AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene09992


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene09992.t1 MTR_4g056040 60.759 474 147 6 1 439 1 470 0.0 530
MS.gene09992.t1 MTR_1g038710 65.471 446 139 7 1 436 11 451 3.44e-180 511
MS.gene09992.t1 MTR_4g056020 61.678 441 160 5 1 436 1 437 5.44e-176 500
MS.gene09992.t1 MTR_4g056030 61.451 441 161 5 1 436 1 437 4.82e-174 496
MS.gene09992.t1 MTR_1g090883 70.857 350 98 2 2 351 12 357 3.42e-170 482
MS.gene09992.t1 MTR_4g055990 56.936 483 157 8 1 436 1 479 6.05e-164 471
MS.gene09992.t1 MTR_4g055990 56.936 483 157 8 1 436 1 479 6.91e-164 471
MS.gene09992.t1 MTR_4g055580 57.531 478 156 7 1 436 92 564 1.13e-160 466
MS.gene09992.t1 MTR_4g056070 57.823 441 138 6 1 397 1 437 2.76e-156 449
MS.gene09992.t1 MTR_1g090900 88.764 178 20 0 1 178 1 178 1.70e-108 319
MS.gene09992.t1 MTR_7g110920 53.482 359 105 6 101 436 1 320 3.94e-107 320
MS.gene09992.t1 MTR_4g093690 57.040 277 100 11 1 270 10 274 7.15e-80 248
MS.gene09992.t1 MTR_4g056020 63.121 141 47 2 301 436 1 141 5.20e-51 170
MS.gene09992.t1 MTR_4g056010 68.817 93 28 1 75 167 6 97 1.06e-32 119
MS.gene09992.t1 MTR_5g084070 29.412 425 267 12 4 421 6 404 6.90e-30 120
MS.gene09992.t1 MTR_1g090890 64.634 82 27 1 355 436 37 116 4.93e-27 105
MS.gene09992.t1 MTR_5g080710 29.187 418 267 11 7 416 29 425 1.24e-25 108
MS.gene09992.t1 MTR_3g108560 30.807 409 209 15 8 411 17 356 2.68e-25 107
MS.gene09992.t1 MTR_8g445780 28.087 413 238 15 9 396 11 389 3.65e-25 107
MS.gene09992.t1 MTR_8g014260 26.790 433 265 15 8 413 13 420 2.51e-23 102
MS.gene09992.t1 MTR_8g467800 29.977 427 240 17 5 400 14 412 3.29e-22 99.0
MS.gene09992.t1 MTR_7g115270 28.329 413 231 14 10 411 11 369 1.04e-21 97.1
MS.gene09992.t1 MTR_4g080590 25.708 424 269 14 10 412 22 420 1.06e-21 97.4
MS.gene09992.t1 MTR_4g032730 27.191 445 257 17 11 411 15 436 1.70e-21 97.1
MS.gene09992.t1 MTR_1g041245 25.721 416 222 11 11 411 11 354 2.22e-21 95.9
MS.gene09992.t1 MTR_7g007080 27.830 424 215 15 9 412 2 354 4.87e-21 94.7
MS.gene09992.t1 MTR_4g039440 27.251 411 221 17 11 411 34 376 1.47e-20 93.6
MS.gene09992.t1 MTR_2g005990 25.721 451 222 15 11 424 6 380 2.87e-20 92.8
MS.gene09992.t1 MTR_1g085120 27.027 444 208 18 11 423 92 450 3.86e-20 92.8
MS.gene09992.t1 MTR_4g080590 27.671 365 220 12 10 353 22 363 4.73e-20 91.7
MS.gene09992.t1 MTR_1g085120 26.966 445 207 18 11 423 167 525 5.79e-20 92.8
MS.gene09992.t1 MTR_0543s0010 27.407 405 219 13 10 411 85 417 7.33e-20 92.0
MS.gene09992.t1 MTR_0492s0020 27.407 405 219 14 10 411 85 417 7.92e-20 91.7
MS.gene09992.t1 MTR_3g023630 26.585 410 220 13 11 411 8 345 1.69e-19 90.1
MS.gene09992.t1 MTR_8g468810 26.959 434 280 16 6 418 20 437 2.69e-19 90.5
MS.gene09992.t1 MTR_6g011460 27.273 418 209 17 11 411 46 385 3.62e-19 89.7
MS.gene09992.t1 MTR_8g468840 27.635 427 265 17 10 411 13 420 6.36e-19 89.0
MS.gene09992.t1 MTR_8g062270 28.082 438 249 18 11 411 16 424 1.49e-18 88.2
MS.gene09992.t1 MTR_2g008320 26.728 434 243 18 3 424 42 412 4.05e-18 86.7
MS.gene09992.t1 MTR_7g056277 26.730 419 225 14 7 416 255 600 4.38e-18 87.0
MS.gene09992.t1 MTR_1g107385 26.374 455 228 15 5 424 26 408 1.50e-17 84.7
MS.gene09992.t1 MTR_3g108150 27.206 408 226 15 10 411 12 354 1.65e-17 84.3
MS.gene09992.t1 MTR_6g022500 26.683 416 217 19 11 411 101 443 7.50e-17 82.8
MS.gene09992.t1 MTR_7g055943 24.368 435 240 15 11 426 40 404 7.63e-17 82.8
MS.gene09992.t1 MTR_1g053025 24.480 433 248 15 11 424 2 374 1.47e-16 81.6
MS.gene09992.t1 MTR_7g056287 26.683 416 221 15 11 416 3 344 1.92e-16 80.9
MS.gene09992.t1 MTR_8g467800 30.548 347 195 15 5 332 14 333 2.12e-16 80.5
MS.gene09992.t1 MTR_3g108560 30.966 352 169 15 8 354 17 299 2.40e-16 80.1
MS.gene09992.t1 MTR_2g007450 24.342 456 247 18 6 424 11 405 3.15e-16 80.9
MS.gene09992.t1 MTR_3g107160 24.038 416 242 13 6 411 5 356 5.38e-16 79.7
MS.gene09992.t1 MTR_2g083840 26.190 420 273 13 11 411 21 422 7.68e-16 79.7
MS.gene09992.t1 MTR_5g039950 25.899 417 243 14 10 411 22 387 1.05e-15 79.0
MS.gene09992.t1 MTR_3g107100 25.761 427 238 18 1 415 1 360 1.18e-15 79.0
MS.gene09992.t1 MTR_8g058970 25.561 446 277 13 5 411 13 442 1.72e-15 79.0
MS.gene09992.t1 MTR_3g087260 26.998 463 240 17 9 416 10 429 2.52e-15 78.2
MS.gene09992.t1 MTR_1g085120 27.467 375 156 17 11 353 179 469 3.74e-15 77.8
MS.gene09992.t1 MTR_3g099900 26.946 334 206 14 10 325 17 330 4.12e-15 77.0
MS.gene09992.t1 MTR_7g034115 35.979 189 108 6 11 195 11 190 8.92e-15 75.9
MS.gene09992.t1 MTR_3g109982 27.451 459 246 18 6 406 8 437 9.96e-15 77.0
MS.gene09992.t1 MTR_3g048290 26.168 428 279 14 7 411 19 432 1.03e-14 76.3
MS.gene09992.t1 MTR_4g050930 27.434 339 212 10 4 326 22 342 1.07e-14 75.9
MS.gene09992.t1 MTR_4g050930 27.434 339 212 10 4 326 22 342 1.66e-14 75.9
MS.gene09992.t1 MTR_7g032380 30.415 217 130 5 11 222 11 211 1.67e-14 75.1
MS.gene09992.t1 MTR_7g060470 26.047 430 239 17 11 422 3 371 2.09e-14 75.1
MS.gene09992.t1 MTR_2g007500 25.686 401 196 14 11 388 14 335 2.12e-14 74.3
MS.gene09992.t1 MTR_7g023310 22.791 430 285 13 6 411 21 427 3.09e-14 74.7
MS.gene09992.t1 MTR_7g098570 26.341 410 224 14 11 411 20 360 6.16e-14 73.9
MS.gene09992.t1 MTR_4g080773 26.267 434 269 15 11 411 19 434 6.78e-14 73.9
MS.gene09992.t1 MTR_7g033945 33.333 177 103 4 1 167 1 172 8.19e-14 70.1
MS.gene09992.t1 MTR_4g080773 26.267 434 269 15 11 411 19 434 9.22e-14 73.6
MS.gene09992.t1 MTR_2g047848 26.256 438 263 17 6 419 2 403 9.82e-14 73.2
MS.gene09992.t1 MTR_4g130200 25.366 410 231 16 10 412 19 360 1.19e-13 72.8
MS.gene09992.t1 MTR_6g022360 31.120 241 129 11 11 235 43 262 1.64e-13 72.4
MS.gene09992.t1 MTR_5g058100 25.604 414 223 13 11 411 9 350 2.47e-13 71.6
MS.gene09992.t1 MTR_8g066650 25.223 337 218 11 8 328 77 395 2.98e-13 71.6
MS.gene09992.t1 MTR_4g045680 26.923 338 205 13 9 324 14 331 3.97e-13 70.9
MS.gene09992.t1 MTR_7g033990 24.823 423 214 15 11 411 11 351 4.14e-13 71.2
MS.gene09992.t1 MTR_7g056430 27.338 417 206 16 10 416 8 337 6.37e-13 71.6
MS.gene09992.t1 MTR_7g056420 27.338 417 206 16 10 416 8 337 8.32e-13 71.2
MS.gene09992.t1 MTR_2g094750 26.943 386 226 17 8 350 87 459 1.11e-12 70.1
MS.gene09992.t1 MTR_8g085430 28.037 214 132 5 11 212 11 214 1.26e-12 68.9
MS.gene09992.t1 MTR_3g019240 28.319 339 205 12 7 326 22 341 1.86e-12 68.9
MS.gene09992.t1 MTR_4g081030 27.327 333 205 13 10 327 16 326 3.70e-12 68.2
MS.gene09992.t1 MTR_4g024680 32.673 202 95 10 7 201 518 685 4.25e-12 68.9
MS.gene09992.t1 MTR_1g048340 25.146 342 213 11 5 339 10 315 4.39e-12 67.4
MS.gene09992.t1 MTR_5g073420 23.179 453 247 13 1 432 1 373 9.76e-12 66.6
MS.gene09992.t1 MTR_8g469020 25.874 429 275 16 11 412 7 419 1.17e-11 66.6
MS.gene09992.t1 MTR_4g051480 26.239 343 218 11 5 326 19 347 1.17e-11 67.4
MS.gene09992.t1 MTR_7g033915 33.333 153 90 3 1 143 1 151 1.33e-11 66.2
MS.gene09992.t1 MTR_7g056447 35.204 196 108 7 5 194 3 185 1.37e-11 65.5
MS.gene09992.t1 MTR_4g092300 26.239 343 218 11 5 326 19 347 1.56e-11 67.0
MS.gene09992.t1 MTR_3g014590 25.000 332 230 7 1 324 1 321 1.76e-11 65.9
MS.gene09992.t1 MTR_6g025270 24.176 364 237 10 4 346 27 372 1.85e-11 65.9
MS.gene09992.t1 MTR_7g017280 24.866 374 245 14 11 355 148 514 1.94e-11 66.2
MS.gene09992.t1 MTR_8g014160 28.213 319 185 10 6 298 36 336 2.16e-11 65.9
MS.gene09992.t1 MTR_6g022390 44.444 63 35 0 11 73 5 67 2.64e-11 62.0
MS.gene09992.t1 MTR_3g023270 25.146 342 205 12 4 324 5 316 5.30e-11 64.3
MS.gene09992.t1 MTR_7g026500 24.318 440 217 17 5 411 8 364 7.32e-11 63.9
MS.gene09992.t1 MTR_6g088700 25.208 361 240 13 5 352 8 351 7.56e-11 63.9
MS.gene09992.t1 MTR_4g080787 24.065 428 283 15 11 411 19 431 8.36e-11 64.3
MS.gene09992.t1 MTR_4g104300 28.571 210 128 8 1 201 101 297 9.84e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene09992.t1 AT4G26340 29.245 424 260 18 11 422 2 397 6.00e-31 123
MS.gene09992.t1 AT4G14103 28.841 371 217 12 10 353 7 357 1.03e-27 114
MS.gene09992.t1 AT4G14103 28.841 371 217 12 10 353 7 357 1.03e-27 114
MS.gene09992.t1 AT4G10400 29.356 419 236 14 11 411 2 378 1.26e-27 114
MS.gene09992.t1 AT4G10400 29.356 419 236 14 11 411 2 378 1.26e-27 114
MS.gene09992.t1 AT4G10400 29.356 419 236 14 11 411 2 378 1.26e-27 114
MS.gene09992.t1 AT4G14103 29.111 371 216 12 10 353 7 357 1.78e-27 114
MS.gene09992.t1 AT5G56370 29.508 427 252 15 11 424 2 392 3.96e-27 112
MS.gene09992.t1 AT5G56370 29.508 427 252 15 11 424 2 392 3.96e-27 112
MS.gene09992.t1 AT5G56380 28.571 427 252 15 11 409 2 403 1.52e-26 111
MS.gene09992.t1 AT5G56380 28.571 427 252 15 11 409 2 403 1.52e-26 111
MS.gene09992.t1 AT4G00315 28.345 441 252 18 11 416 2 413 1.90e-26 111
MS.gene09992.t1 AT3G59230 27.815 453 257 18 10 412 11 443 4.98e-26 110
MS.gene09992.t1 AT5G56400 28.261 414 258 11 11 411 33 420 1.29e-25 108
MS.gene09992.t1 AT1G55660 27.354 446 250 21 11 416 53 464 1.34e-25 109
MS.gene09992.t1 AT2G04230 28.540 452 265 16 4 430 5 423 1.47e-25 108
MS.gene09992.t1 AT4G26350 27.107 439 259 18 11 422 2 406 1.48e-25 108
MS.gene09992.t1 AT4G14096 26.728 434 264 16 10 412 7 417 1.54e-25 108
MS.gene09992.t1 AT4G14096 26.728 434 264 16 10 412 7 417 1.54e-25 108
MS.gene09992.t1 AT5G60610 28.162 419 249 16 11 411 2 386 7.42e-25 105
MS.gene09992.t1 AT5G60610 28.162 419 249 16 11 411 2 386 7.42e-25 105
MS.gene09992.t1 AT2G26860 28.640 419 259 15 10 411 1 396 9.82e-24 102
MS.gene09992.t1 AT2G26860 28.640 419 259 15 10 411 1 396 9.82e-24 102
MS.gene09992.t1 AT5G56370 30.028 353 203 13 10 353 1 318 2.27e-22 97.8
MS.gene09992.t1 AT1G51370 27.586 435 248 16 3 411 11 404 3.23e-22 99.0
MS.gene09992.t1 AT4G09920 31.731 312 160 10 10 299 1 281 3.66e-22 96.7
MS.gene09992.t1 AT4G09920 31.731 312 160 10 10 299 1 281 3.66e-22 96.7
MS.gene09992.t1 AT4G09920 31.731 312 160 10 10 299 1 281 3.66e-22 96.7
MS.gene09992.t1 AT3G59190 28.267 375 221 10 10 351 11 370 6.73e-22 97.4
MS.gene09992.t1 AT3G59190 28.117 377 223 10 10 353 11 372 8.24e-22 98.2
MS.gene09992.t1 AT3G59210 28.042 378 224 11 7 354 3 362 1.21e-21 97.4
MS.gene09992.t1 AT3G59210 28.042 378 224 11 7 354 3 362 1.21e-21 97.4
MS.gene09992.t1 AT3G59210 28.042 378 224 11 7 354 3 362 1.21e-21 97.4
MS.gene09992.t1 AT3G59210 28.042 378 224 11 7 354 3 362 1.21e-21 97.4
MS.gene09992.t1 AT3G59210 28.042 378 224 11 7 354 3 362 1.21e-21 97.4
MS.gene09992.t1 AT4G09920 31.715 309 158 10 11 297 2 279 1.95e-21 95.1
MS.gene09992.t1 AT4G09920 31.715 309 158 10 11 297 2 279 1.95e-21 95.1
MS.gene09992.t1 AT5G53840 28.916 415 253 15 9 408 16 403 3.08e-21 95.9
MS.gene09992.t1 AT4G00160 27.163 416 267 10 10 413 15 406 3.09e-21 96.3
MS.gene09992.t1 AT5G41840 26.357 387 228 10 11 353 14 387 3.49e-21 96.7
MS.gene09992.t1 AT5G62970 27.039 466 268 19 11 433 2 438 3.53e-21 95.9
MS.gene09992.t1 AT5G56420 26.923 442 251 15 10 426 5 399 3.73e-21 95.5
MS.gene09992.t1 AT5G56420 26.923 442 251 15 10 426 5 399 3.73e-21 95.5
MS.gene09992.t1 AT5G56420 26.923 442 251 15 10 426 5 399 3.73e-21 95.5
MS.gene09992.t1 AT4G00320 26.456 412 248 13 3 378 7 399 5.81e-21 95.5
MS.gene09992.t1 AT5G18770 27.152 453 286 16 8 433 21 456 6.15e-21 95.5
MS.gene09992.t1 AT5G56440 27.869 427 251 16 11 411 2 397 6.27e-21 95.1
MS.gene09992.t1 AT3G26930 28.504 421 259 15 2 409 12 403 6.42e-21 95.1
MS.gene09992.t1 AT3G52680 27.918 437 247 13 10 421 20 413 7.19e-21 95.1
MS.gene09992.t1 AT3G49030 26.730 419 264 15 9 413 19 408 1.60e-20 94.0
MS.gene09992.t1 AT3G59160 25.307 407 231 15 10 360 12 401 1.93e-20 94.0
MS.gene09992.t1 AT5G18780 26.812 414 270 15 10 408 10 405 1.99e-20 93.6
MS.gene09992.t1 AT5G18780 26.812 414 270 15 10 408 10 405 1.99e-20 93.6
MS.gene09992.t1 AT3G50710 27.586 435 258 16 11 421 2 403 2.53e-20 93.2
MS.gene09992.t1 AT5G53635 29.384 422 249 18 13 408 2 400 7.23e-20 91.7
MS.gene09992.t1 AT5G38590 26.415 424 251 14 11 413 2 385 7.32e-20 91.7
MS.gene09992.t1 AT2G42720 28.689 366 220 13 11 353 2 349 8.86e-20 91.7
MS.gene09992.t1 AT5G56410 26.580 459 275 19 11 433 2 434 1.11e-19 91.7
MS.gene09992.t1 AT4G13965 26.879 439 240 19 11 420 10 396 1.22e-19 91.3
MS.gene09992.t1 AT3G59200 27.206 408 232 16 10 375 6 390 1.45e-19 91.7
MS.gene09992.t1 AT1G78760 27.293 447 262 18 9 426 14 426 1.49e-19 91.3
MS.gene09992.t1 AT1G58310 27.293 447 246 17 8 392 5 434 1.91e-19 90.9
MS.gene09992.t1 AT3G59200 27.749 382 213 15 10 351 6 364 3.02e-19 89.4
MS.gene09992.t1 AT1G55660 28.939 311 175 14 10 294 52 342 4.96e-19 88.6
MS.gene09992.t1 AT3G49150 23.908 435 289 13 9 412 14 437 5.82e-19 89.4
MS.gene09992.t1 AT3G58900 26.562 448 260 16 11 413 2 425 7.05e-19 89.0
MS.gene09992.t1 AT2G29930 30.137 365 209 13 10 353 11 350 7.37e-19 89.0
MS.gene09992.t1 AT2G29930 30.137 365 209 13 10 353 11 350 7.37e-19 89.0
MS.gene09992.t1 AT5G44950 27.273 451 254 23 10 421 3 418 7.92e-19 89.0
MS.gene09992.t1 AT3G44060 27.163 416 253 17 16 407 4 393 9.50e-19 88.6
MS.gene09992.t1 AT1G13780 27.356 435 254 18 11 408 10 419 1.15e-18 88.6
MS.gene09992.t1 AT5G41830 26.521 411 247 15 3 378 7 397 1.94e-18 88.2
MS.gene09992.t1 AT3G59170 26.329 414 227 16 10 363 6 401 2.26e-18 87.8
MS.gene09992.t1 AT4G13960 25.885 452 268 17 11 422 2 426 3.56e-18 87.0
MS.gene09992.t1 AT4G13960 25.885 452 268 17 11 422 2 426 3.56e-18 87.0
MS.gene09992.t1 AT1G05080 28.837 430 245 14 10 411 12 408 5.66e-18 86.3
MS.gene09992.t1 AT5G56810 27.295 414 262 13 11 411 15 402 8.07e-18 85.9
MS.gene09992.t1 AT5G38570 25.240 416 244 10 11 422 2 354 8.40e-18 85.1
MS.gene09992.t1 AT3G58960 25.691 362 235 12 11 350 2 351 9.51e-18 85.9
MS.gene09992.t1 AT5G22700 27.640 445 257 18 1 416 28 436 1.05e-17 85.5
MS.gene09992.t1 AT1G51370 27.273 407 230 15 3 384 11 376 1.23e-17 85.1
MS.gene09992.t1 AT4G22280 30.086 349 219 10 10 351 1 331 1.50e-17 84.0
MS.gene09992.t1 AT3G26930 27.720 386 237 15 37 409 2 358 1.52e-17 84.7
MS.gene09992.t1 AT4G22280 29.526 359 228 10 10 361 1 341 1.60e-17 84.7
MS.gene09992.t1 AT3G58860 26.703 367 230 10 8 356 4 349 2.78e-17 84.3
MS.gene09992.t1 AT1G66310 27.655 452 274 16 5 432 13 435 2.92e-17 84.0
MS.gene09992.t1 AT1G51370 28.344 314 172 10 3 298 11 289 3.12e-17 83.2
MS.gene09992.t1 AT5G22670 26.540 422 263 15 10 408 10 407 3.89e-17 83.6
MS.gene09992.t1 AT3G03030 25.132 378 234 10 11 353 2 365 4.46e-17 83.6
MS.gene09992.t1 AT5G22700 27.907 430 250 17 11 416 6 399 4.57e-17 83.6
MS.gene09992.t1 AT5G22700 27.907 430 250 17 11 416 6 399 4.57e-17 83.6
MS.gene09992.t1 AT5G22700 27.907 430 250 17 11 416 6 399 4.57e-17 83.6
MS.gene09992.t1 AT5G22700 27.907 430 250 17 11 416 6 399 4.57e-17 83.6
MS.gene09992.t1 AT4G10420 29.412 323 184 14 101 411 1 291 9.33e-17 81.3
MS.gene09992.t1 AT3G51530 26.977 430 259 16 10 421 29 421 1.58e-16 82.0
MS.gene09992.t1 AT3G59250 24.829 439 262 14 10 426 6 398 1.66e-16 81.6
MS.gene09992.t1 AT3G58880 24.675 462 276 12 11 429 3 435 1.76e-16 81.6
MS.gene09992.t1 AT5G22730 25.708 424 271 12 10 408 27 431 2.05e-16 81.6
MS.gene09992.t1 AT5G22730 25.708 424 271 12 10 408 27 431 2.05e-16 81.6
MS.gene09992.t1 AT3G03040 26.649 379 222 11 11 353 2 360 2.17e-16 81.6
MS.gene09992.t1 AT5G44490 27.815 453 256 21 6 422 12 429 2.26e-16 81.6
MS.gene09992.t1 AT5G44490 27.851 456 258 21 6 425 12 432 3.39e-16 80.9
MS.gene09992.t1 AT2G26030 25.943 424 266 15 11 408 4 405 3.61e-16 80.9
MS.gene09992.t1 AT2G26030 25.943 424 266 15 11 408 4 405 3.61e-16 80.9
MS.gene09992.t1 AT5G22610 28.446 457 265 18 3 433 10 430 4.39e-16 80.5
MS.gene09992.t1 AT5G18770 27.019 359 229 11 8 348 21 364 5.31e-16 79.7
MS.gene09992.t1 AT5G22610 27.660 470 282 18 3 433 10 460 8.10e-16 80.1
MS.gene09992.t1 AT5G18780 26.554 354 231 11 10 350 10 347 1.32e-15 78.6
MS.gene09992.t1 AT5G18780 26.554 354 231 11 10 350 10 347 1.32e-15 78.6
MS.gene09992.t1 AT3G58920 26.190 378 229 12 11 351 2 366 1.35e-15 79.0
MS.gene09992.t1 AT3G62430 27.374 358 230 12 11 353 2 344 1.66e-15 78.6
MS.gene09992.t1 AT1G32375 24.764 424 273 14 11 417 2 396 1.76e-15 78.6
MS.gene09992.t1 AT1G32375 24.764 424 273 14 11 417 2 396 1.76e-15 78.6
MS.gene09992.t1 AT2G42730 27.717 368 216 15 10 348 4 350 2.82e-15 78.2
MS.gene09992.t1 AT1G69630 25.508 443 281 14 9 426 16 434 3.91e-15 77.8
MS.gene09992.t1 AT5G27750 24.714 437 270 14 11 408 5 421 3.96e-15 77.8
MS.gene09992.t1 AT3G59240 25.115 434 273 17 10 408 7 423 4.01e-15 77.8
MS.gene09992.t1 AT5G50270 25.355 422 280 14 11 419 2 401 4.46e-15 77.0
MS.gene09992.t1 AT3G49030 26.988 415 242 16 9 413 19 382 4.97e-15 77.0
MS.gene09992.t1 AT5G22660 26.540 422 271 15 10 411 12 414 6.06e-15 77.0
MS.gene09992.t1 AT3G52680 27.945 365 203 10 10 353 20 345 1.54e-14 75.1
MS.gene09992.t1 AT4G15060 28.065 310 178 15 8 294 169 456 1.61e-14 75.9
MS.gene09992.t1 AT4G15060 28.065 310 178 15 8 294 23 310 1.75e-14 75.5
MS.gene09992.t1 AT1G06630 27.824 363 224 14 10 353 11 354 2.78e-14 74.7
MS.gene09992.t1 AT1G06630 27.824 363 224 14 10 353 11 354 2.78e-14 74.7
MS.gene09992.t1 AT1G06630 27.824 363 224 14 10 353 11 354 2.78e-14 74.7
MS.gene09992.t1 AT1G06630 27.824 363 224 14 10 353 11 354 2.78e-14 74.7
MS.gene09992.t1 AT1G06630 27.978 361 222 14 10 351 11 352 3.17e-14 74.3
MS.gene09992.t1 AT1G06630 27.978 361 222 14 10 351 11 352 3.17e-14 74.3
MS.gene09992.t1 AT1G16930 25.172 437 272 15 5 416 9 415 3.58e-14 74.7
MS.gene09992.t1 AT1G16930 25.172 437 272 15 5 416 9 415 3.58e-14 74.7
MS.gene09992.t1 AT1G16930 25.172 437 272 15 5 416 9 415 3.58e-14 74.7
MS.gene09992.t1 AT2G26030 25.701 428 267 16 11 408 4 410 3.72e-14 74.7
MS.gene09992.t1 AT1G06630 27.824 363 224 14 10 353 20 363 4.17e-14 74.3
MS.gene09992.t1 AT1G06630 27.824 363 224 14 10 353 11 354 4.46e-14 74.3
MS.gene09992.t1 AT5G22700 32.843 204 117 6 1 196 28 219 4.93e-14 74.3
MS.gene09992.t1 AT1G66300 25.926 459 277 18 5 432 23 449 5.38e-14 73.9
MS.gene09992.t1 AT3G03030 37.063 143 79 3 11 143 2 143 5.57e-14 73.2
MS.gene09992.t1 AT3G56780 23.991 446 279 12 13 412 9 440 9.39e-14 73.6
MS.gene09992.t1 AT3G58900 27.356 329 186 11 11 302 2 314 9.68e-14 72.4
MS.gene09992.t1 AT3G58900 27.628 333 186 12 11 304 2 318 1.09e-13 72.4
MS.gene09992.t1 AT3G58900 27.628 333 186 12 11 304 2 318 1.09e-13 72.4
MS.gene09992.t1 AT1G13780 28.615 325 177 14 11 299 10 315 1.31e-13 72.0
MS.gene09992.t1 AT5G38392 33.495 206 112 6 11 200 2 198 1.33e-13 70.1
MS.gene09992.t1 AT1G66290 27.610 431 248 21 6 408 24 418 1.83e-13 72.4
MS.gene09992.t1 AT3G58930 23.110 463 278 15 11 419 2 440 2.53e-13 72.0
MS.gene09992.t1 AT3G58930 23.110 463 278 15 11 419 2 440 2.53e-13 72.0
MS.gene09992.t1 AT3G58930 23.110 463 278 15 11 419 2 440 2.53e-13 72.0
MS.gene09992.t1 AT3G54910 26.686 341 217 9 77 411 29 342 3.11e-13 71.2
MS.gene09992.t1 AT3G54910 26.686 341 217 9 77 411 29 342 3.11e-13 71.2
MS.gene09992.t1 AT3G54910 26.686 341 217 9 77 411 29 342 3.11e-13 71.2
MS.gene09992.t1 AT3G26922 28.216 241 156 7 10 245 13 241 3.69e-13 70.5
MS.gene09992.t1 AT3G26922 28.216 241 156 7 10 245 13 241 3.69e-13 70.5
MS.gene09992.t1 AT3G42770 26.303 422 256 16 16 413 4 394 5.32e-13 71.2
MS.gene09992.t1 AT5G56690 26.379 417 268 14 13 411 4 399 6.17e-13 70.5
MS.gene09992.t1 AT1G55030 24.877 406 271 14 11 409 9 387 7.05e-13 70.5
MS.gene09992.t1 AT3G59150 25.734 443 273 17 11 412 13 440 7.17e-13 70.9
MS.gene09992.t1 AT1G55030 24.877 406 271 14 11 409 19 397 8.50e-13 70.5
MS.gene09992.t1 AT3G62440 26.385 379 222 14 11 351 2 361 9.10e-13 70.5
MS.gene09992.t1 AT5G38590 28.526 312 178 13 10 305 1 283 1.49e-12 68.6
MS.gene09992.t1 AT5G56560 26.047 430 263 17 8 418 2 395 1.63e-12 69.3
MS.gene09992.t1 AT3G44810 25.208 361 232 11 16 354 12 356 1.78e-12 69.3
MS.gene09992.t1 AT1G52650 25.000 456 281 18 11 429 2 433 1.80e-12 69.3
MS.gene09992.t1 AT5G22730 26.230 366 228 11 10 350 27 375 1.84e-12 68.9
MS.gene09992.t1 AT5G56810 29.150 247 152 8 11 247 15 248 1.95e-12 68.2
MS.gene09992.t1 AT5G27750 24.934 381 232 11 11 354 5 368 5.73e-12 67.4
MS.gene09992.t1 AT4G10410 26.506 332 157 11 25 349 1 252 1.08e-11 65.5
MS.gene09992.t1 AT3G49020 25.917 436 276 16 9 430 20 422 1.09e-11 67.0
MS.gene09992.t1 AT3G58940 24.595 370 227 11 11 356 2 343 1.19e-11 67.4
MS.gene09992.t1 AT3G58940 24.595 370 227 11 11 356 2 343 1.19e-11 67.4
MS.gene09992.t1 AT3G49040 26.299 308 185 12 3 294 9 290 1.40e-11 65.9
MS.gene09992.t1 AT3G60040 25.238 420 257 14 4 393 223 615 1.63e-11 67.0
MS.gene09992.t1 AT3G60040 25.238 420 257 14 4 393 225 617 1.64e-11 67.0
MS.gene09992.t1 AT3G60040 25.238 420 257 14 4 393 6 398 2.05e-11 66.6
MS.gene09992.t1 AT3G60040 25.238 420 257 14 4 393 225 617 2.10e-11 66.6
MS.gene09992.t1 AT3G60040 25.238 420 257 14 4 393 226 618 2.22e-11 66.6
MS.gene09992.t1 AT5G38390 23.799 458 262 20 11 421 2 419 2.32e-11 65.9
MS.gene09992.t1 AT3G59000 23.583 441 283 15 11 413 2 426 3.18e-11 65.5
MS.gene09992.t1 AT5G56390 28.231 294 184 11 126 413 122 394 5.62e-11 64.7
MS.gene09992.t1 AT2G29910 25.886 367 216 15 10 339 4 351 6.52e-11 63.9
MS.gene09992.t1 AT2G29910 25.886 367 216 15 10 339 4 351 6.52e-11 63.9
MS.gene09992.t1 AT2G29910 25.886 367 216 15 10 339 4 351 6.52e-11 63.9
MS.gene09992.t1 AT2G29910 25.886 367 216 15 10 339 4 351 6.52e-11 63.9
MS.gene09992.t1 AT2G29910 25.886 367 216 15 10 339 28 375 8.07e-11 63.9
MS.gene09992.t1 AT3G49480 24.480 433 275 15 10 417 11 416 8.93e-11 63.9

Find 88 sgRNAs with CRISPR-Local

Find 107 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTACTGGTTTGTTTGAATT+TGG 0.121921 1.4:-72305849 None:intergenic
CTCATTACATTTGAATTTAG+AGG 0.218662 1.4:+72305741 MS.gene09992:CDS
ACAAATCCTCCATTCTAGTA+TGG 0.245317 1.4:+72305895 MS.gene09992:CDS
TTGAGCAATTTATAATATAT+CGG 0.265299 1.4:-72305797 None:intergenic
TAATCGGTCCTGCTCTTTAT+CGG 0.276903 1.4:-72304186 None:intergenic
TCACAATTTATCATCTTTAT+CGG 0.278854 1.4:+72305194 MS.gene09992:CDS
CAAGTGACGGGGCATTAATT+TGG 0.287533 1.4:-72304868 None:intergenic
ATGGCAAGATGCTTAAGTTT+TGG 0.290006 1.4:-72305273 None:intergenic
TATTGTGTTTAATTCTATCT+TGG 0.324989 1.4:+72304673 MS.gene09992:CDS
TGAAAGACATGTTGGAGTTT+CGG 0.342768 1.4:-72305712 None:intergenic
AAAGTCAAGGTTGGGGATCT+TGG 0.348543 1.4:-72304312 None:intergenic
GGAAAGCCTAAGGGGCAATA+AGG 0.368330 1.4:-72304543 None:intergenic
GGTAATTCAAAGTCAAGGTT+GGG 0.380669 1.4:-72304320 None:intergenic
ATATACAGATTGGATTGCTT+TGG 0.388000 1.4:-72304366 None:intergenic
TTTACATGACTGCATGAAAC+AGG 0.390447 1.4:+72304760 MS.gene09992:CDS
CGTCTGAAAGATCGCTTAAT+CGG 0.392098 1.4:-72304202 None:intergenic
AAATATCTGAAAATTGTTGT+TGG 0.393636 1.4:+72305220 MS.gene09992:CDS
GACCACAAGCGACTCAGAAA+TGG 0.407223 1.4:-72304564 None:intergenic
TCGAGTAAGCTTCTTTCTAC+TGG 0.410299 1.4:-72305864 None:intergenic
ATTTCTTTATTTCCGCGTCT+TGG 0.418727 1.4:+72304824 MS.gene09992:CDS
AAGAACTTGAATTCGATTGT+TGG 0.421294 1.4:+72304504 MS.gene09992:CDS
ACCATATGATATGCACTTGT+GGG 0.445487 1.4:+72304454 MS.gene09992:CDS
TAGAATTAAACACAATAAGT+TGG 0.445919 1.4:-72304667 None:intergenic
AAGAGTAGCTCGATCAAGAT+TGG 0.446848 1.4:-72304951 None:intergenic
TCTTTATTTCCGCGTCTTGG+TGG 0.450745 1.4:+72304827 MS.gene09992:CDS
ATTTGTTAGTATGATGTTGC+GGG 0.453682 1.4:+72306005 MS.gene09992:intron
TGAGCAATTTATAATATATC+GGG 0.461008 1.4:-72305796 None:intergenic
TTTATGCAGTTTCTAAGCAT+GGG 0.464461 1.4:+72305138 MS.gene09992:intron
ACTTAAGCATCTTGCCATTG+AGG 0.470976 1.4:+72305278 MS.gene09992:CDS
TTGCTCAAGTAATTTGAAGA+AGG 0.471257 1.4:+72305812 MS.gene09992:CDS
TGAATTCGATTGTTGGTCCA+TGG 0.474053 1.4:+72304511 MS.gene09992:CDS
TCTTCGCATTAGTAATCATC+CGG 0.478281 1.4:+72304970 MS.gene09992:CDS
ACTCAGAAATGGAAAGCCTA+AGG 0.480945 1.4:-72304553 None:intergenic
CTTTGAATTACCAATGACTA+CGG 0.481951 1.4:+72304331 MS.gene09992:CDS
GCAGAGCTGCATATACAGAT+TGG 0.482455 1.4:-72304376 None:intergenic
ACCCACAAGTGCATATCATA+TGG 0.486209 1.4:-72304455 None:intergenic
GTATACAAACTGTTCAAATC+CGG 0.486513 1.4:-72304989 None:intergenic
TTCCATTTCTGAGTCGCTTG+TGG 0.504540 1.4:+72304562 MS.gene09992:CDS
TCAGAAGAATAATTAAGTCT+TGG 0.507877 1.4:-72304611 None:intergenic
AGCCTAAGGGGCAATAAGGT+TGG 0.508182 1.4:-72304539 None:intergenic
TGGTAATTCAAAGTCAAGGT+TGG 0.508833 1.4:-72304321 None:intergenic
GAATAATTAAGTCTTGGATA+AGG 0.509422 1.4:-72304605 None:intergenic
TTTGCAGAACGTCAAGTGAC+GGG 0.513099 1.4:-72304880 None:intergenic
GACATAGGATCCGTAGTCAT+TGG 0.517402 1.4:-72304341 None:intergenic
CAAATCCTCCATTCTAGTAT+GGG 0.523811 1.4:+72305896 MS.gene09992:CDS
TCAAAACGTACAAACTGAGT+TGG 0.523905 1.4:+72305767 MS.gene09992:CDS
ATCTCGTTGTCCACATCTTG+AGG 0.524833 1.4:+72304730 MS.gene09992:CDS
AGAGGTTGAAAACACAGGTT+GGG 0.525676 1.4:+72305680 MS.gene09992:CDS
AATTTGGAGTGGACAAACAT+TGG 0.530609 1.4:-72304852 None:intergenic
GTTGAAAACACAGGTTGGGT+GGG 0.532925 1.4:+72305684 MS.gene09992:CDS
AATATTCATACACACCTCAA+TGG 0.534611 1.4:-72305292 None:intergenic
GGTTGAAAACACAGGTTGGG+TGG 0.534898 1.4:+72305683 MS.gene09992:CDS
CCAGTGTTCTATCTACAAGA+TGG 0.537999 1.4:+72304276 MS.gene09992:CDS
CAATAAGGTTGGTTTCTCCA+TGG 0.541074 1.4:-72304528 None:intergenic
AACCAACCTTATTGCCCCTT+AGG 0.541824 1.4:+72304537 MS.gene09992:CDS
TGGATTGCTTTGGACGACAT+AGG 0.543112 1.4:-72304356 None:intergenic
ACTTCATACCCATACTAGAA+TGG 0.545060 1.4:-72305904 None:intergenic
TATTTGTTAGTATGATGTTG+CGG 0.547127 1.4:+72306004 MS.gene09992:intron
CTCAGAAATGGAAAGCCTAA+GGG 0.547492 1.4:-72304552 None:intergenic
TTGAAAACACAGGTTGGGTG+GGG 0.553467 1.4:+72305685 MS.gene09992:CDS
CAGTGTTCTATCTACAAGAT+GGG 0.555298 1.4:+72304277 MS.gene09992:CDS
ATTCAAGTTCTTGAACCTTG+AGG 0.556422 1.4:-72304493 None:intergenic
CACCATATGATATGCACTTG+TGG 0.561872 1.4:+72304453 MS.gene09992:CDS
TTATGCAGTTTCTAAGCATG+GGG 0.573192 1.4:+72305139 MS.gene09992:intron
TTCAAAAGCACTAGACCTCA+AGG 0.574224 1.4:+72304478 MS.gene09992:CDS
AAGAGGTTGAAAACACAGGT+TGG 0.577723 1.4:+72305679 MS.gene09992:CDS
GTAATTCAAAGTCAAGGTTG+GGG 0.578498 1.4:-72304319 None:intergenic
CTTCGAATCCGATAAAGAGC+AGG 0.581369 1.4:+72304178 MS.gene09992:CDS
GACGGGGCATTAATTTGGAG+TGG 0.584321 1.4:-72304863 None:intergenic
ATTTGCAGAACGTCAAGTGA+CGG 0.592314 1.4:-72304881 None:intergenic
AGACATGTTGGAGTTTCGGA+TGG 0.596785 1.4:-72305708 None:intergenic
AGATGAAGAATCTTTAGTGA+CGG 0.601943 1.4:-72304644 None:intergenic
CTTGTGGTCTTAAAATTGCG+AGG 0.603071 1.4:+72304578 MS.gene09992:CDS
CTAAGTCTCTATAGTGACGA+TGG 0.611578 1.4:+72304425 MS.gene09992:CDS
TGTGAAAAGTGAGAAGATGT+AGG 0.614072 1.4:-72305176 None:intergenic
GTAGAAAGAAGCTTACTCGA+GGG 0.619367 1.4:+72305867 MS.gene09992:CDS
TCATTGGTAATTCAAAGTCA+AGG 0.634424 1.4:-72304325 None:intergenic
ACCGAAGAGGTTGAAAACAC+AGG 0.639338 1.4:+72305675 MS.gene09992:CDS
GTTAGTATGATGTTGCGGGA+TGG 0.653129 1.4:+72306009 MS.gene09992:intron
TTGCAGAACGTCAAGTGACG+GGG 0.657565 1.4:-72304879 None:intergenic
TCAGAAATGGAAAGCCTAAG+GGG 0.659069 1.4:-72304551 None:intergenic
TAGAAAGAAGCTTACTCGAG+GGG 0.661193 1.4:+72305868 MS.gene09992:CDS
AGTAGAAAGAAGCTTACTCG+AGG 0.666155 1.4:+72305866 MS.gene09992:CDS
TCATACCCATACTAGAATGG+AGG 0.667044 1.4:-72305901 None:intergenic
CCATCTTGTAGATAGAACAC+TGG 0.676162 1.4:-72304276 None:intergenic
ACATTGGAACCACCAAGACG+CGG 0.705115 1.4:-72304836 None:intergenic
TATGCAGTTTCTAAGCATGG+GGG 0.711635 1.4:+72305140 MS.gene09992:intron
GTGGTCTTAAAATTGCGAGG+CGG 0.719320 1.4:+72304581 MS.gene09992:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATTAATTATTTTTTTAT+CGG - chr1.4:72305440-72305459 None:intergenic 0.0%
!! TAATGAAAAGTTATAACAAA+TGG + chr1.4:72305476-72305495 MS.gene09992:intron 15.0%
!! TTAAACGATACTAAATATTA+TGG - chr1.4:72305629-72305648 None:intergenic 15.0%
!! TTGAGCAATTTATAATATAT+CGG - chr1.4:72305800-72305819 None:intergenic 15.0%
!!! TGCACAATATTTTTTAAAAA+TGG + chr1.4:72305327-72305346 MS.gene09992:intron 15.0%
!! AAATATCTGAAAATTGTTGT+TGG + chr1.4:72305220-72305239 MS.gene09992:CDS 20.0%
!! ATGCATTTAATATTCATGTT+AGG + chr1.4:72305530-72305549 MS.gene09992:intron 20.0%
!! TAGAATTAAACACAATAAGT+TGG - chr1.4:72304670-72304689 None:intergenic 20.0%
!! TATTGTGTTTAATTCTATCT+TGG + chr1.4:72304673-72304692 MS.gene09992:CDS 20.0%
!! TCACAATTTATCATCTTTAT+CGG + chr1.4:72305194-72305213 MS.gene09992:CDS 20.0%
!! TGAGCAATTTATAATATATC+GGG - chr1.4:72305799-72305818 None:intergenic 20.0%
!!! ACTTAGTTTTCTTAAGTTTT+CGG - chr1.4:72304411-72304430 None:intergenic 20.0%
!!! TTTATGAACTCATATTTTCT+GGG - chr1.4:72304926-72304945 None:intergenic 20.0%
! AAAAAAAATTCCTCAAGATG+TGG - chr1.4:72304743-72304762 None:intergenic 25.0%
! CTCATTACATTTGAATTTAG+AGG + chr1.4:72305741-72305760 MS.gene09992:CDS 25.0%
! GAATAATTAAGTCTTGGATA+AGG - chr1.4:72304608-72304627 None:intergenic 25.0%
! TCAGAAGAATAATTAAGTCT+TGG - chr1.4:72304614-72304633 None:intergenic 25.0%
! TGCATATGAGTAACAAAATA+TGG - chr1.4:72305109-72305128 None:intergenic 25.0%
!! GTTTATGAACTCATATTTTC+TGG - chr1.4:72304927-72304946 None:intergenic 25.0%
!! TATTTGTTAGTATGATGTTG+CGG + chr1.4:72306004-72306023 MS.gene09992:intron 25.0%
!! TTTTTATGAACGAGAAATGT+TGG + chr1.4:72305966-72305985 MS.gene09992:intron 25.0%
!!! AGATTTTTTGAAAGACATGT+TGG - chr1.4:72305723-72305742 None:intergenic 25.0%
AAGAACTTGAATTCGATTGT+TGG + chr1.4:72304504-72304523 MS.gene09992:CDS 30.0%
AATATTCATACACACCTCAA+TGG - chr1.4:72305295-72305314 None:intergenic 30.0%
AGATGAAGAATCTTTAGTGA+CGG - chr1.4:72304647-72304666 None:intergenic 30.0%
ATATACAGATTGGATTGCTT+TGG - chr1.4:72304369-72304388 None:intergenic 30.0%
CTTTGAATTACCAATGACTA+CGG + chr1.4:72304331-72304350 MS.gene09992:CDS 30.0%
GTATACAAACTGTTCAAATC+CGG - chr1.4:72304992-72305011 None:intergenic 30.0%
TCGTGTAATATTGTCTACAT+GGG - chr1.4:72305566-72305585 None:intergenic 30.0%
TTGCTCAAGTAATTTGAAGA+AGG + chr1.4:72305812-72305831 MS.gene09992:CDS 30.0%
TTTATGCAGTTTCTAAGCAT+GGG + chr1.4:72305138-72305157 MS.gene09992:intron 30.0%
! ATTTGTTAGTATGATGTTGC+GGG + chr1.4:72306005-72306024 MS.gene09992:intron 30.0%
! TCATTGGTAATTCAAAGTCA+AGG - chr1.4:72304328-72304347 None:intergenic 30.0%
! TTTTATGCAGTTTCTAAGCA+TGG + chr1.4:72305137-72305156 MS.gene09992:intron 30.0%
!! TCTACTGGTTTGTTTGAATT+TGG - chr1.4:72305852-72305871 None:intergenic 30.0%
!!! GAAAATTTTTGAAACCGAAG+AGG + chr1.4:72305662-72305681 MS.gene09992:intron 30.0%
!!! TGTAAGACTCTTTTGTTGTT+AGG - chr1.4:72304253-72304272 None:intergenic 30.0%
AAGATTGAGCGAAAGATACT+TGG + chr1.4:72305399-72305418 MS.gene09992:intron 35.0%
ACAAATCCTCCATTCTAGTA+TGG + chr1.4:72305895-72305914 MS.gene09992:CDS 35.0%
ACCATATGATATGCACTTGT+GGG + chr1.4:72304454-72304473 MS.gene09992:CDS 35.0%
ACTTCATACCCATACTAGAA+TGG - chr1.4:72305907-72305926 None:intergenic 35.0%
CAAATCCTCCATTCTAGTAT+GGG + chr1.4:72305896-72305915 MS.gene09992:CDS 35.0%
CAGTGTTCTATCTACAAGAT+GGG + chr1.4:72304277-72304296 MS.gene09992:CDS 35.0%
GGTAATTCAAAGTCAAGGTT+GGG - chr1.4:72304323-72304342 None:intergenic 35.0%
GTAATTCAAAGTCAAGGTTG+GGG - chr1.4:72304322-72304341 None:intergenic 35.0%
GTCGTGTAATATTGTCTACA+TGG - chr1.4:72305567-72305586 None:intergenic 35.0%
TCAAAACGTACAAACTGAGT+TGG + chr1.4:72305767-72305786 MS.gene09992:CDS 35.0%
TCTTCGCATTAGTAATCATC+CGG + chr1.4:72304970-72304989 MS.gene09992:CDS 35.0%
TGAAAGACATGTTGGAGTTT+CGG - chr1.4:72305715-72305734 None:intergenic 35.0%
TGGTAATTCAAAGTCAAGGT+TGG - chr1.4:72304324-72304343 None:intergenic 35.0%
TGTGAAAAGTGAGAAGATGT+AGG - chr1.4:72305179-72305198 None:intergenic 35.0%
TTATGCAGTTTCTAAGCATG+GGG + chr1.4:72305139-72305158 MS.gene09992:intron 35.0%
TTTACATGACTGCATGAAAC+AGG + chr1.4:72304760-72304779 MS.gene09992:CDS 35.0%
! AATTTGGAGTGGACAAACAT+TGG - chr1.4:72304855-72304874 None:intergenic 35.0%
! ATGGCAAGATGCTTAAGTTT+TGG - chr1.4:72305276-72305295 None:intergenic 35.0%
! ATTCAAGTTCTTGAACCTTG+AGG - chr1.4:72304496-72304515 None:intergenic 35.0%
! ATTTCTTTATTTCCGCGTCT+TGG + chr1.4:72304824-72304843 MS.gene09992:CDS 35.0%
AAGAGGTTGAAAACACAGGT+TGG + chr1.4:72305679-72305698 MS.gene09992:CDS 40.0%
AAGAGTAGCTCGATCAAGAT+TGG - chr1.4:72304954-72304973 None:intergenic 40.0%
ACCCACAAGTGCATATCATA+TGG - chr1.4:72304458-72304477 None:intergenic 40.0%
ACTCAGAAATGGAAAGCCTA+AGG - chr1.4:72304556-72304575 None:intergenic 40.0%
ACTTAAGCATCTTGCCATTG+AGG + chr1.4:72305278-72305297 MS.gene09992:CDS 40.0%
AGAGGTTGAAAACACAGGTT+GGG + chr1.4:72305680-72305699 MS.gene09992:CDS 40.0%
AGTAGAAAGAAGCTTACTCG+AGG + chr1.4:72305866-72305885 MS.gene09992:CDS 40.0%
ATTTGCAGAACGTCAAGTGA+CGG - chr1.4:72304884-72304903 None:intergenic 40.0%
CACCATATGATATGCACTTG+TGG + chr1.4:72304453-72304472 MS.gene09992:CDS 40.0%
CCAGTGTTCTATCTACAAGA+TGG + chr1.4:72304276-72304295 MS.gene09992:CDS 40.0%
CCATCTTGTAGATAGAACAC+TGG - chr1.4:72304279-72304298 None:intergenic 40.0%
CGTCTGAAAGATCGCTTAAT+CGG - chr1.4:72304205-72304224 None:intergenic 40.0%
CTAAGTCTCTATAGTGACGA+TGG + chr1.4:72304425-72304444 MS.gene09992:CDS 40.0%
CTCAGAAATGGAAAGCCTAA+GGG - chr1.4:72304555-72304574 None:intergenic 40.0%
GTAGAAAGAAGCTTACTCGA+GGG + chr1.4:72305867-72305886 MS.gene09992:CDS 40.0%
TAATCGGTCCTGCTCTTTAT+CGG - chr1.4:72304189-72304208 None:intergenic 40.0%
TAGAAAGAAGCTTACTCGAG+GGG + chr1.4:72305868-72305887 MS.gene09992:CDS 40.0%
TATGCAGTTTCTAAGCATGG+GGG + chr1.4:72305140-72305159 MS.gene09992:intron 40.0%
TCAGAAATGGAAAGCCTAAG+GGG - chr1.4:72304554-72304573 None:intergenic 40.0%
TCATACCCATACTAGAATGG+AGG - chr1.4:72305904-72305923 None:intergenic 40.0%
TCGAGTAAGCTTCTTTCTAC+TGG - chr1.4:72305867-72305886 None:intergenic 40.0%
TGAATTCGATTGTTGGTCCA+TGG + chr1.4:72304511-72304530 MS.gene09992:CDS 40.0%
! ACCTGTGTTTTCAACCTCTT+CGG - chr1.4:72305679-72305698 None:intergenic 40.0%
! CTTGTGGTCTTAAAATTGCG+AGG + chr1.4:72304578-72304597 MS.gene09992:CDS 40.0%
!! CAATAAGGTTGGTTTCTCCA+TGG - chr1.4:72304531-72304550 None:intergenic 40.0%
!! TTCAAAAGCACTAGACCTCA+AGG + chr1.4:72304478-72304497 MS.gene09992:CDS 40.0%
AAAGTCAAGGTTGGGGATCT+TGG - chr1.4:72304315-72304334 None:intergenic 45.0%
AACCAACCTTATTGCCCCTT+AGG + chr1.4:72304537-72304556 MS.gene09992:CDS 45.0%
ACCGAAGAGGTTGAAAACAC+AGG + chr1.4:72305675-72305694 MS.gene09992:CDS 45.0%
AGACATGTTGGAGTTTCGGA+TGG - chr1.4:72305711-72305730 None:intergenic 45.0%
ATCTCGTTGTCCACATCTTG+AGG + chr1.4:72304730-72304749 MS.gene09992:CDS 45.0%
CTTCGAATCCGATAAAGAGC+AGG + chr1.4:72304178-72304197 MS.gene09992:CDS 45.0%
GACATAGGATCCGTAGTCAT+TGG - chr1.4:72304344-72304363 None:intergenic 45.0%
GCAGAGCTGCATATACAGAT+TGG - chr1.4:72304379-72304398 None:intergenic 45.0%
GTTAGTATGATGTTGCGGGA+TGG + chr1.4:72306009-72306028 MS.gene09992:intron 45.0%
TTCCATTTCTGAGTCGCTTG+TGG + chr1.4:72304562-72304581 MS.gene09992:CDS 45.0%
TTTGCAGAACGTCAAGTGAC+GGG - chr1.4:72304883-72304902 None:intergenic 45.0%
! CAAGTGACGGGGCATTAATT+TGG - chr1.4:72304871-72304890 None:intergenic 45.0%
! GTGGTCTTAAAATTGCGAGG+CGG + chr1.4:72304581-72304600 MS.gene09992:CDS 45.0%
! GTTGAAAACACAGGTTGGGT+GGG + chr1.4:72305684-72305703 MS.gene09992:CDS 45.0%
! TCTTTATTTCCGCGTCTTGG+TGG + chr1.4:72304827-72304846 MS.gene09992:CDS 45.0%
! TGGATTGCTTTGGACGACAT+AGG - chr1.4:72304359-72304378 None:intergenic 45.0%
! TTGAAAACACAGGTTGGGTG+GGG + chr1.4:72305685-72305704 MS.gene09992:CDS 45.0%
ACATTGGAACCACCAAGACG+CGG - chr1.4:72304839-72304858 None:intergenic 50.0%
AGCCTAAGGGGCAATAAGGT+TGG - chr1.4:72304542-72304561 None:intergenic 50.0%
GACCACAAGCGACTCAGAAA+TGG - chr1.4:72304567-72304586 None:intergenic 50.0%
GGAAAGCCTAAGGGGCAATA+AGG - chr1.4:72304546-72304565 None:intergenic 50.0%
TTGCAGAACGTCAAGTGACG+GGG - chr1.4:72304882-72304901 None:intergenic 50.0%
! GACGGGGCATTAATTTGGAG+TGG - chr1.4:72304866-72304885 None:intergenic 50.0%
! GGTTGAAAACACAGGTTGGG+TGG + chr1.4:72305683-72305702 MS.gene09992:CDS 50.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 72304170 72306034 72304170 ID=MS.gene09992
chr1.4 mRNA 72304170 72306034 72304170 ID=MS.gene09992.t1;Parent=MS.gene09992
chr1.4 exon 72304170 72305069 72304170 ID=MS.gene09992.t1.exon1;Parent=MS.gene09992.t1
chr1.4 CDS 72304170 72305069 72304170 ID=cds.MS.gene09992.t1;Parent=MS.gene09992.t1
chr1.4 exon 72305147 72305299 72305147 ID=MS.gene09992.t1.exon2;Parent=MS.gene09992.t1
chr1.4 CDS 72305147 72305299 72305147 ID=cds.MS.gene09992.t1;Parent=MS.gene09992.t1
chr1.4 exon 72305663 72305917 72305663 ID=MS.gene09992.t1.exon3;Parent=MS.gene09992.t1
chr1.4 CDS 72305663 72305917 72305663 ID=cds.MS.gene09992.t1;Parent=MS.gene09992.t1
chr1.4 exon 72306014 72306034 72306014 ID=MS.gene09992.t1.exon4;Parent=MS.gene09992.t1
chr1.4 CDS 72306014 72306034 72306014 ID=cds.MS.gene09992.t1;Parent=MS.gene09992.t1
Gene Sequence

>MS.gene09992

ATGGCGTGCTTCGAATCCGATAAAGAGCAGGACCGATTAAGCGATCTTTCAGACGAATTGATTATTCATATTTTGTCTTTCCTAACAACAAAAGAGTCTTACAGAACCAGTGTTCTATCTACAAGATGGGAGTCGATTTGCACCAAGATCCCCAACCTTGACTTTGAATTACCAATGACTACGGATCCTATGTCGTCCAAAGCAATCCAATCTGTATATGCAGCTCTGCTTAGACGCACCGAAAACTTAAGAAAACTAAGTCTCTATAGTGACGATGGCTGCACACCATATGATATGCACTTGTGGGTTTCAAAAGCACTAGACCTCAAGGTTCAAGAACTTGAATTCGATTGTTGGTCCATGGAGAAACCAACCTTATTGCCCCTTAGGCTTTCCATTTCTGAGTCGCTTGTGGTCTTAAAATTGCGAGGCGGACCTTATCCAAGACTTAATTATTCTTCTGATGTGTGTTTTCCGTCACTAAAGATTCTTCATCTCCAACTTATTGTGTTTAATTCTATCTTGGATAATCATAGTGAGTATGATCTTGCTAATTTTCTATCTCGTTGTCCACATCTTGAGGAATTTTTTTTACATGACTGCATGAAACAGGCGATCAATATTGTCTCTTTTCACTCGTTAAAGAGAGTATTCATTTCTTTATTTCCGCGTCTTGGTGGTTCCAATGTTTGTCCACTCCAAATTAATGCCCCGTCACTTGACGTTCTGCAAATTGTTGATACTTCAATTTCTCCCAGAAAATATGAGTTCATAAACTTGTCCAATCTTGATCGAGCTACTCTTCGCATTAGTAATCATCCGGATTTGAACAGTTTGTATACACTCTTGAAAGAAATTTCTAATGTTAAATCACTGACTATCAGTTCTGAAACTATTCATGTAAGTTTCATAATCTTTTTTTTTTAATGATAAGTTCCATATTTTGTTACTCATATGCAATGTTTTTTTTTATGCAGTTTCTAAGCATGGGGGATAATCTTGACAACCTACATCTTCTCACTTTTCACAATTTATCATCTTTATCGGTTGAAATATCTGAAAATTGTTGTTGGAATGTGCTCGTTAGCATACTACAGTATGCTCCAAAACTTAAGCATCTTGCCATTGAGGTGTGTATGAATATTTTTAACTACATTTGCACAATATTTTTTAAAAATGGTAAAATATATTAATAAGCTCAAAATATATCACAACTCACAAGACGTGCAAAGATTGAGCGAAAGATACTTGGAATTTGCAAATAAAACCGATAAAAAAATAATTAATATAGCATGCATGCTAGTTTTAATGAAAAGTTATAACAAATGGTTCACAGTTATTATCAGTTAGTTGTAATAAGATGCATTTAATATTCATGTTAGGTTTTTATTTGCCCATGTAGACAATATTACACGACGCAATTATGTGTTGTATATTCATTGAGAAGTTCTAATAACCATAATATTTAGTATCGTTTAATCGTTTACATGCAGAAAATTTTTGAAACCGAAGAGGTTGAAAACACAGGTTGGGTGGGGCCATCCGAAACTCCAACATGTCTTTCAAAAAATCTCATTACATTTGAATTTAGAGGAATTCAAAACGTACAAACTGAGTTGGACTTTACCCGATATATTATAAATTGCTCAAGTAATTTGAAGAAGGCAAAGATTTTCACTCCAAATTCAAACAAACCAGTAGAAAGAAGCTTACTCGAGGGGTCAAACAAATCCTCCATTCTAGTATGGGTATGAAGTTTACACACTTTCTTTTCTTTAATACTTGAATTTATATACTTTTTATGAACGAGAAATGTTGGTATATATGTTAATAGTATTTGTTAGTATGATGTTGCGGGATGGTAA

Protein sequence

>MS.gene09992.t1

MACFESDKEQDRLSDLSDELIIHILSFLTTKESYRTSVLSTRWESICTKIPNLDFELPMTTDPMSSKAIQSVYAALLRRTENLRKLSLYSDDGCTPYDMHLWVSKALDLKVQELEFDCWSMEKPTLLPLRLSISESLVVLKLRGGPYPRLNYSSDVCFPSLKILHLQLIVFNSILDNHSEYDLANFLSRCPHLEEFFLHDCMKQAINIVSFHSLKRVFISLFPRLGGSNVCPLQINAPSLDVLQIVDTSISPRKYEFINLSNLDRATLRISNHPDLNSLYTLLKEISNVKSLTISSETIHFLSMGDNLDNLHLLTFHNLSSLSVEISENCCWNVLVSILQYAPKLKHLAIEKIFETEEVENTGWVGPSETPTCLSKNLITFEFRGIQNVQTELDFTRYIINCSSNLKKAKIFTPNSNKPVERSLLEGSNKSSILVWYDVAGW