 427 15 415 2.41e-12 68.9
MS.gene03760.t1 AT5G53640 30.688 189 117 6 7 193 20 196 3.15e-12 66.6
MS.gene03760.t1 AT5G25850 32.984 191 106 8 9 193 20 194 4.46e-12 68.6
MS.gene03760.t1 AT3G54910 25.886 367 236 14 79 438 36 373 4.71e-12 67.8
MS.gene03760.t1 AT3G54910 25.886 367 236 14 79 438 36 373 4.71e-12 67.8
MS.gene03760.t1 AT3G54910 25.886 367 236 14 79 438 36 373 4.71e-12 67.8
MS.gene03760.t1 AT1G16940 24.396 414 257 16 8 408 10 380 5.41e-12 67.8
MS.gene03760.t1 AT5G38590 33.582 134 87 2 9 140 2 135 6.36e-12 66.6
MS.gene03760.t1 AT5G56390 24.882 422 271 14 9 413 2 394 6.57e-12 67.8
MS.gene03760.t1 AT3G56780 31.217 189 114 6 11 195 9 185 6.58e-12 67.4
MS.gene03760.t1 AT5G41630 26.651 424 236 14 9 377 12 415 6.75e-12 67.8
MS.gene03760.t1 AT1G66320 24.242 429 277 17 4 411 25 426 9.25e-12 67.4
MS.gene03760.t1 AT1G48400 30.182 275 159 10 9 264 10 270 3.44e-11 65.9
MS.gene03760.t1 AT5G22730 30.303 198 121 6 8 199 27 213 4.60e-11 64.7
MS.gene03760.t1 AT2G29910 31.053 190 117 6 9 195 5 183 8.41e-11 63.5
MS.gene03760.t1 AT2G29910 31.053 190 117 6 9 195 5 183 8.41e-11 63.5

Find 84 sgRNAs with CRISPR-Local

Find 109 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCATTGCATTTGAATTTAA+AGG 0.125528 4.3:+45231022 MS.gene03760:CDS
ACTTAAGGATCTTGCAATTA+TGG 0.162434 4.3:+45230586 MS.gene03760:CDS
ATGTACAAATTTGATTTCTT+TGG 0.230513 4.3:-45229655 None:intergenic
AGAAATCCTCCGTACTAGTA+TGG 0.259970 4.3:+45231179 MS.gene03760:CDS
ACATGTTCTATAACACTCTT+TGG 0.268393 4.3:-45229547 None:intergenic
ATTGCAAGATCCTTAAGTTT+TGG 0.271802 4.3:-45230581 None:intergenic
TTCTCTTGTTGATGTTTCAT+TGG 0.279764 4.3:+45230181 MS.gene03760:CDS
ATCTGGTTGTCCACATTTAG+AGG 0.284140 4.3:+45230016 MS.gene03760:CDS
TATAACACTCTTTGGTTGAT+AGG 0.294346 4.3:-45229539 None:intergenic
ACAGATCCAAGTCAAGTTTC+TGG 0.309423 4.3:-45229791 None:intergenic
TAATTCAATTGAAGATCATT+TGG 0.321337 4.3:+45231462 MS.gene03760:CDS
TCACAAGTTATTATATTTAA+CGG 0.359548 4.3:+45230502 MS.gene03760:CDS
TATCCTGTAACTAGATTAAG+AGG 0.361958 4.3:-45231518 None:intergenic
AGTTTCCAACCTCATTTCTT+CGG 0.365062 4.3:-45230952 None:intergenic
GATTATTCCTTACTTTATAT+AGG 0.375374 4.3:+45230099 MS.gene03760:CDS
GTTTCCAACCTCATTTCTTC+GGG 0.376468 4.3:-45230951 None:intergenic
GGTGGTGTTCATTGAAATCT+TGG 0.383907 4.3:-45231491 None:intergenic
ACTCGTGGTCTTAAAATTGC+GGG 0.408358 4.3:+45229863 MS.gene03760:CDS
ATGAGGTTGGAAACTCTAGA+TGG 0.416736 4.3:+45230960 MS.gene03760:CDS
AAAGTGAAGGTTGGGAATCT+TGG 0.417455 4.3:-45229601 None:intergenic
ACAGAATGCTCCAAAACTTA+AGG 0.424972 4.3:+45230571 MS.gene03760:CDS
GGTAATTGAAAGTGAAGGTT+GGG 0.443422 4.3:-45229609 None:intergenic
AAGTGAAAAGAGGTGTTGAT+AGG 0.462824 4.3:-45230068 None:intergenic
AAGTAGGCCTATATAAAGTA+AGG 0.476895 4.3:-45230106 None:intergenic
GTATACAAATTGTTAAAATC+CGG 0.478212 4.3:-45230272 None:intergenic
AAATTCAAATGCAATGAGAC+TGG 0.478300 4.3:-45231017 None:intergenic
TTGATTTCTTTGGACAACTC+AGG 0.483223 4.3:-45229645 None:intergenic
TGTAAGTCACTCAAGTAAGT+TGG 0.491102 4.3:+45231087 MS.gene03760:CDS
TCTTTGCATTTGTAAGCGTC+CGG 0.498367 4.3:+45230253 MS.gene03760:CDS
CAAGGTCCAGAAACTTGACT+TGG 0.499109 4.3:+45229785 MS.gene03760:CDS
AATTTGTATACACTCTTGAA+AGG 0.500652 4.3:+45230284 MS.gene03760:CDS
GTAACTAGATTAAGAGGGTC+GGG 0.502456 4.3:-45231512 None:intergenic
TGATTTCTTTGGACAACTCA+GGG 0.514750 4.3:-45229644 None:intergenic
AACTCAGGGTCTGAAATCTC+TGG 0.516045 4.3:-45229630 None:intergenic
AATGTCAGAACATTGGCTCT+AGG 0.521054 4.3:+45230314 MS.gene03760:CDS
TCTCTTCAATAAGTGAAAAG+AGG 0.524063 4.3:-45230078 None:intergenic
TGTACACATGTGGGTTTCAA+AGG 0.528762 4.3:+45229752 MS.gene03760:CDS
AGAGAAACAACTTCAAGTGC+AGG 0.530138 4.3:-45230164 None:intergenic
GAAATCCTCCGTACTAGTAT+GGG 0.530507 4.3:+45231180 MS.gene03760:CDS
TAGAATACGCCACAGTTTCA+CGG 0.532092 4.3:-45229953 None:intergenic
TACTTTATATAGGCCTACTT+CGG 0.536022 4.3:+45230109 MS.gene03760:CDS
AATCAGTTCCCGAAGAAATG+AGG 0.538157 4.3:+45230943 MS.gene03760:CDS
CACTCGTGGTCTTAAAATTG+CGG 0.539007 4.3:+45229862 MS.gene03760:CDS
CATGTGTTCTATCCACAAGA+TGG 0.542093 4.3:+45229565 MS.gene03760:CDS
TTCAAAGGCATTAGATCTCA+AGG 0.542872 4.3:+45229767 MS.gene03760:CDS
TGGTAATTGAAAGTGAAGGT+TGG 0.551378 4.3:-45229610 None:intergenic
CTAAGTCTTGATAGCAACAA+AGG 0.551526 4.3:+45229714 MS.gene03760:CDS
CAACTCTTAATAACCGAAGT+AGG 0.552066 4.3:-45230122 None:intergenic
GAGAAACAACTTCAAGTGCA+GGG 0.552832 4.3:-45230163 None:intergenic
TGTTATGCAGTTTCTCAGCA+TGG 0.553413 4.3:+45230445 MS.gene03760:intron
GCAGGGGCATTAATTTGTAG+TGG 0.570310 4.3:-45230146 None:intergenic
GCAGATCGACTCCCATCTTG+TGG 0.572297 4.3:-45229577 None:intergenic
ATGTGTTCTATCCACAAGAT+GGG 0.579779 4.3:+45229566 MS.gene03760:CDS
AAACTCTACCCATACTAGTA+CGG 0.585858 4.3:-45231188 None:intergenic
AAATATCTGAGAATTGCAGT+TGG 0.586019 4.3:+45230528 MS.gene03760:CDS
AAAAGAAGTTCCTCTAAATG+TGG 0.586355 4.3:-45230026 None:intergenic
ACTTTCTAATGTCAGAACAT+TGG 0.587029 4.3:+45230307 MS.gene03760:CDS
TGAAAAGAAGAATTGAGTGT+TGG 0.588267 4.3:-45229897 None:intergenic
AGACTGGTTGTAAGACATGC+CGG 0.589947 4.3:-45231001 None:intergenic
AGTTCCCGAAGAAATGAGGT+TGG 0.592639 4.3:+45230947 MS.gene03760:CDS
TCACTCAAGTAAGTTGGAGA+AGG 0.592918 4.3:+45231093 MS.gene03760:CDS
GGTGGAGCCATCAGTAACTC+CGG 0.595318 4.3:+45230982 MS.gene03760:CDS
TGTAACTAGATTAAGAGGGT+CGG 0.598827 4.3:-45231513 None:intergenic
CTCTACCCATACTAGTACGG+AGG 0.606672 4.3:-45231185 None:intergenic
AGACATGCCGGAGTTACTGA+TGG 0.614504 4.3:-45230989 None:intergenic
TGAGGTTGGAAACTCTAGAT+GGG 0.616468 4.3:+45230961 MS.gene03760:CDS
TTCCACGTGTGAGTCACTCG+TGG 0.631019 4.3:+45229848 MS.gene03760:CDS
TCTTCATCTCCGTGAAACTG+TGG 0.632446 4.3:+45229944 MS.gene03760:CDS
GGTGTTGATAGGTAATGCAA+AGG 0.643336 4.3:-45230057 None:intergenic
GCCACATGATGTACACATGT+GGG 0.650684 4.3:+45229743 MS.gene03760:CDS
AGAAACAACTTCAAGTGCAG+GGG 0.652750 4.3:-45230162 None:intergenic
GGTTGGAAACTCTAGATGGG+TGG 0.653900 4.3:+45230964 MS.gene03760:CDS
ACATGTGTACATCATGTGGC+TGG 0.656362 4.3:-45229740 None:intergenic
AGATGAAGAATCTTTAGTGA+CGG 0.657169 4.3:-45229930 None:intergenic
ACCCACATGTGTACATCATG+TGG 0.672342 4.3:-45229744 None:intergenic
GCGTATTCTATGCTTGATGA+CGG 0.672908 4.3:+45229966 MS.gene03760:CDS
CTCGTGGTCTTAAAATTGCG+GGG 0.673910 4.3:+45229864 MS.gene03760:CDS
GACCACGAGTGACTCACACG+TGG 0.682798 4.3:-45229850 None:intergenic
AGCCACATGATGTACACATG+TGG 0.685172 4.3:+45229742 MS.gene03760:CDS
TCTCTGGTAATTGAAAGTGA+AGG 0.696256 4.3:-45229614 None:intergenic
TCACACGTGGAAAGCCTAAG+CGG 0.701582 4.3:-45229837 None:intergenic
TATGCAGTTTCTCAGCATGG+AGG 0.703511 4.3:+45230448 MS.gene03760:intron
ACTAGATTAAGAGGGTCGGG+TGG 0.718609 4.3:-45231509 None:intergenic
ATCCTGTAACTAGATTAAGA+GGG 0.720026 4.3:-45231517 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAATTAATTAAATTGTTTAT+CGG - chr4.3:45230743-45230762 None:intergenic 10.0%
!! TTTAAAAGATGAAATATAAT+AGG + chr4.3:45230653-45230672 MS.gene03760:intron 10.0%
!! TCACAAGTTATTATATTTAA+CGG + chr4.3:45230502-45230521 MS.gene03760:CDS 15.0%
!!! AATTATTCAATATTTGTTAC+AGG + chr4.3:45231435-45231454 MS.gene03760:intron 15.0%
!!! ACTTAGTTTTCTTATATTTT+CGG - chr4.3:45229700-45229719 None:intergenic 15.0%
!! AAGTAAAATAGTTTGAAAGA+AGG - chr4.3:45230817-45230836 None:intergenic 20.0%
!! GATTATTCCTTACTTTATAT+AGG + chr4.3:45230099-45230118 MS.gene03760:CDS 20.0%
!! GTATACAAATTGTTAAAATC+CGG - chr4.3:45230275-45230294 None:intergenic 20.0%
!! TAATTCAATTGAAGATCATT+TGG + chr4.3:45231462-45231481 MS.gene03760:CDS 20.0%
!! TATATATACAATTACATTCG+TGG + chr4.3:45231331-45231350 MS.gene03760:intron 20.0%
!!! ATGTACAAATTTGATTTCTT+TGG - chr4.3:45229658-45229677 None:intergenic 20.0%
!!! TATTATTAGAATTTTCCAAC+TGG - chr4.3:45230893-45230912 None:intergenic 20.0%
!!! TTTGTAAAGTCATATTTTCT+AGG - chr4.3:45230209-45230228 None:intergenic 20.0%
! AATGAGAATAGAATTGCATA+TGG - chr4.3:45230416-45230435 None:intergenic 25.0%
! AATTTGTATACACTCTTGAA+AGG + chr4.3:45230284-45230303 MS.gene03760:CDS 25.0%
! AGTTTGAAAGAAGGTTAAAT+TGG - chr4.3:45230808-45230827 None:intergenic 25.0%
! ATGAGAATAGAATTGCATAT+GGG - chr4.3:45230415-45230434 None:intergenic 25.0%
! CTATTTACTATATATCCAGT+TGG + chr4.3:45230875-45230894 MS.gene03760:intron 25.0%
! CTCATTGCATTTGAATTTAA+AGG + chr4.3:45231022-45231041 MS.gene03760:CDS 25.0%
! GTTTGAAAGAAGGTTAAATT+GGG - chr4.3:45230807-45230826 None:intergenic 25.0%
! TCAAAACATAAAAACTGAGT+TGG + chr4.3:45231048-45231067 MS.gene03760:CDS 25.0%
!! AAAAAATATTATTGCCGCTT+AGG + chr4.3:45229823-45229842 MS.gene03760:CDS 25.0%
!! AATATCTAGAACAATAAGAG+AGG - chr4.3:45231271-45231290 None:intergenic 25.0%
!! GAAAGTATATAAACTCTGTA+TGG - chr4.3:45231231-45231250 None:intergenic 25.0%
!! GATCTCAATAATTTTCTATC+TGG + chr4.3:45229999-45230018 MS.gene03760:CDS 25.0%
AAAAGAAGTTCCTCTAAATG+TGG - chr4.3:45230029-45230048 None:intergenic 30.0%
AAATATCTGAGAATTGCAGT+TGG + chr4.3:45230528-45230547 MS.gene03760:CDS 30.0%
AAATTCAAATGCAATGAGAC+TGG - chr4.3:45231020-45231039 None:intergenic 30.0%
AAGTAGGCCTATATAAAGTA+AGG - chr4.3:45230109-45230128 None:intergenic 30.0%
ACATGTTCTATAACACTCTT+TGG - chr4.3:45229550-45229569 None:intergenic 30.0%
ACTTAAGGATCTTGCAATTA+TGG + chr4.3:45230586-45230605 MS.gene03760:CDS 30.0%
ACTTTCTAATGTCAGAACAT+TGG + chr4.3:45230307-45230326 MS.gene03760:CDS 30.0%
AGATGAAGAATCTTTAGTGA+CGG - chr4.3:45229933-45229952 None:intergenic 30.0%
AGTAGAAAAAAGTTTACGCA+TGG + chr4.3:45231150-45231169 MS.gene03760:CDS 30.0%
ATATAATAGGCTCAAAAGTC+TGG + chr4.3:45230666-45230685 MS.gene03760:intron 30.0%
GACATATAAAGTTGTGTTGA+TGG - chr4.3:45231302-45231321 None:intergenic 30.0%
GTAGAAAAAAGTTTACGCAT+GGG + chr4.3:45231151-45231170 MS.gene03760:CDS 30.0%
TACTTTATATAGGCCTACTT+CGG + chr4.3:45230109-45230128 MS.gene03760:CDS 30.0%
TAGAAAAAAGTTTACGCATG+GGG + chr4.3:45231152-45231171 MS.gene03760:CDS 30.0%
TATAACACTCTTTGGTTGAT+AGG - chr4.3:45229542-45229561 None:intergenic 30.0%
TCTCTTCAATAAGTGAAAAG+AGG - chr4.3:45230081-45230100 None:intergenic 30.0%
TGAAAAGAAGAATTGAGTGT+TGG - chr4.3:45229900-45229919 None:intergenic 30.0%
TTCTCTTGTTGATGTTTCAT+TGG + chr4.3:45230181-45230200 MS.gene03760:CDS 30.0%
! ATTGCAAGATCCTTAAGTTT+TGG - chr4.3:45230584-45230603 None:intergenic 30.0%
!! TATAAAGTTGTGTTGATGGT+CGG - chr4.3:45231298-45231317 None:intergenic 30.0%
!!! GCGGCAATAATATTTTTTCA+TGG - chr4.3:45229821-45229840 None:intergenic 30.0%
AAACTCTACCCATACTAGTA+CGG - chr4.3:45231191-45231210 None:intergenic 35.0%
AAGACTTGGCGAAATATACA+TGG + chr4.3:45230702-45230721 MS.gene03760:intron 35.0%
ACAGAATGCTCCAAAACTTA+AGG + chr4.3:45230571-45230590 MS.gene03760:CDS 35.0%
AGTTTCCAACCTCATTTCTT+CGG - chr4.3:45230955-45230974 None:intergenic 35.0%
ATGTGTTCTATCCACAAGAT+GGG + chr4.3:45229566-45229585 MS.gene03760:CDS 35.0%
CAACTCTTAATAACCGAAGT+AGG - chr4.3:45230125-45230144 None:intergenic 35.0%
GGTAATTGAAAGTGAAGGTT+GGG - chr4.3:45229612-45229631 None:intergenic 35.0%
TCTCTGGTAATTGAAAGTGA+AGG - chr4.3:45229617-45229636 None:intergenic 35.0%
TGAAAGAAGGTTAAATTGGG+AGG - chr4.3:45230804-45230823 None:intergenic 35.0%
TGATTTCTTTGGACAACTCA+GGG - chr4.3:45229647-45229666 None:intergenic 35.0%
TGCATATGGGAGACTAAATA+TGG - chr4.3:45230402-45230421 None:intergenic 35.0%
TGGTAATTGAAAGTGAAGGT+TGG - chr4.3:45229613-45229632 None:intergenic 35.0%
TGTAAGTCACTCAAGTAAGT+TGG + chr4.3:45231087-45231106 MS.gene03760:CDS 35.0%
TTGATTTCTTTGGACAACTC+AGG - chr4.3:45229648-45229667 None:intergenic 35.0%
! CTAAGTCTTGATAGCAACAA+AGG + chr4.3:45229714-45229733 MS.gene03760:CDS 35.0%
!! AAGTGAAAAGAGGTGTTGAT+AGG - chr4.3:45230071-45230090 None:intergenic 35.0%
!! TTCAAAGGCATTAGATCTCA+AGG + chr4.3:45229767-45229786 MS.gene03760:CDS 35.0%
AAAGTGAAGGTTGGGAATCT+TGG - chr4.3:45229604-45229623 None:intergenic 40.0%
AATCAGTTCCCGAAGAAATG+AGG + chr4.3:45230943-45230962 MS.gene03760:CDS 40.0%
ACAGATCCAAGTCAAGTTTC+TGG - chr4.3:45229794-45229813 None:intergenic 40.0%
AGAAACAACTTCAAGTGCAG+GGG - chr4.3:45230165-45230184 None:intergenic 40.0%
AGAAATCCTCCGTACTAGTA+TGG + chr4.3:45231179-45231198 MS.gene03760:CDS 40.0%
AGAGAAACAACTTCAAGTGC+AGG - chr4.3:45230167-45230186 None:intergenic 40.0%
ATCTGGTTGTCCACATTTAG+AGG + chr4.3:45230016-45230035 MS.gene03760:CDS 40.0%
ATGAGGTTGGAAACTCTAGA+TGG + chr4.3:45230960-45230979 MS.gene03760:CDS 40.0%
CATGTGTTCTATCCACAAGA+TGG + chr4.3:45229565-45229584 MS.gene03760:CDS 40.0%
GAAATCCTCCGTACTAGTAT+GGG + chr4.3:45231180-45231199 MS.gene03760:CDS 40.0%
GAGAAACAACTTCAAGTGCA+GGG - chr4.3:45230166-45230185 None:intergenic 40.0%
GCGTATTCTATGCTTGATGA+CGG + chr4.3:45229966-45229985 MS.gene03760:CDS 40.0%
GGTGGTGTTCATTGAAATCT+TGG - chr4.3:45231494-45231513 None:intergenic 40.0%
GTTTCCAACCTCATTTCTTC+GGG - chr4.3:45230954-45230973 None:intergenic 40.0%
TAGAATACGCCACAGTTTCA+CGG - chr4.3:45229956-45229975 None:intergenic 40.0%
TCTTTGCATTTGTAAGCGTC+CGG + chr4.3:45230253-45230272 MS.gene03760:CDS 40.0%
TGAGGTTGGAAACTCTAGAT+GGG + chr4.3:45230961-45230980 MS.gene03760:CDS 40.0%
TGTACACATGTGGGTTTCAA+AGG + chr4.3:45229752-45229771 MS.gene03760:CDS 40.0%
TGTTATGCAGTTTCTCAGCA+TGG + chr4.3:45230445-45230464 MS.gene03760:intron 40.0%
! ACTCGTGGTCTTAAAATTGC+GGG + chr4.3:45229863-45229882 MS.gene03760:CDS 40.0%
! CACTCGTGGTCTTAAAATTG+CGG + chr4.3:45229862-45229881 MS.gene03760:CDS 40.0%
! TCACTCAAGTAAGTTGGAGA+AGG + chr4.3:45231093-45231112 MS.gene03760:CDS 40.0%
!! AATGTCAGAACATTGGCTCT+AGG + chr4.3:45230314-45230333 MS.gene03760:CDS 40.0%
!! GGTGTTGATAGGTAATGCAA+AGG - chr4.3:45230060-45230079 None:intergenic 40.0%
ACATGTGTACATCATGTGGC+TGG - chr4.3:45229743-45229762 None:intergenic 45.0%
ACCCACATGTGTACATCATG+TGG - chr4.3:45229747-45229766 None:intergenic 45.0%
AGCCACATGATGTACACATG+TGG + chr4.3:45229742-45229761 MS.gene03760:CDS 45.0%
AGTTCCCGAAGAAATGAGGT+TGG + chr4.3:45230947-45230966 MS.gene03760:CDS 45.0%
CAAGGTCCAGAAACTTGACT+TGG + chr4.3:45229785-45229804 MS.gene03760:CDS 45.0%
GCACTAGAAGAGCAAAGACT+TGG + chr4.3:45230688-45230707 MS.gene03760:intron 45.0%
GCCACATGATGTACACATGT+GGG + chr4.3:45229743-45229762 MS.gene03760:CDS 45.0%
TATGCAGTTTCTCAGCATGG+AGG + chr4.3:45230448-45230467 MS.gene03760:intron 45.0%
TCTTCATCTCCGTGAAACTG+TGG + chr4.3:45229944-45229963 MS.gene03760:CDS 45.0%
! AACTCAGGGTCTGAAATCTC+TGG - chr4.3:45229633-45229652 None:intergenic 45.0%
! AGACTGGTTGTAAGACATGC+CGG - chr4.3:45231004-45231023 None:intergenic 45.0%
! CTCGTGGTCTTAAAATTGCG+GGG + chr4.3:45229864-45229883 MS.gene03760:CDS 45.0%
!! GCAGGGGCATTAATTTGTAG+TGG - chr4.3:45230149-45230168 None:intergenic 45.0%
!!! AAAATTCTAATAATATTTTT+TGG + chr4.3:45230898-45230917 MS.gene03760:intron 5.0%
AGACATGCCGGAGTTACTGA+TGG - chr4.3:45230992-45231011 None:intergenic 50.0%
CTCTACCCATACTAGTACGG+AGG - chr4.3:45231188-45231207 None:intergenic 50.0%
GGTTGGAAACTCTAGATGGG+TGG + chr4.3:45230964-45230983 MS.gene03760:CDS 50.0%
TCACACGTGGAAAGCCTAAG+CGG - chr4.3:45229840-45229859 None:intergenic 50.0%
GGTGGAGCCATCAGTAACTC+CGG + chr4.3:45230982-45231001 MS.gene03760:CDS 55.0%
TTCCACGTGTGAGTCACTCG+TGG + chr4.3:45229848-45229867 MS.gene03760:CDS 55.0%
! GCAGATCGACTCCCATCTTG+TGG - chr4.3:45229580-45229599 None:intergenic 55.0%
GACCACGAGTGACTCACACG+TGG - chr4.3:45229853-45229872 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 45229465 45231525 45229465 ID=MS.gene03760
chr4.3 mRNA 45229465 45231525 45229465 ID=MS.gene03760.t1;Parent=MS.gene03760
chr4.3 exon 45229465 45230352 45229465 ID=MS.gene03760.t1.exon1;Parent=MS.gene03760.t1
chr4.3 CDS 45229465 45230352 45229465 ID=cds.MS.gene03760.t1;Parent=MS.gene03760.t1
chr4.3 exon 45230455 45230607 45230455 ID=MS.gene03760.t1.exon2;Parent=MS.gene03760.t1
chr4.3 CDS 45230455 45230607 45230455 ID=cds.MS.gene03760.t1;Parent=MS.gene03760.t1
chr4.3 exon 45230932 45231201 45230932 ID=MS.gene03760.t1.exon3;Parent=MS.gene03760.t1
chr4.3 CDS 45230932 45231201 45230932 ID=cds.MS.gene03760.t1;Parent=MS.gene03760.t1
chr4.3 exon 45231457 45231525 45231457 ID=MS.gene03760.t1.exon4;Parent=MS.gene03760.t1
chr4.3 CDS 45231457 45231525 45231457 ID=cds.MS.gene03760.t1;Parent=MS.gene03760.t1
Gene Sequence

>MS.gene03760

ATGGCGTGCTCTGATGAAAAACATGATCGATTAAGCAATCTCTCAGACGATTTGATTTGTCATATTTTGTCATTCCTATCAACCAAAGAGTGTTATAGAACATGTGTTCTATCCACAAGATGGGAGTCGATCTGCACCAAGATTCCCAACCTTCACTTTCAATTACCAGAGATTTCAGACCCTGAGTTGTCCAAAGAAATCAAATTTGTACATGTTGCTCTCTTAAGACGCTCCGAAAATATAAGAAAACTAAGTCTTGATAGCAACAAAGGCTGCCAGCCACATGATGTACACATGTGGGTTTCAAAGGCATTAGATCTCAAGGTCCAGAAACTTGACTTGGATCTGTTTCTCCATGAAAAAATATTATTGCCGCTTAGGCTTTCCACGTGTGAGTCACTCGTGGTCTTAAAATTGCGGGGCAGAATTCAACCAACACTCAATTCTTCTTTTCATGTATATTTACCGTCACTAAAGATTCTTCATCTCCGTGAAACTGTGGCGTATTCTATGCTTGATGACGGTAAAGAGTATGATCTCAATAATTTTCTATCTGGTTGTCCACATTTAGAGGAACTTCTTTTACATGAGACCTTTGCATTACCTATCAACACCTCTTTTCACTTATTGAAGAGATTATTCCTTACTTTATATAGGCCTACTTCGGTTATTAAGAGTTGTCCACTACAAATTAATGCCCCTGCACTTGAAGTTGTTTCTCTTGTTGATGTTTCATTGGCTCCTAGAAAATATGACTTTACAAACTTGTCAAATCTTGATGAAGCTGCTCTTTGCATTTGTAAGCGTCCGGATTTTAACAATTTGTATACACTCTTGAAAGGACTTTCTAATGTCAGAACATTGGCTCTAGGTTCTAAAACTTTTCATGTAAGTTTCATAAATATTTTTCTTTTTTAATTAAAATTTACAAGTTCCATATTTAGTCTCCCATATGCAATTCTATTCTCATTTTATAATTTTGTTATGCAGTTTCTCAGCATGGAGGACAAACTTGACAACTTGCATCGTCTCACTTTTCACAAGTTATTATATTTAACGGTTGAAATATCTGAGAATTGCAGTTGGAATATGCTCGTCAGCTTTCTACAGAATGCTCCAAAACTTAAGGATCTTGCAATTATGGTGTGTATGATGTTCTTTTAACTATATTTGCACAATATATTTTTTTTTAAAAGATGAAATATAATAGGCTCAAAAGTCTGGCACTAGAAGAGCAAAGACTTGGCGAAATATACATGGAGTTTGCAAATAAAACCGATAAACAATTTAATTAATTCTAAACAATCTATATCTGATCTATGTTTGTGTAGATTTTCCTCCCAATTTAACCTTCTTTCAAACTATTTTACTTTCAATTTTATCTTTATTTACTTAATAATATAATTGAAACTATTTACTATATATCCAGTTGGAAAATTCTAATAATATTTTTTGGTTTTCTTGCAGAGAAAAATTGAAATCAGTTCCCGAAGAAATGAGGTTGGAAACTCTAGATGGGTGGAGCCATCAGTAACTCCGGCATGTCTTACAACCAGTCTCATTGCATTTGAATTTAAAGGAATTCAAAACATAAAAACTGAGTTGGACTTTACGCGATATATTGTAAGTCACTCAAGTAAGTTGGAGAAGGTAAAGATTTTCACAGCTACTGCAAAGAAAAGAAGAGTAGAAAAAAGTTTACGCATGGGGTCAAAGAAATCCTCCGTACTAGTATGGGTAGAGTTTACACACATTCTTTTATTCCATACAGAGTTTATATACTTTCTGTTTTAGAACTTTCATCCTCTCTTATTGTTCTAGATATTAACTCCGACCATCAACACAACTTTATATGTCTTGAATTTATATATATACAATTACATTCGTGGTTGAGAATAAGACTGTTTTTGTTAAAATAAATAAATTTATACTCTAATGAATTTATCATTTATGTTTATAATCTTAAAATTAATTATTCAATATTTGTTACAGGATATTAATTCAATTGAAGATCATTTGGATTTCTCCAAGATTTCAATGAACACCACCCGACCCTCTTAA

Protein sequence

>MS.gene03760.t1

MACSDEKHDRLSNLSDDLICHILSFLSTKECYRTCVLSTRWESICTKIPNLHFQLPEISDPELSKEIKFVHVALLRRSENIRKLSLDSNKGCQPHDVHMWVSKALDLKVQKLDLDLFLHEKILLPLRLSTCESLVVLKLRGRIQPTLNSSFHVYLPSLKILHLRETVAYSMLDDGKEYDLNNFLSGCPHLEELLLHETFALPINTSFHLLKRLFLTLYRPTSVIKSCPLQINAPALEVVSLVDVSLAPRKYDFTNLSNLDEAALCICKRPDFNNLYTLLKGLSNVRTLALGSKTFHFLSMEDKLDNLHRLTFHKLLYLTVEISENCSWNMLVSFLQNAPKLKDLAIMRKIEISSRRNEVGNSRWVEPSVTPACLTTSLIAFEFKGIQNIKTELDFTRYIVSHSSKLEKVKIFTATAKKRRVEKSLRMGSKKSSVLVWDINSIEDHLDFSKISMNTTRPS