Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84247.t1 | XP_024638552.1 | 95.2 | 501 | 24 | 0 | 1 | 501 | 1 | 501 | 5.70E-250 | 873.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84247.t1 | Q84X02 | 28.1 | 455 | 265 | 13 | 9 | 457 | 2 | 400 | 8.3e-24 | 113.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84247.t1 | A0A072UVN2 | 95.2 | 501 | 24 | 0 | 1 | 501 | 1 | 501 | 4.1e-250 | 873.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84247.t1 | MTR_4g055990 | 95.409 | 501 | 23 | 0 | 1 | 501 | 1 | 501 | 0.0 | 957 |
MS.gene84247.t1 | MTR_4g055990 | 95.198 | 479 | 23 | 0 | 1 | 479 | 1 | 479 | 0.0 | 914 |
MS.gene84247.t1 | MTR_4g055580 | 83.903 | 497 | 74 | 2 | 1 | 497 | 92 | 582 | 0.0 | 814 |
MS.gene84247.t1 | MTR_4g056020 | 81.238 | 501 | 52 | 3 | 1 | 501 | 1 | 459 | 0.0 | 793 |
MS.gene84247.t1 | MTR_4g056040 | 79.541 | 479 | 86 | 3 | 1 | 479 | 1 | 467 | 0.0 | 753 |
MS.gene84247.t1 | MTR_4g056030 | 75.610 | 492 | 78 | 3 | 1 | 492 | 1 | 450 | 0.0 | 724 |
MS.gene84247.t1 | MTR_4g056070 | 81.448 | 442 | 74 | 2 | 1 | 439 | 1 | 437 | 0.0 | 717 |
MS.gene84247.t1 | MTR_1g038710 | 63.061 | 490 | 131 | 6 | 1 | 484 | 11 | 456 | 0.0 | 551 |
MS.gene84247.t1 | MTR_1g090883 | 58.524 | 393 | 122 | 5 | 2 | 392 | 12 | 365 | 2.72e-142 | 414 |
MS.gene84247.t1 | MTR_7g110920 | 56.704 | 358 | 103 | 5 | 136 | 479 | 1 | 320 | 2.26e-121 | 358 |
MS.gene84247.t1 | MTR_4g056020 | 82.738 | 168 | 24 | 1 | 334 | 501 | 1 | 163 | 1.42e-91 | 276 |
MS.gene84247.t1 | MTR_4g093690 | 49.191 | 309 | 111 | 7 | 1 | 305 | 10 | 276 | 4.55e-76 | 241 |
MS.gene84247.t1 | MTR_4g056010 | 90.000 | 100 | 10 | 0 | 105 | 204 | 1 | 100 | 2.00e-56 | 183 |
MS.gene84247.t1 | MTR_1g090900 | 52.336 | 214 | 62 | 4 | 1 | 211 | 1 | 177 | 7.39e-53 | 177 |
MS.gene84247.t1 | MTR_1g090890 | 63.333 | 90 | 27 | 2 | 393 | 479 | 30 | 116 | 2.83e-29 | 111 |
MS.gene84247.t1 | MTR_4g032730 | 29.191 | 507 | 253 | 25 | 9 | 471 | 15 | 459 | 1.33e-25 | 109 |
MS.gene84247.t1 | MTR_5g084070 | 27.607 | 489 | 274 | 15 | 5 | 481 | 9 | 429 | 2.49e-25 | 108 |
MS.gene84247.t1 | MTR_7g115270 | 25.793 | 473 | 244 | 14 | 9 | 471 | 12 | 387 | 6.82e-24 | 103 |
MS.gene84247.t1 | MTR_7g056433 | 27.352 | 457 | 218 | 18 | 4 | 453 | 7 | 356 | 4.12e-23 | 101 |
MS.gene84247.t1 | MTR_5g080710 | 27.802 | 464 | 250 | 15 | 9 | 458 | 33 | 425 | 1.15e-21 | 98.2 |
MS.gene84247.t1 | MTR_8g062270 | 27.948 | 458 | 268 | 17 | 9 | 453 | 16 | 424 | 1.68e-21 | 97.4 |
MS.gene84247.t1 | MTR_8g014260 | 25.794 | 504 | 270 | 16 | 6 | 476 | 13 | 445 | 9.99e-21 | 95.1 |
MS.gene84247.t1 | MTR_8g467800 | 28.982 | 452 | 252 | 17 | 5 | 442 | 16 | 412 | 3.20e-20 | 93.6 |
MS.gene84247.t1 | MTR_8g058970 | 26.735 | 490 | 283 | 21 | 4 | 465 | 14 | 455 | 3.50e-20 | 93.6 |
MS.gene84247.t1 | MTR_8g445780 | 26.432 | 454 | 233 | 15 | 9 | 438 | 13 | 389 | 2.09e-19 | 90.5 |
MS.gene84247.t1 | MTR_8g014160 | 26.087 | 483 | 246 | 18 | 4 | 475 | 36 | 418 | 6.19e-19 | 89.4 |
MS.gene84247.t1 | MTR_2g007400 | 25.051 | 491 | 252 | 20 | 9 | 482 | 12 | 403 | 6.40e-19 | 89.4 |
MS.gene84247.t1 | MTR_8g468810 | 26.395 | 466 | 270 | 15 | 4 | 453 | 20 | 428 | 2.22e-18 | 88.2 |
MS.gene84247.t1 | MTR_2g083840 | 27.615 | 478 | 266 | 18 | 9 | 467 | 21 | 437 | 1.80e-17 | 85.1 |
MS.gene84247.t1 | MTR_8g468840 | 26.078 | 464 | 267 | 18 | 9 | 453 | 14 | 420 | 3.73e-17 | 84.3 |
MS.gene84247.t1 | MTR_4g080773 | 27.484 | 473 | 267 | 21 | 6 | 453 | 13 | 434 | 4.30e-16 | 81.3 |
MS.gene84247.t1 | MTR_4g080773 | 27.484 | 473 | 267 | 21 | 6 | 453 | 13 | 434 | 4.78e-16 | 80.9 |
MS.gene84247.t1 | MTR_8g467800 | 29.947 | 374 | 193 | 14 | 5 | 365 | 16 | 333 | 2.56e-15 | 77.8 |
MS.gene84247.t1 | MTR_8g468810 | 27.381 | 336 | 186 | 11 | 4 | 327 | 20 | 309 | 1.89e-14 | 74.7 |
MS.gene84247.t1 | MTR_8g468810 | 27.381 | 336 | 186 | 11 | 4 | 327 | 20 | 309 | 2.23e-14 | 74.7 |
MS.gene84247.t1 | MTR_8g468810 | 27.381 | 336 | 186 | 11 | 4 | 327 | 20 | 309 | 2.55e-14 | 74.7 |
MS.gene84247.t1 | MTR_8g058965 | 25.466 | 483 | 252 | 19 | 9 | 454 | 13 | 424 | 2.57e-14 | 75.5 |
MS.gene84247.t1 | MTR_8g468810 | 27.381 | 336 | 186 | 11 | 4 | 327 | 20 | 309 | 8.31e-14 | 73.2 |
MS.gene84247.t1 | MTR_3g048290 | 26.160 | 474 | 265 | 20 | 5 | 453 | 19 | 432 | 8.58e-14 | 73.9 |
MS.gene84247.t1 | MTR_4g039440 | 24.000 | 475 | 243 | 19 | 9 | 476 | 34 | 397 | 1.02e-12 | 70.5 |
MS.gene84247.t1 | MTR_7g060470 | 24.236 | 458 | 257 | 18 | 9 | 465 | 3 | 371 | 2.69e-12 | 68.9 |
MS.gene84247.t1 | MTR_3g109982 | 24.696 | 494 | 269 | 17 | 4 | 453 | 8 | 442 | 4.02e-12 | 69.3 |
MS.gene84247.t1 | MTR_4g080787 | 25.407 | 492 | 278 | 21 | 6 | 469 | 13 | 443 | 4.56e-12 | 68.6 |
MS.gene84247.t1 | MTR_5g008950 | 32.432 | 111 | 65 | 2 | 348 | 455 | 233 | 336 | 8.69e-12 | 67.0 |
MS.gene84247.t1 | MTR_5g045170 | 29.464 | 224 | 110 | 9 | 11 | 230 | 16 | 195 | 2.68e-11 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84247.t1 | AT2G26860 | 29.139 | 453 | 263 | 16 | 9 | 457 | 2 | 400 | 2.97e-26 | 110 |
MS.gene84247.t1 | AT2G26860 | 29.139 | 453 | 263 | 16 | 9 | 457 | 2 | 400 | 2.97e-26 | 110 |
MS.gene84247.t1 | AT4G14103 | 28.910 | 422 | 218 | 16 | 9 | 401 | 8 | 376 | 7.09e-25 | 107 |
MS.gene84247.t1 | AT5G62970 | 30.870 | 460 | 263 | 23 | 9 | 457 | 2 | 417 | 7.23e-25 | 107 |
MS.gene84247.t1 | AT3G59160 | 26.942 | 412 | 229 | 15 | 9 | 382 | 13 | 390 | 3.19e-24 | 105 |
MS.gene84247.t1 | AT5G38396 | 27.368 | 475 | 263 | 18 | 9 | 454 | 2 | 423 | 9.22e-24 | 104 |
MS.gene84247.t1 | AT3G59190 | 28.678 | 401 | 221 | 13 | 9 | 385 | 12 | 371 | 1.51e-23 | 102 |
MS.gene84247.t1 | AT4G00320 | 28.218 | 404 | 227 | 13 | 3 | 382 | 7 | 371 | 1.63e-23 | 103 |
MS.gene84247.t1 | AT4G14103 | 28.463 | 397 | 208 | 14 | 9 | 381 | 8 | 352 | 1.97e-23 | 102 |
MS.gene84247.t1 | AT4G14103 | 28.463 | 397 | 208 | 14 | 9 | 381 | 8 | 352 | 1.97e-23 | 102 |
MS.gene84247.t1 | AT3G59190 | 28.818 | 406 | 223 | 14 | 9 | 390 | 12 | 375 | 3.05e-23 | 103 |
MS.gene84247.t1 | AT5G56380 | 28.009 | 457 | 240 | 18 | 9 | 441 | 2 | 393 | 3.99e-23 | 102 |
MS.gene84247.t1 | AT5G56380 | 28.009 | 457 | 240 | 18 | 9 | 441 | 2 | 393 | 3.99e-23 | 102 |
MS.gene84247.t1 | AT4G00315 | 27.789 | 493 | 246 | 23 | 9 | 464 | 2 | 421 | 2.16e-22 | 100 |
MS.gene84247.t1 | AT4G14096 | 26.794 | 418 | 228 | 15 | 8 | 401 | 7 | 370 | 3.14e-22 | 99.8 |
MS.gene84247.t1 | AT4G14096 | 26.794 | 418 | 228 | 15 | 8 | 401 | 7 | 370 | 3.14e-22 | 99.8 |
MS.gene84247.t1 | AT4G10400 | 25.942 | 451 | 254 | 14 | 9 | 453 | 2 | 378 | 3.61e-22 | 99.0 |
MS.gene84247.t1 | AT4G10400 | 25.942 | 451 | 254 | 14 | 9 | 453 | 2 | 378 | 3.61e-22 | 99.0 |
MS.gene84247.t1 | AT4G10400 | 25.942 | 451 | 254 | 14 | 9 | 453 | 2 | 378 | 3.61e-22 | 99.0 |
MS.gene84247.t1 | AT5G41830 | 27.103 | 428 | 238 | 14 | 3 | 403 | 7 | 387 | 3.84e-22 | 100 |
MS.gene84247.t1 | AT3G50710 | 27.332 | 461 | 259 | 14 | 9 | 458 | 2 | 397 | 4.34e-22 | 99.0 |
MS.gene84247.t1 | AT4G26340 | 26.957 | 460 | 245 | 19 | 9 | 452 | 2 | 386 | 1.18e-21 | 97.8 |
MS.gene84247.t1 | AT1G51370 | 26.596 | 470 | 258 | 18 | 7 | 462 | 17 | 413 | 2.45e-21 | 97.1 |
MS.gene84247.t1 | AT5G41840 | 27.561 | 410 | 223 | 11 | 9 | 383 | 14 | 384 | 1.15e-20 | 95.5 |
MS.gene84247.t1 | AT4G13965 | 27.253 | 466 | 252 | 22 | 9 | 461 | 10 | 401 | 1.18e-20 | 94.7 |
MS.gene84247.t1 | AT1G58310 | 28.676 | 408 | 217 | 17 | 9 | 382 | 8 | 375 | 1.57e-20 | 95.1 |
MS.gene84247.t1 | AT1G55660 | 26.452 | 465 | 266 | 19 | 9 | 454 | 53 | 460 | 1.78e-20 | 94.7 |
MS.gene84247.t1 | AT3G59170 | 28.087 | 413 | 226 | 15 | 9 | 382 | 7 | 387 | 2.14e-20 | 94.4 |
MS.gene84247.t1 | AT5G60610 | 27.948 | 458 | 244 | 18 | 9 | 453 | 2 | 386 | 3.57e-20 | 92.8 |
MS.gene84247.t1 | AT5G60610 | 27.948 | 458 | 244 | 18 | 9 | 453 | 2 | 386 | 3.57e-20 | 92.8 |
MS.gene84247.t1 | AT3G59230 | 25.984 | 508 | 272 | 17 | 9 | 473 | 12 | 458 | 3.76e-20 | 93.6 |
MS.gene84247.t1 | AT3G58920 | 28.256 | 407 | 217 | 15 | 9 | 383 | 2 | 365 | 1.19e-19 | 92.0 |
MS.gene84247.t1 | AT4G13960 | 26.250 | 480 | 255 | 17 | 9 | 454 | 2 | 416 | 1.29e-19 | 92.0 |
MS.gene84247.t1 | AT4G13960 | 26.250 | 480 | 255 | 17 | 9 | 454 | 2 | 416 | 1.29e-19 | 92.0 |
MS.gene84247.t1 | AT3G58960 | 26.988 | 415 | 200 | 15 | 9 | 384 | 2 | 352 | 1.78e-19 | 91.7 |
MS.gene84247.t1 | AT3G62430 | 28.173 | 394 | 210 | 14 | 9 | 383 | 2 | 341 | 4.57e-19 | 90.1 |
MS.gene84247.t1 | AT3G58880 | 25.682 | 440 | 258 | 13 | 9 | 427 | 3 | 394 | 5.07e-19 | 90.1 |
MS.gene84247.t1 | AT5G38590 | 25.983 | 458 | 254 | 16 | 9 | 455 | 2 | 385 | 5.30e-19 | 89.7 |
MS.gene84247.t1 | AT5G56370 | 27.766 | 479 | 260 | 20 | 9 | 477 | 2 | 404 | 6.78e-19 | 89.4 |
MS.gene84247.t1 | AT5G56370 | 27.766 | 479 | 260 | 20 | 9 | 477 | 2 | 404 | 6.78e-19 | 89.4 |
MS.gene84247.t1 | AT3G03030 | 27.470 | 415 | 226 | 13 | 9 | 390 | 2 | 374 | 1.11e-18 | 89.0 |
MS.gene84247.t1 | AT4G22280 | 28.250 | 400 | 211 | 14 | 9 | 393 | 2 | 340 | 1.30e-18 | 88.6 |
MS.gene84247.t1 | AT1G32375 | 26.891 | 476 | 251 | 18 | 9 | 465 | 2 | 399 | 1.40e-18 | 88.6 |
MS.gene84247.t1 | AT1G32375 | 26.891 | 476 | 251 | 18 | 9 | 465 | 2 | 399 | 1.40e-18 | 88.6 |
MS.gene84247.t1 | AT4G22280 | 29.262 | 393 | 200 | 15 | 9 | 385 | 2 | 332 | 1.42e-18 | 87.4 |
MS.gene84247.t1 | AT3G59210 | 29.000 | 400 | 217 | 14 | 5 | 382 | 3 | 357 | 2.61e-18 | 88.2 |
MS.gene84247.t1 | AT3G59210 | 29.000 | 400 | 217 | 14 | 5 | 382 | 3 | 357 | 2.61e-18 | 88.2 |
MS.gene84247.t1 | AT3G59210 | 29.000 | 400 | 217 | 14 | 5 | 382 | 3 | 357 | 2.61e-18 | 88.2 |
MS.gene84247.t1 | AT3G59210 | 29.000 | 400 | 217 | 14 | 5 | 382 | 3 | 357 | 2.61e-18 | 88.2 |
MS.gene84247.t1 | AT3G59210 | 29.000 | 400 | 217 | 14 | 5 | 382 | 3 | 357 | 2.61e-18 | 88.2 |
MS.gene84247.t1 | AT4G26350 | 23.555 | 467 | 264 | 16 | 9 | 454 | 2 | 396 | 2.79e-18 | 87.4 |
MS.gene84247.t1 | AT2G04230 | 25.605 | 496 | 282 | 17 | 8 | 483 | 12 | 440 | 4.72e-18 | 87.0 |
MS.gene84247.t1 | AT3G59200 | 25.908 | 413 | 218 | 12 | 8 | 385 | 6 | 365 | 4.94e-18 | 86.3 |
MS.gene84247.t1 | AT4G00160 | 27.826 | 460 | 250 | 18 | 9 | 455 | 16 | 406 | 5.12e-18 | 87.0 |
MS.gene84247.t1 | AT5G56400 | 25.745 | 470 | 242 | 21 | 9 | 453 | 33 | 420 | 8.05e-18 | 86.3 |
MS.gene84247.t1 | AT3G58860 | 27.068 | 399 | 230 | 14 | 6 | 390 | 4 | 355 | 8.66e-18 | 86.3 |
MS.gene84247.t1 | AT3G03040 | 26.733 | 404 | 215 | 11 | 9 | 381 | 2 | 355 | 1.65e-17 | 85.5 |
MS.gene84247.t1 | AT3G59200 | 25.167 | 449 | 241 | 13 | 8 | 421 | 6 | 394 | 2.94e-17 | 85.1 |
MS.gene84247.t1 | AT1G52650 | 25.979 | 485 | 249 | 19 | 9 | 453 | 2 | 416 | 4.04e-17 | 84.3 |
MS.gene84247.t1 | AT3G52680 | 26.866 | 469 | 241 | 17 | 9 | 455 | 21 | 409 | 5.61e-17 | 84.0 |
MS.gene84247.t1 | AT2G26030 | 25.106 | 470 | 263 | 18 | 9 | 451 | 4 | 411 | 6.04e-17 | 83.6 |
MS.gene84247.t1 | AT1G78760 | 27.515 | 487 | 240 | 21 | 7 | 461 | 14 | 419 | 7.48e-17 | 83.2 |
MS.gene84247.t1 | AT1G51370 | 26.790 | 433 | 231 | 17 | 7 | 426 | 17 | 376 | 1.06e-16 | 82.8 |
MS.gene84247.t1 | AT3G42770 | 30.606 | 330 | 175 | 13 | 14 | 331 | 4 | 291 | 1.27e-16 | 83.2 |
MS.gene84247.t1 | AT5G56440 | 24.411 | 467 | 270 | 15 | 9 | 458 | 2 | 402 | 2.43e-16 | 81.6 |
MS.gene84247.t1 | AT1G06630 | 27.960 | 397 | 213 | 15 | 8 | 385 | 11 | 353 | 2.73e-16 | 80.9 |
MS.gene84247.t1 | AT1G06630 | 27.960 | 397 | 213 | 15 | 8 | 385 | 11 | 353 | 2.73e-16 | 80.9 |
MS.gene84247.t1 | AT3G58900 | 28.500 | 400 | 218 | 13 | 9 | 383 | 2 | 358 | 3.04e-16 | 81.6 |
MS.gene84247.t1 | AT3G26930 | 26.304 | 460 | 247 | 17 | 8 | 451 | 20 | 403 | 3.87e-16 | 81.3 |
MS.gene84247.t1 | AT2G42720 | 28.979 | 421 | 196 | 19 | 9 | 390 | 2 | 358 | 6.20e-16 | 80.5 |
MS.gene84247.t1 | AT3G59180 | 27.968 | 379 | 212 | 17 | 101 | 436 | 33 | 393 | 8.16e-16 | 80.1 |
MS.gene84247.t1 | AT1G51370 | 31.304 | 230 | 107 | 8 | 7 | 235 | 17 | 196 | 1.02e-15 | 79.0 |
MS.gene84247.t1 | AT5G22670 | 26.819 | 481 | 258 | 21 | 8 | 465 | 10 | 419 | 1.41e-15 | 79.3 |
MS.gene84247.t1 | AT5G56410 | 27.484 | 473 | 280 | 22 | 9 | 467 | 2 | 425 | 1.74e-15 | 79.3 |
MS.gene84247.t1 | AT3G03030 | 28.045 | 353 | 188 | 11 | 9 | 333 | 2 | 316 | 1.77e-15 | 78.2 |
MS.gene84247.t1 | AT4G10420 | 27.606 | 355 | 202 | 13 | 136 | 475 | 1 | 315 | 1.87e-15 | 77.8 |
MS.gene84247.t1 | AT5G53840 | 26.282 | 468 | 247 | 21 | 7 | 453 | 16 | 406 | 2.15e-15 | 79.0 |
MS.gene84247.t1 | AT1G55660 | 27.246 | 334 | 184 | 12 | 9 | 327 | 53 | 342 | 2.35e-15 | 78.2 |
MS.gene84247.t1 | AT2G42730 | 25.910 | 467 | 271 | 16 | 9 | 453 | 5 | 418 | 2.91e-15 | 78.6 |
MS.gene84247.t1 | AT3G26930 | 28.387 | 310 | 178 | 12 | 155 | 451 | 80 | 358 | 7.21e-15 | 77.0 |
MS.gene84247.t1 | AT5G15620 | 27.094 | 406 | 219 | 13 | 9 | 393 | 2 | 351 | 8.60e-15 | 77.0 |
MS.gene84247.t1 | AT3G59240 | 25.000 | 392 | 230 | 12 | 9 | 383 | 8 | 352 | 1.13e-14 | 77.0 |
MS.gene84247.t1 | AT2G29930 | 27.960 | 397 | 203 | 16 | 9 | 383 | 12 | 347 | 1.20e-14 | 76.6 |
MS.gene84247.t1 | AT2G29930 | 27.960 | 397 | 203 | 16 | 9 | 383 | 12 | 347 | 1.20e-14 | 76.6 |
MS.gene84247.t1 | AT5G53635 | 25.203 | 492 | 259 | 20 | 11 | 464 | 2 | 422 | 2.68e-14 | 75.5 |
MS.gene84247.t1 | AT5G25860 | 26.829 | 410 | 222 | 17 | 9 | 390 | 12 | 371 | 2.91e-14 | 75.5 |
MS.gene84247.t1 | AT5G27750 | 24.948 | 485 | 259 | 23 | 9 | 453 | 5 | 424 | 5.76e-14 | 74.3 |
MS.gene84247.t1 | AT3G58900 | 29.050 | 358 | 184 | 13 | 9 | 337 | 2 | 318 | 1.74e-13 | 72.0 |
MS.gene84247.t1 | AT3G58900 | 29.050 | 358 | 184 | 13 | 9 | 337 | 2 | 318 | 1.74e-13 | 72.0 |
MS.gene84247.t1 | AT3G58900 | 28.693 | 352 | 187 | 12 | 9 | 335 | 2 | 314 | 1.75e-13 | 71.6 |
MS.gene84247.t1 | AT5G18770 | 24.609 | 512 | 303 | 18 | 9 | 496 | 24 | 476 | 2.06e-13 | 72.8 |
MS.gene84247.t1 | AT5G56700 | 30.226 | 354 | 207 | 16 | 112 | 455 | 29 | 352 | 2.09e-13 | 72.0 |
MS.gene84247.t1 | AT3G54160 | 27.844 | 334 | 202 | 12 | 70 | 383 | 16 | 330 | 6.71e-13 | 70.9 |
MS.gene84247.t1 | AT1G13780 | 23.890 | 473 | 268 | 20 | 9 | 451 | 10 | 420 | 1.02e-12 | 70.5 |
MS.gene84247.t1 | AT3G26920 | 24.242 | 363 | 234 | 12 | 128 | 477 | 4 | 338 | 1.28e-12 | 69.3 |
MS.gene84247.t1 | AT3G26920 | 24.242 | 363 | 234 | 12 | 128 | 477 | 4 | 338 | 1.28e-12 | 69.3 |
MS.gene84247.t1 | AT1G78750 | 25.373 | 402 | 224 | 16 | 9 | 384 | 18 | 369 | 1.32e-12 | 70.1 |
MS.gene84247.t1 | AT1G78750 | 25.373 | 402 | 224 | 16 | 9 | 384 | 18 | 369 | 1.32e-12 | 70.1 |
MS.gene84247.t1 | AT1G66310 | 25.709 | 494 | 273 | 21 | 4 | 475 | 14 | 435 | 1.36e-12 | 70.1 |
MS.gene84247.t1 | AT5G38392 | 30.508 | 236 | 119 | 7 | 9 | 236 | 2 | 200 | 2.16e-12 | 67.0 |
MS.gene84247.t1 | AT5G56820 | 23.045 | 486 | 278 | 17 | 9 | 484 | 15 | 414 | 2.30e-12 | 69.3 |
MS.gene84247.t1 | AT1G48400 | 24.943 | 437 | 221 | 14 | 9 | 390 | 10 | 394 | 3.39e-12 | 68.9 |
MS.gene84247.t1 | AT5G22700 | 25.052 | 479 | 246 | 21 | 7 | 450 | 4 | 404 | 4.16e-12 | 68.6 |
MS.gene84247.t1 | AT5G22700 | 25.052 | 479 | 246 | 21 | 7 | 450 | 4 | 404 | 4.16e-12 | 68.6 |
MS.gene84247.t1 | AT5G22700 | 25.052 | 479 | 246 | 21 | 7 | 450 | 4 | 404 | 4.16e-12 | 68.6 |
MS.gene84247.t1 | AT5G22700 | 25.052 | 479 | 246 | 21 | 7 | 450 | 4 | 404 | 4.16e-12 | 68.6 |
MS.gene84247.t1 | AT1G05080 | 26.767 | 467 | 251 | 21 | 8 | 453 | 12 | 408 | 5.00e-12 | 68.2 |
MS.gene84247.t1 | AT5G35995 | 24.755 | 408 | 225 | 16 | 8 | 390 | 4 | 354 | 6.10e-12 | 68.2 |
MS.gene84247.t1 | AT5G35995 | 24.755 | 408 | 225 | 16 | 8 | 390 | 4 | 354 | 6.10e-12 | 68.2 |
MS.gene84247.t1 | AT5G22700 | 24.740 | 481 | 245 | 21 | 7 | 450 | 41 | 441 | 7.93e-12 | 67.8 |
MS.gene84247.t1 | AT4G09920 | 26.364 | 330 | 187 | 11 | 9 | 332 | 2 | 281 | 9.15e-12 | 66.6 |
MS.gene84247.t1 | AT4G09920 | 26.364 | 330 | 187 | 11 | 9 | 332 | 2 | 281 | 9.15e-12 | 66.6 |
MS.gene84247.t1 | AT2G29930 | 33.745 | 243 | 109 | 13 | 163 | 383 | 15 | 227 | 1.09e-11 | 66.6 |
MS.gene84247.t1 | AT5G56390 | 25.182 | 413 | 250 | 15 | 64 | 456 | 22 | 395 | 1.45e-11 | 67.0 |
MS.gene84247.t1 | AT4G09920 | 26.140 | 329 | 187 | 10 | 9 | 331 | 2 | 280 | 3.75e-11 | 64.3 |
MS.gene84247.t1 | AT4G09920 | 26.140 | 329 | 187 | 10 | 9 | 331 | 2 | 280 | 3.75e-11 | 64.3 |
MS.gene84247.t1 | AT4G09920 | 26.140 | 329 | 187 | 10 | 9 | 331 | 2 | 280 | 3.75e-11 | 64.3 |
Find 94 sgRNAs with CRISPR-Local
Find 129 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCATTACATTTGAATTTAA+AGG | 0.124626 | 4.1:+42259354 | MS.gene84247:CDS |
TAAAGATTTGATTTCTTCTT+TGG | 0.180797 | 4.1:-42257875 | None:intergenic |
AGAAATCCTCCTTACTAGTA+TGG | 0.246783 | 4.1:+42259511 | MS.gene84247:CDS |
CTAAGGCTTGATAGCGAAAA+AGG | 0.263082 | 4.1:+42258045 | MS.gene84247:CDS |
ATTGCAAGATCCTTAAGTTT+TGG | 0.285282 | 4.1:-42258905 | None:intergenic |
CTATATTCTCGTAGCGTCTT+TGG | 0.295013 | 4.1:-42257909 | None:intergenic |
TTGTTATATATGCCTACTTC+TGG | 0.297421 | 4.1:+42258441 | MS.gene84247:CDS |
GCAGATCGACTCCCATCTTT+TGG | 0.302315 | 4.1:-42257797 | None:intergenic |
TCTATCTGGTTGTCCACATT+TGG | 0.307537 | 4.1:+42258344 | MS.gene84247:CDS |
TAATTCAATTGAAGATCATT+TGG | 0.321337 | 4.1:+42259903 | MS.gene84247:CDS |
AGTGGTCTTCATTGAAATCT+TGG | 0.325383 | 4.1:-42259932 | None:intergenic |
TATATTCTCGTAGCGTCTTT+GGG | 0.345443 | 4.1:-42257908 | None:intergenic |
GTTTCCAACCTCCTCTCTTC+GGG | 0.354469 | 4.1:-42259283 | None:intergenic |
AGTTTCCAACCTCCTCTCTT+CGG | 0.390900 | 4.1:-42259284 | None:intergenic |
ACTCGTGGTCTTAAAATTGC+GGG | 0.408358 | 4.1:+42258194 | MS.gene84247:CDS |
AAAGTGAAGGTTGGGAATCT+TGG | 0.417455 | 4.1:-42257821 | None:intergenic |
ACAGATCCAAGTCAAGTTCC+TGG | 0.422138 | 4.1:-42258122 | None:intergenic |
ACAGAATGCTCCAAAACTTA+AGG | 0.424972 | 4.1:+42258895 | MS.gene84247:CDS |
ATCTGGTTGTCCACATTTGG+AGG | 0.433975 | 4.1:+42258347 | MS.gene84247:CDS |
CAAAGACGCTACGAGAATAT+AGG | 0.436114 | 4.1:+42257910 | MS.gene84247:CDS |
AGGAGGTTGGAAACTCTAGA+TGG | 0.436425 | 4.1:+42259292 | MS.gene84247:CDS |
GGTAATTGAAAGTGAAGGTT+GGG | 0.443422 | 4.1:-42257829 | None:intergenic |
CAAGGTCCAGGAACTTGACT+TGG | 0.457085 | 4.1:+42258116 | MS.gene84247:CDS |
ATTTCTTCTTTGGACATCAC+GGG | 0.458271 | 4.1:-42257865 | None:intergenic |
ACTAATACTTGACAGTAAGA+TGG | 0.466673 | 4.1:+42257936 | MS.gene84247:CDS |
AAATTCAAATGTAATGAGAC+TGG | 0.466724 | 4.1:-42259349 | None:intergenic |
CATGTGTTATATCCAAAAGA+TGG | 0.466985 | 4.1:+42257785 | MS.gene84247:CDS |
GTGACTCACACGTGGAAAGC+TGG | 0.470578 | 4.1:-42258173 | None:intergenic |
TCAAAACATTAAAACTGAGT+TGG | 0.477665 | 4.1:+42259380 | MS.gene84247:CDS |
GTATACAAATTGTTAAAATC+CGG | 0.478212 | 4.1:-42258603 | None:intergenic |
TCTTTGCATTTGCAAGCGTC+CGG | 0.481989 | 4.1:+42258584 | MS.gene84247:CDS |
AAGGATCTTGCAATTGCGGT+TGG | 0.485603 | 4.1:+42258914 | MS.gene84247:CDS |
GCCACAGGATGTACACTTGT+GGG | 0.489030 | 4.1:+42257966 | MS.gene84247:CDS |
TGTACACTTGTGGGTTTCAA+AGG | 0.490992 | 4.1:+42257975 | MS.gene84247:CDS |
AAGTAGGCATATATAACAAA+AGG | 0.493857 | 4.1:-42258437 | None:intergenic |
ACTTAAGGATCTTGCAATTG+CGG | 0.496044 | 4.1:+42258910 | MS.gene84247:CDS |
GGCATTAGATCTCAAGGTCC+AGG | 0.496808 | 4.1:+42258104 | MS.gene84247:CDS |
AATTTGTATACACTCTTGAA+AGG | 0.500652 | 4.1:+42258615 | MS.gene84247:CDS |
CTAATACTTGACAGTAAGAT+GGG | 0.504263 | 4.1:+42257937 | MS.gene84247:CDS |
TAGAATACGCCACAGTTTCA+CGG | 0.516230 | 4.1:-42258284 | None:intergenic |
GAAATCCTCCTTACTAGTAT+GGG | 0.519980 | 4.1:+42259512 | MS.gene84247:CDS |
ACTTCGTACCCATACTAGTA+AGG | 0.520038 | 4.1:-42259520 | None:intergenic |
CTGAAAATATAAGAAAACTA+AGG | 0.523473 | 4.1:+42258028 | MS.gene84247:CDS |
TCTCTTCAATAAGTGAAAAG+AGG | 0.524063 | 4.1:-42258409 | None:intergenic |
ATCACGGGGTCTGAAATCTC+TGG | 0.527272 | 4.1:-42257850 | None:intergenic |
TGTACACATGTGGGTTTCAA+AGG | 0.528762 | 4.1:+42258083 | MS.gene84247:CDS |
TAAGATGGGCTGCCAGCCAC+AGG | 0.529933 | 4.1:+42257951 | MS.gene84247:CDS |
GATTTCTTCTTTGGACATCA+CGG | 0.535967 | 4.1:-42257866 | None:intergenic |
TATGAAGAACTTCAAGTGAC+GGG | 0.536432 | 4.1:-42258494 | None:intergenic |
CACTCGTGGTCTTAAAATTG+CGG | 0.539007 | 4.1:+42258193 | MS.gene84247:CDS |
TTCAAAGGCATTAGATCTCA+AGG | 0.542872 | 4.1:+42258098 | MS.gene84247:CDS |
GGTCTTCATTGAAATCTTGG+AGG | 0.543456 | 4.1:-42259929 | None:intergenic |
AATGTCAAAACATTGGCTCT+CGG | 0.545588 | 4.1:+42258645 | MS.gene84247:CDS |
TGGTAATTGAAAGTGAAGGT+TGG | 0.551378 | 4.1:-42257830 | None:intergenic |
AAATATCTGAGAATTGCTGT+TGG | 0.552790 | 4.1:+42258852 | MS.gene84247:CDS |
TGTTATGCAGTTTCTCAGCA+TGG | 0.553413 | 4.1:+42258769 | MS.gene84247:intron |
TGAAATCAATTCCCGAAGAG+AGG | 0.556742 | 4.1:+42259272 | MS.gene84247:CDS |
ATGTGTTATATCCAAAAGAT+GGG | 0.565832 | 4.1:+42257786 | MS.gene84247:CDS |
GACGGGGCATTAATTTGTAG+TGG | 0.566180 | 4.1:-42258477 | None:intergenic |
ACTTTCTAATGTCAAAACAT+TGG | 0.567332 | 4.1:+42258638 | MS.gene84247:CDS |
TGAAAAGAAGAATTGAGTGT+TGG | 0.588267 | 4.1:-42258228 | None:intergenic |
AGACTGGTTGTAAGACATGC+CGG | 0.589947 | 4.1:-42259333 | None:intergenic |
AAGTGAAAAGAGGTGTTGAT+CGG | 0.590271 | 4.1:-42258399 | None:intergenic |
AAGAGCAGCTTCATCAAGAG+TGG | 0.591791 | 4.1:-42258565 | None:intergenic |
CAACACTTAATACCAGAAGT+AGG | 0.593620 | 4.1:-42258453 | None:intergenic |
GGTGGAGCCATCAGTAACTC+CGG | 0.595318 | 4.1:+42259314 | MS.gene84247:CDS |
AGCCACAGGATGTACACTTG+TGG | 0.597524 | 4.1:+42257965 | MS.gene84247:CDS |
TCACACGTGGAAAGCTGGAG+CGG | 0.598731 | 4.1:-42258168 | None:intergenic |
AAAAGAAGTTCCTCCAAATG+TGG | 0.603065 | 4.1:-42258357 | None:intergenic |
ATATGAAGAACTTCAAGTGA+CGG | 0.606749 | 4.1:-42258495 | None:intergenic |
AATTCCCGAAGAGAGGAGGT+TGG | 0.607635 | 4.1:+42259279 | MS.gene84247:CDS |
ACAAGTGTACATCCTGTGGC+TGG | 0.607923 | 4.1:-42257963 | None:intergenic |
AGACATGCCGGAGTTACTGA+TGG | 0.614504 | 4.1:-42259321 | None:intergenic |
GGAGGTTGGAAACTCTAGAT+GGG | 0.616468 | 4.1:+42259293 | MS.gene84247:CDS |
TCACTCAAGTAAGTTACAGA+AGG | 0.626299 | 4.1:+42259425 | MS.gene84247:CDS |
TCTTCATCTCCGTGAAACTG+TGG | 0.632446 | 4.1:+42258275 | MS.gene84247:CDS |
AATCAATTCCCGAAGAGAGG+AGG | 0.632647 | 4.1:+42259275 | MS.gene84247:CDS |
TTCCACGTGTGAGTCACTCG+TGG | 0.634670 | 4.1:+42258179 | MS.gene84247:CDS |
GGTTGGAAACTCTAGATGGG+TGG | 0.637888 | 4.1:+42259296 | MS.gene84247:CDS |
GGTGTTGATCGGTAATGCAA+AGG | 0.638827 | 4.1:-42258388 | None:intergenic |
GCGTATTCTATGTTTGATGA+CGG | 0.640607 | 4.1:+42258297 | MS.gene84247:CDS |
AGATGAAGAATCTTTAGTAA+CGG | 0.643965 | 4.1:-42258261 | None:intergenic |
ACATGTGTACATCATGTGAC+TGG | 0.652666 | 4.1:-42258071 | None:intergenic |
GCTAGATTAAGAGGGTTGAG+TGG | 0.662472 | 4.1:-42259950 | None:intergenic |
TTTCTTCTTTGGACATCACG+GGG | 0.666222 | 4.1:-42257864 | None:intergenic |
CTCGTGGTCTTAAAATTGCG+GGG | 0.673910 | 4.1:+42258195 | MS.gene84247:CDS |
TCGTACCCATACTAGTAAGG+AGG | 0.674938 | 4.1:-42259517 | None:intergenic |
GTCACATGATGTACACATGT+GGG | 0.678429 | 4.1:+42258074 | MS.gene84247:CDS |
GACCACGAGTGACTCACACG+TGG | 0.682798 | 4.1:-42258181 | None:intergenic |
TCTCTGGTAATTGAAAGTGA+AGG | 0.696256 | 4.1:-42257834 | None:intergenic |
ACCCACAAGTGTACATCCTG+TGG | 0.699104 | 4.1:-42257967 | None:intergenic |
TATGCAGTTTCTCAGCATGG+AGG | 0.703511 | 4.1:+42258772 | MS.gene84247:intron |
AGTCACATGATGTACACATG+TGG | 0.706369 | 4.1:+42258073 | MS.gene84247:CDS |
ATGAAGAACTTCAAGTGACG+GGG | 0.715969 | 4.1:-42258493 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAAATACAAATGTTAATTTT+TGG | + | chr4.1:42259230-42259249 | MS.gene84247:intron | 10.0% |
!!! | GAATTAATTAATTTGTTTAA+CGG | - | chr4.1:42259076-42259095 | None:intergenic | 10.0% |
!! | AGATAAAATTGTAAGTAAAA+TGG | - | chr4.1:42259162-42259181 | None:intergenic | 15.0% |
!! | ATGTAATTAAAAAATTTGAG+AGG | - | chr4.1:42259788-42259807 | None:intergenic | 15.0% |
!!! | AATTATTCAATATTTGTTAC+AGG | + | chr4.1:42259876-42259895 | MS.gene84247:intron | 15.0% |
!! | AAGTAAAATGGTTTAAAAGA+AGG | - | chr4.1:42259150-42259169 | None:intergenic | 20.0% |
!! | CTCATTACATTTGAATTTAA+AGG | + | chr4.1:42259354-42259373 | MS.gene84247:CDS | 20.0% |
!! | CTGAAAATATAAGAAAACTA+AGG | + | chr4.1:42258028-42258047 | MS.gene84247:CDS | 20.0% |
!! | GTATACAAATTGTTAAAATC+CGG | - | chr4.1:42258606-42258625 | None:intergenic | 20.0% |
!! | TAATTCAATTGAAGATCATT+TGG | + | chr4.1:42259903-42259922 | MS.gene84247:CDS | 20.0% |
!! | TATATATACAATTACATTCG+TGG | + | chr4.1:42259721-42259740 | MS.gene84247:intron | 20.0% |
!!! | TAAAGATTTGATTTCTTCTT+TGG | - | chr4.1:42257878-42257897 | None:intergenic | 20.0% |
!!! | TTTATGAAGTCATATTTTCT+AGG | - | chr4.1:42258540-42258559 | None:intergenic | 20.0% |
! | AAATTCAAATGTAATGAGAC+TGG | - | chr4.1:42259352-42259371 | None:intergenic | 25.0% |
! | AAGTAGGCATATATAACAAA+AGG | - | chr4.1:42258440-42258459 | None:intergenic | 25.0% |
! | AATGAGAATAGAATTGCATA+TGG | - | chr4.1:42258740-42258759 | None:intergenic | 25.0% |
! | AATTTGTATACACTCTTGAA+AGG | + | chr4.1:42258615-42258634 | MS.gene84247:CDS | 25.0% |
! | ACTATATGCTATATATCAGT+TGG | + | chr4.1:42259207-42259226 | MS.gene84247:intron | 25.0% |
! | ACTTTCTAATGTCAAAACAT+TGG | + | chr4.1:42258638-42258657 | MS.gene84247:CDS | 25.0% |
! | AGATGAAGAATCTTTAGTAA+CGG | - | chr4.1:42258264-42258283 | None:intergenic | 25.0% |
! | ATGAGAATAGAATTGCATAT+GGG | - | chr4.1:42258739-42258758 | None:intergenic | 25.0% |
! | ATGTGTTATATCCAAAAGAT+GGG | + | chr4.1:42257786-42257805 | MS.gene84247:CDS | 25.0% |
! | GGTAGTATGTTAATATTTGT+TGG | + | chr4.1:42259604-42259623 | MS.gene84247:intron | 25.0% |
! | TAAAAGAAGGTTAAATTGCT+AGG | - | chr4.1:42259137-42259156 | None:intergenic | 25.0% |
! | TCAAAACATTAAAACTGAGT+TGG | + | chr4.1:42259380-42259399 | MS.gene84247:CDS | 25.0% |
!! | GAAAGTATATAAACTCTGTA+TGG | - | chr4.1:42259565-42259584 | None:intergenic | 25.0% |
!! | GATCTCAATAATTTTCTATC+TGG | + | chr4.1:42258330-42258349 | MS.gene84247:CDS | 25.0% |
!! | GTATGTTAATATTTGTTGGT+AGG | + | chr4.1:42259608-42259627 | MS.gene84247:intron | 25.0% |
!! | TATAAGACTCTTTTGTTGAT+AGG | - | chr4.1:42257762-42257781 | None:intergenic | 25.0% |
!!! | TAATTTTTGGTTTACATGCA+GGG | + | chr4.1:42259243-42259262 | MS.gene84247:intron | 25.0% |
!!! | TCTGTTTTAATGAAAAGAGT+GGG | + | chr4.1:42259583-42259602 | MS.gene84247:intron | 25.0% |
!!! | TTAATTTTTGGTTTACATGC+AGG | + | chr4.1:42259242-42259261 | MS.gene84247:intron | 25.0% |
!!! | TTCTGTTTTAATGAAAAGAG+TGG | + | chr4.1:42259582-42259601 | MS.gene84247:intron | 25.0% |
AAATATCTGAGAATTGCTGT+TGG | + | chr4.1:42258852-42258871 | MS.gene84247:CDS | 30.0% | |
AACATAAGAAGCTGAAAATC+TGG | + | chr4.1:42258999-42259018 | MS.gene84247:intron | 30.0% | |
AAGACCTAGTAAAAGATACA+TGG | + | chr4.1:42259035-42259054 | MS.gene84247:intron | 30.0% | |
AAGAGAAGATGAAAGTTCTA+TGG | - | chr4.1:42259648-42259667 | None:intergenic | 30.0% | |
ACTAATACTTGACAGTAAGA+TGG | + | chr4.1:42257936-42257955 | MS.gene84247:CDS | 30.0% | |
AGTAGAAAAAAGTTTACGCA+AGG | + | chr4.1:42259482-42259501 | MS.gene84247:CDS | 30.0% | |
ATATGAAGAACTTCAAGTGA+CGG | - | chr4.1:42258498-42258517 | None:intergenic | 30.0% | |
CATGTGTTATATCCAAAAGA+TGG | + | chr4.1:42257785-42257804 | MS.gene84247:CDS | 30.0% | |
CTAATACTTGACAGTAAGAT+GGG | + | chr4.1:42257937-42257956 | MS.gene84247:CDS | 30.0% | |
GTAGAAAAAAGTTTACGCAA+GGG | + | chr4.1:42259483-42259502 | MS.gene84247:CDS | 30.0% | |
TAGAAAAAAGTTTACGCAAG+GGG | + | chr4.1:42259484-42259503 | MS.gene84247:CDS | 30.0% | |
TCTCTTCAATAAGTGAAAAG+AGG | - | chr4.1:42258412-42258431 | None:intergenic | 30.0% | |
TGAAAAGAAGAATTGAGTGT+TGG | - | chr4.1:42258231-42258250 | None:intergenic | 30.0% | |
TTGTTATATATGCCTACTTC+TGG | + | chr4.1:42258441-42258460 | MS.gene84247:CDS | 30.0% | |
! | AACTCCATGTATCTTTTACT+AGG | - | chr4.1:42259042-42259061 | None:intergenic | 30.0% |
! | ATTGCAAGATCCTTAAGTTT+TGG | - | chr4.1:42258908-42258927 | None:intergenic | 30.0% |
AAAAGAAGTTCCTCCAAATG+TGG | - | chr4.1:42258360-42258379 | None:intergenic | 35.0% | |
AAGACATAAAGCTGTGTTGA+TGG | - | chr4.1:42259694-42259713 | None:intergenic | 35.0% | |
ACAGAATGCTCCAAAACTTA+AGG | + | chr4.1:42258895-42258914 | MS.gene84247:CDS | 35.0% | |
ACTTAAGGATCTTGCAATTG+CGG | + | chr4.1:42258910-42258929 | MS.gene84247:CDS | 35.0% | |
AGAAATCCTCCTTACTAGTA+TGG | + | chr4.1:42259511-42259530 | MS.gene84247:CDS | 35.0% | |
AGTGGTCTTCATTGAAATCT+TGG | - | chr4.1:42259935-42259954 | None:intergenic | 35.0% | |
ATTTCTTCTTTGGACATCAC+GGG | - | chr4.1:42257868-42257887 | None:intergenic | 35.0% | |
CAACACTTAATACCAGAAGT+AGG | - | chr4.1:42258456-42258475 | None:intergenic | 35.0% | |
GAAATCCTCCTTACTAGTAT+GGG | + | chr4.1:42259512-42259531 | MS.gene84247:CDS | 35.0% | |
GATTTCTTCTTTGGACATCA+CGG | - | chr4.1:42257869-42257888 | None:intergenic | 35.0% | |
GCGTATTCTATGTTTGATGA+CGG | + | chr4.1:42258297-42258316 | MS.gene84247:CDS | 35.0% | |
GGTAATTGAAAGTGAAGGTT+GGG | - | chr4.1:42257832-42257851 | None:intergenic | 35.0% | |
TATATTCTCGTAGCGTCTTT+GGG | - | chr4.1:42257911-42257930 | None:intergenic | 35.0% | |
TATGAAGAACTTCAAGTGAC+GGG | - | chr4.1:42258497-42258516 | None:intergenic | 35.0% | |
TCACTCAAGTAAGTTACAGA+AGG | + | chr4.1:42259425-42259444 | MS.gene84247:CDS | 35.0% | |
TCTCTGGTAATTGAAAGTGA+AGG | - | chr4.1:42257837-42257856 | None:intergenic | 35.0% | |
TGCATATGGGAGACTAAATA+TGG | - | chr4.1:42258726-42258745 | None:intergenic | 35.0% | |
TGGTAATTGAAAGTGAAGGT+TGG | - | chr4.1:42257833-42257852 | None:intergenic | 35.0% | |
! | ATTTGTTGGTAGGATGTTGT+GGG | + | chr4.1:42259618-42259637 | MS.gene84247:intron | 35.0% |
! | TATTTGTTGGTAGGATGTTG+TGG | + | chr4.1:42259617-42259636 | MS.gene84247:intron | 35.0% |
!! | AAGTGAAAAGAGGTGTTGAT+CGG | - | chr4.1:42258402-42258421 | None:intergenic | 35.0% |
!! | AATGTCAAAACATTGGCTCT+CGG | + | chr4.1:42258645-42258664 | MS.gene84247:CDS | 35.0% |
!! | TTCAAAGGCATTAGATCTCA+AGG | + | chr4.1:42258098-42258117 | MS.gene84247:CDS | 35.0% |
!!! | GCGGCAATAAAACTTTTTCA+TGG | - | chr4.1:42258152-42258171 | None:intergenic | 35.0% |
AAAGTGAAGGTTGGGAATCT+TGG | - | chr4.1:42257824-42257843 | None:intergenic | 40.0% | |
ACATGTGTACATCATGTGAC+TGG | - | chr4.1:42258074-42258093 | None:intergenic | 40.0% | |
ACTTCGTACCCATACTAGTA+AGG | - | chr4.1:42259523-42259542 | None:intergenic | 40.0% | |
AGTCACATGATGTACACATG+TGG | + | chr4.1:42258073-42258092 | MS.gene84247:CDS | 40.0% | |
ATGAAGAACTTCAAGTGACG+GGG | - | chr4.1:42258496-42258515 | None:intergenic | 40.0% | |
CAAAGACGCTACGAGAATAT+AGG | + | chr4.1:42257910-42257929 | MS.gene84247:CDS | 40.0% | |
CTATATTCTCGTAGCGTCTT+TGG | - | chr4.1:42257912-42257931 | None:intergenic | 40.0% | |
GGTCTTCATTGAAATCTTGG+AGG | - | chr4.1:42259932-42259951 | None:intergenic | 40.0% | |
GTCACATGATGTACACATGT+GGG | + | chr4.1:42258074-42258093 | MS.gene84247:CDS | 40.0% | |
TAGAATACGCCACAGTTTCA+CGG | - | chr4.1:42258287-42258306 | None:intergenic | 40.0% | |
TCTATCTGGTTGTCCACATT+TGG | + | chr4.1:42258344-42258363 | MS.gene84247:CDS | 40.0% | |
TGAAATCAATTCCCGAAGAG+AGG | + | chr4.1:42259272-42259291 | MS.gene84247:CDS | 40.0% | |
TGTACACATGTGGGTTTCAA+AGG | + | chr4.1:42258083-42258102 | MS.gene84247:CDS | 40.0% | |
TGTACACTTGTGGGTTTCAA+AGG | + | chr4.1:42257975-42257994 | MS.gene84247:CDS | 40.0% | |
TGTTATGCAGTTTCTCAGCA+TGG | + | chr4.1:42258769-42258788 | MS.gene84247:intron | 40.0% | |
TTTCTTCTTTGGACATCACG+GGG | - | chr4.1:42257867-42257886 | None:intergenic | 40.0% | |
! | ACTCGTGGTCTTAAAATTGC+GGG | + | chr4.1:42258194-42258213 | MS.gene84247:CDS | 40.0% |
! | CACTCGTGGTCTTAAAATTG+CGG | + | chr4.1:42258193-42258212 | MS.gene84247:CDS | 40.0% |
! | TTTGTTGGTAGGATGTTGTG+GGG | + | chr4.1:42259619-42259638 | MS.gene84247:intron | 40.0% |
!! | CATAAAGCTGTGTTGATGGT+CGG | - | chr4.1:42259690-42259709 | None:intergenic | 40.0% |
!! | CTAAGGCTTGATAGCGAAAA+AGG | + | chr4.1:42258045-42258064 | MS.gene84247:CDS | 40.0% |
AAGAGCAGCTTCATCAAGAG+TGG | - | chr4.1:42258568-42258587 | None:intergenic | 45.0% | |
AAGGATCTTGCAATTGCGGT+TGG | + | chr4.1:42258914-42258933 | MS.gene84247:CDS | 45.0% | |
AATCAATTCCCGAAGAGAGG+AGG | + | chr4.1:42259275-42259294 | MS.gene84247:CDS | 45.0% | |
ACAGATCCAAGTCAAGTTCC+TGG | - | chr4.1:42258125-42258144 | None:intergenic | 45.0% | |
AGGAGGTTGGAAACTCTAGA+TGG | + | chr4.1:42259292-42259311 | MS.gene84247:CDS | 45.0% | |
AGTTTCCAACCTCCTCTCTT+CGG | - | chr4.1:42259287-42259306 | None:intergenic | 45.0% | |
ATCTGGTTGTCCACATTTGG+AGG | + | chr4.1:42258347-42258366 | MS.gene84247:CDS | 45.0% | |
GGAGGTTGGAAACTCTAGAT+GGG | + | chr4.1:42259293-42259312 | MS.gene84247:CDS | 45.0% | |
TATGCAGTTTCTCAGCATGG+AGG | + | chr4.1:42258772-42258791 | MS.gene84247:intron | 45.0% | |
TCGTACCCATACTAGTAAGG+AGG | - | chr4.1:42259520-42259539 | None:intergenic | 45.0% | |
TCTTCATCTCCGTGAAACTG+TGG | + | chr4.1:42258275-42258294 | MS.gene84247:CDS | 45.0% | |
TCTTTGCATTTGCAAGCGTC+CGG | + | chr4.1:42258584-42258603 | MS.gene84247:CDS | 45.0% | |
! | AGACTGGTTGTAAGACATGC+CGG | - | chr4.1:42259336-42259355 | None:intergenic | 45.0% |
! | CTCGTGGTCTTAAAATTGCG+GGG | + | chr4.1:42258195-42258214 | MS.gene84247:CDS | 45.0% |
!! | GACGGGGCATTAATTTGTAG+TGG | - | chr4.1:42258480-42258499 | None:intergenic | 45.0% |
!! | GGTGTTGATCGGTAATGCAA+AGG | - | chr4.1:42258391-42258410 | None:intergenic | 45.0% |
AATTCCCGAAGAGAGGAGGT+TGG | + | chr4.1:42259279-42259298 | MS.gene84247:CDS | 50.0% | |
ACAAGTGTACATCCTGTGGC+TGG | - | chr4.1:42257966-42257985 | None:intergenic | 50.0% | |
ACCCACAAGTGTACATCCTG+TGG | - | chr4.1:42257970-42257989 | None:intergenic | 50.0% | |
AGACATGCCGGAGTTACTGA+TGG | - | chr4.1:42259324-42259343 | None:intergenic | 50.0% | |
AGCCACAGGATGTACACTTG+TGG | + | chr4.1:42257965-42257984 | MS.gene84247:CDS | 50.0% | |
CAAGGTCCAGGAACTTGACT+TGG | + | chr4.1:42258116-42258135 | MS.gene84247:CDS | 50.0% | |
GCCACAGGATGTACACTTGT+GGG | + | chr4.1:42257966-42257985 | MS.gene84247:CDS | 50.0% | |
GGCATTAGATCTCAAGGTCC+AGG | + | chr4.1:42258104-42258123 | MS.gene84247:CDS | 50.0% | |
GGTTGGAAACTCTAGATGGG+TGG | + | chr4.1:42259296-42259315 | MS.gene84247:CDS | 50.0% | |
GTTTCCAACCTCCTCTCTTC+GGG | - | chr4.1:42259286-42259305 | None:intergenic | 50.0% | |
! | ATCACGGGGTCTGAAATCTC+TGG | - | chr4.1:42257853-42257872 | None:intergenic | 50.0% |
!! | GCAGATCGACTCCCATCTTT+TGG | - | chr4.1:42257800-42257819 | None:intergenic | 50.0% |
GGTGGAGCCATCAGTAACTC+CGG | + | chr4.1:42259314-42259333 | MS.gene84247:CDS | 55.0% | |
GTGACTCACACGTGGAAAGC+TGG | - | chr4.1:42258176-42258195 | None:intergenic | 55.0% | |
TCACACGTGGAAAGCTGGAG+CGG | - | chr4.1:42258171-42258190 | None:intergenic | 55.0% | |
TTCCACGTGTGAGTCACTCG+TGG | + | chr4.1:42258179-42258198 | MS.gene84247:CDS | 55.0% | |
! | GTTGGTAGGATGTTGTGGGG+TGG | + | chr4.1:42259622-42259641 | MS.gene84247:intron | 55.0% |
GACCACGAGTGACTCACACG+TGG | - | chr4.1:42258184-42258203 | None:intergenic | 60.0% | |
!! | TAAGATGGGCTGCCAGCCAC+AGG | + | chr4.1:42257951-42257970 | MS.gene84247:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 42257685 | 42259966 | 42257685 | ID=MS.gene84247 |
chr4.1 | mRNA | 42257685 | 42259966 | 42257685 | ID=MS.gene84247.t1;Parent=MS.gene84247 |
chr4.1 | exon | 42257685 | 42258683 | 42257685 | ID=MS.gene84247.t1.exon1;Parent=MS.gene84247.t1 |
chr4.1 | CDS | 42257685 | 42258683 | 42257685 | ID=cds.MS.gene84247.t1;Parent=MS.gene84247.t1 |
chr4.1 | exon | 42258779 | 42258946 | 42258779 | ID=MS.gene84247.t1.exon2;Parent=MS.gene84247.t1 |
chr4.1 | CDS | 42258779 | 42258946 | 42258779 | ID=cds.MS.gene84247.t1;Parent=MS.gene84247.t1 |
chr4.1 | exon | 42259264 | 42259533 | 42259264 | ID=MS.gene84247.t1.exon3;Parent=MS.gene84247.t1 |
chr4.1 | CDS | 42259264 | 42259533 | 42259264 | ID=cds.MS.gene84247.t1;Parent=MS.gene84247.t1 |
chr4.1 | exon | 42259898 | 42259966 | 42259898 | ID=MS.gene84247.t1.exon4;Parent=MS.gene84247.t1 |
chr4.1 | CDS | 42259898 | 42259966 | 42259898 | ID=cds.MS.gene84247.t1;Parent=MS.gene84247.t1 |
Gene Sequence |
Protein sequence |