AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene89961


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89961.t1 MTR_4g056020 87.582 459 48 1 1 450 1 459 0.0 808
MS.gene89961.t1 MTR_4g055990 78.643 501 56 4 1 450 1 501 0.0 746
MS.gene89961.t1 MTR_4g056030 82.327 447 70 1 1 438 1 447 0.0 731
MS.gene89961.t1 MTR_4g055990 77.282 493 58 6 1 442 1 490 0.0 712
MS.gene89961.t1 MTR_4g055580 76.423 492 69 4 1 446 92 582 0.0 708
MS.gene89961.t1 MTR_4g056040 75.161 467 77 2 1 428 1 467 0.0 686
MS.gene89961.t1 MTR_4g056070 73.684 437 66 2 1 388 1 437 0.0 623
MS.gene89961.t1 MTR_1g038710 66.295 448 134 4 1 433 11 456 0.0 553
MS.gene89961.t1 MTR_1g090883 61.190 353 124 4 2 343 12 362 1.79e-136 397
MS.gene89961.t1 MTR_7g110920 52.514 358 104 6 99 428 1 320 2.35e-110 328
MS.gene89961.t1 MTR_4g056020 88.957 163 18 0 288 450 1 163 2.92e-100 296
MS.gene89961.t1 MTR_4g093690 53.309 272 109 7 1 259 10 276 3.50e-76 239
MS.gene89961.t1 MTR_1g090900 66.667 177 56 2 1 174 1 177 2.53e-68 216
MS.gene89961.t1 MTR_4g056010 89.899 99 10 0 69 167 2 100 3.53e-56 181
MS.gene89961.t1 MTR_5g084070 30.383 418 249 15 5 407 9 399 8.70e-31 123
MS.gene89961.t1 MTR_1g090890 60.440 91 30 2 341 428 29 116 4.38e-28 107
MS.gene89961.t1 MTR_5g080710 30.788 419 236 17 9 403 33 421 6.22e-25 107
MS.gene89961.t1 MTR_8g062270 30.000 420 257 16 9 402 16 424 9.75e-25 106
MS.gene89961.t1 MTR_4g032730 28.989 445 226 22 9 394 15 428 3.72e-24 105
MS.gene89961.t1 MTR_8g467800 30.843 415 241 14 5 391 16 412 1.47e-23 103
MS.gene89961.t1 MTR_1g041245 27.696 408 223 15 9 405 11 357 3.87e-23 100
MS.gene89961.t1 MTR_7g056433 26.376 436 246 20 4 424 7 382 6.29e-22 97.4
MS.gene89961.t1 MTR_8g468810 27.540 443 275 16 4 417 20 445 1.45e-21 97.1
MS.gene89961.t1 MTR_8g445780 28.856 402 238 12 9 387 13 389 2.62e-21 95.9
MS.gene89961.t1 MTR_1g053025 25.517 435 251 15 9 424 2 382 1.06e-20 94.0
MS.gene89961.t1 MTR_8g058970 27.872 470 273 16 4 425 14 465 1.90e-20 94.0
MS.gene89961.t1 MTR_7g007340 27.477 444 229 16 4 439 8 366 2.03e-20 92.8
MS.gene89961.t1 MTR_2g083840 29.298 413 246 17 9 394 21 414 2.12e-20 93.6
MS.gene89961.t1 MTR_8g014260 28.046 435 256 17 6 407 13 423 6.50e-20 92.0
MS.gene89961.t1 MTR_2g007400 25.541 462 235 21 9 431 12 403 1.45e-19 90.9
MS.gene89961.t1 MTR_7g098570 26.316 399 231 12 9 402 20 360 2.80e-19 90.5
MS.gene89961.t1 MTR_2g007450 24.424 434 251 16 1 404 8 394 5.16e-19 89.4
MS.gene89961.t1 MTR_5g008950 25.917 409 217 14 11 405 1 337 6.40e-19 88.6
MS.gene89961.t1 MTR_7g007080 26.562 448 235 18 7 429 2 380 6.41e-19 88.6
MS.gene89961.t1 MTR_7g098510 25.829 422 240 14 7 418 16 374 1.14e-18 87.8
MS.gene89961.t1 MTR_6g045333 25.926 405 237 13 9 402 61 413 1.25e-18 88.2
MS.gene89961.t1 MTR_2g005990 24.670 454 233 20 9 424 6 388 1.44e-18 87.8
MS.gene89961.t1 MTR_3g108560 28.899 436 219 19 6 425 17 377 1.88e-18 87.4
MS.gene89961.t1 MTR_3g107100 26.471 408 232 14 5 402 7 356 1.89e-18 87.4
MS.gene89961.t1 MTR_8g468840 26.777 422 268 15 8 402 13 420 9.91e-18 85.5
MS.gene89961.t1 MTR_3g082890 27.053 414 232 16 6 402 94 454 2.65e-17 84.3
MS.gene89961.t1 MTR_8g468810 28.904 301 180 11 4 281 20 309 1.02e-15 78.6
MS.gene89961.t1 MTR_8g467800 31.908 304 172 9 5 285 16 307 1.10e-15 78.6
MS.gene89961.t1 MTR_3g108150 25.408 429 246 14 9 424 13 380 1.26e-15 78.6
MS.gene89961.t1 MTR_8g468810 28.904 301 180 11 4 281 20 309 1.27e-15 78.2
MS.gene89961.t1 MTR_8g468810 28.255 361 219 14 4 337 20 367 1.45e-15 78.6
MS.gene89961.t1 MTR_8g468810 28.904 301 180 11 4 281 20 309 1.76e-15 77.8
MS.gene89961.t1 MTR_7g026500 23.765 425 239 14 8 411 13 373 2.84e-15 77.8
MS.gene89961.t1 MTR_7g098480 26.238 404 227 13 7 402 16 356 4.08e-15 77.8
MS.gene89961.t1 MTR_2g008320 25.400 437 246 18 9 427 52 426 4.27e-15 77.4
MS.gene89961.t1 MTR_7g033945 34.884 172 88 7 9 165 11 173 8.12e-15 72.8
MS.gene89961.t1 MTR_2g008310 25.490 408 226 18 9 403 2 344 1.07e-14 75.9
MS.gene89961.t1 MTR_3g023630 23.632 402 235 13 9 402 8 345 2.04e-14 75.1
MS.gene89961.t1 MTR_2g007500 24.479 384 215 13 9 379 14 335 3.97e-14 73.6
MS.gene89961.t1 MTR_1g013560 25.768 423 259 13 5 402 15 407 8.68e-14 73.6
MS.gene89961.t1 MTR_3g107160 22.883 437 258 14 4 425 5 377 1.15e-13 72.8
MS.gene89961.t1 MTR_1g107385 25.169 445 244 17 9 424 32 416 2.36e-13 72.0
MS.gene89961.t1 MTR_3g109982 25.166 453 267 13 4 402 8 442 3.18e-13 72.4
MS.gene89961.t1 MTR_5g058100 25.814 430 238 16 9 424 9 371 6.06e-13 70.5
MS.gene89961.t1 MTR_0492s0020 34.320 169 96 7 9 173 86 243 7.94e-13 70.5
MS.gene89961.t1 MTR_4g039440 24.694 409 227 17 9 402 34 376 8.46e-13 70.1
MS.gene89961.t1 MTR_0543s0010 34.320 169 96 7 9 173 86 243 9.63e-13 70.1
MS.gene89961.t1 MTR_7g034115 36.250 160 92 4 9 163 11 165 1.05e-12 69.7
MS.gene89961.t1 MTR_1g085120 26.056 426 229 19 9 415 92 450 1.12e-12 70.1
MS.gene89961.t1 MTR_7g032380 31.148 183 109 6 9 185 11 182 1.14e-12 69.3
MS.gene89961.t1 MTR_3g082890 24.944 449 234 16 6 402 14 411 1.35e-12 69.7
MS.gene89961.t1 MTR_1g085120 26.056 426 229 19 9 415 167 525 1.36e-12 70.1
MS.gene89961.t1 MTR_2g091145 26.824 425 251 18 5 402 17 408 2.01e-12 69.3
MS.gene89961.t1 MTR_1g014450 24.605 443 237 18 4 402 11 400 2.40e-12 68.9
MS.gene89961.t1 MTR_6g011460 24.460 417 235 15 9 412 46 395 2.56e-12 68.9
MS.gene89961.t1 MTR_4g080773 27.273 451 269 20 6 414 13 446 2.99e-12 68.9
MS.gene89961.t1 MTR_4g080773 27.273 451 269 20 6 414 13 446 3.46e-12 68.6
MS.gene89961.t1 MTR_5g039950 27.805 410 235 16 9 402 23 387 3.68e-12 68.2
MS.gene89961.t1 MTR_1g108820 25.062 403 235 17 9 402 8 352 4.55e-12 67.8
MS.gene89961.t1 MTR_4g047950 28.417 278 168 11 5 253 9 284 5.99e-12 67.4
MS.gene89961.t1 MTR_7g033915 36.607 112 65 3 9 116 11 120 1.17e-11 66.2
MS.gene89961.t1 MTR_8g085430 30.601 183 102 6 9 175 11 184 1.24e-11 66.2
MS.gene89961.t1 MTR_2g082800 33.193 238 123 11 4 232 22 232 1.73e-11 66.2
MS.gene89961.t1 MTR_1g115245 30.400 250 131 7 4 243 21 237 3.21e-11 64.7
MS.gene89961.t1 MTR_8g058965 25.874 429 275 16 9 407 13 428 3.53e-11 65.5
MS.gene89961.t1 MTR_1g013560 33.333 183 107 5 5 174 15 195 3.82e-11 64.7
MS.gene89961.t1 MTR_7g110910 81.579 38 7 0 1 38 158 195 4.72e-11 62.4
MS.gene89961.t1 MTR_1g013840 24.700 417 262 13 9 402 56 443 4.73e-11 65.1
MS.gene89961.t1 MTR_8g062080 32.044 181 108 7 1 168 15 193 5.41e-11 64.7
MS.gene89961.t1 MTR_2g036470 24.344 419 223 15 9 402 14 363 6.21e-11 64.3
MS.gene89961.t1 MTR_6g022360 31.250 176 102 5 3 174 37 197 6.25e-11 64.3
MS.gene89961.t1 MTR_8g014160 34.463 177 99 5 4 163 36 212 9.49e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89961.t1 AT4G00315 29.224 438 259 19 9 413 2 421 3.37e-29 119
MS.gene89961.t1 AT1G55660 27.955 440 262 18 9 413 53 472 1.34e-28 118
MS.gene89961.t1 AT4G10400 27.804 428 270 13 9 424 2 402 1.31e-26 111
MS.gene89961.t1 AT4G10400 27.804 428 270 13 9 424 2 402 1.31e-26 111
MS.gene89961.t1 AT4G10400 27.804 428 270 13 9 424 2 402 1.31e-26 111
MS.gene89961.t1 AT4G14103 29.919 371 214 13 9 347 8 364 3.59e-25 107
MS.gene89961.t1 AT4G14103 29.919 371 214 13 9 347 8 364 3.59e-25 107
MS.gene89961.t1 AT4G14103 30.790 367 207 14 9 343 8 359 1.24e-24 106
MS.gene89961.t1 AT5G56380 25.799 438 278 13 9 418 2 420 1.42e-24 105
MS.gene89961.t1 AT5G56380 25.799 438 278 13 9 418 2 420 1.42e-24 105
MS.gene89961.t1 AT2G26860 29.340 409 260 14 9 402 2 396 2.78e-24 104
MS.gene89961.t1 AT2G26860 29.340 409 260 14 9 402 2 396 2.78e-24 104
MS.gene89961.t1 AT3G59190 30.000 370 202 13 9 335 12 367 3.55e-24 103
MS.gene89961.t1 AT4G26340 27.654 405 261 13 9 401 2 386 7.36e-24 103
MS.gene89961.t1 AT3G59190 30.000 370 202 13 9 335 12 367 8.43e-24 104
MS.gene89961.t1 AT5G62970 28.246 439 246 18 9 402 2 416 3.09e-23 102
MS.gene89961.t1 AT3G50710 27.529 425 253 17 9 407 2 397 7.54e-23 100
MS.gene89961.t1 AT1G51370 29.371 429 247 16 7 411 17 413 1.08e-22 100
MS.gene89961.t1 AT5G38590 26.977 430 262 15 9 416 2 401 1.21e-22 100
MS.gene89961.t1 AT4G26350 25.000 432 258 14 9 407 2 400 2.07e-22 99.4
MS.gene89961.t1 AT3G59230 27.517 447 265 15 9 407 12 447 9.25e-22 98.2
MS.gene89961.t1 AT5G41830 25.983 458 249 13 3 407 7 427 2.27e-21 97.1
MS.gene89961.t1 AT3G03040 27.424 361 221 6 9 335 2 355 5.10e-21 95.9
MS.gene89961.t1 AT1G55660 28.228 333 188 13 9 312 53 363 5.84e-21 94.4
MS.gene89961.t1 AT3G56780 26.572 493 263 19 11 430 9 475 6.58e-21 95.5
MS.gene89961.t1 AT3G59210 29.383 405 226 16 5 368 3 388 9.69e-21 95.1
MS.gene89961.t1 AT3G59210 29.383 405 226 16 5 368 3 388 9.69e-21 95.1
MS.gene89961.t1 AT3G59210 29.383 405 226 16 5 368 3 388 9.69e-21 95.1
MS.gene89961.t1 AT3G59210 29.383 405 226 16 5 368 3 388 9.69e-21 95.1
MS.gene89961.t1 AT3G59210 29.383 405 226 16 5 368 3 388 9.69e-21 95.1
MS.gene89961.t1 AT4G14096 26.591 440 266 19 9 412 8 426 1.24e-20 94.4
MS.gene89961.t1 AT4G14096 26.591 440 266 19 9 412 8 426 1.24e-20 94.4
MS.gene89961.t1 AT3G03030 27.568 370 216 10 9 336 2 361 2.93e-20 93.6
MS.gene89961.t1 AT5G56370 25.995 427 283 12 9 426 2 404 2.10e-19 90.5
MS.gene89961.t1 AT5G56370 25.995 427 283 12 9 426 2 404 2.10e-19 90.5
MS.gene89961.t1 AT5G38396 28.375 363 219 11 9 337 2 357 2.81e-19 90.5
MS.gene89961.t1 AT4G22280 30.137 438 252 20 9 424 2 407 1.90e-18 87.4
MS.gene89961.t1 AT1G51370 29.847 392 220 15 7 375 17 376 1.96e-18 87.4
MS.gene89961.t1 AT5G53840 28.806 427 237 20 7 402 16 406 2.12e-18 87.8
MS.gene89961.t1 AT3G59200 25.948 501 283 21 8 450 6 476 4.98e-18 87.0
MS.gene89961.t1 AT3G59160 26.055 403 228 13 9 351 13 405 5.59e-18 86.7
MS.gene89961.t1 AT5G56440 24.408 422 265 11 9 402 2 397 5.98e-18 86.3
MS.gene89961.t1 AT4G22280 32.184 348 198 17 9 337 2 330 7.23e-18 84.7
MS.gene89961.t1 AT4G13965 26.279 430 237 18 9 404 10 393 7.76e-18 85.9
MS.gene89961.t1 AT1G32375 25.858 437 262 17 9 418 2 403 9.70e-18 85.5
MS.gene89961.t1 AT1G32375 25.858 437 262 17 9 418 2 403 9.70e-18 85.5
MS.gene89961.t1 AT3G03030 28.349 321 182 9 9 287 2 316 1.42e-17 84.0
MS.gene89961.t1 AT5G60610 27.014 422 243 16 9 402 2 386 2.01e-17 84.3
MS.gene89961.t1 AT5G60610 27.014 422 243 16 9 402 2 386 2.01e-17 84.3
MS.gene89961.t1 AT4G00320 25.964 389 241 11 3 352 7 387 2.16e-17 84.7
MS.gene89961.t1 AT5G56420 27.166 427 237 19 8 402 5 389 4.71e-17 83.6
MS.gene89961.t1 AT5G56420 27.166 427 237 19 8 402 5 389 4.71e-17 83.6
MS.gene89961.t1 AT5G56420 27.166 427 237 19 8 402 5 389 4.71e-17 83.6
MS.gene89961.t1 AT5G41840 27.441 379 217 11 9 337 14 384 1.25e-16 82.8
MS.gene89961.t1 AT4G13960 28.022 364 212 12 9 337 2 350 1.73e-16 82.0
MS.gene89961.t1 AT4G13960 28.022 364 212 12 9 337 2 350 1.73e-16 82.0
MS.gene89961.t1 AT1G51370 36.905 168 89 6 7 169 17 172 2.02e-16 80.9
MS.gene89961.t1 AT3G56780 26.682 431 225 17 11 376 9 413 2.68e-16 81.3
MS.gene89961.t1 AT3G58860 27.606 355 219 12 6 337 4 343 2.98e-16 81.3
MS.gene89961.t1 AT5G22670 27.674 430 241 18 8 399 10 407 4.87e-16 80.5
MS.gene89961.t1 AT3G59200 27.926 376 207 16 8 337 6 363 5.61e-16 79.7
MS.gene89961.t1 AT3G26930 27.119 413 252 17 8 400 20 403 8.84e-16 79.7
MS.gene89961.t1 AT4G00160 26.588 425 269 15 9 414 16 416 8.88e-16 79.7
MS.gene89961.t1 AT1G52650 25.517 435 263 15 9 402 2 416 9.98e-16 79.7
MS.gene89961.t1 AT1G58310 25.000 484 284 16 9 424 8 480 1.22e-15 79.3
MS.gene89961.t1 AT3G59240 27.095 358 219 11 9 337 8 352 1.57e-15 79.0
MS.gene89961.t1 AT2G42730 27.804 428 261 18 9 402 5 418 1.66e-15 79.0
MS.gene89961.t1 AT1G55030 24.816 407 261 16 9 399 19 396 1.97e-15 78.6
MS.gene89961.t1 AT1G55030 24.816 407 261 16 9 399 9 386 2.02e-15 78.6
MS.gene89961.t1 AT1G66300 25.974 462 275 19 3 424 15 449 2.13e-15 78.6
MS.gene89961.t1 AT1G69630 27.642 369 216 13 2 337 11 361 2.35e-15 78.2
MS.gene89961.t1 AT3G52680 26.328 433 258 16 9 414 21 419 3.20e-15 77.8
MS.gene89961.t1 AT5G56560 26.351 444 280 17 6 429 2 418 3.54e-15 77.8
MS.gene89961.t1 AT2G04230 24.516 465 287 16 8 439 12 445 5.67e-15 77.0
MS.gene89961.t1 AT1G06630 30.278 360 200 15 9 337 12 351 8.06e-15 75.9
MS.gene89961.t1 AT1G06630 30.278 360 200 15 9 337 12 351 8.06e-15 75.9
MS.gene89961.t1 AT5G56820 25.234 428 267 16 9 418 15 407 8.92e-15 76.6
MS.gene89961.t1 AT3G62440 28.571 392 214 18 9 352 2 375 9.26e-15 76.6
MS.gene89961.t1 AT3G58880 27.072 362 218 12 9 337 3 351 9.84e-15 76.6
MS.gene89961.t1 AT5G18770 26.407 462 282 18 9 433 24 464 1.07e-14 76.6
MS.gene89961.t1 AT4G15060 26.389 360 216 13 6 337 23 361 1.11e-14 76.3
MS.gene89961.t1 AT3G58920 26.087 391 218 12 9 346 2 374 1.11e-14 76.3
MS.gene89961.t1 AT3G58900 27.033 418 236 12 9 376 2 400 1.32e-14 76.3
MS.gene89961.t1 AT1G06630 30.278 360 200 15 9 337 12 351 1.40e-14 75.9
MS.gene89961.t1 AT1G06630 30.278 360 200 15 9 337 12 351 1.40e-14 75.9
MS.gene89961.t1 AT1G06630 30.278 360 200 15 9 337 12 351 1.40e-14 75.9
MS.gene89961.t1 AT1G06630 30.278 360 200 15 9 337 12 351 1.40e-14 75.9
MS.gene89961.t1 AT1G78760 26.606 436 258 21 7 410 14 419 1.67e-14 75.9
MS.gene89961.t1 AT1G06630 30.278 360 200 15 9 337 12 351 1.70e-14 75.9
MS.gene89961.t1 AT1G06630 30.278 360 200 15 9 337 21 360 1.77e-14 75.5
MS.gene89961.t1 AT3G44060 28.763 372 208 18 14 351 4 352 2.68e-14 75.1
MS.gene89961.t1 AT5G38392 34.500 200 112 5 9 190 2 200 2.94e-14 72.0
MS.gene89961.t1 AT3G58960 27.005 374 204 15 9 337 2 351 3.08e-14 75.1
MS.gene89961.t1 AT5G38590 35.000 160 94 4 9 163 2 156 3.32e-14 73.6
MS.gene89961.t1 AT3G26930 26.234 385 235 17 36 400 3 358 3.34e-14 74.7
MS.gene89961.t1 AT2G42720 30.000 370 191 18 9 336 2 345 5.35e-14 74.3
MS.gene89961.t1 AT1G78750 26.230 366 218 14 9 337 18 368 5.38e-14 74.3
MS.gene89961.t1 AT1G78750 26.230 366 218 14 9 337 18 368 5.38e-14 74.3
MS.gene89961.t1 AT4G09920 35.000 160 98 4 9 164 2 159 5.94e-14 73.2
MS.gene89961.t1 AT4G09920 35.000 160 98 4 9 164 2 159 5.94e-14 73.2
MS.gene89961.t1 AT5G18780 26.577 444 258 19 9 416 11 422 6.95e-14 73.9
MS.gene89961.t1 AT5G18780 26.577 444 258 19 9 416 11 422 6.95e-14 73.9
MS.gene89961.t1 AT2G29930 28.022 364 199 16 9 337 12 347 7.18e-14 73.9
MS.gene89961.t1 AT2G29930 28.022 364 199 16 9 337 12 347 7.18e-14 73.9
MS.gene89961.t1 AT4G09920 35.000 160 98 4 9 164 2 159 7.49e-14 72.4
MS.gene89961.t1 AT4G09920 35.000 160 98 4 9 164 2 159 7.49e-14 72.4
MS.gene89961.t1 AT4G09920 35.000 160 98 4 9 164 2 159 7.49e-14 72.4
MS.gene89961.t1 AT5G44490 25.734 443 270 17 4 411 12 430 1.07e-13 73.2
MS.gene89961.t1 AT2G26030 26.932 427 258 20 9 400 4 411 1.11e-13 73.2
MS.gene89961.t1 AT5G44490 25.734 443 270 17 4 411 12 430 1.22e-13 73.2
MS.gene89961.t1 AT5G38590 29.444 180 106 3 9 186 2 162 1.43e-13 71.2
MS.gene89961.t1 AT5G53635 25.977 435 260 20 11 409 2 410 1.73e-13 72.4
MS.gene89961.t1 AT3G58930 25.455 385 213 12 9 337 2 368 1.85e-13 72.8
MS.gene89961.t1 AT3G58930 25.455 385 213 12 9 337 2 368 1.85e-13 72.8
MS.gene89961.t1 AT3G58930 25.455 385 213 12 9 337 2 368 1.85e-13 72.8
MS.gene89961.t1 AT5G38390 25.858 437 255 19 9 403 2 411 2.10e-13 72.4
MS.gene89961.t1 AT2G26030 27.123 424 256 20 9 400 4 406 2.15e-13 72.4
MS.gene89961.t1 AT2G26030 27.123 424 256 20 9 400 4 406 2.15e-13 72.4
MS.gene89961.t1 AT4G15060 26.821 302 183 10 9 285 172 460 2.75e-13 72.4
MS.gene89961.t1 AT1G16930 27.273 440 241 21 9 414 15 409 3.41e-13 71.6
MS.gene89961.t1 AT1G16930 27.273 440 241 21 9 414 15 409 3.41e-13 71.6
MS.gene89961.t1 AT1G16930 27.273 440 241 21 9 414 15 409 3.41e-13 71.6
MS.gene89961.t1 AT5G38386 23.529 340 206 9 9 337 2 298 3.66e-13 71.2
MS.gene89961.t1 AT5G38386 23.529 340 206 9 9 337 2 298 3.66e-13 71.2
MS.gene89961.t1 AT4G13985 27.747 364 223 13 4 337 14 367 3.75e-13 71.6
MS.gene89961.t1 AT5G44950 26.603 421 263 18 9 402 4 405 4.35e-13 71.2
MS.gene89961.t1 AT1G66290 26.316 437 245 18 4 402 24 421 4.85e-13 71.2
MS.gene89961.t1 AT3G59150 27.832 309 176 12 9 281 13 310 5.02e-13 71.2
MS.gene89961.t1 AT3G14710 26.862 443 275 15 3 424 20 434 6.08e-13 70.9
MS.gene89961.t1 AT3G56780 33.136 169 100 5 11 175 9 168 8.68e-13 70.1
MS.gene89961.t1 AT3G42770 30.820 305 161 12 14 285 4 291 9.74e-13 70.5
MS.gene89961.t1 AT3G58940 25.562 356 218 10 9 337 2 337 1.31e-12 70.1
MS.gene89961.t1 AT3G58940 25.562 356 218 10 9 337 2 337 1.31e-12 70.1
MS.gene89961.t1 AT3G49150 24.892 462 304 14 7 433 14 467 1.42e-12 69.7
MS.gene89961.t1 AT5G56690 27.778 414 259 17 11 402 4 399 1.85e-12 69.3
MS.gene89961.t1 AT5G22610 27.083 432 261 20 8 416 17 417 2.65e-12 68.9
MS.gene89961.t1 AT5G38570 28.205 312 157 12 9 281 2 285 2.86e-12 68.6
MS.gene89961.t1 AT3G59000 35.714 154 83 7 9 149 2 152 3.04e-12 68.2
MS.gene89961.t1 AT3G59000 34.659 176 98 6 9 169 2 175 3.91e-12 68.6
MS.gene89961.t1 AT5G22730 25.641 429 260 16 8 400 27 432 4.11e-12 68.6
MS.gene89961.t1 AT5G22730 25.641 429 260 16 8 400 27 432 4.11e-12 68.6
MS.gene89961.t1 AT5G22700 26.790 433 245 19 7 399 41 441 5.10e-12 68.2
MS.gene89961.t1 AT5G22700 26.790 433 245 19 7 399 4 404 6.30e-12 67.8
MS.gene89961.t1 AT5G22700 26.790 433 245 19 7 399 4 404 6.30e-12 67.8
MS.gene89961.t1 AT5G22700 26.790 433 245 19 7 399 4 404 6.30e-12 67.8
MS.gene89961.t1 AT5G22700 26.790 433 245 19 7 399 4 404 6.30e-12 67.8
MS.gene89961.t1 AT5G56370 27.219 338 213 12 9 337 2 315 7.11e-12 66.6
MS.gene89961.t1 AT3G58980 25.729 377 226 13 9 347 2 362 7.18e-12 67.8
MS.gene89961.t1 AT5G25860 27.202 386 223 18 9 350 12 383 7.64e-12 67.4
MS.gene89961.t1 AT5G56700 28.037 321 206 13 93 404 48 352 1.12e-11 66.6
MS.gene89961.t1 AT1G05080 26.128 421 261 15 8 402 12 408 1.56e-11 66.6
MS.gene89961.t1 AT3G58900 28.313 332 174 10 9 291 2 318 1.87e-11 65.5
MS.gene89961.t1 AT3G58900 28.313 332 174 10 9 291 2 318 1.87e-11 65.5
MS.gene89961.t1 AT3G58900 28.049 328 174 9 9 289 2 314 1.91e-11 65.5
MS.gene89961.t1 AT5G22610 26.009 446 278 18 8 416 17 447 1.97e-11 66.2
MS.gene89961.t1 AT5G18780 32.749 171 89 7 9 167 11 167 3.06e-11 65.1
MS.gene89961.t1 AT5G18780 32.749 171 89 7 9 167 11 167 3.06e-11 65.1
MS.gene89961.t1 AT3G51530 24.594 431 263 18 9 412 30 425 4.24e-11 65.1
MS.gene89961.t1 AT1G48400 25.316 395 207 13 9 337 10 382 4.84e-11 65.1
MS.gene89961.t1 AT5G25850 34.783 161 89 6 9 163 20 170 7.99e-11 64.3
MS.gene89961.t1 AT5G35995 26.050 357 217 15 9 337 5 342 8.85e-11 64.3
MS.gene89961.t1 AT5G35995 26.050 357 217 15 9 337 5 342 8.85e-11 64.3
MS.gene89961.t1 AT5G53640 31.288 163 104 5 7 167 20 176 8.89e-11 62.0

Find 84 sgRNAs with CRISPR-Local

Find 108 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCATTGCATTTGAATTTAA+AGG 0.125528 4.2:+47720919 MS.gene89961:CDS
ACTTAAGGATCTTGCAATTA+TGG 0.162434 4.2:+47720483 MS.gene89961:CDS
ATGTACAAATTTGATTTCTT+TGG 0.230513 4.2:-47719579 None:intergenic
AGAAATCCTCCTTACTAGTA+TGG 0.246783 4.2:+47721076 MS.gene89961:CDS
ACATGTTCTATAACACTCTT+TGG 0.268393 4.2:-47719471 None:intergenic
ATTGCAAGATCCTTAAGTTT+TGG 0.271802 4.2:-47720478 None:intergenic
TTCTCTTGTTGATGTTTCAT+TGG 0.279764 4.2:+47720078 MS.gene89961:CDS
TATAACACTCTTTGGTTGAT+AGG 0.294346 4.2:-47719463 None:intergenic
TAATTCAATTGAAGATCATT+TGG 0.321337 4.2:+47721353 MS.gene89961:CDS
AAAGTCAAGGTTGGGAATCT+TGG 0.353597 4.2:-47719525 None:intergenic
TCACAAGTTATTATATTTAA+CGG 0.359548 4.2:+47720399 MS.gene89961:CDS
TATCCTGTAACTAGATTAAG+AGG 0.361958 4.2:-47721409 None:intergenic
AGTTTCCAACCTCATTTCTT+CGG 0.365062 4.2:-47720849 None:intergenic
GATTATTCCTTACTTTATAT+AGG 0.375374 4.2:+47719996 MS.gene89961:CDS
GTTTCCAACCTCATTTCTTC+GGG 0.376468 4.2:-47720848 None:intergenic
ACAAAATGCTCCAAAACTTA+AGG 0.405643 4.2:+47720468 MS.gene89961:CDS
ACTCGTGGTCTTAAAATTGC+GGG 0.408358 4.2:+47719787 MS.gene89961:CDS
ATGAGGTTGGAAACTCTAGA+TGG 0.416736 4.2:+47720857 MS.gene89961:CDS
ACAGATCCAAGTCAAGTTCC+TGG 0.422138 4.2:-47719715 None:intergenic
CAAGGTCCAGGAACTTGACT+TGG 0.457085 4.2:+47719709 MS.gene89961:CDS
AAGTGAAAAGAGGTGTTGAT+AGG 0.462824 4.2:-47719965 None:intergenic
TGTAAGTCACTCAAATAAGT+TGG 0.467816 4.2:+47720984 MS.gene89961:CDS
TAAAGAGTATTCTATGTTTG+AGG 0.473169 4.2:+47719913 MS.gene89961:CDS
GGTAATTGAAAGTCAAGGTT+GGG 0.476845 4.2:-47719533 None:intergenic
AAGTAGGCCTATATAAAGTA+AGG 0.476895 4.2:-47720003 None:intergenic
GTATACAAATTGTTAAAATC+CGG 0.478212 4.2:-47720169 None:intergenic
AAATTCAAATGCAATGAGAC+TGG 0.478300 4.2:-47720914 None:intergenic
GGTGGTGTTCAATGAAATCT+TGG 0.480760 4.2:-47721382 None:intergenic
TTGATTTCTTTGGACAACTC+AGG 0.483223 4.2:-47719569 None:intergenic
GGCATTAGATCTCAAGGTCC+AGG 0.496808 4.2:+47719697 MS.gene89961:CDS
TCTTTGCATTTGTAAGCGTC+CGG 0.498367 4.2:+47720150 MS.gene89961:CDS
AATTTGTATACACTCTTGAA+AGG 0.500652 4.2:+47720181 MS.gene89961:CDS
GAAATCCTCCTTACTAGTAT+GGG 0.501373 4.2:+47721077 MS.gene89961:CDS
GTAACTAGATTAAGAGGGTC+GGG 0.502456 4.2:-47721403 None:intergenic
TGATTTCTTTGGACAACTCA+GGG 0.514750 4.2:-47719568 None:intergenic
AACTCAGGGTCTGAAATCTC+TGG 0.516045 4.2:-47719554 None:intergenic
TAGAATACGCCACAGTTTCA+CGG 0.516230 4.2:-47719877 None:intergenic
AAACTCTACCCATACTAGTA+AGG 0.521476 4.2:-47721085 None:intergenic
TCTCTTCAATAAGTGAAAAG+AGG 0.524063 4.2:-47719975 None:intergenic
TGTACACATGTGGGTTTCAA+AGG 0.528762 4.2:+47719676 MS.gene89961:CDS
AGAGAAACAACTTCAAGTGC+AGG 0.530138 4.2:-47720061 None:intergenic
TACTTTATATAGGCCTACTT+CGG 0.536022 4.2:+47720006 MS.gene89961:CDS
AATCAGTTCCCGAAGAAATG+AGG 0.538157 4.2:+47720840 MS.gene89961:CDS
CACTCGTGGTCTTAAAATTG+CGG 0.539007 4.2:+47719786 MS.gene89961:CDS
CATGTGTTCTATCCACAAGA+TGG 0.542093 4.2:+47719489 MS.gene89961:CDS
TTCAAAGGCATTAGATCTCA+AGG 0.542872 4.2:+47719691 MS.gene89961:CDS
GGTGGAGCCGTCAGTAACTC+CGG 0.547394 4.2:+47720879 MS.gene89961:CDS
TGGTAATTGAAAGTCAAGGT+TGG 0.551378 4.2:-47719534 None:intergenic
CTAAGTCTTGATAGCAACAA+AGG 0.551526 4.2:+47719638 MS.gene89961:CDS
CAACTCTTAATAACCGAAGT+AGG 0.552066 4.2:-47720019 None:intergenic
GAGAAACAACTTCAAGTGCA+GGG 0.552832 4.2:-47720060 None:intergenic
TGTTATGCAGTTTCTCAGCA+TGG 0.553413 4.2:+47720342 MS.gene89961:intron
AATGTCAGAACATTGGCTCT+CGG 0.568403 4.2:+47720211 MS.gene89961:CDS
GCAGGGGCATTAATTTGTAG+TGG 0.570310 4.2:-47720043 None:intergenic
GCAGATCGACTCCCATCTTG+TGG 0.572297 4.2:-47719501 None:intergenic
ATGTGTTCTATCCACAAGAT+GGG 0.579779 4.2:+47719490 MS.gene89961:CDS
AAATATCTGAGAATTGCAGT+TGG 0.586019 4.2:+47720425 MS.gene89961:CDS
ACTTTCTAATGTCAGAACAT+TGG 0.587029 4.2:+47720204 MS.gene89961:CDS
TGAAAAGAAGAATTGAGTGT+TGG 0.588267 4.2:-47719821 None:intergenic
AGACTGGTTGTAAGACATGC+CGG 0.589947 4.2:-47720898 None:intergenic
AGTTCCCGAAGAAATGAGGT+TGG 0.592639 4.2:+47720844 MS.gene89961:CDS
TCACTCAAATAAGTTGGAGA+AGG 0.595587 4.2:+47720990 MS.gene89961:CDS
TGTAACTAGATTAAGAGGGT+CGG 0.598827 4.2:-47721404 None:intergenic
TGAGGTTGGAAACTCTAGAT+GGG 0.616468 4.2:+47720858 MS.gene89961:CDS
CTCTACCCATACTAGTAAGG+AGG 0.626461 4.2:-47721082 None:intergenic
TTCCACGTGTGAGTCACTCG+TGG 0.631019 4.2:+47719772 MS.gene89961:CDS
TCTTCATCTCCGTGAAACTG+TGG 0.632446 4.2:+47719868 MS.gene89961:CDS
GCGTATTCTATGTTTGATGA+CGG 0.640607 4.2:+47719890 MS.gene89961:CDS
GGTGTTGATAGGTAATGCAA+AGG 0.643336 4.2:-47719954 None:intergenic
GCCACATGATGTACACATGT+GGG 0.650684 4.2:+47719667 MS.gene89961:CDS
AGACATGCCGGAGTTACTGA+CGG 0.652161 4.2:-47720886 None:intergenic
AGAAACAACTTCAAGTGCAG+GGG 0.652750 4.2:-47720059 None:intergenic
GGTTGGAAACTCTAGATGGG+TGG 0.653900 4.2:+47720861 MS.gene89961:CDS
ACATGTGTACATCATGTGGC+TGG 0.656362 4.2:-47719664 None:intergenic
AGATGAAGAATCTTTAGTGA+CGG 0.657169 4.2:-47719854 None:intergenic
ACCCACATGTGTACATCATG+TGG 0.672342 4.2:-47719668 None:intergenic
CTCGTGGTCTTAAAATTGCG+GGG 0.673910 4.2:+47719788 MS.gene89961:CDS
GACCACGAGTGACTCACACG+TGG 0.682798 4.2:-47719774 None:intergenic
AGCCACATGATGTACACATG+TGG 0.685172 4.2:+47719666 MS.gene89961:CDS
TCTCTGGTAATTGAAAGTCA+AGG 0.696256 4.2:-47719538 None:intergenic
TCACACGTGGAAAGCCTAAG+CGG 0.701582 4.2:-47719761 None:intergenic
TATGCAGTTTCTCAGCATGG+AGG 0.703511 4.2:+47720345 MS.gene89961:intron
ACTAGATTAAGAGGGTCGGG+TGG 0.718609 4.2:-47721400 None:intergenic
ATCCTGTAACTAGATTAAGA+GGG 0.720026 4.2:-47721408 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAATTAATTAAATTGTTTAT+CGG - chr4.2:47720640-47720659 None:intergenic 10.0%
!! TTTAAAAGATGAAATATAAT+AGG + chr4.2:47720550-47720569 MS.gene89961:intron 10.0%
!!! AAAATTCTAATAATATTTTC+TGG + chr4.2:47720795-47720814 MS.gene89961:intron 10.0%
!! TCACAAGTTATTATATTTAA+CGG + chr4.2:47720399-47720418 MS.gene89961:CDS 15.0%
!!! AATTATTCAATATTTGTTAC+AGG + chr4.2:47721326-47721345 MS.gene89961:intron 15.0%
!!! ACTTAGTTTTCTTATATTTT+CGG - chr4.2:47719624-47719643 None:intergenic 15.0%
!! AAGTAAAATAGTTTGAAAGA+AGG - chr4.2:47720714-47720733 None:intergenic 20.0%
!! GATTATTCCTTACTTTATAT+AGG + chr4.2:47719996-47720015 MS.gene89961:CDS 20.0%
!! GTATACAAATTGTTAAAATC+CGG - chr4.2:47720172-47720191 None:intergenic 20.0%
!! TAATTCAATTGAAGATCATT+TGG + chr4.2:47721353-47721372 MS.gene89961:CDS 20.0%
!! TATATATACAATTACATTCG+TGG + chr4.2:47721228-47721247 MS.gene89961:intron 20.0%
!!! ATGTACAAATTTGATTTCTT+TGG - chr4.2:47719582-47719601 None:intergenic 20.0%
!!! TATTATTAGAATTTTCCAAC+TGG - chr4.2:47720790-47720809 None:intergenic 20.0%
!!! TTTGTAAAGTCATATTTTCT+AGG - chr4.2:47720106-47720125 None:intergenic 20.0%
! AATGAGAATAGAATTGCATA+TGG - chr4.2:47720313-47720332 None:intergenic 25.0%
! AATTTGTATACACTCTTGAA+AGG + chr4.2:47720181-47720200 MS.gene89961:CDS 25.0%
! AGTTTGAAAGAAGGTTAAAT+TGG - chr4.2:47720705-47720724 None:intergenic 25.0%
! ATGAGAATAGAATTGCATAT+GGG - chr4.2:47720312-47720331 None:intergenic 25.0%
! CTATTTACTATATATCCAGT+TGG + chr4.2:47720772-47720791 MS.gene89961:intron 25.0%
! CTCATTGCATTTGAATTTAA+AGG + chr4.2:47720919-47720938 MS.gene89961:CDS 25.0%
! GTTTGAAAGAAGGTTAAATT+GGG - chr4.2:47720704-47720723 None:intergenic 25.0%
! TCAAAACATAAAAACTGAGT+TGG + chr4.2:47720945-47720964 MS.gene89961:CDS 25.0%
!! AAAAAATATTATTGCCGCTT+AGG + chr4.2:47719747-47719766 MS.gene89961:CDS 25.0%
!! GAAAGTATATAAACTCTGTA+TGG - chr4.2:47721128-47721147 None:intergenic 25.0%
!!! TAAAGAGTATTCTATGTTTG+AGG + chr4.2:47719913-47719932 MS.gene89961:CDS 25.0%
AAATATCTGAGAATTGCAGT+TGG + chr4.2:47720425-47720444 MS.gene89961:CDS 30.0%
AAATTCAAATGCAATGAGAC+TGG - chr4.2:47720917-47720936 None:intergenic 30.0%
AAGTAGGCCTATATAAAGTA+AGG - chr4.2:47720006-47720025 None:intergenic 30.0%
ACAAAATGCTCCAAAACTTA+AGG + chr4.2:47720468-47720487 MS.gene89961:CDS 30.0%
ACATGTTCTATAACACTCTT+TGG - chr4.2:47719474-47719493 None:intergenic 30.0%
ACTTAAGGATCTTGCAATTA+TGG + chr4.2:47720483-47720502 MS.gene89961:CDS 30.0%
ACTTTCTAATGTCAGAACAT+TGG + chr4.2:47720204-47720223 MS.gene89961:CDS 30.0%
AGATGAAGAATCTTTAGTGA+CGG - chr4.2:47719857-47719876 None:intergenic 30.0%
AGTAGAAAAAAGTTTACGCA+TGG + chr4.2:47721047-47721066 MS.gene89961:CDS 30.0%
ATATAATAGGCTCAAAAGTC+TGG + chr4.2:47720563-47720582 MS.gene89961:intron 30.0%
GACATATAAAGTTGTGTTGA+TGG - chr4.2:47721199-47721218 None:intergenic 30.0%
GTAGAAAAAAGTTTACGCAT+GGG + chr4.2:47721048-47721067 MS.gene89961:CDS 30.0%
TACTTTATATAGGCCTACTT+CGG + chr4.2:47720006-47720025 MS.gene89961:CDS 30.0%
TAGAAAAAAGTTTACGCATG+GGG + chr4.2:47721049-47721068 MS.gene89961:CDS 30.0%
TATAACACTCTTTGGTTGAT+AGG - chr4.2:47719466-47719485 None:intergenic 30.0%
TCTCTTCAATAAGTGAAAAG+AGG - chr4.2:47719978-47719997 None:intergenic 30.0%
TGAAAAGAAGAATTGAGTGT+TGG - chr4.2:47719824-47719843 None:intergenic 30.0%
TGTAAGTCACTCAAATAAGT+TGG + chr4.2:47720984-47721003 MS.gene89961:CDS 30.0%
TTCTCTTGTTGATGTTTCAT+TGG + chr4.2:47720078-47720097 MS.gene89961:CDS 30.0%
! AATATCTAGAACAATGAGAG+AGG - chr4.2:47721168-47721187 None:intergenic 30.0%
! ATTGCAAGATCCTTAAGTTT+TGG - chr4.2:47720481-47720500 None:intergenic 30.0%
!! TATAAAGTTGTGTTGATGGT+CGG - chr4.2:47721195-47721214 None:intergenic 30.0%
!!! GCGGCAATAATATTTTTTCA+TGG - chr4.2:47719745-47719764 None:intergenic 30.0%
AAACTCTACCCATACTAGTA+AGG - chr4.2:47721088-47721107 None:intergenic 35.0%
AAGACTTGGCGAAATATACA+TGG + chr4.2:47720599-47720618 MS.gene89961:intron 35.0%
AGAAATCCTCCTTACTAGTA+TGG + chr4.2:47721076-47721095 MS.gene89961:CDS 35.0%
AGTTTCCAACCTCATTTCTT+CGG - chr4.2:47720852-47720871 None:intergenic 35.0%
ATGTGTTCTATCCACAAGAT+GGG + chr4.2:47719490-47719509 MS.gene89961:CDS 35.0%
CAACTCTTAATAACCGAAGT+AGG - chr4.2:47720022-47720041 None:intergenic 35.0%
GAAATCCTCCTTACTAGTAT+GGG + chr4.2:47721077-47721096 MS.gene89961:CDS 35.0%
GCGTATTCTATGTTTGATGA+CGG + chr4.2:47719890-47719909 MS.gene89961:CDS 35.0%
GGTAATTGAAAGTCAAGGTT+GGG - chr4.2:47719536-47719555 None:intergenic 35.0%
TCTCTGGTAATTGAAAGTCA+AGG - chr4.2:47719541-47719560 None:intergenic 35.0%
TGAAAGAAGGTTAAATTGGG+AGG - chr4.2:47720701-47720720 None:intergenic 35.0%
TGATTTCTTTGGACAACTCA+GGG - chr4.2:47719571-47719590 None:intergenic 35.0%
TGCATATGGGAGACTAAATA+TGG - chr4.2:47720299-47720318 None:intergenic 35.0%
TGGTAATTGAAAGTCAAGGT+TGG - chr4.2:47719537-47719556 None:intergenic 35.0%
TTGATTTCTTTGGACAACTC+AGG - chr4.2:47719572-47719591 None:intergenic 35.0%
! CTAAGTCTTGATAGCAACAA+AGG + chr4.2:47719638-47719657 MS.gene89961:CDS 35.0%
! TCACTCAAATAAGTTGGAGA+AGG + chr4.2:47720990-47721009 MS.gene89961:CDS 35.0%
!! AAGTGAAAAGAGGTGTTGAT+AGG - chr4.2:47719968-47719987 None:intergenic 35.0%
!! TTCAAAGGCATTAGATCTCA+AGG + chr4.2:47719691-47719710 MS.gene89961:CDS 35.0%
AAAGTCAAGGTTGGGAATCT+TGG - chr4.2:47719528-47719547 None:intergenic 40.0%
AATCAGTTCCCGAAGAAATG+AGG + chr4.2:47720840-47720859 MS.gene89961:CDS 40.0%
AGAAACAACTTCAAGTGCAG+GGG - chr4.2:47720062-47720081 None:intergenic 40.0%
AGAGAAACAACTTCAAGTGC+AGG - chr4.2:47720064-47720083 None:intergenic 40.0%
ATGAGGTTGGAAACTCTAGA+TGG + chr4.2:47720857-47720876 MS.gene89961:CDS 40.0%
CATGTGTTCTATCCACAAGA+TGG + chr4.2:47719489-47719508 MS.gene89961:CDS 40.0%
GAGAAACAACTTCAAGTGCA+GGG - chr4.2:47720063-47720082 None:intergenic 40.0%
GGTGGTGTTCAATGAAATCT+TGG - chr4.2:47721385-47721404 None:intergenic 40.0%
GTTTCCAACCTCATTTCTTC+GGG - chr4.2:47720851-47720870 None:intergenic 40.0%
TAGAATACGCCACAGTTTCA+CGG - chr4.2:47719880-47719899 None:intergenic 40.0%
TCTTTGCATTTGTAAGCGTC+CGG + chr4.2:47720150-47720169 MS.gene89961:CDS 40.0%
TGAGGTTGGAAACTCTAGAT+GGG + chr4.2:47720858-47720877 MS.gene89961:CDS 40.0%
TGTACACATGTGGGTTTCAA+AGG + chr4.2:47719676-47719695 MS.gene89961:CDS 40.0%
TGTTATGCAGTTTCTCAGCA+TGG + chr4.2:47720342-47720361 MS.gene89961:intron 40.0%
! ACTCGTGGTCTTAAAATTGC+GGG + chr4.2:47719787-47719806 MS.gene89961:CDS 40.0%
! CACTCGTGGTCTTAAAATTG+CGG + chr4.2:47719786-47719805 MS.gene89961:CDS 40.0%
!! AATGTCAGAACATTGGCTCT+CGG + chr4.2:47720211-47720230 MS.gene89961:CDS 40.0%
!! GGTGTTGATAGGTAATGCAA+AGG - chr4.2:47719957-47719976 None:intergenic 40.0%
ACAGATCCAAGTCAAGTTCC+TGG - chr4.2:47719718-47719737 None:intergenic 45.0%
ACATGTGTACATCATGTGGC+TGG - chr4.2:47719667-47719686 None:intergenic 45.0%
ACCCACATGTGTACATCATG+TGG - chr4.2:47719671-47719690 None:intergenic 45.0%
AGCCACATGATGTACACATG+TGG + chr4.2:47719666-47719685 MS.gene89961:CDS 45.0%
AGTTCCCGAAGAAATGAGGT+TGG + chr4.2:47720844-47720863 MS.gene89961:CDS 45.0%
CTCTACCCATACTAGTAAGG+AGG - chr4.2:47721085-47721104 None:intergenic 45.0%
GCACTAGAAGAGCAAAGACT+TGG + chr4.2:47720585-47720604 MS.gene89961:intron 45.0%
GCCACATGATGTACACATGT+GGG + chr4.2:47719667-47719686 MS.gene89961:CDS 45.0%
TATGCAGTTTCTCAGCATGG+AGG + chr4.2:47720345-47720364 MS.gene89961:intron 45.0%
TCTTCATCTCCGTGAAACTG+TGG + chr4.2:47719868-47719887 MS.gene89961:CDS 45.0%
! AACTCAGGGTCTGAAATCTC+TGG - chr4.2:47719557-47719576 None:intergenic 45.0%
! AGACTGGTTGTAAGACATGC+CGG - chr4.2:47720901-47720920 None:intergenic 45.0%
! CTCGTGGTCTTAAAATTGCG+GGG + chr4.2:47719788-47719807 MS.gene89961:CDS 45.0%
!! GCAGGGGCATTAATTTGTAG+TGG - chr4.2:47720046-47720065 None:intergenic 45.0%
AGACATGCCGGAGTTACTGA+CGG - chr4.2:47720889-47720908 None:intergenic 50.0%
CAAGGTCCAGGAACTTGACT+TGG + chr4.2:47719709-47719728 MS.gene89961:CDS 50.0%
GGCATTAGATCTCAAGGTCC+AGG + chr4.2:47719697-47719716 MS.gene89961:CDS 50.0%
GGTTGGAAACTCTAGATGGG+TGG + chr4.2:47720861-47720880 MS.gene89961:CDS 50.0%
TCACACGTGGAAAGCCTAAG+CGG - chr4.2:47719764-47719783 None:intergenic 50.0%
TTCCACGTGTGAGTCACTCG+TGG + chr4.2:47719772-47719791 MS.gene89961:CDS 55.0%
! GCAGATCGACTCCCATCTTG+TGG - chr4.2:47719504-47719523 None:intergenic 55.0%
GACCACGAGTGACTCACACG+TGG - chr4.2:47719777-47719796 None:intergenic 60.0%
GGTGGAGCCGTCAGTAACTC+CGG + chr4.2:47720879-47720898 MS.gene89961:CDS 60.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 47719389 47721416 47719389 ID=MS.gene89961
chr4.2 mRNA 47719389 47721416 47719389 ID=MS.gene89961.t1;Parent=MS.gene89961
chr4.2 exon 47719389 47720249 47719389 ID=MS.gene89961.t1.exon1;Parent=MS.gene89961.t1
chr4.2 CDS 47719389 47720249 47719389 ID=cds.MS.gene89961.t1;Parent=MS.gene89961.t1
chr4.2 exon 47720352 47720504 47720352 ID=MS.gene89961.t1.exon2;Parent=MS.gene89961.t1
chr4.2 CDS 47720352 47720504 47720352 ID=cds.MS.gene89961.t1;Parent=MS.gene89961.t1
chr4.2 exon 47720829 47721098 47720829 ID=MS.gene89961.t1.exon3;Parent=MS.gene89961.t1
chr4.2 CDS 47720829 47721098 47720829 ID=cds.MS.gene89961.t1;Parent=MS.gene89961.t1
chr4.2 exon 47721348 47721416 47721348 ID=MS.gene89961.t1.exon4;Parent=MS.gene89961.t1
chr4.2 CDS 47721348 47721416 47721348 ID=cds.MS.gene89961.t1;Parent=MS.gene89961.t1
Gene Sequence

>MS.gene89961

ATGGCGTGCTCTGATGAAAAACATGATCGATTAAGCAATCTCTCAGACGATTTGATTTGTCGTATTTTGTCTTTCCTATCAACCAAAGAGTGTTATAGAACATGTGTTCTATCCACAAGATGGGAGTCGATCTGCACCAAGATTCCCAACCTTGACTTTCAATTACCAGAGATTTCAGACCCTGAGTTGTCCAAAGAAATCAAATTTGTACATGTTGCTCTCTTAAGACGCTCCGAAAATATAAGAAAACTAAGTCTTGATAGCAACAAAGGCTGCCAGCCACATGATGTACACATGTGGGTTTCAAAGGCATTAGATCTCAAGGTCCAGGAACTTGACTTGGATCTGTTTCTCCATGAAAAAATATTATTGCCGCTTAGGCTTTCCACGTGTGAGTCACTCGTGGTCTTAAAATTGCGGGGCAGAATTCAACCAACACTCAATTCTTCTTTTCATGTATATTTACCGTCACTAAAGATTCTTCATCTCCGTGAAACTGTGGCGTATTCTATGTTTGATGACGGTAAAGAGTATTCTATGTTTGAGGAACTTCTTTTACATGAGACCTTTGCATTACCTATCAACACCTCTTTTCACTTATTGAAGAGATTATTCCTTACTTTATATAGGCCTACTTCGGTTATTAAGAGTTGTCCACTACAAATTAATGCCCCTGCACTTGAAGTTGTTTCTCTTGTTGATGTTTCATTGGCTCCTAGAAAATATGACTTTACAAACTTGTCAAATCTTGATGAAGCTGCTCTTTGCATTTGTAAGCGTCCGGATTTTAACAATTTGTATACACTCTTGAAAGGACTTTCTAATGTCAGAACATTGGCTCTCGGTTCTAAAACTTTTCATGTAAGTTTCATAAATATTTTTCTTTTTTAATTAAAATTTACAAGTTCCATATTTAGTCTCCCATATGCAATTCTATTCTCATTTTATAATTTTGTTATGCAGTTTCTCAGCATGGAGGACAAACTTGACAACTTGCATCTTCTCACTTTTCACAAGTTATTATATTTAACGGTTGAAATATCTGAGAATTGCAGTTGGAATATGCTCGTCAGCTTTCTACAAAATGCTCCAAAACTTAAGGATCTTGCAATTATGGTGTGTATGATGTTCTTTTAACTATATTTGCACAATATATTTTTTTTTAAAAGATGAAATATAATAGGCTCAAAAGTCTGGCACTAGAAGAGCAAAGACTTGGCGAAATATACATGGAGTTTGCAAATAAAACCGATAAACAATTTAATTAATTCTAAACAATCTATATCTGATCTATGTTTGTGTAGATTTTCCTCCCAATTTAACCTTCTTTCAAACTATTTTACTTTCAATTTTATCTTTATTTACTTAATAATATAATTGAAACTATTTACTATATATCCAGTTGGAAAATTCTAATAATATTTTCTGGTTTTCTTGCAGAGAAAAATTGAAATCAGTTCCCGAAGAAATGAGGTTGGAAACTCTAGATGGGTGGAGCCGTCAGTAACTCCGGCATGTCTTACAACCAGTCTCATTGCATTTGAATTTAAAGGAATTCAAAACATAAAAACTGAGTTGGACTTTACGCGATATATTGTAAGTCACTCAAATAAGTTGGAGAAGGTAAAGATTTTCACATCTACTGCAAAGAAAAGAAGAGTAGAAAAAAGTTTACGCATGGGGTCAAAGAAATCCTCCTTACTAGTATGGGTAGAGTTTACACACATTCTTTTATTCCATACAGAGTTTATATACTTTCTGTTTTAGAACTTTCATCCTCTCTCATTGTTCTAGATATTAACTCCGACCATCAACACAACTTTATATGTCTTGAATTTATATATATACAATTACATTCGTGGTTGAGAATAAGACTGTTTTTGTTAAAATAAATATACTCTAATGAATTTATCATTTATGTTTATAATCTTAAAATTAATTATTCAATATTTGTTACAGGATATTAATTCAATTGAAGATCATTTGGATTTCTCCAAGATTTCATTGAACACCACCCGACCCTCTTAA

Protein sequence

>MS.gene89961.t1

MACSDEKHDRLSNLSDDLICRILSFLSTKECYRTCVLSTRWESICTKIPNLDFQLPEISDPELSKEIKFVHVALLRRSENIRKLSLDSNKGCQPHDVHMWVSKALDLKVQELDLDLFLHEKILLPLRLSTCESLVVLKLRGRIQPTLNSSFHVYLPSLKILHLRETVAYSMFDDGKEYSMFEELLLHETFALPINTSFHLLKRLFLTLYRPTSVIKSCPLQINAPALEVVSLVDVSLAPRKYDFTNLSNLDEAALCICKRPDFNNLYTLLKGLSNVRTLALGSKTFHFLSMEDKLDNLHLLTFHKLLYLTVEISENCSWNMLVSFLQNAPKLKDLAIMRKIEISSRRNEVGNSRWVEPSVTPACLTTSLIAFEFKGIQNIKTELDFTRYIVSHSNKLEKVKIFTSTAKKRRVEKSLRMGSKKSSLLVWDINSIEDHLDFSKISLNTTRPS