AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene89963


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89963.t1 MTR_4g056020 90.850 459 42 0 25 483 1 459 0.0 847
MS.gene89963.t1 MTR_4g055990 81.437 501 51 3 25 483 1 501 0.0 788
MS.gene89963.t1 MTR_4g056030 86.353 447 61 0 25 471 1 447 0.0 781
MS.gene89963.t1 MTR_4g055990 79.919 493 54 5 25 475 1 490 0.0 752
MS.gene89963.t1 MTR_4g055580 79.513 493 63 3 24 479 91 582 0.0 746
MS.gene89963.t1 MTR_4g056040 79.015 467 68 1 25 461 1 467 0.0 736
MS.gene89963.t1 MTR_4g056070 78.032 437 56 1 25 421 1 437 0.0 672
MS.gene89963.t1 MTR_1g038710 70.222 450 126 3 23 466 9 456 0.0 594
MS.gene89963.t1 MTR_1g090883 65.722 353 117 3 26 376 12 362 7.34e-150 432
MS.gene89963.t1 MTR_7g110920 56.704 358 98 5 123 461 1 320 3.10e-123 362
MS.gene89963.t1 MTR_4g056020 90.184 163 16 0 321 483 1 163 1.03e-101 301
MS.gene89963.t1 MTR_4g093690 57.299 274 108 6 23 292 8 276 4.20e-87 268
MS.gene89963.t1 MTR_1g090900 68.927 177 52 2 25 198 1 177 2.18e-70 223
MS.gene89963.t1 MTR_4g056010 90.909 99 9 0 93 191 2 100 6.94e-57 184
MS.gene89963.t1 MTR_5g084070 31.059 425 246 16 29 440 9 399 2.21e-33 131
MS.gene89963.t1 MTR_4g032730 30.599 451 236 21 33 435 15 436 3.03e-29 120
MS.gene89963.t1 MTR_5g080710 30.641 421 243 16 33 436 33 421 4.08e-29 119
MS.gene89963.t1 MTR_1g090890 61.538 91 29 2 374 461 29 116 6.98e-29 110
MS.gene89963.t1 MTR_8g062270 31.075 428 251 17 33 435 16 424 1.32e-28 118
MS.gene89963.t1 MTR_8g468810 29.867 452 262 19 28 450 20 445 1.15e-26 112
MS.gene89963.t1 MTR_8g445780 30.221 407 239 13 31 420 11 389 1.21e-26 111
MS.gene89963.t1 MTR_8g467800 31.148 427 253 16 19 424 6 412 3.95e-26 110
MS.gene89963.t1 MTR_7g056433 28.369 423 223 17 28 439 7 360 4.73e-26 109
MS.gene89963.t1 MTR_8g014260 29.099 433 257 15 30 437 13 420 7.45e-26 110
MS.gene89963.t1 MTR_3g108560 30.137 438 214 18 30 453 17 376 1.25e-25 108
MS.gene89963.t1 MTR_7g007080 28.761 452 229 21 31 462 2 380 5.73e-25 106
MS.gene89963.t1 MTR_7g007340 28.634 454 220 19 28 472 8 366 1.83e-24 105
MS.gene89963.t1 MTR_8g058970 28.481 474 274 16 28 458 14 465 2.88e-24 105
MS.gene89963.t1 MTR_2g083840 30.317 442 258 19 33 449 21 437 1.03e-23 103
MS.gene89963.t1 MTR_1g053025 26.984 441 246 17 33 457 2 382 2.50e-23 102
MS.gene89963.t1 MTR_3g107100 26.812 414 232 13 29 435 7 356 7.02e-23 100
MS.gene89963.t1 MTR_2g005990 25.934 455 235 18 33 457 6 388 8.69e-23 100
MS.gene89963.t1 MTR_1g041245 36.842 190 106 6 33 217 11 191 1.61e-22 99.8
MS.gene89963.t1 MTR_2g007400 26.464 461 241 19 33 464 12 403 6.53e-22 98.2
MS.gene89963.t1 MTR_8g468810 32.704 318 168 15 28 319 20 317 1.70e-21 95.5
MS.gene89963.t1 MTR_8g468810 32.704 318 168 15 28 319 20 317 1.96e-21 95.5
MS.gene89963.t1 MTR_8g468810 31.622 370 204 17 28 370 20 367 2.12e-21 96.3
MS.gene89963.t1 MTR_2g007450 25.000 444 247 16 24 437 7 394 2.72e-21 96.3
MS.gene89963.t1 MTR_8g468810 32.581 310 166 14 28 314 20 309 5.33e-21 94.7
MS.gene89963.t1 MTR_8g468840 27.765 425 269 15 32 435 13 420 1.11e-20 94.7
MS.gene89963.t1 MTR_3g108150 28.111 434 237 16 33 457 13 380 1.48e-20 94.0
MS.gene89963.t1 MTR_5g008950 26.253 419 212 17 35 438 1 337 2.57e-20 92.8
MS.gene89963.t1 MTR_7g098570 27.187 423 206 15 33 435 20 360 3.21e-20 93.6
MS.gene89963.t1 MTR_3g107120 27.152 453 243 15 25 458 1 385 9.12e-20 91.7
MS.gene89963.t1 MTR_2g008320 26.802 444 240 19 33 460 52 426 2.92e-19 90.5
MS.gene89963.t1 MTR_6g045333 26.329 414 233 13 33 435 61 413 3.04e-19 90.5
MS.gene89963.t1 MTR_7g060470 26.761 426 244 17 33 447 3 371 3.25e-19 89.7
MS.gene89963.t1 MTR_3g036250 25.000 444 231 14 30 457 2 359 5.50e-19 89.0
MS.gene89963.t1 MTR_8g467800 33.333 306 174 11 29 318 16 307 5.66e-19 88.6
MS.gene89963.t1 MTR_7g026500 25.000 432 234 16 32 444 13 373 1.68e-18 87.8
MS.gene89963.t1 MTR_8g062080 27.438 441 251 17 25 437 15 414 4.31e-18 87.0
MS.gene89963.t1 MTR_0492s0020 36.410 195 104 9 33 223 86 264 1.00e-17 85.9
MS.gene89963.t1 MTR_0543s0010 36.410 195 104 9 33 223 86 264 1.14e-17 85.5
MS.gene89963.t1 MTR_3g082890 26.478 423 232 16 30 435 94 454 1.36e-17 85.5
MS.gene89963.t1 MTR_8g014160 27.869 427 220 17 28 435 36 393 1.45e-17 85.1
MS.gene89963.t1 MTR_3g023630 25.304 411 226 16 33 435 8 345 2.48e-17 84.0
MS.gene89963.t1 MTR_2g008310 26.024 415 224 17 33 436 2 344 2.93e-17 84.0
MS.gene89963.t1 MTR_1g013560 24.661 442 269 11 19 435 5 407 3.20e-17 84.3
MS.gene89963.t1 MTR_7g034115 37.306 193 101 7 33 217 11 191 4.24e-17 83.2
MS.gene89963.t1 MTR_4g039440 25.428 409 233 17 33 435 34 376 6.47e-17 83.2
MS.gene89963.t1 MTR_8g062310 34.123 211 118 9 33 237 25 220 6.77e-17 83.2
MS.gene89963.t1 MTR_6g011460 25.290 431 223 15 33 445 46 395 8.02e-17 82.8
MS.gene89963.t1 MTR_3g107160 25.178 421 233 15 28 435 5 356 1.27e-16 82.0
MS.gene89963.t1 MTR_7g032380 33.158 190 113 5 33 217 11 191 1.31e-16 81.6
MS.gene89963.t1 MTR_8g058965 28.637 433 267 18 33 440 13 428 1.53e-16 82.4
MS.gene89963.t1 MTR_5g007410 25.301 415 229 17 35 435 28 375 1.56e-16 82.0
MS.gene89963.t1 MTR_5g039950 27.990 418 233 15 33 435 23 387 1.88e-16 81.6
MS.gene89963.t1 MTR_4g080787 26.471 476 271 22 18 447 1 443 2.28e-16 82.0
MS.gene89963.t1 MTR_8g469020 28.539 438 262 22 33 440 7 423 2.69e-16 81.6
MS.gene89963.t1 MTR_1g085120 25.708 459 247 22 9 448 67 450 3.04e-16 81.3
MS.gene89963.t1 MTR_7g033945 36.628 172 85 7 33 189 11 173 3.70e-16 77.0
MS.gene89963.t1 MTR_1g108820 25.243 412 232 15 33 435 8 352 4.65e-16 80.1
MS.gene89963.t1 MTR_7g098480 25.980 408 228 11 33 435 18 356 4.81e-16 80.9
MS.gene89963.t1 MTR_7g056447 34.742 213 122 8 25 230 1 203 8.98e-16 78.2
MS.gene89963.t1 MTR_1g085120 26.037 434 228 21 33 448 167 525 9.41e-16 80.1
MS.gene89963.t1 MTR_4g080773 27.312 465 284 20 18 447 1 446 1.44e-15 79.3
MS.gene89963.t1 MTR_3g108560 30.878 353 158 15 30 370 17 295 1.57e-15 77.8
MS.gene89963.t1 MTR_7g033915 34.392 189 97 8 33 217 11 176 1.61e-15 78.6
MS.gene89963.t1 MTR_4g080773 27.312 465 284 20 18 447 1 446 1.75e-15 79.3
MS.gene89963.t1 MTR_1g014450 24.609 447 237 17 28 433 11 398 2.31e-15 78.6
MS.gene89963.t1 MTR_3g109982 26.190 462 282 14 33 451 13 458 3.15e-15 79.0
MS.gene89963.t1 MTR_3g040700 23.981 417 232 12 33 443 43 380 3.42e-15 77.8
MS.gene89963.t1 MTR_8g085430 33.663 202 103 8 33 217 11 198 3.50e-15 77.0
MS.gene89963.t1 MTR_2g007500 35.106 188 103 6 33 217 14 185 4.09e-15 77.0
MS.gene89963.t1 MTR_2g091145 26.667 435 248 17 29 435 17 408 4.53e-15 77.8
MS.gene89963.t1 MTR_2g036470 26.424 439 229 21 33 450 14 379 5.16e-15 77.0
MS.gene89963.t1 MTR_4g098590 25.829 422 224 16 35 435 1 354 7.39e-15 76.6
MS.gene89963.t1 MTR_1g013560 31.163 215 127 5 19 221 5 210 9.84e-15 75.9
MS.gene89963.t1 MTR_6g022360 31.068 206 116 7 18 217 26 211 1.04e-14 76.3
MS.gene89963.t1 MTR_7g088260 24.439 446 246 17 28 457 86 456 1.58e-14 75.9
MS.gene89963.t1 MTR_5g092960 25.745 470 279 21 14 443 1 440 1.95e-14 75.9
MS.gene89963.t1 MTR_2g047848 25.701 428 260 17 28 433 2 393 2.43e-14 75.1
MS.gene89963.t1 MTR_3g048290 26.058 449 279 16 29 447 19 444 2.67e-14 75.5
MS.gene89963.t1 MTR_4g080590 24.944 445 289 18 33 453 23 446 4.58e-14 74.7
MS.gene89963.t1 MTR_7g115270 34.010 197 110 9 33 217 12 200 6.05e-14 73.9
MS.gene89963.t1 MTR_7g033990 29.000 200 123 5 33 223 11 200 1.10e-13 73.2
MS.gene89963.t1 MTR_7g055943 32.381 210 118 9 27 228 34 227 1.28e-13 73.2
MS.gene89963.t1 MTR_8g062010 34.158 202 111 8 25 215 1 191 1.28e-13 73.2
MS.gene89963.t1 MTR_8g070950 32.653 196 114 5 30 217 12 197 1.51e-13 72.8
MS.gene89963.t1 MTR_1g013840 27.252 433 244 17 31 435 54 443 1.53e-13 73.2
MS.gene89963.t1 MTR_5g058100 25.114 438 240 16 33 457 9 371 1.62e-13 72.4
MS.gene89963.t1 MTR_5g045510 32.642 193 109 9 33 217 12 191 2.05e-13 72.0
MS.gene89963.t1 MTR_7g098510 32.086 187 118 3 33 217 18 197 2.93e-13 71.6
MS.gene89963.t1 MTR_3g082890 24.454 458 234 16 30 435 14 411 3.35e-13 71.6
MS.gene89963.t1 MTR_1g085120 31.674 221 125 12 9 217 154 360 3.45e-13 72.0
MS.gene89963.t1 MTR_7g034110 30.319 188 123 4 33 217 11 193 3.69e-13 71.2
MS.gene89963.t1 MTR_0009s0080 24.760 416 230 15 35 435 20 367 3.70e-13 71.6
MS.gene89963.t1 MTR_1g107385 25.462 487 262 21 1 457 1 416 4.90e-13 71.2
MS.gene89963.t1 MTR_2g047858 25.734 443 242 15 29 435 111 502 4.99e-13 71.6
MS.gene89963.t1 MTR_5g040850 24.545 440 261 15 28 442 2 395 5.48e-13 71.2
MS.gene89963.t1 MTR_5g073420 30.256 195 116 5 33 217 11 195 7.20e-13 70.5
MS.gene89963.t1 MTR_1g066830 31.771 192 113 9 33 217 8 188 1.27e-12 69.7
MS.gene89963.t1 MTR_4g050250 33.019 212 109 9 33 217 21 226 1.29e-12 70.1
MS.gene89963.t1 MTR_1g021825 23.932 468 288 14 19 462 3 426 1.56e-12 69.7
MS.gene89963.t1 MTR_1g108820 32.632 190 112 7 33 218 8 185 1.66e-12 68.9
MS.gene89963.t1 MTR_1g021825 23.950 476 278 14 19 462 74 497 2.24e-12 69.3
MS.gene89963.t1 MTR_4g050930 27.429 350 226 11 10 346 8 342 3.81e-12 68.2
MS.gene89963.t1 MTR_6g022500 32.821 195 108 10 33 217 101 282 4.81e-12 68.2
MS.gene89963.t1 MTR_4g050930 27.429 350 226 11 10 346 8 342 5.78e-12 68.2
MS.gene89963.t1 MTR_7g110910 80.000 40 8 0 23 62 156 195 7.66e-12 64.7
MS.gene89963.t1 MTR_7g075820 32.258 217 117 9 33 225 6 216 9.82e-12 67.0
MS.gene89963.t1 MTR_3g114200 31.081 148 89 4 31 170 17 159 1.03e-11 63.5
MS.gene89963.t1 MTR_1g115245 32.353 170 101 4 28 187 21 186 1.69e-11 65.5
MS.gene89963.t1 MTR_4g047950 32.317 164 105 4 29 187 9 171 2.27e-11 65.9
MS.gene89963.t1 MTR_3g099900 34.320 169 92 6 30 187 15 175 4.66e-11 65.1
MS.gene89963.t1 MTR_2g082800 34.783 184 102 8 14 187 6 181 5.51e-11 64.7
MS.gene89963.t1 MTR_5g083890 26.087 460 223 21 33 451 6 389 6.01e-11 65.1
MS.gene89963.t1 MTR_7g023310 22.343 461 306 18 28 461 21 456 6.19e-11 64.7
MS.gene89963.t1 MTR_5g061680 33.333 195 108 10 33 217 11 193 8.36e-11 63.5
MS.gene89963.t1 MTR_5g058350 30.811 185 98 6 33 217 8 162 9.30e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89963.t1 AT4G00315 30.474 443 256 18 33 446 2 421 1.48e-33 132
MS.gene89963.t1 AT4G14103 32.275 378 205 13 33 380 8 364 4.24e-32 127
MS.gene89963.t1 AT4G14103 32.275 378 205 13 33 380 8 364 4.24e-32 127
MS.gene89963.t1 AT4G14103 32.888 374 199 14 33 376 8 359 6.11e-32 127
MS.gene89963.t1 AT1G55660 29.345 443 261 18 33 446 53 472 1.34e-31 127
MS.gene89963.t1 AT4G10400 28.246 439 263 15 33 457 2 402 3.91e-29 119
MS.gene89963.t1 AT4G10400 28.246 439 263 15 33 457 2 402 3.91e-29 119
MS.gene89963.t1 AT4G10400 28.246 439 263 15 33 457 2 402 3.91e-29 119
MS.gene89963.t1 AT1G51370 29.604 429 255 15 31 444 17 413 2.35e-28 117
MS.gene89963.t1 AT4G26340 28.297 417 252 14 33 434 2 386 4.06e-28 116
MS.gene89963.t1 AT4G14096 30.532 357 208 12 33 368 8 345 5.05e-28 116
MS.gene89963.t1 AT4G14096 30.532 357 208 12 33 368 8 345 5.05e-28 116
MS.gene89963.t1 AT3G50710 28.767 438 257 16 33 448 2 406 8.07e-28 115
MS.gene89963.t1 AT2G26860 30.193 414 259 13 33 435 2 396 8.56e-28 115
MS.gene89963.t1 AT2G26860 30.193 414 259 13 33 435 2 396 8.56e-28 115
MS.gene89963.t1 AT3G59190 30.376 372 207 13 33 368 12 367 2.48e-27 113
MS.gene89963.t1 AT3G59190 30.376 372 207 13 33 368 12 367 7.54e-27 114
MS.gene89963.t1 AT3G59230 28.634 454 260 13 33 440 12 447 6.01e-26 110
MS.gene89963.t1 AT5G56380 27.252 444 273 15 33 451 2 420 6.55e-26 110
MS.gene89963.t1 AT5G56380 27.252 444 273 15 33 451 2 420 6.55e-26 110
MS.gene89963.t1 AT4G00320 28.680 394 233 12 27 385 7 387 7.68e-25 107
MS.gene89963.t1 AT5G38590 27.546 432 266 14 33 449 2 401 9.74e-25 106
MS.gene89963.t1 AT1G55660 29.762 336 188 13 33 345 53 363 1.14e-24 105
MS.gene89963.t1 AT5G41830 29.075 454 249 15 27 440 7 427 1.45e-24 107
MS.gene89963.t1 AT5G62970 28.667 450 239 21 33 435 2 416 1.94e-24 105
MS.gene89963.t1 AT3G59210 31.978 369 209 13 29 369 3 357 2.17e-24 106
MS.gene89963.t1 AT3G59210 31.978 369 209 13 29 369 3 357 2.17e-24 106
MS.gene89963.t1 AT3G59210 31.978 369 209 13 29 369 3 357 2.17e-24 106
MS.gene89963.t1 AT3G59210 31.978 369 209 13 29 369 3 357 2.17e-24 106
MS.gene89963.t1 AT3G59210 31.978 369 209 13 29 369 3 357 2.17e-24 106
MS.gene89963.t1 AT4G22280 32.970 367 211 15 33 386 2 346 2.53e-24 105
MS.gene89963.t1 AT3G59160 26.764 411 224 12 33 384 13 405 2.92e-24 105
MS.gene89963.t1 AT5G38396 30.645 372 208 13 33 370 2 357 4.80e-24 105
MS.gene89963.t1 AT4G22280 33.618 351 198 15 33 370 2 330 5.49e-24 102
MS.gene89963.t1 AT3G59200 27.443 481 274 20 32 460 6 463 7.76e-24 104
MS.gene89963.t1 AT1G51370 30.102 392 228 14 31 408 17 376 1.05e-23 103
MS.gene89963.t1 AT5G56440 26.651 424 262 13 33 435 2 397 1.54e-23 103
MS.gene89963.t1 AT1G58310 30.570 386 201 13 33 369 8 375 2.33e-23 103
MS.gene89963.t1 AT5G56370 28.736 435 270 17 33 459 2 404 2.79e-23 102
MS.gene89963.t1 AT5G56370 28.736 435 270 17 33 459 2 404 2.79e-23 102
MS.gene89963.t1 AT3G03040 29.189 370 212 8 33 368 2 355 6.13e-23 101
MS.gene89963.t1 AT5G56400 28.333 420 252 17 33 435 33 420 8.55e-23 101
MS.gene89963.t1 AT5G41840 30.311 386 204 13 33 369 14 383 9.67e-23 101
MS.gene89963.t1 AT4G26350 26.512 430 263 15 33 440 2 400 9.84e-23 100
MS.gene89963.t1 AT3G03030 28.610 374 216 10 33 369 2 361 9.96e-23 101
MS.gene89963.t1 AT4G13965 28.472 432 234 19 33 437 10 393 1.09e-22 100
MS.gene89963.t1 AT3G59200 29.815 379 205 16 32 370 6 363 1.41e-22 99.4
MS.gene89963.t1 AT3G58860 29.248 359 217 12 30 370 4 343 1.45e-22 100
MS.gene89963.t1 AT5G60610 29.833 419 244 18 33 435 2 386 1.63e-22 99.8
MS.gene89963.t1 AT5G60610 29.833 419 244 18 33 435 2 386 1.63e-22 99.8
MS.gene89963.t1 AT3G58920 29.262 393 212 13 33 379 2 374 2.05e-22 100
MS.gene89963.t1 AT5G53840 29.767 430 238 19 31 435 16 406 2.70e-22 99.8
MS.gene89963.t1 AT4G00160 28.605 430 263 15 33 447 16 416 3.55e-22 99.4
MS.gene89963.t1 AT3G58960 26.915 457 262 15 33 437 2 438 1.29e-21 97.8
MS.gene89963.t1 AT1G51370 37.879 198 101 7 30 222 16 196 2.99e-21 95.1
MS.gene89963.t1 AT5G38570 26.196 439 239 15 33 457 2 369 3.32e-21 95.5
MS.gene89963.t1 AT1G32375 27.689 437 263 17 33 451 2 403 3.74e-21 95.9
MS.gene89963.t1 AT1G32375 27.689 437 263 17 33 451 2 403 3.74e-21 95.9
MS.gene89963.t1 AT4G13960 28.108 370 213 11 33 370 2 350 4.64e-21 96.3
MS.gene89963.t1 AT4G13960 28.108 370 213 11 33 370 2 350 4.64e-21 96.3
MS.gene89963.t1 AT3G56780 26.465 495 270 19 35 463 9 475 6.18e-21 95.9
MS.gene89963.t1 AT1G55030 26.442 416 252 16 33 432 19 396 6.98e-21 95.5
MS.gene89963.t1 AT3G58880 28.493 365 218 11 33 370 3 351 7.22e-21 95.5
MS.gene89963.t1 AT1G55030 26.442 416 252 16 33 432 9 386 8.13e-21 95.1
MS.gene89963.t1 AT3G59170 29.517 393 209 13 33 369 7 387 1.43e-20 94.7
MS.gene89963.t1 AT1G66300 26.739 460 273 17 28 457 24 449 1.67e-20 94.4
MS.gene89963.t1 AT1G06630 31.579 361 203 15 33 370 12 351 3.00e-20 92.4
MS.gene89963.t1 AT1G06630 31.579 361 203 15 33 370 12 351 3.00e-20 92.4
MS.gene89963.t1 AT1G06630 30.709 381 220 15 13 370 1 360 4.60e-20 92.8
MS.gene89963.t1 AT3G52680 27.064 436 260 14 33 447 21 419 5.06e-20 92.8
MS.gene89963.t1 AT5G44490 27.571 457 253 19 28 444 12 430 5.83e-20 92.8
MS.gene89963.t1 AT1G06630 31.579 361 203 15 33 370 12 351 6.35e-20 92.0
MS.gene89963.t1 AT1G06630 31.579 361 203 15 33 370 12 351 6.35e-20 92.0
MS.gene89963.t1 AT1G06630 31.579 361 203 15 33 370 12 351 6.35e-20 92.0
MS.gene89963.t1 AT1G06630 31.579 361 203 15 33 370 12 351 6.35e-20 92.0
MS.gene89963.t1 AT5G44490 27.571 457 253 19 28 444 12 430 8.11e-20 92.4
MS.gene89963.t1 AT3G03030 29.231 325 183 9 33 320 2 316 8.18e-20 90.9
MS.gene89963.t1 AT5G22670 28.140 430 248 20 32 432 10 407 1.06e-19 92.0
MS.gene89963.t1 AT1G69630 27.882 373 225 12 23 370 8 361 1.33e-19 91.7
MS.gene89963.t1 AT1G06630 31.579 361 203 15 33 370 12 351 1.44e-19 91.7
MS.gene89963.t1 AT3G58900 29.227 414 241 13 33 409 2 400 1.52e-19 91.7
MS.gene89963.t1 AT3G59250 26.869 428 248 15 33 439 7 390 1.53e-19 91.3
MS.gene89963.t1 AT5G56420 27.053 414 263 17 32 435 5 389 3.93e-19 90.1
MS.gene89963.t1 AT5G56420 27.053 414 263 17 32 435 5 389 3.93e-19 90.1
MS.gene89963.t1 AT5G56420 27.053 414 263 17 32 435 5 389 3.93e-19 90.1
MS.gene89963.t1 AT2G04230 26.395 466 286 16 32 472 12 445 4.90e-19 89.7
MS.gene89963.t1 AT5G44950 28.103 427 258 18 33 435 4 405 5.70e-19 89.7
MS.gene89963.t1 AT3G62430 30.000 360 210 14 33 370 2 341 6.86e-19 89.4
MS.gene89963.t1 AT1G78760 27.231 437 263 20 31 443 14 419 7.22e-19 89.4
MS.gene89963.t1 AT2G29930 29.032 372 194 17 33 370 12 347 7.64e-19 89.4
MS.gene89963.t1 AT2G29930 29.032 372 194 17 33 370 12 347 7.64e-19 89.4
MS.gene89963.t1 AT3G62440 29.188 394 218 18 33 385 2 375 8.13e-19 89.4
MS.gene89963.t1 AT4G15060 27.548 363 217 13 30 370 23 361 1.01e-18 88.6
MS.gene89963.t1 AT5G38386 25.568 352 193 11 33 370 2 298 1.34e-18 88.2
MS.gene89963.t1 AT5G38386 25.568 352 193 11 33 370 2 298 1.34e-18 88.2
MS.gene89963.t1 AT1G66310 25.778 450 286 13 28 457 14 435 1.38e-18 88.6
MS.gene89963.t1 AT3G26930 28.675 415 252 16 32 433 20 403 1.68e-18 88.2
MS.gene89963.t1 AT5G53635 27.674 430 254 20 35 435 2 403 1.93e-18 87.8
MS.gene89963.t1 AT3G59240 27.374 358 225 11 33 369 8 351 2.02e-18 88.2
MS.gene89963.t1 AT5G18770 26.452 465 287 16 33 466 24 464 2.63e-18 87.8
MS.gene89963.t1 AT1G78750 28.000 375 229 14 23 370 8 368 2.73e-18 87.8
MS.gene89963.t1 AT1G78750 28.000 375 229 14 23 370 8 368 2.73e-18 87.8
MS.gene89963.t1 AT2G42720 30.601 366 203 15 33 369 2 345 2.86e-18 87.4
MS.gene89963.t1 AT1G05080 28.235 425 256 16 32 435 12 408 5.29e-18 86.7
MS.gene89963.t1 AT5G22700 27.571 457 250 18 16 432 26 441 5.74e-18 86.7
MS.gene89963.t1 AT2G26030 27.400 427 260 18 33 433 4 406 5.89e-18 86.7
MS.gene89963.t1 AT2G26030 27.400 427 260 18 33 433 4 406 5.89e-18 86.7
MS.gene89963.t1 AT3G49030 27.252 444 274 15 31 458 19 429 7.63e-18 86.3
MS.gene89963.t1 AT5G38392 35.577 208 108 7 33 223 2 200 8.80e-18 82.4
MS.gene89963.t1 AT3G58930 27.415 383 217 11 33 370 2 368 1.02e-17 85.9
MS.gene89963.t1 AT3G58930 27.415 383 217 11 33 370 2 368 1.02e-17 85.9
MS.gene89963.t1 AT3G58930 27.415 383 217 11 33 370 2 368 1.02e-17 85.9
MS.gene89963.t1 AT2G26030 27.442 430 261 19 33 433 4 411 1.11e-17 85.9
MS.gene89963.t1 AT1G52650 25.792 442 262 15 33 435 2 416 1.13e-17 85.9
MS.gene89963.t1 AT5G18780 26.339 448 263 19 33 449 11 422 1.63e-17 85.1
MS.gene89963.t1 AT5G18780 26.339 448 263 19 33 449 11 422 1.63e-17 85.1
MS.gene89963.t1 AT4G15060 28.135 327 194 11 14 318 153 460 1.92e-17 85.5
MS.gene89963.t1 AT1G66290 26.620 432 259 17 28 435 24 421 2.10e-17 85.1
MS.gene89963.t1 AT5G22700 27.477 444 233 18 33 432 6 404 2.49e-17 84.7
MS.gene89963.t1 AT5G22700 27.477 444 233 18 33 432 6 404 2.49e-17 84.7
MS.gene89963.t1 AT5G22700 27.477 444 233 18 33 432 6 404 2.49e-17 84.7
MS.gene89963.t1 AT5G22700 27.477 444 233 18 33 432 6 404 2.49e-17 84.7
MS.gene89963.t1 AT5G56410 27.174 460 256 20 33 449 2 425 3.09e-17 84.7
MS.gene89963.t1 AT3G26930 27.979 386 234 16 60 432 3 357 3.11e-17 84.0
MS.gene89963.t1 AT5G56820 26.739 460 251 20 33 466 15 414 5.72e-17 83.6
MS.gene89963.t1 AT1G16930 26.549 452 238 20 33 447 15 409 1.03e-16 82.8
MS.gene89963.t1 AT1G16930 26.549 452 238 20 33 447 15 409 1.03e-16 82.8
MS.gene89963.t1 AT1G16930 26.549 452 238 20 33 447 15 409 1.03e-16 82.8
MS.gene89963.t1 AT3G58900 30.675 326 177 9 33 322 2 314 1.10e-16 81.3
MS.gene89963.t1 AT5G38390 25.450 444 257 18 33 436 2 411 1.31e-16 82.4
MS.gene89963.t1 AT4G09920 27.986 293 192 9 33 319 2 281 1.86e-16 80.5
MS.gene89963.t1 AT4G09920 27.986 293 192 9 33 319 2 281 1.86e-16 80.5
MS.gene89963.t1 AT3G58980 26.096 456 281 14 33 460 2 429 1.92e-16 82.4
MS.gene89963.t1 AT3G44060 29.839 372 213 21 38 384 4 352 2.00e-16 81.6
MS.gene89963.t1 AT5G38590 29.153 295 181 10 33 318 2 277 2.15e-16 80.1
MS.gene89963.t1 AT3G58900 30.745 322 174 9 33 318 2 310 2.30e-16 80.5
MS.gene89963.t1 AT3G58900 30.745 322 174 9 33 318 2 310 2.30e-16 80.5
MS.gene89963.t1 AT5G27750 26.009 446 261 19 33 435 5 424 2.36e-16 81.6
MS.gene89963.t1 AT3G56780 26.559 433 232 17 35 409 9 413 2.93e-16 81.3
MS.gene89963.t1 AT4G09920 28.082 292 191 9 33 318 2 280 3.29e-16 79.3
MS.gene89963.t1 AT4G09920 28.082 292 191 9 33 318 2 280 3.29e-16 79.3
MS.gene89963.t1 AT4G09920 28.082 292 191 9 33 318 2 280 3.29e-16 79.3
MS.gene89963.t1 AT2G42730 26.620 432 270 16 33 435 5 418 3.78e-16 81.3
MS.gene89963.t1 AT3G42770 28.140 430 244 19 38 439 4 396 4.58e-16 81.3
MS.gene89963.t1 AT3G58940 27.198 364 211 10 33 370 2 337 4.73e-16 81.3
MS.gene89963.t1 AT3G58940 27.198 364 211 10 33 370 2 337 4.73e-16 81.3
MS.gene89963.t1 AT5G56370 29.942 344 205 15 33 370 2 315 7.42e-16 79.0
MS.gene89963.t1 AT5G22730 26.450 431 263 15 32 433 27 432 8.16e-16 80.1
MS.gene89963.t1 AT5G22730 26.450 431 263 15 32 433 27 432 8.16e-16 80.1
MS.gene89963.t1 AT4G13985 28.533 368 224 14 28 370 14 367 9.09e-16 80.1
MS.gene89963.t1 AT4G10420 26.667 345 213 12 123 457 1 315 1.05e-15 78.6
MS.gene89963.t1 AT5G25860 28.649 370 216 16 33 370 12 365 2.31e-15 78.6
MS.gene89963.t1 AT1G48400 25.696 467 262 16 33 435 10 455 2.93e-15 78.6
MS.gene89963.t1 AT3G26922 33.068 251 135 12 32 268 13 244 4.36e-15 76.3
MS.gene89963.t1 AT3G26922 33.068 251 135 12 32 268 13 244 4.36e-15 76.3
MS.gene89963.t1 AT5G41630 28.000 400 216 15 33 382 12 389 5.87e-15 77.4
MS.gene89963.t1 AT1G06630 32.459 305 163 14 33 314 12 296 6.59e-15 75.9
MS.gene89963.t1 AT5G56700 29.483 329 200 15 117 437 48 352 6.85e-15 76.6
MS.gene89963.t1 AT3G51530 25.268 467 285 18 1 445 1 425 7.27e-15 77.0
MS.gene89963.t1 AT5G22700 34.419 215 107 8 16 217 26 219 8.03e-15 77.0
MS.gene89963.t1 AT3G59150 27.155 464 261 20 33 445 13 450 9.32e-15 77.0
MS.gene89963.t1 AT5G22610 26.941 438 263 18 32 449 17 417 1.21e-14 76.6
MS.gene89963.t1 AT3G49150 25.265 471 296 17 33 466 16 467 1.33e-14 76.3
MS.gene89963.t1 AT5G27750 26.684 386 221 15 33 376 5 370 1.39e-14 75.9
MS.gene89963.t1 AT3G59000 33.023 215 113 10 33 219 2 213 1.79e-14 75.1
MS.gene89963.t1 AT3G59180 29.333 300 171 11 93 368 41 323 2.27e-14 75.5
MS.gene89963.t1 AT3G60040 27.041 392 231 13 7 370 218 582 2.45e-14 76.3
MS.gene89963.t1 AT5G22610 26.652 454 274 18 32 449 17 447 2.58e-14 75.5
MS.gene89963.t1 AT3G60040 27.041 392 231 13 7 370 219 583 2.72e-14 76.3
MS.gene89963.t1 AT3G52680 28.492 358 200 12 33 370 21 342 2.82e-14 74.7
MS.gene89963.t1 AT3G60040 27.322 366 223 11 33 370 13 363 3.32e-14 75.5
MS.gene89963.t1 AT5G18780 26.558 369 210 15 33 371 11 348 3.33e-14 74.7
MS.gene89963.t1 AT5G18780 26.558 369 210 15 33 371 11 348 3.33e-14 74.7
MS.gene89963.t1 AT3G60040 27.041 392 231 13 7 370 218 582 3.46e-14 75.5
MS.gene89963.t1 AT3G60040 27.041 392 231 13 7 370 216 580 3.64e-14 75.5
MS.gene89963.t1 AT5G22660 25.000 440 257 16 32 435 12 414 3.73e-14 74.7
MS.gene89963.t1 AT5G56690 28.741 421 255 19 35 435 4 399 5.67e-14 73.9
MS.gene89963.t1 AT5G56390 25.891 421 268 14 33 437 2 394 1.00e-13 73.6
MS.gene89963.t1 AT5G18770 27.171 357 219 12 33 366 24 362 1.13e-13 72.8
MS.gene89963.t1 AT3G26920 26.220 328 210 12 113 432 2 305 2.71e-13 71.6
MS.gene89963.t1 AT3G26920 26.220 328 210 12 113 432 2 305 2.71e-13 71.6
MS.gene89963.t1 AT3G59000 24.943 441 279 15 33 437 2 426 3.89e-13 72.0
MS.gene89963.t1 AT5G25850 33.508 191 105 8 33 217 20 194 5.55e-13 71.2
MS.gene89963.t1 AT2G29910 27.954 347 198 13 33 345 5 333 7.95e-13 70.1
MS.gene89963.t1 AT2G29910 27.954 347 198 13 33 345 5 333 7.95e-13 70.1
MS.gene89963.t1 AT2G29910 27.954 347 198 13 33 345 5 333 7.95e-13 70.1
MS.gene89963.t1 AT2G29910 27.954 347 198 13 33 345 5 333 7.95e-13 70.1
MS.gene89963.t1 AT1G22000 25.558 493 291 20 10 464 6 460 9.80e-13 70.5
MS.gene89963.t1 AT2G29910 27.954 347 198 13 33 345 29 357 1.03e-12 70.1
MS.gene89963.t1 AT5G22720 26.362 459 255 18 20 433 10 430 1.07e-12 70.5
MS.gene89963.t1 AT3G54910 25.886 367 236 14 103 462 36 373 1.12e-12 69.7
MS.gene89963.t1 AT3G54910 25.886 367 236 14 103 462 36 373 1.12e-12 69.7
MS.gene89963.t1 AT3G54910 25.886 367 236 14 103 462 36 373 1.12e-12 69.7
MS.gene89963.t1 AT5G56810 26.047 430 278 12 33 451 15 415 2.89e-12 68.9
MS.gene89963.t1 AT5G53640 30.159 189 118 6 31 217 20 196 3.09e-12 66.6
MS.gene89963.t1 AT5G38590 33.582 134 87 2 33 164 2 135 5.91e-12 66.6
MS.gene89963.t1 AT2G29910 31.579 190 116 6 33 219 5 183 6.13e-12 67.4
MS.gene89963.t1 AT2G29910 31.579 190 116 6 33 219 5 183 6.13e-12 67.4
MS.gene89963.t1 AT5G22730 31.658 199 117 7 32 223 27 213 6.55e-12 67.8
MS.gene89963.t1 AT3G58930 25.474 369 208 10 33 370 2 334 7.37e-12 67.8
MS.gene89963.t1 AT3G58930 25.474 369 208 10 33 370 2 334 7.37e-12 67.8
MS.gene89963.t1 AT3G56780 30.688 189 115 6 35 219 9 185 8.33e-12 67.4
MS.gene89963.t1 AT1G16940 24.638 414 256 17 32 432 10 380 1.14e-11 67.0
MS.gene89963.t1 AT2G29930 31.679 262 120 15 133 370 1 227 2.01e-11 65.9
MS.gene89963.t1 AT1G78840 25.223 448 274 19 30 448 2 417 2.14e-11 66.2
MS.gene89963.t1 AT1G78840 25.223 448 274 19 30 448 2 417 2.14e-11 66.2
MS.gene89963.t1 AT1G48400 29.818 275 160 10 33 288 10 270 4.61e-11 65.5

Find 83 sgRNAs with CRISPR-Local

Find 131 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCATTGCATTTGAATTTAA+AGG 0.125528 4.2:+47738830 MS.gene89963:CDS
ACTTAAGGATCTTGCAATTA+TGG 0.162434 4.2:+47738395 MS.gene89963:CDS
ATTCACAAATTTGATTTCTT+TGG 0.190993 4.2:-47737471 None:intergenic
AAAGTCAAGGTTGGGAATTT+TGG 0.261346 4.2:-47737417 None:intergenic
ATTGCAAGATCCTTAAGTTT+TGG 0.271802 4.2:-47738390 None:intergenic
ACAGATCCAAGTCAAGTTTC+TGG 0.309423 4.2:-47737607 None:intergenic
TAATTCAATTGAAGATCATT+TGG 0.321337 4.2:+47739346 MS.gene89963:CDS
GTTTCCAACCTCATTTCTTC+GGG 0.355956 4.2:-47738759 None:intergenic
TATCCTGTAACTAGATTAAG+AGG 0.361958 4.2:-47739402 None:intergenic
AGTTTCCAACCTCATTTCTT+CGG 0.365062 4.2:-47738760 None:intergenic
GGTGGTGTTCATTGAAATCT+TGG 0.383907 4.2:-47739375 None:intergenic
ACTCGTGGTGTTAAAATTGC+GGG 0.388609 4.2:+47737679 MS.gene89963:CDS
ATGAGGTTGGAAACTCTAGA+TGG 0.416736 4.2:+47738768 MS.gene89963:CDS
ACAGAATGCTCCAAAACTTA+AGG 0.424972 4.2:+47738380 MS.gene89963:CDS
TGTTGCTAGACACCTTGTTA+AGG 0.444267 4.2:+47736951 MS.gene89963:CDS
AGAAATCCTCCTTACTCGTA+TGG 0.452587 4.2:+47738987 MS.gene89963:CDS
TATCAGCTGAAACTTGGCTT+AGG 0.457511 4.2:-47736925 None:intergenic
AAGTGAAAAGAGGTGTTGAT+AGG 0.462824 4.2:-47737884 None:intergenic
TATACTCAGGTGTTCAGCTC+AGG 0.473745 4.2:+47737256 MS.gene89963:intron
GGTAATTGAAAGTCAAGGTT+GGG 0.476845 4.2:-47737425 None:intergenic
GTATACAAATTGTTAAAATC+CGG 0.478212 4.2:-47738088 None:intergenic
AAATTCAAATGCAATGAGAC+TGG 0.478300 4.2:-47738825 None:intergenic
AAGTAGGCATATATAAAGTA+AGG 0.479565 4.2:-47737922 None:intergenic
TTGATTTCTTTGGACAACTC+AGG 0.483223 4.2:-47737461 None:intergenic
TGTAAGTCACTCAAGTAAGT+TGG 0.491102 4.2:+47738895 MS.gene89963:CDS
TCTTTGCATTTGTAAGCGTC+CGG 0.498367 4.2:+47738069 MS.gene89963:CDS
CAAGGTCCAGAAACTTGACT+TGG 0.499109 4.2:+47737601 MS.gene89963:CDS
AATTTGTATACACTCTTGAA+AGG 0.500652 4.2:+47738100 MS.gene89963:CDS
GTAACTAGATTAAGAGGGTC+GGG 0.502456 4.2:-47739396 None:intergenic
TGATTTCTTTGGACAACTCA+GGG 0.514750 4.2:-47737460 None:intergenic
AACTCAGGGTCTGAAATCTC+TGG 0.516045 4.2:-47737446 None:intergenic
TAGAATACGCCACAGTTTCA+CGG 0.516230 4.2:-47737769 None:intergenic
TACTTTATATATGCCTACTT+CGG 0.518831 4.2:+47737925 MS.gene89963:CDS
TCTCTTCAATAAGTGAAAAG+AGG 0.524063 4.2:-47737894 None:intergenic
AATCAATTCCCGAAGAAATG+AGG 0.525787 4.2:+47738751 MS.gene89963:CDS
GAAATCCTCCTTACTCGTAT+GGG 0.527180 4.2:+47738988 MS.gene89963:CDS
TGTACACATGTGGGTTTCAA+AGG 0.528762 4.2:+47737568 MS.gene89963:CDS
ACTTCGTACCCATACGAGTA+AGG 0.534778 4.2:-47738996 None:intergenic
GATAGGTAATGCAAAGGTCT+CGG 0.536969 4.2:-47737867 None:intergenic
CACTCGTGGTGTTAAAATTG+CGG 0.539050 4.2:+47737678 MS.gene89963:CDS
TAGAAAGAACTTCAAGTGAA+GGG 0.540099 4.2:-47737979 None:intergenic
CATGTGTTCTATCCACAAGA+TGG 0.542093 4.2:+47737381 MS.gene89963:CDS
TTCAAAGGCATTAGATCTCA+AGG 0.542872 4.2:+47737583 MS.gene89963:CDS
TGTTATGCAGTTTCTCAGGA+TGG 0.543982 4.2:+47738254 MS.gene89963:intron
CAACACTTAATAACCGAAGT+AGG 0.548618 4.2:-47737938 None:intergenic
TGGTAATTGAAAGTCAAGGT+TGG 0.551378 4.2:-47737426 None:intergenic
CTAAGTCTTGATAGCAACAA+AGG 0.551526 4.2:+47737530 MS.gene89963:CDS
ATAGAAAGAACTTCAAGTGA+AGG 0.561374 4.2:-47737980 None:intergenic
ACTTTCTAATGTCAAAACAT+TGG 0.567332 4.2:+47738123 MS.gene89963:CDS
AATTCCCGAAGAAATGAGGT+TGG 0.567804 4.2:+47738755 MS.gene89963:CDS
GAAGGGGCATTAATTTGTAG+TGG 0.570310 4.2:-47737962 None:intergenic
CAGGTGTTCAGCTCAGGTCA+TGG 0.572339 4.2:+47737262 MS.gene89963:intron
ATGTGTTCTATCCACAAGAT+GGG 0.579779 4.2:+47737382 MS.gene89963:CDS
AGACATGCCGGAGTTACTGA+TGG 0.583941 4.2:-47738797 None:intergenic
AAATATCTGAGAATTGCAGT+TGG 0.586019 4.2:+47738337 MS.gene89963:CDS
AAAAGAAGTTCCTCTAGATG+TGG 0.586225 4.2:-47737842 None:intergenic
ATCTGGTTGTCCACATCTAG+AGG 0.586521 4.2:+47737832 MS.gene89963:CDS
TGAAAAGAAGAATTGAGTGT+TGG 0.588267 4.2:-47737713 None:intergenic
ATAATAAATTGTGAAAAGTG+AGG 0.589470 4.2:-47738302 None:intergenic
TCACTCAAGTAAGTTGGAGA+AGG 0.592918 4.2:+47738901 MS.gene89963:CDS
GGTGGAGCCATCAGTAACTC+CGG 0.595318 4.2:+47738790 MS.gene89963:CDS
AATGTCAAAACATTGGCTCT+CGG 0.596249 4.2:+47738130 MS.gene89963:CDS
TGTAACTAGATTAAGAGGGT+CGG 0.598827 4.2:-47739397 None:intergenic
AGAAAGAACTTCAAGTGAAG+GGG 0.603765 4.2:-47737978 None:intergenic
GCAGATTGACTCCCATCTTG+TGG 0.609178 4.2:-47737393 None:intergenic
TGAGGTTGGAAACTCTAGAT+GGG 0.616468 4.2:+47738769 MS.gene89963:CDS
TATGCAGTTTCTCAGGATGG+AGG 0.626895 4.2:+47738257 MS.gene89963:intron
TCTTCATCTCCGTGAAACTG+TGG 0.632446 4.2:+47737760 MS.gene89963:CDS
GGTGTTGATAGGTAATGCAA+AGG 0.643336 4.2:-47737873 None:intergenic
GCCACATGATGTACACATGT+GGG 0.650684 4.2:+47737559 MS.gene89963:CDS
GGTTGGAAACTCTAGATGGG+TGG 0.653900 4.2:+47738772 MS.gene89963:CDS
ACATGTGTACATCATGTGGC+TGG 0.656362 4.2:-47737556 None:intergenic
AGATGAAGAATCTTTAGTGA+CGG 0.657169 4.2:-47737746 None:intergenic
TTCCACGTGTGAGTCACTCG+TGG 0.657233 4.2:+47737664 MS.gene89963:CDS
CACCACGAGTGACTCACACG+TGG 0.657543 4.2:-47737666 None:intergenic
CTCGTGGTGTTAAAATTGCG+GGG 0.670217 4.2:+47737680 MS.gene89963:CDS
ACCCACATGTGTACATCATG+TGG 0.672342 4.2:-47737560 None:intergenic
AGCCACATGATGTACACATG+TGG 0.685172 4.2:+47737558 MS.gene89963:CDS
TCTCTGGTAATTGAAAGTCA+AGG 0.696256 4.2:-47737430 None:intergenic
TCACACGTGGAAAGCCTAAG+CGG 0.701582 4.2:-47737653 None:intergenic
TCGTACCCATACGAGTAAGG+AGG 0.707148 4.2:-47738993 None:intergenic
ACTAGATTAAGAGGGTCGGG+TGG 0.718609 4.2:-47739393 None:intergenic
ATCCTGTAACTAGATTAAGA+GGG 0.720026 4.2:-47739401 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGATTTAATTATTCAATAT+TGG + chr4.2:47739312-47739331 MS.gene89963:intron 10.0%
!! GAATTAATTAAATTGTTTAT+CGG - chr4.2:47738551-47738570 None:intergenic 10.0%
!! TTTAAAAGATGAAATATAAT+AGG + chr4.2:47738461-47738480 MS.gene89963:intron 10.0%
!! ATGTAATTAAAAAATTTGAG+AGG - chr4.2:47739266-47739285 None:intergenic 15.0%
!! TATATATACAATTACATTCA+TGG + chr4.2:47739199-47739218 MS.gene89963:intron 15.0%
!!! ACTTAGTTTTCTTATATTTT+CGG - chr4.2:47737516-47737535 None:intergenic 15.0%
!! AAGTAAAATAGTTTGAAAGA+AGG - chr4.2:47738625-47738644 None:intergenic 20.0%
!! AGTATATAATAAACTCTGTA+TGG - chr4.2:47739041-47739060 None:intergenic 20.0%
!! ATAATAAATTGTGAAAAGTG+AGG - chr4.2:47738305-47738324 None:intergenic 20.0%
!! GTATACAAATTGTTAAAATC+CGG - chr4.2:47738091-47738110 None:intergenic 20.0%
!! TAATTCAATTGAAGATCATT+TGG + chr4.2:47739346-47739365 MS.gene89963:CDS 20.0%
!!! AATTATTCAATATTGGTTAC+AGG + chr4.2:47739319-47739338 MS.gene89963:intron 20.0%
!!! ATTCACAAATTTGATTTCTT+TGG - chr4.2:47737474-47737493 None:intergenic 20.0%
!!! GTATCTTAATATTTGTTAGT+AGG + chr4.2:47739084-47739103 MS.gene89963:intron 20.0%
!!! TATTATTAGAATTTTCCAAC+TGG - chr4.2:47738701-47738720 None:intergenic 20.0%
!!! TTCTATTGTTGATTTTTCAT+TGG + chr4.2:47737997-47738016 MS.gene89963:CDS 20.0%
!!! TTTGTAAAGTCATATTTTCT+AGG - chr4.2:47738025-47738044 None:intergenic 20.0%
! AAGTAACAAATCTTAGGAAT+AGG - chr4.2:47737160-47737179 None:intergenic 25.0%
! AAGTAGGCATATATAAAGTA+AGG - chr4.2:47737925-47737944 None:intergenic 25.0%
! AATGAGAATAGAATTGCATA+TGG - chr4.2:47738225-47738244 None:intergenic 25.0%
! AATTTGTATACACTCTTGAA+AGG + chr4.2:47738100-47738119 MS.gene89963:CDS 25.0%
! ACTTTCTAATGTCAAAACAT+TGG + chr4.2:47738123-47738142 MS.gene89963:CDS 25.0%
! AGTTTGAAAGAAGGTTAAAT+TGG - chr4.2:47738616-47738635 None:intergenic 25.0%
! ATGAGAATAGAATTGCATAT+GGG - chr4.2:47738224-47738243 None:intergenic 25.0%
! CTATTTACTATATATCCAGT+TGG + chr4.2:47738683-47738702 MS.gene89963:intron 25.0%
! CTCATTGCATTTGAATTTAA+AGG + chr4.2:47738830-47738849 MS.gene89963:CDS 25.0%
! GATTGATAAATAGAAAACGA+TGG - chr4.2:47737129-47737148 None:intergenic 25.0%
! GTTTGAAAGAAGGTTAAATT+GGG - chr4.2:47738615-47738634 None:intergenic 25.0%
! TACTTTATATATGCCTACTT+CGG + chr4.2:47737925-47737944 MS.gene89963:CDS 25.0%
! TCAAAACATAAAAACTGAGT+TGG + chr4.2:47738856-47738875 MS.gene89963:CDS 25.0%
! TTTCAGAAGTAACAAATCTT+AGG - chr4.2:47737166-47737185 None:intergenic 25.0%
!! GATCTCAATAATTTTCTATC+TGG + chr4.2:47737815-47737834 MS.gene89963:CDS 25.0%
!! TATAAGACTCTTTTGTTGAT+AGG - chr4.2:47737358-47737377 None:intergenic 25.0%
!!! TCTGTTTTAATGAAAAGAGT+TGG + chr4.2:47739062-47739081 MS.gene89963:intron 25.0%
AAATATCTGAGAATTGCAGT+TGG + chr4.2:47738337-47738356 MS.gene89963:CDS 30.0%
AAATTCAAATGCAATGAGAC+TGG - chr4.2:47738828-47738847 None:intergenic 30.0%
AAGACTTGGCAAAATATACA+TGG + chr4.2:47738510-47738529 MS.gene89963:intron 30.0%
ACTTAAGGATCTTGCAATTA+TGG + chr4.2:47738395-47738414 MS.gene89963:CDS 30.0%
AGATGAAGAATCTTTAGTGA+CGG - chr4.2:47737749-47737768 None:intergenic 30.0%
AGTAGAAAAAAGTTTACGCA+TGG + chr4.2:47738958-47738977 MS.gene89963:CDS 30.0%
ATAGAAAGAACTTCAAGTGA+AGG - chr4.2:47737983-47738002 None:intergenic 30.0%
ATATAATAGGCTCAAAAGTC+TGG + chr4.2:47738474-47738493 MS.gene89963:intron 30.0%
ATCATGTCATAACTATACTC+AGG + chr4.2:47737243-47737262 MS.gene89963:intron 30.0%
CATGATTGAAGAGATTTCAT+TGG - chr4.2:47737229-47737248 None:intergenic 30.0%
GACATATAAAGTTGTGTTGA+TGG - chr4.2:47739170-47739189 None:intergenic 30.0%
GTAGAAAAAAGTTTACGCAT+GGG + chr4.2:47738959-47738978 MS.gene89963:CDS 30.0%
TAGAAAAAAGTTTACGCATG+GGG + chr4.2:47738960-47738979 MS.gene89963:CDS 30.0%
TAGAAAACGATGGAAAATAG+AGG - chr4.2:47737119-47737138 None:intergenic 30.0%
TAGAAAGAACTTCAAGTGAA+GGG - chr4.2:47737982-47738001 None:intergenic 30.0%
TCTCTTCAATAAGTGAAAAG+AGG - chr4.2:47737897-47737916 None:intergenic 30.0%
TGAAAAGAAGAATTGAGTGT+TGG - chr4.2:47737716-47737735 None:intergenic 30.0%
! AAAAAATCTTATTGCCGCTT+AGG + chr4.2:47737639-47737658 MS.gene89963:CDS 30.0%
! AATGTCTAGAACAATAAGAG+AGG - chr4.2:47739139-47739158 None:intergenic 30.0%
! ACATTTTATCAGCTGAAACT+TGG - chr4.2:47736934-47736953 None:intergenic 30.0%
! ATTGCAAGATCCTTAAGTTT+TGG - chr4.2:47738393-47738412 None:intergenic 30.0%
! ATTTGTTAGTAGGATGTTGT+GGG + chr4.2:47739094-47739113 MS.gene89963:intron 30.0%
! TATTTGTTAGTAGGATGTTG+TGG + chr4.2:47739093-47739112 MS.gene89963:intron 30.0%
!! ATTTTGTTATGCAGTTTCTC+AGG + chr4.2:47738250-47738269 MS.gene89963:intron 30.0%
!! TATAAAGTTGTGTTGATGGT+CGG - chr4.2:47739166-47739185 None:intergenic 30.0%
AAAAGAAGTTCCTCTAGATG+TGG - chr4.2:47737845-47737864 None:intergenic 35.0%
AATCAATTCCCGAAGAAATG+AGG + chr4.2:47738751-47738770 MS.gene89963:CDS 35.0%
ACAGAATGCTCCAAAACTTA+AGG + chr4.2:47738380-47738399 MS.gene89963:CDS 35.0%
AGAAAGAACTTCAAGTGAAG+GGG - chr4.2:47737981-47738000 None:intergenic 35.0%
AGTTTCCAACCTCATTTCTT+CGG - chr4.2:47738763-47738782 None:intergenic 35.0%
ATGTGTTCTATCCACAAGAT+GGG + chr4.2:47737382-47737401 MS.gene89963:CDS 35.0%
CAACACTTAATAACCGAAGT+AGG - chr4.2:47737941-47737960 None:intergenic 35.0%
GGTAATTGAAAGTCAAGGTT+GGG - chr4.2:47737428-47737447 None:intergenic 35.0%
GTGAAAAAGAGACCTTAACA+AGG - chr4.2:47736966-47736985 None:intergenic 35.0%
TCTCTGGTAATTGAAAGTCA+AGG - chr4.2:47737433-47737452 None:intergenic 35.0%
TGAAAGAAGGTTAAATTGGG+AGG - chr4.2:47738612-47738631 None:intergenic 35.0%
TGATTTCTTTGGACAACTCA+GGG - chr4.2:47737463-47737482 None:intergenic 35.0%
TGCATATGGGTGACTAAATA+TGG - chr4.2:47738211-47738230 None:intergenic 35.0%
TGGTAATTGAAAGTCAAGGT+TGG - chr4.2:47737429-47737448 None:intergenic 35.0%
TGTAAGTCACTCAAGTAAGT+TGG + chr4.2:47738895-47738914 MS.gene89963:CDS 35.0%
TGTAGACATGATTTCGACAA+GGG - chr4.2:47737030-47737049 None:intergenic 35.0%
TTGATTTCTTTGGACAACTC+AGG - chr4.2:47737464-47737483 None:intergenic 35.0%
TTGTAGACATGATTTCGACA+AGG - chr4.2:47737031-47737050 None:intergenic 35.0%
TTTGTTAGTAGGATGTTGTG+GGG + chr4.2:47739095-47739114 MS.gene89963:intron 35.0%
! AAAGTCAAGGTTGGGAATTT+TGG - chr4.2:47737420-47737439 None:intergenic 35.0%
! CTAAGTCTTGATAGCAACAA+AGG + chr4.2:47737530-47737549 MS.gene89963:CDS 35.0%
!! AAGTGAAAAGAGGTGTTGAT+AGG - chr4.2:47737887-47737906 None:intergenic 35.0%
!! AATGTCAAAACATTGGCTCT+CGG + chr4.2:47738130-47738149 MS.gene89963:CDS 35.0%
!! TTATATTTTCGGTGCGTCTT+AGG - chr4.2:47737505-47737524 None:intergenic 35.0%
!! TTCAAAGGCATTAGATCTCA+AGG + chr4.2:47737583-47737602 MS.gene89963:CDS 35.0%
!!! GCGGCAATAAGATTTTTTCA+TGG - chr4.2:47737637-47737656 None:intergenic 35.0%
AATTCCCGAAGAAATGAGGT+TGG + chr4.2:47738755-47738774 MS.gene89963:CDS 40.0%
ACAGATCCAAGTCAAGTTTC+TGG - chr4.2:47737610-47737629 None:intergenic 40.0%
AGAAATCCTCCTTACTCGTA+TGG + chr4.2:47738987-47739006 MS.gene89963:CDS 40.0%
ATGAGGTTGGAAACTCTAGA+TGG + chr4.2:47738768-47738787 MS.gene89963:CDS 40.0%
CATGTGTTCTATCCACAAGA+TGG + chr4.2:47737381-47737400 MS.gene89963:CDS 40.0%
GAAATCCTCCTTACTCGTAT+GGG + chr4.2:47738988-47739007 MS.gene89963:CDS 40.0%
GATAGGTAATGCAAAGGTCT+CGG - chr4.2:47737870-47737889 None:intergenic 40.0%
GGTGGTGTTCATTGAAATCT+TGG - chr4.2:47739378-47739397 None:intergenic 40.0%
GTTTCCAACCTCATTTCTTC+GGG - chr4.2:47738762-47738781 None:intergenic 40.0%
TAGAATACGCCACAGTTTCA+CGG - chr4.2:47737772-47737791 None:intergenic 40.0%
TATCAGCTGAAACTTGGCTT+AGG - chr4.2:47736928-47736947 None:intergenic 40.0%
TCTTTGCATTTGTAAGCGTC+CGG + chr4.2:47738069-47738088 MS.gene89963:CDS 40.0%
TGAGGTTGGAAACTCTAGAT+GGG + chr4.2:47738769-47738788 MS.gene89963:CDS 40.0%
TGTACACATGTGGGTTTCAA+AGG + chr4.2:47737568-47737587 MS.gene89963:CDS 40.0%
TGTTATGCAGTTTCTCAGGA+TGG + chr4.2:47738254-47738273 MS.gene89963:intron 40.0%
TGTTGCTAGACACCTTGTTA+AGG + chr4.2:47736951-47736970 MS.gene89963:CDS 40.0%
! ACTCGTGGTGTTAAAATTGC+GGG + chr4.2:47737679-47737698 MS.gene89963:CDS 40.0%
! CACTCGTGGTGTTAAAATTG+CGG + chr4.2:47737678-47737697 MS.gene89963:CDS 40.0%
! TCACTCAAGTAAGTTGGAGA+AGG + chr4.2:47738901-47738920 MS.gene89963:CDS 40.0%
!! GAAGGGGCATTAATTTGTAG+TGG - chr4.2:47737965-47737984 None:intergenic 40.0%
!! GGTGTTGATAGGTAATGCAA+AGG - chr4.2:47737876-47737895 None:intergenic 40.0%
!!! AGACTGGTTTTAAGACATGC+CGG - chr4.2:47738812-47738831 None:intergenic 40.0%
ACATGTGTACATCATGTGGC+TGG - chr4.2:47737559-47737578 None:intergenic 45.0%
ACCCACATGTGTACATCATG+TGG - chr4.2:47737563-47737582 None:intergenic 45.0%
ACTTCGTACCCATACGAGTA+AGG - chr4.2:47738999-47739018 None:intergenic 45.0%
AGCCACATGATGTACACATG+TGG + chr4.2:47737558-47737577 MS.gene89963:CDS 45.0%
ATCTGGTTGTCCACATCTAG+AGG + chr4.2:47737832-47737851 MS.gene89963:CDS 45.0%
CAAGGTCCAGAAACTTGACT+TGG + chr4.2:47737601-47737620 MS.gene89963:CDS 45.0%
GCAGTAGAAGAGCAAAGACT+TGG + chr4.2:47738496-47738515 MS.gene89963:intron 45.0%
GCCACATGATGTACACATGT+GGG + chr4.2:47737559-47737578 MS.gene89963:CDS 45.0%
TATACTCAGGTGTTCAGCTC+AGG + chr4.2:47737256-47737275 MS.gene89963:intron 45.0%
TATGCAGTTTCTCAGGATGG+AGG + chr4.2:47738257-47738276 MS.gene89963:intron 45.0%
TCTTCATCTCCGTGAAACTG+TGG + chr4.2:47737760-47737779 MS.gene89963:CDS 45.0%
! AACTCAGGGTCTGAAATCTC+TGG - chr4.2:47737449-47737468 None:intergenic 45.0%
! CTCGTGGTGTTAAAATTGCG+GGG + chr4.2:47737680-47737699 MS.gene89963:CDS 45.0%
!!! AAAATTCTAATAATATTTTT+TGG + chr4.2:47738706-47738725 MS.gene89963:intron 5.0%
AGACATGCCGGAGTTACTGA+TGG - chr4.2:47738800-47738819 None:intergenic 50.0%
GGTTGGAAACTCTAGATGGG+TGG + chr4.2:47738772-47738791 MS.gene89963:CDS 50.0%
GTTAGTAGGATGTTGTGGGG+TGG + chr4.2:47739098-47739117 MS.gene89963:intron 50.0%
TCACACGTGGAAAGCCTAAG+CGG - chr4.2:47737656-47737675 None:intergenic 50.0%
TCGTACCCATACGAGTAAGG+AGG - chr4.2:47738996-47739015 None:intergenic 50.0%
! GCAGATTGACTCCCATCTTG+TGG - chr4.2:47737396-47737415 None:intergenic 50.0%
CAGGTGTTCAGCTCAGGTCA+TGG + chr4.2:47737262-47737281 MS.gene89963:intron 55.0%
GGTGGAGCCATCAGTAACTC+CGG + chr4.2:47738790-47738809 MS.gene89963:CDS 55.0%
TTCCACGTGTGAGTCACTCG+TGG + chr4.2:47737664-47737683 MS.gene89963:CDS 55.0%
CACCACGAGTGACTCACACG+TGG - chr4.2:47737669-47737688 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 47736917 47739409 47736917 ID=MS.gene89963
chr4.2 mRNA 47736917 47739409 47736917 ID=MS.gene89963.t1;Parent=MS.gene89963
chr4.2 exon 47736917 47736972 47736917 ID=MS.gene89963.t1.exon1;Parent=MS.gene89963.t1
chr4.2 CDS 47736917 47736972 47736917 ID=cds.MS.gene89963.t1;Parent=MS.gene89963.t1
chr4.2 exon 47737265 47738168 47737265 ID=MS.gene89963.t1.exon2;Parent=MS.gene89963.t1
chr4.2 CDS 47737265 47738168 47737265 ID=cds.MS.gene89963.t1;Parent=MS.gene89963.t1
chr4.2 exon 47738264 47738416 47738264 ID=MS.gene89963.t1.exon3;Parent=MS.gene89963.t1
chr4.2 CDS 47738264 47738416 47738264 ID=cds.MS.gene89963.t1;Parent=MS.gene89963.t1
chr4.2 exon 47738740 47739009 47738740 ID=MS.gene89963.t1.exon4;Parent=MS.gene89963.t1
chr4.2 CDS 47738740 47739009 47738740 ID=cds.MS.gene89963.t1;Parent=MS.gene89963.t1
chr4.2 exon 47739341 47739409 47739341 ID=MS.gene89963.t1.exon5;Parent=MS.gene89963.t1
chr4.2 CDS 47739341 47739409 47739341 ID=cds.MS.gene89963.t1;Parent=MS.gene89963.t1
Gene Sequence

>MS.gene89963

ATGTTTAACCTAAGCCAAGTTTCAGCTGATAAAATGTTGCTAGACACCTTGTTAAGGTCTCTTTTTCACATGTGTGCATTCTGACTCTTTTTATTACATATTGCAAGTTTCCCTTGTCGAAATCATGTCTACAATTATGACAGCTTCAGTAACATTTTTCATGTAACATTTGTAAAAACATTTTTCACTTATATTCATTCCTCTATTTTCCATCGTTTTCTATTTATCAATCGTTTTGTACCTATTCCTAAGATTTGTTACTTCTGAAATCTAATTTTATTGAAATTGCGTTAATCTCTCTGTTTATTGCCAATGAAATCTCTTCAATCATGTCATAACTATACTCAGGTGTTCAGCTCAGGTCATGGCGTGCTCTGATGAAGAACATGATCGATTAAGCAATCTCTCAGACGATTTGATTTGTCATATTCTGTCTTTCCTATCAACAAAAGAGTCTTATAGAACATGTGTTCTATCCACAAGATGGGAGTCAATCTGCACCAAAATTCCCAACCTTGACTTTCAATTACCAGAGATTTCAGACCCTGAGTTGTCCAAAGAAATCAAATTTGTGAATGTCGCTCTCCTAAGACGCACCGAAAATATAAGAAAACTAAGTCTTGATAGCAACAAAGGCTGCCAGCCACATGATGTACACATGTGGGTTTCAAAGGCATTAGATCTCAAGGTCCAGAAACTTGACTTGGATCTGTTTCTCCATGAAAAAATCTTATTGCCGCTTAGGCTTTCCACGTGTGAGTCACTCGTGGTGTTAAAATTGCGGGGCAGAATTCAACCAACACTCAATTCTTCTTTTCATGTATATTTACCGTCACTAAAGATTCTTCATCTCCGTGAAACTGTGGCGTATTCTATCTTTGATGATCGTAGAGAGTATGATCTCAATAATTTTCTATCTGGTTGTCCACATCTAGAGGAACTTCTTTTAGCCGAGACCTTTGCATTACCTATCAACACCTCTTTTCACTTATTGAAGAGATTATTCCTTACTTTATATATGCCTACTTCGGTTATTAAGTGTTGTCCACTACAAATTAATGCCCCTTCACTTGAAGTTCTTTCTATTGTTGATTTTTCATTGGCTCCTAGAAAATATGACTTTACAAACTTGTCAAATCTTGATGAAGCTGCTCTTTGCATTTGTAAGCGTCCGGATTTTAACAATTTGTATACACTCTTGAAAGGACTTTCTAATGTCAAAACATTGGCTCTCGGTGCTAAAACTTTTCATGTAAGTTTCATAAATATGTTTCTTTTTTAATTACAAGTTCCATATTTAGTCACCCATATGCAATTCTATTCTCATTTTATAATTTTGTTATGCAGTTTCTCAGGATGGAGGACAAACTTGACAACTTACATCTCCTCACTTTTCACAATTTATTATATTTAACGATTGAAATATCTGAGAATTGCAGTTGGAATATGCTAGTCAGCTTTCTACAGAATGCTCCAAAACTTAAGGATCTTGCAATTATGGTGTGTATGATGTTCTTTTAACTATATTTGCACAATATTTTTTTTTTAAAAGATGAAATATAATAGGCTCAAAAGTCTGGCAGTAGAAGAGCAAAGACTTGGCAAAATATACATGGAGTTTGCAAATAAAACCGATAAACAATTTAATTAATTCTAAACAATCTATATCTGATCTATGTTTGTGTAGATTTTCCTCCCAATTTAACCTTCTTTCAAACTATTTTACTTTCAATTTTATCTTTATTTACTTAATAATATAATTGAAACTATTTACTATATATCCAGTTGGAAAATTCTAATAATATTTTTTGGTTTTCATGCAGAGAAAAATTGAAATCAATTCCCGAAGAAATGAGGTTGGAAACTCTAGATGGGTGGAGCCATCAGTAACTCCGGCATGTCTTAAAACCAGTCTCATTGCATTTGAATTTAAAGGAATTCAAAACATAAAAACTGAGTTGGACTTTACGCGATATATTGTAAGTCACTCAAGTAAGTTGGAGAAGGTAAAGATTTTCACAGCTACTGCAAAGAAAAGAAGAGTAGAAAAAAGTTTACGCATGGGGTCAAAGAAATCCTCCTTACTCGTATGGGTACGAAGTTTACACACTATCTTTTCTTCCATACAGAGTTTATTATATACTTTCTGTTTTAATGAAAAGAGTTGGTATCTTAATATTTGTTAGTAGGATGTTGTGGGGTGGTGATAGAACTTTCATCCTCTCTTATTGTTCTAGACATTAACTCCGACCATCAACACAACTTTATATGTCTTGAATTTATATATATACAATTACATTCATGGTTGAGAATAAGACTGTTTTTGTTAAAATAAATAAATTATATCCTCTCAAATTTTTTAATTACATTAATTTTTTTTTATCTTTATACTCTAATGATTTAATTATTCAATATTGGTTACAGGATATTAATTCAATTGAAGATCATTTGGATTTCTCCAAGATTTCAATGAACACCACCCGACCCTCTTAA

Protein sequence

>MS.gene89963.t1

MFNLSQVSADKMLLDTLLRCSAQVMACSDEEHDRLSNLSDDLICHILSFLSTKESYRTCVLSTRWESICTKIPNLDFQLPEISDPELSKEIKFVNVALLRRTENIRKLSLDSNKGCQPHDVHMWVSKALDLKVQKLDLDLFLHEKILLPLRLSTCESLVVLKLRGRIQPTLNSSFHVYLPSLKILHLRETVAYSIFDDRREYDLNNFLSGCPHLEELLLAETFALPINTSFHLLKRLFLTLYMPTSVIKCCPLQINAPSLEVLSIVDFSLAPRKYDFTNLSNLDEAALCICKRPDFNNLYTLLKGLSNVKTLALGAKTFHFLRMEDKLDNLHLLTFHNLLYLTIEISENCSWNMLVSFLQNAPKLKDLAIMRKIEINSRRNEVGNSRWVEPSVTPACLKTSLIAFEFKGIQNIKTELDFTRYIVSHSSKLEKVKIFTATAKKRRVEKSLRMGSKKSSLLVWDINSIEDHLDFSKISMNTTRPS