Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03748.t1 | XP_013455881.1 | 93.4 | 437 | 29 | 0 | 1 | 437 | 1 | 437 | 3.50E-214 | 754.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03748.t1 | Q3EAE5 | 27.4 | 457 | 244 | 18 | 9 | 439 | 2 | 396 | 2.1e-18 | 95.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03748.t1 | A0A072UJS8 | 93.4 | 437 | 29 | 0 | 1 | 437 | 1 | 437 | 2.5e-214 | 754.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03748.t1 | MTR_4g056070 | 95.195 | 437 | 21 | 0 | 1 | 437 | 1 | 437 | 0.0 | 845 |
MS.gene03748.t1 | MTR_4g055990 | 74.900 | 502 | 80 | 3 | 1 | 459 | 1 | 499 | 0.0 | 724 |
MS.gene03748.t1 | MTR_4g055990 | 81.532 | 444 | 74 | 2 | 1 | 439 | 1 | 441 | 0.0 | 716 |
MS.gene03748.t1 | MTR_4g056040 | 81.777 | 439 | 70 | 3 | 1 | 439 | 1 | 429 | 0.0 | 714 |
MS.gene03748.t1 | MTR_4g055580 | 74.549 | 499 | 84 | 4 | 1 | 461 | 92 | 585 | 0.0 | 707 |
MS.gene03748.t1 | MTR_4g056020 | 70.825 | 497 | 67 | 2 | 1 | 459 | 1 | 457 | 0.0 | 676 |
MS.gene03748.t1 | MTR_4g056030 | 68.228 | 491 | 78 | 2 | 1 | 453 | 1 | 451 | 0.0 | 642 |
MS.gene03748.t1 | MTR_1g038710 | 62.217 | 442 | 127 | 4 | 1 | 439 | 11 | 415 | 1.02e-175 | 500 |
MS.gene03748.t1 | MTR_1g090883 | 56.234 | 393 | 128 | 6 | 2 | 392 | 12 | 362 | 5.01e-131 | 384 |
MS.gene03748.t1 | MTR_7g110920 | 56.563 | 320 | 85 | 3 | 139 | 439 | 1 | 285 | 2.74e-109 | 326 |
MS.gene03748.t1 | MTR_4g093690 | 50.000 | 312 | 107 | 8 | 1 | 308 | 10 | 276 | 4.62e-75 | 237 |
MS.gene03748.t1 | MTR_4g056020 | 64.596 | 161 | 19 | 1 | 337 | 459 | 1 | 161 | 3.40e-61 | 197 |
MS.gene03748.t1 | MTR_4g056010 | 95.000 | 100 | 5 | 0 | 108 | 207 | 1 | 100 | 7.60e-61 | 194 |
MS.gene03748.t1 | MTR_1g090900 | 52.055 | 219 | 62 | 5 | 1 | 216 | 1 | 179 | 3.44e-53 | 177 |
MS.gene03748.t1 | MTR_5g084070 | 29.120 | 443 | 237 | 14 | 5 | 439 | 9 | 382 | 9.15e-26 | 109 |
MS.gene03748.t1 | MTR_7g115270 | 27.416 | 445 | 218 | 17 | 9 | 443 | 12 | 361 | 1.61e-23 | 102 |
MS.gene03748.t1 | MTR_8g062270 | 28.412 | 447 | 254 | 17 | 9 | 439 | 16 | 412 | 2.39e-23 | 102 |
MS.gene03748.t1 | MTR_8g445780 | 27.438 | 441 | 247 | 13 | 7 | 436 | 11 | 389 | 3.39e-23 | 101 |
MS.gene03748.t1 | MTR_5g080710 | 28.571 | 441 | 240 | 14 | 9 | 439 | 33 | 408 | 3.93e-23 | 102 |
MS.gene03748.t1 | MTR_8g014260 | 28.194 | 454 | 246 | 16 | 6 | 439 | 13 | 406 | 5.26e-23 | 101 |
MS.gene03748.t1 | MTR_3g108560 | 28.412 | 447 | 196 | 18 | 6 | 443 | 17 | 348 | 2.14e-22 | 99.0 |
MS.gene03748.t1 | MTR_8g058970 | 26.824 | 466 | 272 | 17 | 4 | 444 | 14 | 435 | 3.26e-21 | 96.3 |
MS.gene03748.t1 | MTR_8g467800 | 28.540 | 459 | 251 | 16 | 5 | 444 | 16 | 416 | 4.49e-21 | 95.9 |
MS.gene03748.t1 | MTR_7g056433 | 25.446 | 448 | 220 | 18 | 4 | 443 | 7 | 348 | 2.84e-20 | 92.8 |
MS.gene03748.t1 | MTR_8g468810 | 26.949 | 449 | 263 | 17 | 4 | 439 | 20 | 416 | 1.36e-19 | 91.3 |
MS.gene03748.t1 | MTR_8g468840 | 26.522 | 460 | 256 | 18 | 8 | 444 | 13 | 413 | 1.73e-19 | 90.9 |
MS.gene03748.t1 | MTR_1g041245 | 32.314 | 229 | 109 | 7 | 9 | 236 | 11 | 194 | 6.87e-19 | 88.6 |
MS.gene03748.t1 | MTR_1g090890 | 71.698 | 53 | 12 | 1 | 390 | 439 | 29 | 81 | 1.02e-18 | 82.0 |
MS.gene03748.t1 | MTR_5g008950 | 25.390 | 449 | 196 | 17 | 11 | 443 | 1 | 326 | 1.19e-18 | 87.8 |
MS.gene03748.t1 | MTR_2g083840 | 28.664 | 464 | 234 | 22 | 9 | 444 | 21 | 415 | 4.41e-18 | 86.7 |
MS.gene03748.t1 | MTR_5g007410 | 24.829 | 439 | 225 | 18 | 11 | 443 | 28 | 367 | 6.56e-16 | 80.1 |
MS.gene03748.t1 | MTR_8g058965 | 27.932 | 469 | 246 | 21 | 9 | 447 | 13 | 419 | 2.69e-14 | 75.1 |
MS.gene03748.t1 | MTR_3g108560 | 28.426 | 394 | 156 | 17 | 6 | 387 | 17 | 296 | 2.32e-13 | 71.2 |
MS.gene03748.t1 | MTR_8g467800 | 29.191 | 346 | 175 | 11 | 5 | 334 | 16 | 307 | 2.84e-13 | 71.2 |
MS.gene03748.t1 | MTR_2g007400 | 25.229 | 436 | 215 | 17 | 9 | 427 | 12 | 353 | 4.28e-13 | 71.2 |
MS.gene03748.t1 | MTR_5g092960 | 26.552 | 467 | 260 | 21 | 5 | 444 | 15 | 425 | 3.82e-12 | 68.6 |
MS.gene03748.t1 | MTR_4g080773 | 27.716 | 451 | 259 | 21 | 9 | 439 | 19 | 422 | 5.19e-12 | 68.2 |
MS.gene03748.t1 | MTR_4g080773 | 27.716 | 451 | 259 | 21 | 9 | 439 | 19 | 422 | 5.75e-12 | 68.2 |
MS.gene03748.t1 | MTR_8g017280 | 27.160 | 324 | 168 | 12 | 8 | 317 | 35 | 304 | 1.55e-11 | 66.2 |
MS.gene03748.t1 | MTR_8g017280 | 26.821 | 302 | 161 | 10 | 4 | 299 | 31 | 278 | 1.59e-11 | 65.5 |
MS.gene03748.t1 | MTR_3g023630 | 24.601 | 439 | 218 | 17 | 9 | 443 | 8 | 337 | 2.50e-11 | 65.5 |
MS.gene03748.t1 | MTR_5g073370 | 24.194 | 434 | 229 | 16 | 6 | 439 | 2 | 335 | 3.83e-11 | 65.1 |
MS.gene03748.t1 | MTR_7g110910 | 81.579 | 38 | 7 | 0 | 1 | 38 | 158 | 195 | 6.88e-11 | 62.0 |
MS.gene03748.t1 | MTR_7g098510 | 30.837 | 227 | 108 | 8 | 9 | 233 | 18 | 197 | 9.81e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03748.t1 | AT4G00315 | 28.821 | 458 | 244 | 19 | 9 | 443 | 2 | 400 | 7.64e-26 | 109 |
MS.gene03748.t1 | AT4G14103 | 27.845 | 413 | 217 | 14 | 9 | 396 | 8 | 364 | 7.97e-24 | 103 |
MS.gene03748.t1 | AT4G14103 | 27.845 | 413 | 217 | 14 | 9 | 396 | 8 | 364 | 7.97e-24 | 103 |
MS.gene03748.t1 | AT4G14103 | 28.180 | 401 | 207 | 14 | 9 | 384 | 8 | 352 | 2.41e-23 | 102 |
MS.gene03748.t1 | AT5G41830 | 25.385 | 520 | 258 | 17 | 3 | 457 | 7 | 461 | 4.44e-23 | 102 |
MS.gene03748.t1 | AT1G51370 | 29.581 | 453 | 230 | 16 | 7 | 443 | 17 | 396 | 5.97e-23 | 101 |
MS.gene03748.t1 | AT5G38396 | 29.238 | 407 | 210 | 16 | 9 | 387 | 2 | 358 | 6.53e-23 | 101 |
MS.gene03748.t1 | AT1G55660 | 27.293 | 458 | 251 | 19 | 9 | 443 | 53 | 451 | 1.19e-22 | 100 |
MS.gene03748.t1 | AT3G50710 | 26.767 | 467 | 251 | 14 | 9 | 455 | 2 | 397 | 1.30e-22 | 100 |
MS.gene03748.t1 | AT3G59160 | 25.629 | 437 | 236 | 14 | 9 | 400 | 13 | 405 | 3.53e-22 | 99.4 |
MS.gene03748.t1 | AT3G59190 | 27.612 | 402 | 219 | 10 | 9 | 384 | 12 | 367 | 3.62e-22 | 98.6 |
MS.gene03748.t1 | AT4G00320 | 26.995 | 426 | 239 | 12 | 3 | 401 | 7 | 387 | 4.14e-22 | 99.4 |
MS.gene03748.t1 | AT3G59190 | 27.612 | 402 | 219 | 10 | 9 | 384 | 12 | 367 | 7.44e-22 | 98.6 |
MS.gene03748.t1 | AT4G26340 | 25.843 | 445 | 253 | 14 | 9 | 443 | 2 | 379 | 9.79e-22 | 97.4 |
MS.gene03748.t1 | AT4G10400 | 25.934 | 455 | 257 | 14 | 9 | 456 | 2 | 383 | 1.78e-21 | 96.7 |
MS.gene03748.t1 | AT4G10400 | 25.934 | 455 | 257 | 14 | 9 | 456 | 2 | 383 | 1.78e-21 | 96.7 |
MS.gene03748.t1 | AT4G10400 | 25.934 | 455 | 257 | 14 | 9 | 456 | 2 | 383 | 1.78e-21 | 96.7 |
MS.gene03748.t1 | AT2G26860 | 26.984 | 441 | 254 | 13 | 9 | 439 | 2 | 384 | 3.27e-21 | 95.9 |
MS.gene03748.t1 | AT2G26860 | 26.984 | 441 | 254 | 13 | 9 | 439 | 2 | 384 | 3.27e-21 | 95.9 |
MS.gene03748.t1 | AT4G14096 | 26.781 | 407 | 214 | 13 | 8 | 391 | 7 | 352 | 3.59e-21 | 96.3 |
MS.gene03748.t1 | AT4G14096 | 26.781 | 407 | 214 | 13 | 8 | 391 | 7 | 352 | 3.59e-21 | 96.3 |
MS.gene03748.t1 | AT5G41840 | 27.778 | 414 | 218 | 13 | 9 | 385 | 14 | 383 | 7.12e-21 | 95.9 |
MS.gene03748.t1 | AT5G56400 | 28.000 | 450 | 239 | 20 | 9 | 443 | 33 | 412 | 1.23e-20 | 94.7 |
MS.gene03748.t1 | AT1G58310 | 27.426 | 474 | 247 | 18 | 9 | 432 | 8 | 434 | 1.51e-20 | 94.7 |
MS.gene03748.t1 | AT1G51370 | 29.330 | 433 | 218 | 15 | 7 | 424 | 17 | 376 | 2.80e-20 | 93.2 |
MS.gene03748.t1 | AT5G56380 | 25.664 | 452 | 255 | 12 | 9 | 439 | 2 | 393 | 3.85e-20 | 92.8 |
MS.gene03748.t1 | AT5G56380 | 25.664 | 452 | 255 | 12 | 9 | 439 | 2 | 393 | 3.85e-20 | 92.8 |
MS.gene03748.t1 | AT5G56440 | 26.608 | 451 | 252 | 14 | 9 | 443 | 2 | 389 | 3.90e-20 | 92.8 |
MS.gene03748.t1 | AT4G13960 | 27.047 | 403 | 217 | 11 | 9 | 387 | 2 | 351 | 7.47e-20 | 92.4 |
MS.gene03748.t1 | AT4G13960 | 27.047 | 403 | 217 | 11 | 9 | 387 | 2 | 351 | 7.47e-20 | 92.4 |
MS.gene03748.t1 | AT3G03030 | 27.027 | 407 | 220 | 11 | 9 | 385 | 2 | 361 | 8.24e-20 | 92.0 |
MS.gene03748.t1 | AT3G59170 | 27.335 | 439 | 241 | 17 | 9 | 406 | 7 | 408 | 2.02e-19 | 90.9 |
MS.gene03748.t1 | AT5G53840 | 28.228 | 457 | 234 | 19 | 7 | 443 | 16 | 398 | 9.96e-19 | 88.6 |
MS.gene03748.t1 | AT1G06630 | 29.231 | 390 | 218 | 16 | 8 | 387 | 11 | 352 | 2.84e-18 | 87.0 |
MS.gene03748.t1 | AT1G06630 | 29.231 | 390 | 218 | 16 | 8 | 387 | 11 | 352 | 2.84e-18 | 87.0 |
MS.gene03748.t1 | AT1G06630 | 29.231 | 390 | 218 | 16 | 8 | 387 | 11 | 352 | 2.84e-18 | 87.0 |
MS.gene03748.t1 | AT1G06630 | 29.231 | 390 | 218 | 16 | 8 | 387 | 11 | 352 | 2.84e-18 | 87.0 |
MS.gene03748.t1 | AT1G06630 | 29.231 | 390 | 218 | 16 | 8 | 387 | 11 | 352 | 3.18e-18 | 86.3 |
MS.gene03748.t1 | AT1G06630 | 29.231 | 390 | 218 | 16 | 8 | 387 | 11 | 352 | 3.18e-18 | 86.3 |
MS.gene03748.t1 | AT3G58920 | 27.014 | 422 | 224 | 15 | 9 | 395 | 2 | 374 | 3.94e-18 | 87.0 |
MS.gene03748.t1 | AT1G06630 | 29.231 | 390 | 218 | 16 | 8 | 387 | 20 | 361 | 4.02e-18 | 86.7 |
MS.gene03748.t1 | AT4G26350 | 24.062 | 453 | 260 | 14 | 9 | 443 | 2 | 388 | 4.21e-18 | 86.7 |
MS.gene03748.t1 | AT1G06630 | 29.231 | 390 | 218 | 16 | 8 | 387 | 11 | 352 | 5.38e-18 | 86.7 |
MS.gene03748.t1 | AT1G32375 | 26.009 | 446 | 246 | 17 | 9 | 439 | 2 | 378 | 6.19e-18 | 86.3 |
MS.gene03748.t1 | AT1G32375 | 26.009 | 446 | 246 | 17 | 9 | 439 | 2 | 378 | 6.19e-18 | 86.3 |
MS.gene03748.t1 | AT3G59210 | 27.137 | 468 | 265 | 14 | 5 | 448 | 3 | 418 | 6.39e-18 | 86.7 |
MS.gene03748.t1 | AT3G59210 | 27.137 | 468 | 265 | 14 | 5 | 448 | 3 | 418 | 6.39e-18 | 86.7 |
MS.gene03748.t1 | AT3G59210 | 27.137 | 468 | 265 | 14 | 5 | 448 | 3 | 418 | 6.39e-18 | 86.7 |
MS.gene03748.t1 | AT3G59210 | 27.137 | 468 | 265 | 14 | 5 | 448 | 3 | 418 | 6.39e-18 | 86.7 |
MS.gene03748.t1 | AT3G59210 | 27.137 | 468 | 265 | 14 | 5 | 448 | 3 | 418 | 6.39e-18 | 86.7 |
MS.gene03748.t1 | AT1G69630 | 27.543 | 403 | 224 | 14 | 2 | 387 | 11 | 362 | 8.55e-18 | 85.9 |
MS.gene03748.t1 | AT2G42720 | 28.125 | 416 | 192 | 18 | 9 | 387 | 2 | 347 | 3.88e-17 | 84.0 |
MS.gene03748.t1 | AT1G55660 | 27.666 | 347 | 179 | 14 | 9 | 334 | 53 | 348 | 4.20e-17 | 83.2 |
MS.gene03748.t1 | AT5G38590 | 25.901 | 444 | 250 | 16 | 9 | 443 | 2 | 375 | 5.49e-17 | 83.2 |
MS.gene03748.t1 | AT1G51370 | 29.517 | 393 | 189 | 15 | 7 | 384 | 17 | 336 | 7.67e-17 | 82.0 |
MS.gene03748.t1 | AT4G22280 | 27.913 | 412 | 220 | 12 | 9 | 406 | 2 | 350 | 1.10e-16 | 82.4 |
MS.gene03748.t1 | AT3G59200 | 25.446 | 448 | 239 | 15 | 8 | 419 | 6 | 394 | 1.20e-16 | 82.8 |
MS.gene03748.t1 | AT3G03030 | 27.654 | 358 | 186 | 10 | 9 | 336 | 2 | 316 | 1.23e-16 | 81.3 |
MS.gene03748.t1 | AT5G56410 | 27.093 | 454 | 263 | 21 | 9 | 445 | 2 | 404 | 2.12e-16 | 82.0 |
MS.gene03748.t1 | AT1G52650 | 26.716 | 408 | 213 | 15 | 9 | 387 | 2 | 352 | 2.29e-16 | 81.6 |
MS.gene03748.t1 | AT1G78760 | 26.949 | 449 | 232 | 19 | 7 | 427 | 14 | 394 | 2.34e-16 | 81.6 |
MS.gene03748.t1 | AT3G58860 | 26.343 | 391 | 223 | 12 | 6 | 384 | 4 | 341 | 3.92e-16 | 80.9 |
MS.gene03748.t1 | AT4G13965 | 27.964 | 447 | 237 | 18 | 9 | 443 | 10 | 383 | 6.39e-16 | 80.1 |
MS.gene03748.t1 | AT2G26030 | 25.431 | 464 | 257 | 19 | 9 | 444 | 4 | 406 | 1.05e-15 | 79.3 |
MS.gene03748.t1 | AT4G22280 | 28.753 | 393 | 203 | 13 | 9 | 387 | 2 | 331 | 1.23e-15 | 78.2 |
MS.gene03748.t1 | AT3G59180 | 28.939 | 311 | 177 | 11 | 104 | 387 | 33 | 326 | 3.07e-15 | 78.2 |
MS.gene03748.t1 | AT2G26030 | 25.325 | 462 | 255 | 19 | 9 | 444 | 4 | 401 | 3.80e-15 | 77.8 |
MS.gene03748.t1 | AT2G26030 | 25.325 | 462 | 255 | 19 | 9 | 444 | 4 | 401 | 3.80e-15 | 77.8 |
MS.gene03748.t1 | AT5G38392 | 32.787 | 244 | 106 | 10 | 9 | 239 | 2 | 200 | 4.59e-15 | 74.7 |
MS.gene03748.t1 | AT3G26930 | 26.846 | 447 | 239 | 17 | 8 | 439 | 20 | 393 | 4.72e-15 | 77.4 |
MS.gene03748.t1 | AT5G56370 | 26.697 | 442 | 238 | 18 | 9 | 439 | 2 | 368 | 4.79e-15 | 77.4 |
MS.gene03748.t1 | AT5G56370 | 26.697 | 442 | 238 | 18 | 9 | 439 | 2 | 368 | 4.79e-15 | 77.4 |
MS.gene03748.t1 | AT4G15060 | 26.022 | 465 | 231 | 19 | 6 | 435 | 23 | 409 | 6.90e-15 | 77.0 |
MS.gene03748.t1 | AT5G56690 | 28.507 | 442 | 230 | 23 | 11 | 432 | 4 | 379 | 1.41e-14 | 75.9 |
MS.gene03748.t1 | AT3G59240 | 26.515 | 396 | 224 | 12 | 9 | 387 | 8 | 353 | 2.81e-14 | 75.5 |
MS.gene03748.t1 | AT2G29930 | 27.384 | 409 | 195 | 19 | 9 | 387 | 12 | 348 | 2.98e-14 | 75.1 |
MS.gene03748.t1 | AT2G29930 | 27.384 | 409 | 195 | 19 | 9 | 387 | 12 | 348 | 2.98e-14 | 75.1 |
MS.gene03748.t1 | AT3G49030 | 25.926 | 432 | 240 | 16 | 7 | 427 | 19 | 381 | 4.87e-14 | 74.3 |
MS.gene03748.t1 | AT3G26930 | 28.475 | 295 | 170 | 12 | 159 | 439 | 81 | 348 | 5.16e-14 | 73.9 |
MS.gene03748.t1 | AT4G13985 | 26.434 | 401 | 238 | 13 | 4 | 390 | 14 | 371 | 5.93e-14 | 74.3 |
MS.gene03748.t1 | AT2G42730 | 26.872 | 454 | 255 | 18 | 9 | 438 | 5 | 405 | 7.71e-14 | 73.9 |
MS.gene03748.t1 | AT1G66310 | 26.471 | 408 | 235 | 15 | 4 | 399 | 14 | 368 | 8.92e-14 | 73.6 |
MS.gene03748.t1 | AT3G59250 | 26.765 | 340 | 204 | 12 | 124 | 445 | 57 | 369 | 1.54e-13 | 72.8 |
MS.gene03748.t1 | AT1G06630 | 29.762 | 336 | 179 | 15 | 9 | 334 | 12 | 300 | 1.54e-13 | 71.6 |
MS.gene03748.t1 | AT5G56700 | 29.970 | 337 | 197 | 16 | 115 | 439 | 29 | 338 | 2.46e-13 | 71.6 |
MS.gene03748.t1 | AT1G13780 | 25.612 | 449 | 276 | 16 | 9 | 443 | 10 | 414 | 2.61e-13 | 72.0 |
MS.gene03748.t1 | AT3G44060 | 27.764 | 407 | 216 | 21 | 14 | 400 | 4 | 352 | 3.60e-13 | 71.6 |
MS.gene03748.t1 | AT1G78750 | 26.730 | 419 | 239 | 16 | 2 | 401 | 11 | 380 | 3.68e-13 | 71.6 |
MS.gene03748.t1 | AT1G78750 | 26.730 | 419 | 239 | 16 | 2 | 401 | 11 | 380 | 3.68e-13 | 71.6 |
MS.gene03748.t1 | AT5G25860 | 26.515 | 396 | 233 | 14 | 9 | 387 | 12 | 366 | 8.18e-13 | 70.5 |
MS.gene03748.t1 | AT1G05080 | 27.313 | 454 | 247 | 16 | 8 | 443 | 12 | 400 | 1.16e-12 | 70.1 |
MS.gene03748.t1 | AT5G53635 | 27.473 | 455 | 214 | 25 | 11 | 425 | 2 | 380 | 1.74e-12 | 69.3 |
MS.gene03748.t1 | AT5G18770 | 25.330 | 454 | 263 | 15 | 9 | 443 | 24 | 420 | 2.76e-12 | 68.9 |
MS.gene03748.t1 | AT5G56820 | 26.415 | 371 | 200 | 14 | 120 | 461 | 66 | 392 | 3.80e-12 | 68.6 |
MS.gene03748.t1 | AT3G59150 | 28.532 | 361 | 172 | 16 | 9 | 338 | 13 | 318 | 4.32e-12 | 68.6 |
MS.gene03748.t1 | AT3G60040 | 24.764 | 424 | 272 | 11 | 9 | 428 | 232 | 612 | 7.53e-12 | 68.2 |
MS.gene03748.t1 | AT3G60040 | 24.764 | 424 | 272 | 11 | 9 | 428 | 230 | 610 | 8.50e-12 | 67.8 |
MS.gene03748.t1 | AT2G29930 | 33.061 | 245 | 110 | 15 | 166 | 387 | 15 | 228 | 1.02e-11 | 66.6 |
MS.gene03748.t1 | AT3G60040 | 24.764 | 424 | 272 | 11 | 9 | 428 | 13 | 393 | 1.23e-11 | 67.4 |
MS.gene03748.t1 | AT5G60610 | 29.375 | 320 | 183 | 14 | 135 | 439 | 83 | 374 | 1.32e-11 | 66.6 |
MS.gene03748.t1 | AT5G60610 | 29.375 | 320 | 183 | 14 | 135 | 439 | 83 | 374 | 1.32e-11 | 66.6 |
MS.gene03748.t1 | AT3G60040 | 24.764 | 424 | 272 | 11 | 9 | 428 | 232 | 612 | 1.40e-11 | 67.4 |
MS.gene03748.t1 | AT3G60040 | 24.764 | 424 | 272 | 11 | 9 | 428 | 233 | 613 | 1.51e-11 | 67.4 |
MS.gene03748.t1 | AT5G35995 | 24.500 | 400 | 222 | 15 | 8 | 387 | 4 | 343 | 3.77e-11 | 65.5 |
MS.gene03748.t1 | AT5G35995 | 24.500 | 400 | 222 | 15 | 8 | 387 | 4 | 343 | 3.77e-11 | 65.5 |
MS.gene03748.t1 | AT3G56780 | 23.566 | 488 | 245 | 15 | 11 | 439 | 9 | 427 | 5.61e-11 | 65.1 |
Find 91 sgRNAs with CRISPR-Local
Find 131 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTGCAAACTCATACTTTCT+AGG | 0.189881 | 4.3:-45063144 | None:intergenic |
CTCGTTACATTTGAATTTAA+AGG | 0.204847 | 4.3:+45063947 | MS.gene03748:CDS |
ACATGTTCTATAACACTCTT+TGG | 0.268393 | 4.3:-45062365 | None:intergenic |
ACTGCAAGATCCTTAAGTTT+TGG | 0.282824 | 4.3:-45063512 | None:intergenic |
TAATTCAATTGAAGATCATT+TGG | 0.291569 | 4.3:+45064468 | MS.gene03748:CDS |
TCACAGTTTGTTATATTTAT+CGG | 0.293701 | 4.3:+45063433 | MS.gene03748:CDS |
TATAACACTCTTTGGTTGAT+AGG | 0.294346 | 4.3:-45062357 | None:intergenic |
GCAGACTGACTCCCATCTTT+TGG | 0.296189 | 4.3:-45062395 | None:intergenic |
AGTTTCCAACCTCCTTTCTT+CGG | 0.314970 | 4.3:-45063877 | None:intergenic |
ACTTAAGGATCTTGCAGTTA+AGG | 0.333977 | 4.3:+45063517 | MS.gene03748:CDS |
GCTTTCCATTTGTAAGCTTC+CGG | 0.343112 | 4.3:+45063191 | MS.gene03748:CDS |
GTTTCCAACCTCCTTTCTTC+GGG | 0.346723 | 4.3:-45063876 | None:intergenic |
TCTATCTGGTTGTCCTCGTC+TGG | 0.383558 | 4.3:+45062951 | MS.gene03748:CDS |
ACTCGTTGTCTTAAAATTGC+GGG | 0.384586 | 4.3:+45062801 | MS.gene03748:CDS |
TGTGATGTATTCTATCTTTG+AGG | 0.387279 | 4.3:+45062900 | MS.gene03748:CDS |
CGAAAGCAAGCTGTAAAGAT+AGG | 0.388871 | 4.3:-45062486 | None:intergenic |
AATTCAATTGAAGATCATTT+GGG | 0.401511 | 4.3:+45064469 | MS.gene03748:CDS |
ACAAATCCAGGTCAAGTTCC+TGG | 0.406926 | 4.3:-45062729 | None:intergenic |
ACTTTCTAATGTCAAATCAT+TGG | 0.410912 | 4.3:+45063245 | MS.gene03748:CDS |
AAGTAGGCATAAATAAATAA+AGG | 0.417351 | 4.3:-45063044 | None:intergenic |
AAAGTGAAGGTTGGGAATCT+TGG | 0.417455 | 4.3:-45062419 | None:intergenic |
GCAGAATGCTCCAAAACTTA+AGG | 0.417940 | 4.3:+45063502 | MS.gene03748:CDS |
GGTAATTGAAAGTGAAGGTT+GGG | 0.443422 | 4.3:-45062427 | None:intergenic |
AGATCATTTGGGTGCCTTCA+AGG | 0.446325 | 4.3:+45064480 | MS.gene03748:CDS |
TAGAATACATCACAGTTTCA+TGG | 0.447817 | 4.3:-45062891 | None:intergenic |
AAGCCTAGCTCGATCAAGAT+TGG | 0.452512 | 4.3:-45063172 | None:intergenic |
TAGAAAGAACTTCGAGTGAC+GGG | 0.453462 | 4.3:-45063101 | None:intergenic |
ATTTCTTCTTTCGATATCAC+AGG | 0.458999 | 4.3:-45062463 | None:intergenic |
CTAACGTTTGATAGTGAGAA+AGG | 0.464525 | 4.3:+45062535 | MS.gene03748:CDS |
CATGTGTTCTATCCAAAAGA+TGG | 0.467948 | 4.3:+45062383 | MS.gene03748:CDS |
TTTCATGCAGAAACAAATCC+AGG | 0.472087 | 4.3:-45062741 | None:intergenic |
CATCAAGTGGCTGGTATGGC+TGG | 0.480337 | 4.3:-45062561 | None:intergenic |
TCAAATCAATTCCCGAAGAA+AGG | 0.482837 | 4.3:+45063865 | MS.gene03748:CDS |
GGTCTTCGCTGAATCCTTGA+AGG | 0.485061 | 4.3:-45064494 | None:intergenic |
AAATTCAAATGTAACGAGAC+TGG | 0.485332 | 4.3:-45063942 | None:intergenic |
GTATACAAATTGTTAAAATC+CGG | 0.494166 | 4.3:-45063210 | None:intergenic |
CAAGGTCCAGGAACTTGACC+TGG | 0.494419 | 4.3:+45062723 | MS.gene03748:CDS |
GGCATTAGATCTCAAGGTCC+AGG | 0.496808 | 4.3:+45062711 | MS.gene03748:CDS |
ATCACAGGGTCTGAAATCTC+TGG | 0.502995 | 4.3:-45062448 | None:intergenic |
TGTACACATGTGGGTTTCAA+AGG | 0.503354 | 4.3:+45062582 | MS.gene03748:CDS |
AAAATCCGGAAGCTTACAAA+TGG | 0.505532 | 4.3:-45063196 | None:intergenic |
GGAGGTTGGAAACTCGAGTT+GGG | 0.509671 | 4.3:+45063886 | MS.gene03748:CDS |
GTGACTCACACGTGGAAAGC+CGG | 0.517166 | 4.3:-45062780 | None:intergenic |
CACTCGTTGTCTTAAAATTG+CGG | 0.517531 | 4.3:+45062800 | MS.gene03748:CDS |
TGTACATCAAGTGGCTGGTA+TGG | 0.523834 | 4.3:-45062565 | None:intergenic |
TGTCCAATCTTGATCGAGCT+AGG | 0.540794 | 4.3:+45063169 | MS.gene03748:CDS |
TTCAAAGGCATTAGATCTCA+AGG | 0.542872 | 4.3:+45062705 | MS.gene03748:CDS |
CAACACGTAATAACAGAAGT+AGG | 0.549259 | 4.3:-45063060 | None:intergenic |
TGGTAATTGAAAGTGAAGGT+TGG | 0.551378 | 4.3:-45062428 | None:intergenic |
TTAACAATTTGTATACACTC+TGG | 0.552358 | 4.3:+45063217 | MS.gene03748:CDS |
AATGTCAAATCATTGGCTCT+CGG | 0.552626 | 4.3:+45063252 | MS.gene03748:CDS |
CCGAAAATATAAGAAAACTT+AGG | 0.553012 | 4.3:+45062635 | MS.gene03748:CDS |
TGTTATGCAGTTTCTCAGCA+TGG | 0.553413 | 4.3:+45063376 | MS.gene03748:intron |
TAAGTGAAAAGAGATGTTGA+TGG | 0.554261 | 4.3:-45063007 | None:intergenic |
AGCCACATGATGTGCACATG+TGG | 0.563390 | 4.3:+45062680 | MS.gene03748:CDS |
ATGTGTTCTATCCAAAAGAT+GGG | 0.563690 | 4.3:+45062384 | MS.gene03748:CDS |
GACGGGGCATTAATTTGTAG+TGG | 0.566180 | 4.3:-45063084 | None:intergenic |
TCAAGACATAGAAACTGAGT+TGG | 0.567178 | 4.3:+45063973 | MS.gene03748:CDS |
CTTAGGCTTCATAGTGACAA+AGG | 0.569497 | 4.3:+45062652 | MS.gene03748:CDS |
AGGAGGTTGGAAACTCGAGT+TGG | 0.571978 | 4.3:+45063885 | MS.gene03748:CDS |
AAGTGAAAAGAGATGTTGAT+GGG | 0.577961 | 4.3:-45063006 | None:intergenic |
ATCTGGTTGTCCTCGTCTGG+AGG | 0.578131 | 4.3:+45062954 | MS.gene03748:CDS |
CGGTAAATATACATGAAAAG+AGG | 0.581610 | 4.3:-45062848 | None:intergenic |
TGTGCACATGTGGGTTTCAA+AGG | 0.585269 | 4.3:+45062690 | MS.gene03748:CDS |
GGTGGAGCCATCAGTGACTC+CGG | 0.588696 | 4.3:+45063907 | MS.gene03748:CDS |
AATTCCCGAAGAAAGGAGGT+TGG | 0.591474 | 4.3:+45063872 | MS.gene03748:CDS |
CTCGTTGTCTTAAAATTGCG+GGG | 0.596906 | 4.3:+45062802 | MS.gene03748:CDS |
AAATATCTGAGAGTTGCAGT+TGG | 0.597797 | 4.3:+45063459 | MS.gene03748:CDS |
AATTTGTATACACTCTGGAA+AGG | 0.599787 | 4.3:+45063222 | MS.gene03748:CDS |
AGACTGGTTGTAAGACATGC+CGG | 0.603083 | 4.3:-45063926 | None:intergenic |
GATGTTGATGGGTATTCGAA+AGG | 0.603601 | 4.3:-45062995 | None:intergenic |
AATCAATTCCCGAAGAAAGG+AGG | 0.603702 | 4.3:+45063868 | MS.gene03748:CDS |
ATAGAAAGAACTTCGAGTGA+CGG | 0.607597 | 4.3:-45063102 | None:intergenic |
AGACATGCCGGAGTCACTGA+TGG | 0.608044 | 4.3:-45063914 | None:intergenic |
ACATGTGTACATCAAGTGGC+TGG | 0.611487 | 4.3:-45062570 | None:intergenic |
GCCACTTGATGTACACATGT+GGG | 0.611613 | 4.3:+45062573 | MS.gene03748:CDS |
TGAAAAGAGGAATTGAGTGT+TGG | 0.612345 | 4.3:-45062835 | None:intergenic |
TTTCTTCTTTCGATATCACA+GGG | 0.620763 | 4.3:-45062462 | None:intergenic |
GGTTGGAAACTCGAGTTGGG+TGG | 0.621687 | 4.3:+45063889 | MS.gene03748:CDS |
AGCCACTTGATGTACACATG+TGG | 0.625709 | 4.3:+45062572 | MS.gene03748:CDS |
ACCCACATGTGTACATCAAG+TGG | 0.629333 | 4.3:-45062574 | None:intergenic |
AAAAGAAGTTCCTCCAGACG+AGG | 0.636459 | 4.3:-45062964 | None:intergenic |
ACCCACATGTGCACATCATG+TGG | 0.642533 | 4.3:-45062682 | None:intergenic |
AGATGAAGAATCTTTAGTGA+CGG | 0.666233 | 4.3:-45062868 | None:intergenic |
GCCACATGATGTGCACATGT+GGG | 0.673788 | 4.3:+45062681 | MS.gene03748:CDS |
AGAAAGAACTTCGAGTGACG+GGG | 0.677033 | 4.3:-45063100 | None:intergenic |
TCACACGTGGAAAGCCGGAG+CGG | 0.680905 | 4.3:-45062775 | None:intergenic |
GACAACGAGTGACTCACACG+TGG | 0.682798 | 4.3:-45062788 | None:intergenic |
TCTCTGGTAATTGAAAGTGA+AGG | 0.696256 | 4.3:-45062432 | None:intergenic |
ACTAGATTAAAAGTGTCGAG+TGG | 0.699429 | 4.3:-45064515 | None:intergenic |
TATGCAGTTTCTCAGCATGG+AGG | 0.703511 | 4.3:+45063379 | MS.gene03748:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATAAAATAGTTTAAAAGA+AGG | - | chr4.3:45063743-45063762 | None:intergenic | 10.0% |
!!! | AAAATTCTAATGATAATTTT+TGG | + | chr4.3:45063823-45063842 | MS.gene03748:intron | 10.0% |
!!! | GAATTAATTAATTTGTTTAT+CGG | - | chr4.3:45063669-45063688 | None:intergenic | 10.0% |
!!! | TATTTTTTAATGAAAAAAGT+TGG | + | chr4.3:45064176-45064195 | MS.gene03748:intron | 10.0% |
!! | AAATATAATAATCTCAAATC+TGG | + | chr4.3:45063592-45063611 | MS.gene03748:intron | 15.0% |
!! | TAAAGTATATAAACTTTGTA+TGG | - | chr4.3:45064158-45064177 | None:intergenic | 15.0% |
!! | TGATATATTGTAAATAGTTT+CGG | - | chr4.3:45063798-45063817 | None:intergenic | 15.0% |
!!! | TCTAATGATTTTATCATTTA+TGG | + | chr4.3:45064402-45064421 | MS.gene03748:intron | 15.0% |
!! | AAGTAGGCATAAATAAATAA+AGG | - | chr4.3:45063047-45063066 | None:intergenic | 20.0% |
!! | AATTCAATTGAAGATCATTT+GGG | + | chr4.3:45064469-45064488 | MS.gene03748:CDS | 20.0% |
!! | GTATACAAATTGTTAAAATC+CGG | - | chr4.3:45063213-45063232 | None:intergenic | 20.0% |
!! | TAAAAGAAGGTTAAATTGAT+AGG | - | chr4.3:45063730-45063749 | None:intergenic | 20.0% |
!! | TAATTCAATTGAAGATCATT+TGG | + | chr4.3:45064468-45064487 | MS.gene03748:CDS | 20.0% |
!! | TGTATATACTATTACATTCA+TGG | + | chr4.3:45064311-45064330 | MS.gene03748:intron | 20.0% |
!!! | AATTATTCAATATTTGCTAC+AGG | + | chr4.3:45064441-45064460 | MS.gene03748:intron | 20.0% |
!!! | CCTAAGTTTTCTTATATTTT+CGG | - | chr4.3:45062638-45062657 | None:intergenic | 20.0% |
!!! | TCACAGTTTGTTATATTTAT+CGG | + | chr4.3:45063433-45063452 | MS.gene03748:CDS | 20.0% |
! | ACTTTCTAATGTCAAATCAT+TGG | + | chr4.3:45063245-45063264 | MS.gene03748:CDS | 25.0% |
! | ATACTATTACATTCATGGTT+GGG | + | chr4.3:45064316-45064335 | MS.gene03748:intron | 25.0% |
! | CCGAAAATATAAGAAAACTT+AGG | + | chr4.3:45062635-45062654 | MS.gene03748:CDS | 25.0% |
! | CTCGTTACATTTGAATTTAA+AGG | + | chr4.3:45063947-45063966 | MS.gene03748:CDS | 25.0% |
! | TATACTATTACATTCATGGT+TGG | + | chr4.3:45064315-45064334 | MS.gene03748:intron | 25.0% |
! | TTAACAATTTGTATACACTC+TGG | + | chr4.3:45063217-45063236 | MS.gene03748:CDS | 25.0% |
AAATTCAAATGTAACGAGAC+TGG | - | chr4.3:45063945-45063964 | None:intergenic | 30.0% | |
AAGACTAAGCAAAAGATACA+TGG | + | chr4.3:45063628-45063647 | MS.gene03748:intron | 30.0% | |
AAGTGAAAAGAGATGTTGAT+GGG | - | chr4.3:45063009-45063028 | None:intergenic | 30.0% | |
AATGAGAATAGAATTGCATC+TGG | - | chr4.3:45063347-45063366 | None:intergenic | 30.0% | |
ACATGTTCTATAACACTCTT+TGG | - | chr4.3:45062368-45062387 | None:intergenic | 30.0% | |
AGATGAAGAATCTTTAGTGA+CGG | - | chr4.3:45062871-45062890 | None:intergenic | 30.0% | |
ATGAGAATAGAATTGCATCT+GGG | - | chr4.3:45063346-45063365 | None:intergenic | 30.0% | |
ATGTGTTCTATCCAAAAGAT+GGG | + | chr4.3:45062384-45062403 | MS.gene03748:CDS | 30.0% | |
ATTTCTTCTTTCGATATCAC+AGG | - | chr4.3:45062466-45062485 | None:intergenic | 30.0% | |
CGGTAAATATACATGAAAAG+AGG | - | chr4.3:45062851-45062870 | None:intergenic | 30.0% | |
GAGATATAAAGTTGTGTTGA+CGG | - | chr4.3:45064284-45064303 | None:intergenic | 30.0% | |
GTTGGCATGTTAATATTTGT+TGG | + | chr4.3:45064194-45064213 | MS.gene03748:intron | 30.0% | |
TAAGTGAAAAGAGATGTTGA+TGG | - | chr4.3:45063010-45063029 | None:intergenic | 30.0% | |
TAGAATACATCACAGTTTCA+TGG | - | chr4.3:45062894-45062913 | None:intergenic | 30.0% | |
TATAACACTCTTTGGTTGAT+AGG | - | chr4.3:45062360-45062379 | None:intergenic | 30.0% | |
TGTGATGTATTCTATCTTTG+AGG | + | chr4.3:45062900-45062919 | MS.gene03748:CDS | 30.0% | |
TTTCTTCTTTCGATATCACA+GGG | - | chr4.3:45062465-45062484 | None:intergenic | 30.0% | |
! | AATGTCTAGAACAATAAGAG+AGG | - | chr4.3:45064253-45064272 | None:intergenic | 30.0% |
! | AATTTGTATACACTCTGGAA+AGG | + | chr4.3:45063222-45063241 | MS.gene03748:CDS | 30.0% |
! | ACTCTTCTTTTCTTCAAACT+GGG | - | chr4.3:45064058-45064077 | None:intergenic | 30.0% |
! | ATTTGTTGGTATGATGTTGT+GGG | + | chr4.3:45064208-45064227 | MS.gene03748:intron | 30.0% |
! | GATCTCAATACTTTTCTATC+TGG | + | chr4.3:45062937-45062956 | MS.gene03748:CDS | 30.0% |
! | TACTCTTCTTTTCTTCAAAC+TGG | - | chr4.3:45064059-45064078 | None:intergenic | 30.0% |
! | TATTTGTTGGTATGATGTTG+TGG | + | chr4.3:45064207-45064226 | MS.gene03748:intron | 30.0% |
AAAAAATCTTATTGCCGCTC+CGG | + | chr4.3:45062761-45062780 | MS.gene03748:CDS | 35.0% | |
AAAATCCGGAAGCTTACAAA+TGG | - | chr4.3:45063199-45063218 | None:intergenic | 35.0% | |
AAATATCTGAGAGTTGCAGT+TGG | + | chr4.3:45063459-45063478 | MS.gene03748:CDS | 35.0% | |
ACTCGTTGTCTTAAAATTGC+GGG | + | chr4.3:45062801-45062820 | MS.gene03748:CDS | 35.0% | |
ACTTAAGGATCTTGCAGTTA+AGG | + | chr4.3:45063517-45063536 | MS.gene03748:CDS | 35.0% | |
AGTAGAAAAAAGTTTGCGCA+AGG | + | chr4.3:45064075-45064094 | MS.gene03748:intron | 35.0% | |
ATAGAAAGAACTTCGAGTGA+CGG | - | chr4.3:45063105-45063124 | None:intergenic | 35.0% | |
CAACACGTAATAACAGAAGT+AGG | - | chr4.3:45063063-45063082 | None:intergenic | 35.0% | |
CACTCGTTGTCTTAAAATTG+CGG | + | chr4.3:45062800-45062819 | MS.gene03748:CDS | 35.0% | |
CATGTGTTCTATCCAAAAGA+TGG | + | chr4.3:45062383-45062402 | MS.gene03748:CDS | 35.0% | |
CTTGCAAACTCATACTTTCT+AGG | - | chr4.3:45063147-45063166 | None:intergenic | 35.0% | |
GGTAATTGAAAGTGAAGGTT+GGG | - | chr4.3:45062430-45062449 | None:intergenic | 35.0% | |
GTAGAAAAAAGTTTGCGCAA+GGG | + | chr4.3:45064076-45064095 | MS.gene03748:intron | 35.0% | |
TAGAAAAAAGTTTGCGCAAG+GGG | + | chr4.3:45064077-45064096 | MS.gene03748:intron | 35.0% | |
TCAAATCAATTCCCGAAGAA+AGG | + | chr4.3:45063865-45063884 | MS.gene03748:CDS | 35.0% | |
TCAAGACATAGAAACTGAGT+TGG | + | chr4.3:45063973-45063992 | MS.gene03748:CDS | 35.0% | |
TCACTCAAGTAAGTTAGAGA+AGG | + | chr4.3:45064018-45064037 | MS.gene03748:intron | 35.0% | |
TCTCTGGTAATTGAAAGTGA+AGG | - | chr4.3:45062435-45062454 | None:intergenic | 35.0% | |
TGAAAAGAGGAATTGAGTGT+TGG | - | chr4.3:45062838-45062857 | None:intergenic | 35.0% | |
TGGTAATTGAAAGTGAAGGT+TGG | - | chr4.3:45062431-45062450 | None:intergenic | 35.0% | |
TGTAAACTTCATACCCATAC+TGG | - | chr4.3:45064121-45064140 | None:intergenic | 35.0% | |
TTTCATGCAGAAACAAATCC+AGG | - | chr4.3:45062744-45062763 | None:intergenic | 35.0% | |
TTTGTTGGTATGATGTTGTG+GGG | + | chr4.3:45064209-45064228 | MS.gene03748:intron | 35.0% | |
! | ACTGCAAGATCCTTAAGTTT+TGG | - | chr4.3:45063515-45063534 | None:intergenic | 35.0% |
! | TATAAAGTTGTGTTGACGGT+CGG | - | chr4.3:45064280-45064299 | None:intergenic | 35.0% |
!! | AATGTCAAATCATTGGCTCT+CGG | + | chr4.3:45063252-45063271 | MS.gene03748:CDS | 35.0% |
!! | CTAACGTTTGATAGTGAGAA+AGG | + | chr4.3:45062535-45062554 | MS.gene03748:CDS | 35.0% |
!! | TTATATTTTCGGTGCGTCTT+AGG | - | chr4.3:45062627-45062646 | None:intergenic | 35.0% |
!! | TTCAAAGGCATTAGATCTCA+AGG | + | chr4.3:45062705-45062724 | MS.gene03748:CDS | 35.0% |
AAAGTGAAGGTTGGGAATCT+TGG | - | chr4.3:45062422-45062441 | None:intergenic | 40.0% | |
AATCAATTCCCGAAGAAAGG+AGG | + | chr4.3:45063868-45063887 | MS.gene03748:CDS | 40.0% | |
ACTTCATACCCATACTGGTA+CGG | - | chr4.3:45064116-45064135 | None:intergenic | 40.0% | |
AGTTTCCAACCTCCTTTCTT+CGG | - | chr4.3:45063880-45063899 | None:intergenic | 40.0% | |
CGAAAGCAAGCTGTAAAGAT+AGG | - | chr4.3:45062489-45062508 | None:intergenic | 40.0% | |
CTCGTTGTCTTAAAATTGCG+GGG | + | chr4.3:45062802-45062821 | MS.gene03748:CDS | 40.0% | |
CTTAGGCTTCATAGTGACAA+AGG | + | chr4.3:45062652-45062671 | MS.gene03748:CDS | 40.0% | |
GCAGAATGCTCCAAAACTTA+AGG | + | chr4.3:45063502-45063521 | MS.gene03748:CDS | 40.0% | |
GCTTTCCATTTGTAAGCTTC+CGG | + | chr4.3:45063191-45063210 | MS.gene03748:CDS | 40.0% | |
TAGAAAGAACTTCGAGTGAC+GGG | - | chr4.3:45063104-45063123 | None:intergenic | 40.0% | |
TGCATCTGGGTGACTAAATA+TGG | - | chr4.3:45063333-45063352 | None:intergenic | 40.0% | |
TGTACACATGTGGGTTTCAA+AGG | + | chr4.3:45062582-45062601 | MS.gene03748:CDS | 40.0% | |
TGTTATGCAGTTTCTCAGCA+TGG | + | chr4.3:45063376-45063395 | MS.gene03748:intron | 40.0% | |
! | GATGTTGATGGGTATTCGAA+AGG | - | chr4.3:45062998-45063017 | None:intergenic | 40.0% |
AAAAGAAGTTCCTCCAGACG+AGG | - | chr4.3:45062967-45062986 | None:intergenic | 45.0% | |
AAGCCTAGCTCGATCAAGAT+TGG | - | chr4.3:45063175-45063194 | None:intergenic | 45.0% | |
AATTCCCGAAGAAAGGAGGT+TGG | + | chr4.3:45063872-45063891 | MS.gene03748:CDS | 45.0% | |
ACAAATCCAGGTCAAGTTCC+TGG | - | chr4.3:45062732-45062751 | None:intergenic | 45.0% | |
ACATGTGTACATCAAGTGGC+TGG | - | chr4.3:45062573-45062592 | None:intergenic | 45.0% | |
ACCCACATGTGTACATCAAG+TGG | - | chr4.3:45062577-45062596 | None:intergenic | 45.0% | |
AGAAAGAACTTCGAGTGACG+GGG | - | chr4.3:45063103-45063122 | None:intergenic | 45.0% | |
AGAAATCCTCCGTACCAGTA+TGG | + | chr4.3:45064104-45064123 | MS.gene03748:intron | 45.0% | |
AGATCATTTGGGTGCCTTCA+AGG | + | chr4.3:45064480-45064499 | MS.gene03748:CDS | 45.0% | |
AGCCACTTGATGTACACATG+TGG | + | chr4.3:45062572-45062591 | MS.gene03748:CDS | 45.0% | |
GAAATCCTCCGTACCAGTAT+GGG | + | chr4.3:45064105-45064124 | MS.gene03748:intron | 45.0% | |
GCCACTTGATGTACACATGT+GGG | + | chr4.3:45062573-45062592 | MS.gene03748:CDS | 45.0% | |
GTTTCCAACCTCCTTTCTTC+GGG | - | chr4.3:45063879-45063898 | None:intergenic | 45.0% | |
TATGCAGTTTCTCAGCATGG+AGG | + | chr4.3:45063379-45063398 | MS.gene03748:intron | 45.0% | |
TGTACATCAAGTGGCTGGTA+TGG | - | chr4.3:45062568-45062587 | None:intergenic | 45.0% | |
TGTCCAATCTTGATCGAGCT+AGG | + | chr4.3:45063169-45063188 | MS.gene03748:CDS | 45.0% | |
TGTGCACATGTGGGTTTCAA+AGG | + | chr4.3:45062690-45062709 | MS.gene03748:CDS | 45.0% | |
! | AGACTGGTTGTAAGACATGC+CGG | - | chr4.3:45063929-45063948 | None:intergenic | 45.0% |
! | ATCACAGGGTCTGAAATCTC+TGG | - | chr4.3:45062451-45062470 | None:intergenic | 45.0% |
!! | GACGGGGCATTAATTTGTAG+TGG | - | chr4.3:45063087-45063106 | None:intergenic | 45.0% |
!!! | AATATTGAATAATTAATTTT+TGG | - | chr4.3:45064435-45064454 | None:intergenic | 5.0% |
ACCCACATGTGCACATCATG+TGG | - | chr4.3:45062685-45062704 | None:intergenic | 50.0% | |
AGCCACATGATGTGCACATG+TGG | + | chr4.3:45062680-45062699 | MS.gene03748:CDS | 50.0% | |
AGGAGGTTGGAAACTCGAGT+TGG | + | chr4.3:45063885-45063904 | MS.gene03748:CDS | 50.0% | |
GCCACATGATGTGCACATGT+GGG | + | chr4.3:45062681-45062700 | MS.gene03748:CDS | 50.0% | |
GGAGGTTGGAAACTCGAGTT+GGG | + | chr4.3:45063886-45063905 | MS.gene03748:CDS | 50.0% | |
GGCATTAGATCTCAAGGTCC+AGG | + | chr4.3:45062711-45062730 | MS.gene03748:CDS | 50.0% | |
GGTCTTCGCTGAATCCTTGA+AGG | - | chr4.3:45064497-45064516 | None:intergenic | 50.0% | |
GTTGGTATGATGTTGTGGGG+TGG | + | chr4.3:45064212-45064231 | MS.gene03748:intron | 50.0% | |
TCATACCCATACTGGTACGG+AGG | - | chr4.3:45064113-45064132 | None:intergenic | 50.0% | |
TCTATCTGGTTGTCCTCGTC+TGG | + | chr4.3:45062951-45062970 | MS.gene03748:CDS | 50.0% | |
!! | GCAGACTGACTCCCATCTTT+TGG | - | chr4.3:45062398-45062417 | None:intergenic | 50.0% |
AGACATGCCGGAGTCACTGA+TGG | - | chr4.3:45063917-45063936 | None:intergenic | 55.0% | |
ATCTGGTTGTCCTCGTCTGG+AGG | + | chr4.3:45062954-45062973 | MS.gene03748:CDS | 55.0% | |
CAAGGTCCAGGAACTTGACC+TGG | + | chr4.3:45062723-45062742 | MS.gene03748:CDS | 55.0% | |
CATCAAGTGGCTGGTATGGC+TGG | - | chr4.3:45062564-45062583 | None:intergenic | 55.0% | |
GACAACGAGTGACTCACACG+TGG | - | chr4.3:45062791-45062810 | None:intergenic | 55.0% | |
GTGACTCACACGTGGAAAGC+CGG | - | chr4.3:45062783-45062802 | None:intergenic | 55.0% | |
!! | GGTTGGAAACTCGAGTTGGG+TGG | + | chr4.3:45063889-45063908 | MS.gene03748:CDS | 55.0% |
GGTGGAGCCATCAGTGACTC+CGG | + | chr4.3:45063907-45063926 | MS.gene03748:CDS | 60.0% | |
TCACACGTGGAAAGCCGGAG+CGG | - | chr4.3:45062778-45062797 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 45062283 | 45064531 | 45062283 | ID=MS.gene03748 |
chr4.3 | mRNA | 45062283 | 45064531 | 45062283 | ID=MS.gene03748.t1;Parent=MS.gene03748 |
chr4.3 | exon | 45062283 | 45063290 | 45062283 | ID=MS.gene03748.t1.exon1;Parent=MS.gene03748.t1 |
chr4.3 | CDS | 45062283 | 45063290 | 45062283 | ID=cds.MS.gene03748.t1;Parent=MS.gene03748.t1 |
chr4.3 | exon | 45063386 | 45063538 | 45063386 | ID=MS.gene03748.t1.exon2;Parent=MS.gene03748.t1 |
chr4.3 | CDS | 45063386 | 45063538 | 45063386 | ID=cds.MS.gene03748.t1;Parent=MS.gene03748.t1 |
chr4.3 | exon | 45063857 | 45064012 | 45063857 | ID=MS.gene03748.t1.exon3;Parent=MS.gene03748.t1 |
chr4.3 | CDS | 45063857 | 45064012 | 45063857 | ID=cds.MS.gene03748.t1;Parent=MS.gene03748.t1 |
chr4.3 | exon | 45064463 | 45064531 | 45064463 | ID=MS.gene03748.t1.exon4;Parent=MS.gene03748.t1 |
chr4.3 | CDS | 45064463 | 45064531 | 45064463 | ID=cds.MS.gene03748.t1;Parent=MS.gene03748.t1 |
Gene Sequence |
Protein sequence |