Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89961.t1 | XP_013455876.2 | 87.6 | 459 | 48 | 1 | 1 | 450 | 1 | 459 | 1.10E-225 | 792.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89961.t1 | Q3EAE5 | 28.5 | 438 | 262 | 18 | 9 | 413 | 2 | 421 | 7.9e-26 | 119.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89961.t1 | A0A072ULI1 | 87.6 | 459 | 48 | 1 | 1 | 450 | 1 | 459 | 8.2e-226 | 792.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89961.t1 | MTR_4g056020 | 87.582 | 459 | 48 | 1 | 1 | 450 | 1 | 459 | 0.0 | 808 |
MS.gene89961.t1 | MTR_4g055990 | 78.643 | 501 | 56 | 4 | 1 | 450 | 1 | 501 | 0.0 | 746 |
MS.gene89961.t1 | MTR_4g056030 | 82.327 | 447 | 70 | 1 | 1 | 438 | 1 | 447 | 0.0 | 731 |
MS.gene89961.t1 | MTR_4g055990 | 77.282 | 493 | 58 | 6 | 1 | 442 | 1 | 490 | 0.0 | 712 |
MS.gene89961.t1 | MTR_4g055580 | 76.423 | 492 | 69 | 4 | 1 | 446 | 92 | 582 | 0.0 | 708 |
MS.gene89961.t1 | MTR_4g056040 | 75.161 | 467 | 77 | 2 | 1 | 428 | 1 | 467 | 0.0 | 686 |
MS.gene89961.t1 | MTR_4g056070 | 73.684 | 437 | 66 | 2 | 1 | 388 | 1 | 437 | 0.0 | 623 |
MS.gene89961.t1 | MTR_1g038710 | 66.295 | 448 | 134 | 4 | 1 | 433 | 11 | 456 | 0.0 | 553 |
MS.gene89961.t1 | MTR_1g090883 | 61.190 | 353 | 124 | 4 | 2 | 343 | 12 | 362 | 1.79e-136 | 397 |
MS.gene89961.t1 | MTR_7g110920 | 52.514 | 358 | 104 | 6 | 99 | 428 | 1 | 320 | 2.35e-110 | 328 |
MS.gene89961.t1 | MTR_4g056020 | 88.957 | 163 | 18 | 0 | 288 | 450 | 1 | 163 | 2.92e-100 | 296 |
MS.gene89961.t1 | MTR_4g093690 | 53.309 | 272 | 109 | 7 | 1 | 259 | 10 | 276 | 3.50e-76 | 239 |
MS.gene89961.t1 | MTR_1g090900 | 66.667 | 177 | 56 | 2 | 1 | 174 | 1 | 177 | 2.53e-68 | 216 |
MS.gene89961.t1 | MTR_4g056010 | 89.899 | 99 | 10 | 0 | 69 | 167 | 2 | 100 | 3.53e-56 | 181 |
MS.gene89961.t1 | MTR_5g084070 | 30.383 | 418 | 249 | 15 | 5 | 407 | 9 | 399 | 8.70e-31 | 123 |
MS.gene89961.t1 | MTR_1g090890 | 60.440 | 91 | 30 | 2 | 341 | 428 | 29 | 116 | 4.38e-28 | 107 |
MS.gene89961.t1 | MTR_5g080710 | 30.788 | 419 | 236 | 17 | 9 | 403 | 33 | 421 | 6.22e-25 | 107 |
MS.gene89961.t1 | MTR_8g062270 | 30.000 | 420 | 257 | 16 | 9 | 402 | 16 | 424 | 9.75e-25 | 106 |
MS.gene89961.t1 | MTR_4g032730 | 28.989 | 445 | 226 | 22 | 9 | 394 | 15 | 428 | 3.72e-24 | 105 |
MS.gene89961.t1 | MTR_8g467800 | 30.843 | 415 | 241 | 14 | 5 | 391 | 16 | 412 | 1.47e-23 | 103 |
MS.gene89961.t1 | MTR_1g041245 | 27.696 | 408 | 223 | 15 | 9 | 405 | 11 | 357 | 3.87e-23 | 100 |
MS.gene89961.t1 | MTR_7g056433 | 26.376 | 436 | 246 | 20 | 4 | 424 | 7 | 382 | 6.29e-22 | 97.4 |
MS.gene89961.t1 | MTR_8g468810 | 27.540 | 443 | 275 | 16 | 4 | 417 | 20 | 445 | 1.45e-21 | 97.1 |
MS.gene89961.t1 | MTR_8g445780 | 28.856 | 402 | 238 | 12 | 9 | 387 | 13 | 389 | 2.62e-21 | 95.9 |
MS.gene89961.t1 | MTR_1g053025 | 25.517 | 435 | 251 | 15 | 9 | 424 | 2 | 382 | 1.06e-20 | 94.0 |
MS.gene89961.t1 | MTR_8g058970 | 27.872 | 470 | 273 | 16 | 4 | 425 | 14 | 465 | 1.90e-20 | 94.0 |
MS.gene89961.t1 | MTR_7g007340 | 27.477 | 444 | 229 | 16 | 4 | 439 | 8 | 366 | 2.03e-20 | 92.8 |
MS.gene89961.t1 | MTR_2g083840 | 29.298 | 413 | 246 | 17 | 9 | 394 | 21 | 414 | 2.12e-20 | 93.6 |
MS.gene89961.t1 | MTR_8g014260 | 28.046 | 435 | 256 | 17 | 6 | 407 | 13 | 423 | 6.50e-20 | 92.0 |
MS.gene89961.t1 | MTR_2g007400 | 25.541 | 462 | 235 | 21 | 9 | 431 | 12 | 403 | 1.45e-19 | 90.9 |
MS.gene89961.t1 | MTR_7g098570 | 26.316 | 399 | 231 | 12 | 9 | 402 | 20 | 360 | 2.80e-19 | 90.5 |
MS.gene89961.t1 | MTR_2g007450 | 24.424 | 434 | 251 | 16 | 1 | 404 | 8 | 394 | 5.16e-19 | 89.4 |
MS.gene89961.t1 | MTR_5g008950 | 25.917 | 409 | 217 | 14 | 11 | 405 | 1 | 337 | 6.40e-19 | 88.6 |
MS.gene89961.t1 | MTR_7g007080 | 26.562 | 448 | 235 | 18 | 7 | 429 | 2 | 380 | 6.41e-19 | 88.6 |
MS.gene89961.t1 | MTR_7g098510 | 25.829 | 422 | 240 | 14 | 7 | 418 | 16 | 374 | 1.14e-18 | 87.8 |
MS.gene89961.t1 | MTR_6g045333 | 25.926 | 405 | 237 | 13 | 9 | 402 | 61 | 413 | 1.25e-18 | 88.2 |
MS.gene89961.t1 | MTR_2g005990 | 24.670 | 454 | 233 | 20 | 9 | 424 | 6 | 388 | 1.44e-18 | 87.8 |
MS.gene89961.t1 | MTR_3g108560 | 28.899 | 436 | 219 | 19 | 6 | 425 | 17 | 377 | 1.88e-18 | 87.4 |
MS.gene89961.t1 | MTR_3g107100 | 26.471 | 408 | 232 | 14 | 5 | 402 | 7 | 356 | 1.89e-18 | 87.4 |
MS.gene89961.t1 | MTR_8g468840 | 26.777 | 422 | 268 | 15 | 8 | 402 | 13 | 420 | 9.91e-18 | 85.5 |
MS.gene89961.t1 | MTR_3g082890 | 27.053 | 414 | 232 | 16 | 6 | 402 | 94 | 454 | 2.65e-17 | 84.3 |
MS.gene89961.t1 | MTR_8g468810 | 28.904 | 301 | 180 | 11 | 4 | 281 | 20 | 309 | 1.02e-15 | 78.6 |
MS.gene89961.t1 | MTR_8g467800 | 31.908 | 304 | 172 | 9 | 5 | 285 | 16 | 307 | 1.10e-15 | 78.6 |
MS.gene89961.t1 | MTR_3g108150 | 25.408 | 429 | 246 | 14 | 9 | 424 | 13 | 380 | 1.26e-15 | 78.6 |
MS.gene89961.t1 | MTR_8g468810 | 28.904 | 301 | 180 | 11 | 4 | 281 | 20 | 309 | 1.27e-15 | 78.2 |
MS.gene89961.t1 | MTR_8g468810 | 28.255 | 361 | 219 | 14 | 4 | 337 | 20 | 367 | 1.45e-15 | 78.6 |
MS.gene89961.t1 | MTR_8g468810 | 28.904 | 301 | 180 | 11 | 4 | 281 | 20 | 309 | 1.76e-15 | 77.8 |
MS.gene89961.t1 | MTR_7g026500 | 23.765 | 425 | 239 | 14 | 8 | 411 | 13 | 373 | 2.84e-15 | 77.8 |
MS.gene89961.t1 | MTR_7g098480 | 26.238 | 404 | 227 | 13 | 7 | 402 | 16 | 356 | 4.08e-15 | 77.8 |
MS.gene89961.t1 | MTR_2g008320 | 25.400 | 437 | 246 | 18 | 9 | 427 | 52 | 426 | 4.27e-15 | 77.4 |
MS.gene89961.t1 | MTR_7g033945 | 34.884 | 172 | 88 | 7 | 9 | 165 | 11 | 173 | 8.12e-15 | 72.8 |
MS.gene89961.t1 | MTR_2g008310 | 25.490 | 408 | 226 | 18 | 9 | 403 | 2 | 344 | 1.07e-14 | 75.9 |
MS.gene89961.t1 | MTR_3g023630 | 23.632 | 402 | 235 | 13 | 9 | 402 | 8 | 345 | 2.04e-14 | 75.1 |
MS.gene89961.t1 | MTR_2g007500 | 24.479 | 384 | 215 | 13 | 9 | 379 | 14 | 335 | 3.97e-14 | 73.6 |
MS.gene89961.t1 | MTR_1g013560 | 25.768 | 423 | 259 | 13 | 5 | 402 | 15 | 407 | 8.68e-14 | 73.6 |
MS.gene89961.t1 | MTR_3g107160 | 22.883 | 437 | 258 | 14 | 4 | 425 | 5 | 377 | 1.15e-13 | 72.8 |
MS.gene89961.t1 | MTR_1g107385 | 25.169 | 445 | 244 | 17 | 9 | 424 | 32 | 416 | 2.36e-13 | 72.0 |
MS.gene89961.t1 | MTR_3g109982 | 25.166 | 453 | 267 | 13 | 4 | 402 | 8 | 442 | 3.18e-13 | 72.4 |
MS.gene89961.t1 | MTR_5g058100 | 25.814 | 430 | 238 | 16 | 9 | 424 | 9 | 371 | 6.06e-13 | 70.5 |
MS.gene89961.t1 | MTR_0492s0020 | 34.320 | 169 | 96 | 7 | 9 | 173 | 86 | 243 | 7.94e-13 | 70.5 |
MS.gene89961.t1 | MTR_4g039440 | 24.694 | 409 | 227 | 17 | 9 | 402 | 34 | 376 | 8.46e-13 | 70.1 |
MS.gene89961.t1 | MTR_0543s0010 | 34.320 | 169 | 96 | 7 | 9 | 173 | 86 | 243 | 9.63e-13 | 70.1 |
MS.gene89961.t1 | MTR_7g034115 | 36.250 | 160 | 92 | 4 | 9 | 163 | 11 | 165 | 1.05e-12 | 69.7 |
MS.gene89961.t1 | MTR_1g085120 | 26.056 | 426 | 229 | 19 | 9 | 415 | 92 | 450 | 1.12e-12 | 70.1 |
MS.gene89961.t1 | MTR_7g032380 | 31.148 | 183 | 109 | 6 | 9 | 185 | 11 | 182 | 1.14e-12 | 69.3 |
MS.gene89961.t1 | MTR_3g082890 | 24.944 | 449 | 234 | 16 | 6 | 402 | 14 | 411 | 1.35e-12 | 69.7 |
MS.gene89961.t1 | MTR_1g085120 | 26.056 | 426 | 229 | 19 | 9 | 415 | 167 | 525 | 1.36e-12 | 70.1 |
MS.gene89961.t1 | MTR_2g091145 | 26.824 | 425 | 251 | 18 | 5 | 402 | 17 | 408 | 2.01e-12 | 69.3 |
MS.gene89961.t1 | MTR_1g014450 | 24.605 | 443 | 237 | 18 | 4 | 402 | 11 | 400 | 2.40e-12 | 68.9 |
MS.gene89961.t1 | MTR_6g011460 | 24.460 | 417 | 235 | 15 | 9 | 412 | 46 | 395 | 2.56e-12 | 68.9 |
MS.gene89961.t1 | MTR_4g080773 | 27.273 | 451 | 269 | 20 | 6 | 414 | 13 | 446 | 2.99e-12 | 68.9 |
MS.gene89961.t1 | MTR_4g080773 | 27.273 | 451 | 269 | 20 | 6 | 414 | 13 | 446 | 3.46e-12 | 68.6 |
MS.gene89961.t1 | MTR_5g039950 | 27.805 | 410 | 235 | 16 | 9 | 402 | 23 | 387 | 3.68e-12 | 68.2 |
MS.gene89961.t1 | MTR_1g108820 | 25.062 | 403 | 235 | 17 | 9 | 402 | 8 | 352 | 4.55e-12 | 67.8 |
MS.gene89961.t1 | MTR_4g047950 | 28.417 | 278 | 168 | 11 | 5 | 253 | 9 | 284 | 5.99e-12 | 67.4 |
MS.gene89961.t1 | MTR_7g033915 | 36.607 | 112 | 65 | 3 | 9 | 116 | 11 | 120 | 1.17e-11 | 66.2 |
MS.gene89961.t1 | MTR_8g085430 | 30.601 | 183 | 102 | 6 | 9 | 175 | 11 | 184 | 1.24e-11 | 66.2 |
MS.gene89961.t1 | MTR_2g082800 | 33.193 | 238 | 123 | 11 | 4 | 232 | 22 | 232 | 1.73e-11 | 66.2 |
MS.gene89961.t1 | MTR_1g115245 | 30.400 | 250 | 131 | 7 | 4 | 243 | 21 | 237 | 3.21e-11 | 64.7 |
MS.gene89961.t1 | MTR_8g058965 | 25.874 | 429 | 275 | 16 | 9 | 407 | 13 | 428 | 3.53e-11 | 65.5 |
MS.gene89961.t1 | MTR_1g013560 | 33.333 | 183 | 107 | 5 | 5 | 174 | 15 | 195 | 3.82e-11 | 64.7 |
MS.gene89961.t1 | MTR_7g110910 | 81.579 | 38 | 7 | 0 | 1 | 38 | 158 | 195 | 4.72e-11 | 62.4 |
MS.gene89961.t1 | MTR_1g013840 | 24.700 | 417 | 262 | 13 | 9 | 402 | 56 | 443 | 4.73e-11 | 65.1 |
MS.gene89961.t1 | MTR_8g062080 | 32.044 | 181 | 108 | 7 | 1 | 168 | 15 | 193 | 5.41e-11 | 64.7 |
MS.gene89961.t1 | MTR_2g036470 | 24.344 | 419 | 223 | 15 | 9 | 402 | 14 | 363 | 6.21e-11 | 64.3 |
MS.gene89961.t1 | MTR_6g022360 | 31.250 | 176 | 102 | 5 | 3 | 174 | 37 | 197 | 6.25e-11 | 64.3 |
MS.gene89961.t1 | MTR_8g014160 | 34.463 | 177 | 99 | 5 | 4 | 163 | 36 | 212 | 9.49e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89961.t1 | AT4G00315 | 29.224 | 438 | 259 | 19 | 9 | 413 | 2 | 421 | 3.37e-29 | 119 |
MS.gene89961.t1 | AT1G55660 | 27.955 | 440 | 262 | 18 | 9 | 413 | 53 | 472 | 1.34e-28 | 118 |
MS.gene89961.t1 | AT4G10400 | 27.804 | 428 | 270 | 13 | 9 | 424 | 2 | 402 | 1.31e-26 | 111 |
MS.gene89961.t1 | AT4G10400 | 27.804 | 428 | 270 | 13 | 9 | 424 | 2 | 402 | 1.31e-26 | 111 |
MS.gene89961.t1 | AT4G10400 | 27.804 | 428 | 270 | 13 | 9 | 424 | 2 | 402 | 1.31e-26 | 111 |
MS.gene89961.t1 | AT4G14103 | 29.919 | 371 | 214 | 13 | 9 | 347 | 8 | 364 | 3.59e-25 | 107 |
MS.gene89961.t1 | AT4G14103 | 29.919 | 371 | 214 | 13 | 9 | 347 | 8 | 364 | 3.59e-25 | 107 |
MS.gene89961.t1 | AT4G14103 | 30.790 | 367 | 207 | 14 | 9 | 343 | 8 | 359 | 1.24e-24 | 106 |
MS.gene89961.t1 | AT5G56380 | 25.799 | 438 | 278 | 13 | 9 | 418 | 2 | 420 | 1.42e-24 | 105 |
MS.gene89961.t1 | AT5G56380 | 25.799 | 438 | 278 | 13 | 9 | 418 | 2 | 420 | 1.42e-24 | 105 |
MS.gene89961.t1 | AT2G26860 | 29.340 | 409 | 260 | 14 | 9 | 402 | 2 | 396 | 2.78e-24 | 104 |
MS.gene89961.t1 | AT2G26860 | 29.340 | 409 | 260 | 14 | 9 | 402 | 2 | 396 | 2.78e-24 | 104 |
MS.gene89961.t1 | AT3G59190 | 30.000 | 370 | 202 | 13 | 9 | 335 | 12 | 367 | 3.55e-24 | 103 |
MS.gene89961.t1 | AT4G26340 | 27.654 | 405 | 261 | 13 | 9 | 401 | 2 | 386 | 7.36e-24 | 103 |
MS.gene89961.t1 | AT3G59190 | 30.000 | 370 | 202 | 13 | 9 | 335 | 12 | 367 | 8.43e-24 | 104 |
MS.gene89961.t1 | AT5G62970 | 28.246 | 439 | 246 | 18 | 9 | 402 | 2 | 416 | 3.09e-23 | 102 |
MS.gene89961.t1 | AT3G50710 | 27.529 | 425 | 253 | 17 | 9 | 407 | 2 | 397 | 7.54e-23 | 100 |
MS.gene89961.t1 | AT1G51370 | 29.371 | 429 | 247 | 16 | 7 | 411 | 17 | 413 | 1.08e-22 | 100 |
MS.gene89961.t1 | AT5G38590 | 26.977 | 430 | 262 | 15 | 9 | 416 | 2 | 401 | 1.21e-22 | 100 |
MS.gene89961.t1 | AT4G26350 | 25.000 | 432 | 258 | 14 | 9 | 407 | 2 | 400 | 2.07e-22 | 99.4 |
MS.gene89961.t1 | AT3G59230 | 27.517 | 447 | 265 | 15 | 9 | 407 | 12 | 447 | 9.25e-22 | 98.2 |
MS.gene89961.t1 | AT5G41830 | 25.983 | 458 | 249 | 13 | 3 | 407 | 7 | 427 | 2.27e-21 | 97.1 |
MS.gene89961.t1 | AT3G03040 | 27.424 | 361 | 221 | 6 | 9 | 335 | 2 | 355 | 5.10e-21 | 95.9 |
MS.gene89961.t1 | AT1G55660 | 28.228 | 333 | 188 | 13 | 9 | 312 | 53 | 363 | 5.84e-21 | 94.4 |
MS.gene89961.t1 | AT3G56780 | 26.572 | 493 | 263 | 19 | 11 | 430 | 9 | 475 | 6.58e-21 | 95.5 |
MS.gene89961.t1 | AT3G59210 | 29.383 | 405 | 226 | 16 | 5 | 368 | 3 | 388 | 9.69e-21 | 95.1 |
MS.gene89961.t1 | AT3G59210 | 29.383 | 405 | 226 | 16 | 5 | 368 | 3 | 388 | 9.69e-21 | 95.1 |
MS.gene89961.t1 | AT3G59210 | 29.383 | 405 | 226 | 16 | 5 | 368 | 3 | 388 | 9.69e-21 | 95.1 |
MS.gene89961.t1 | AT3G59210 | 29.383 | 405 | 226 | 16 | 5 | 368 | 3 | 388 | 9.69e-21 | 95.1 |
MS.gene89961.t1 | AT3G59210 | 29.383 | 405 | 226 | 16 | 5 | 368 | 3 | 388 | 9.69e-21 | 95.1 |
MS.gene89961.t1 | AT4G14096 | 26.591 | 440 | 266 | 19 | 9 | 412 | 8 | 426 | 1.24e-20 | 94.4 |
MS.gene89961.t1 | AT4G14096 | 26.591 | 440 | 266 | 19 | 9 | 412 | 8 | 426 | 1.24e-20 | 94.4 |
MS.gene89961.t1 | AT3G03030 | 27.568 | 370 | 216 | 10 | 9 | 336 | 2 | 361 | 2.93e-20 | 93.6 |
MS.gene89961.t1 | AT5G56370 | 25.995 | 427 | 283 | 12 | 9 | 426 | 2 | 404 | 2.10e-19 | 90.5 |
MS.gene89961.t1 | AT5G56370 | 25.995 | 427 | 283 | 12 | 9 | 426 | 2 | 404 | 2.10e-19 | 90.5 |
MS.gene89961.t1 | AT5G38396 | 28.375 | 363 | 219 | 11 | 9 | 337 | 2 | 357 | 2.81e-19 | 90.5 |
MS.gene89961.t1 | AT4G22280 | 30.137 | 438 | 252 | 20 | 9 | 424 | 2 | 407 | 1.90e-18 | 87.4 |
MS.gene89961.t1 | AT1G51370 | 29.847 | 392 | 220 | 15 | 7 | 375 | 17 | 376 | 1.96e-18 | 87.4 |
MS.gene89961.t1 | AT5G53840 | 28.806 | 427 | 237 | 20 | 7 | 402 | 16 | 406 | 2.12e-18 | 87.8 |
MS.gene89961.t1 | AT3G59200 | 25.948 | 501 | 283 | 21 | 8 | 450 | 6 | 476 | 4.98e-18 | 87.0 |
MS.gene89961.t1 | AT3G59160 | 26.055 | 403 | 228 | 13 | 9 | 351 | 13 | 405 | 5.59e-18 | 86.7 |
MS.gene89961.t1 | AT5G56440 | 24.408 | 422 | 265 | 11 | 9 | 402 | 2 | 397 | 5.98e-18 | 86.3 |
MS.gene89961.t1 | AT4G22280 | 32.184 | 348 | 198 | 17 | 9 | 337 | 2 | 330 | 7.23e-18 | 84.7 |
MS.gene89961.t1 | AT4G13965 | 26.279 | 430 | 237 | 18 | 9 | 404 | 10 | 393 | 7.76e-18 | 85.9 |
MS.gene89961.t1 | AT1G32375 | 25.858 | 437 | 262 | 17 | 9 | 418 | 2 | 403 | 9.70e-18 | 85.5 |
MS.gene89961.t1 | AT1G32375 | 25.858 | 437 | 262 | 17 | 9 | 418 | 2 | 403 | 9.70e-18 | 85.5 |
MS.gene89961.t1 | AT3G03030 | 28.349 | 321 | 182 | 9 | 9 | 287 | 2 | 316 | 1.42e-17 | 84.0 |
MS.gene89961.t1 | AT5G60610 | 27.014 | 422 | 243 | 16 | 9 | 402 | 2 | 386 | 2.01e-17 | 84.3 |
MS.gene89961.t1 | AT5G60610 | 27.014 | 422 | 243 | 16 | 9 | 402 | 2 | 386 | 2.01e-17 | 84.3 |
MS.gene89961.t1 | AT4G00320 | 25.964 | 389 | 241 | 11 | 3 | 352 | 7 | 387 | 2.16e-17 | 84.7 |
MS.gene89961.t1 | AT5G56420 | 27.166 | 427 | 237 | 19 | 8 | 402 | 5 | 389 | 4.71e-17 | 83.6 |
MS.gene89961.t1 | AT5G56420 | 27.166 | 427 | 237 | 19 | 8 | 402 | 5 | 389 | 4.71e-17 | 83.6 |
MS.gene89961.t1 | AT5G56420 | 27.166 | 427 | 237 | 19 | 8 | 402 | 5 | 389 | 4.71e-17 | 83.6 |
MS.gene89961.t1 | AT5G41840 | 27.441 | 379 | 217 | 11 | 9 | 337 | 14 | 384 | 1.25e-16 | 82.8 |
MS.gene89961.t1 | AT4G13960 | 28.022 | 364 | 212 | 12 | 9 | 337 | 2 | 350 | 1.73e-16 | 82.0 |
MS.gene89961.t1 | AT4G13960 | 28.022 | 364 | 212 | 12 | 9 | 337 | 2 | 350 | 1.73e-16 | 82.0 |
MS.gene89961.t1 | AT1G51370 | 36.905 | 168 | 89 | 6 | 7 | 169 | 17 | 172 | 2.02e-16 | 80.9 |
MS.gene89961.t1 | AT3G56780 | 26.682 | 431 | 225 | 17 | 11 | 376 | 9 | 413 | 2.68e-16 | 81.3 |
MS.gene89961.t1 | AT3G58860 | 27.606 | 355 | 219 | 12 | 6 | 337 | 4 | 343 | 2.98e-16 | 81.3 |
MS.gene89961.t1 | AT5G22670 | 27.674 | 430 | 241 | 18 | 8 | 399 | 10 | 407 | 4.87e-16 | 80.5 |
MS.gene89961.t1 | AT3G59200 | 27.926 | 376 | 207 | 16 | 8 | 337 | 6 | 363 | 5.61e-16 | 79.7 |
MS.gene89961.t1 | AT3G26930 | 27.119 | 413 | 252 | 17 | 8 | 400 | 20 | 403 | 8.84e-16 | 79.7 |
MS.gene89961.t1 | AT4G00160 | 26.588 | 425 | 269 | 15 | 9 | 414 | 16 | 416 | 8.88e-16 | 79.7 |
MS.gene89961.t1 | AT1G52650 | 25.517 | 435 | 263 | 15 | 9 | 402 | 2 | 416 | 9.98e-16 | 79.7 |
MS.gene89961.t1 | AT1G58310 | 25.000 | 484 | 284 | 16 | 9 | 424 | 8 | 480 | 1.22e-15 | 79.3 |
MS.gene89961.t1 | AT3G59240 | 27.095 | 358 | 219 | 11 | 9 | 337 | 8 | 352 | 1.57e-15 | 79.0 |
MS.gene89961.t1 | AT2G42730 | 27.804 | 428 | 261 | 18 | 9 | 402 | 5 | 418 | 1.66e-15 | 79.0 |
MS.gene89961.t1 | AT1G55030 | 24.816 | 407 | 261 | 16 | 9 | 399 | 19 | 396 | 1.97e-15 | 78.6 |
MS.gene89961.t1 | AT1G55030 | 24.816 | 407 | 261 | 16 | 9 | 399 | 9 | 386 | 2.02e-15 | 78.6 |
MS.gene89961.t1 | AT1G66300 | 25.974 | 462 | 275 | 19 | 3 | 424 | 15 | 449 | 2.13e-15 | 78.6 |
MS.gene89961.t1 | AT1G69630 | 27.642 | 369 | 216 | 13 | 2 | 337 | 11 | 361 | 2.35e-15 | 78.2 |
MS.gene89961.t1 | AT3G52680 | 26.328 | 433 | 258 | 16 | 9 | 414 | 21 | 419 | 3.20e-15 | 77.8 |
MS.gene89961.t1 | AT5G56560 | 26.351 | 444 | 280 | 17 | 6 | 429 | 2 | 418 | 3.54e-15 | 77.8 |
MS.gene89961.t1 | AT2G04230 | 24.516 | 465 | 287 | 16 | 8 | 439 | 12 | 445 | 5.67e-15 | 77.0 |
MS.gene89961.t1 | AT1G06630 | 30.278 | 360 | 200 | 15 | 9 | 337 | 12 | 351 | 8.06e-15 | 75.9 |
MS.gene89961.t1 | AT1G06630 | 30.278 | 360 | 200 | 15 | 9 | 337 | 12 | 351 | 8.06e-15 | 75.9 |
MS.gene89961.t1 | AT5G56820 | 25.234 | 428 | 267 | 16 | 9 | 418 | 15 | 407 | 8.92e-15 | 76.6 |
MS.gene89961.t1 | AT3G62440 | 28.571 | 392 | 214 | 18 | 9 | 352 | 2 | 375 | 9.26e-15 | 76.6 |
MS.gene89961.t1 | AT3G58880 | 27.072 | 362 | 218 | 12 | 9 | 337 | 3 | 351 | 9.84e-15 | 76.6 |
MS.gene89961.t1 | AT5G18770 | 26.407 | 462 | 282 | 18 | 9 | 433 | 24 | 464 | 1.07e-14 | 76.6 |
MS.gene89961.t1 | AT4G15060 | 26.389 | 360 | 216 | 13 | 6 | 337 | 23 | 361 | 1.11e-14 | 76.3 |
MS.gene89961.t1 | AT3G58920 | 26.087 | 391 | 218 | 12 | 9 | 346 | 2 | 374 | 1.11e-14 | 76.3 |
MS.gene89961.t1 | AT3G58900 | 27.033 | 418 | 236 | 12 | 9 | 376 | 2 | 400 | 1.32e-14 | 76.3 |
MS.gene89961.t1 | AT1G06630 | 30.278 | 360 | 200 | 15 | 9 | 337 | 12 | 351 | 1.40e-14 | 75.9 |
MS.gene89961.t1 | AT1G06630 | 30.278 | 360 | 200 | 15 | 9 | 337 | 12 | 351 | 1.40e-14 | 75.9 |
MS.gene89961.t1 | AT1G06630 | 30.278 | 360 | 200 | 15 | 9 | 337 | 12 | 351 | 1.40e-14 | 75.9 |
MS.gene89961.t1 | AT1G06630 | 30.278 | 360 | 200 | 15 | 9 | 337 | 12 | 351 | 1.40e-14 | 75.9 |
MS.gene89961.t1 | AT1G78760 | 26.606 | 436 | 258 | 21 | 7 | 410 | 14 | 419 | 1.67e-14 | 75.9 |
MS.gene89961.t1 | AT1G06630 | 30.278 | 360 | 200 | 15 | 9 | 337 | 12 | 351 | 1.70e-14 | 75.9 |
MS.gene89961.t1 | AT1G06630 | 30.278 | 360 | 200 | 15 | 9 | 337 | 21 | 360 | 1.77e-14 | 75.5 |
MS.gene89961.t1 | AT3G44060 | 28.763 | 372 | 208 | 18 | 14 | 351 | 4 | 352 | 2.68e-14 | 75.1 |
MS.gene89961.t1 | AT5G38392 | 34.500 | 200 | 112 | 5 | 9 | 190 | 2 | 200 | 2.94e-14 | 72.0 |
MS.gene89961.t1 | AT3G58960 | 27.005 | 374 | 204 | 15 | 9 | 337 | 2 | 351 | 3.08e-14 | 75.1 |
MS.gene89961.t1 | AT5G38590 | 35.000 | 160 | 94 | 4 | 9 | 163 | 2 | 156 | 3.32e-14 | 73.6 |
MS.gene89961.t1 | AT3G26930 | 26.234 | 385 | 235 | 17 | 36 | 400 | 3 | 358 | 3.34e-14 | 74.7 |
MS.gene89961.t1 | AT2G42720 | 30.000 | 370 | 191 | 18 | 9 | 336 | 2 | 345 | 5.35e-14 | 74.3 |
MS.gene89961.t1 | AT1G78750 | 26.230 | 366 | 218 | 14 | 9 | 337 | 18 | 368 | 5.38e-14 | 74.3 |
MS.gene89961.t1 | AT1G78750 | 26.230 | 366 | 218 | 14 | 9 | 337 | 18 | 368 | 5.38e-14 | 74.3 |
MS.gene89961.t1 | AT4G09920 | 35.000 | 160 | 98 | 4 | 9 | 164 | 2 | 159 | 5.94e-14 | 73.2 |
MS.gene89961.t1 | AT4G09920 | 35.000 | 160 | 98 | 4 | 9 | 164 | 2 | 159 | 5.94e-14 | 73.2 |
MS.gene89961.t1 | AT5G18780 | 26.577 | 444 | 258 | 19 | 9 | 416 | 11 | 422 | 6.95e-14 | 73.9 |
MS.gene89961.t1 | AT5G18780 | 26.577 | 444 | 258 | 19 | 9 | 416 | 11 | 422 | 6.95e-14 | 73.9 |
MS.gene89961.t1 | AT2G29930 | 28.022 | 364 | 199 | 16 | 9 | 337 | 12 | 347 | 7.18e-14 | 73.9 |
MS.gene89961.t1 | AT2G29930 | 28.022 | 364 | 199 | 16 | 9 | 337 | 12 | 347 | 7.18e-14 | 73.9 |
MS.gene89961.t1 | AT4G09920 | 35.000 | 160 | 98 | 4 | 9 | 164 | 2 | 159 | 7.49e-14 | 72.4 |
MS.gene89961.t1 | AT4G09920 | 35.000 | 160 | 98 | 4 | 9 | 164 | 2 | 159 | 7.49e-14 | 72.4 |
MS.gene89961.t1 | AT4G09920 | 35.000 | 160 | 98 | 4 | 9 | 164 | 2 | 159 | 7.49e-14 | 72.4 |
MS.gene89961.t1 | AT5G44490 | 25.734 | 443 | 270 | 17 | 4 | 411 | 12 | 430 | 1.07e-13 | 73.2 |
MS.gene89961.t1 | AT2G26030 | 26.932 | 427 | 258 | 20 | 9 | 400 | 4 | 411 | 1.11e-13 | 73.2 |
MS.gene89961.t1 | AT5G44490 | 25.734 | 443 | 270 | 17 | 4 | 411 | 12 | 430 | 1.22e-13 | 73.2 |
MS.gene89961.t1 | AT5G38590 | 29.444 | 180 | 106 | 3 | 9 | 186 | 2 | 162 | 1.43e-13 | 71.2 |
MS.gene89961.t1 | AT5G53635 | 25.977 | 435 | 260 | 20 | 11 | 409 | 2 | 410 | 1.73e-13 | 72.4 |
MS.gene89961.t1 | AT3G58930 | 25.455 | 385 | 213 | 12 | 9 | 337 | 2 | 368 | 1.85e-13 | 72.8 |
MS.gene89961.t1 | AT3G58930 | 25.455 | 385 | 213 | 12 | 9 | 337 | 2 | 368 | 1.85e-13 | 72.8 |
MS.gene89961.t1 | AT3G58930 | 25.455 | 385 | 213 | 12 | 9 | 337 | 2 | 368 | 1.85e-13 | 72.8 |
MS.gene89961.t1 | AT5G38390 | 25.858 | 437 | 255 | 19 | 9 | 403 | 2 | 411 | 2.10e-13 | 72.4 |
MS.gene89961.t1 | AT2G26030 | 27.123 | 424 | 256 | 20 | 9 | 400 | 4 | 406 | 2.15e-13 | 72.4 |
MS.gene89961.t1 | AT2G26030 | 27.123 | 424 | 256 | 20 | 9 | 400 | 4 | 406 | 2.15e-13 | 72.4 |
MS.gene89961.t1 | AT4G15060 | 26.821 | 302 | 183 | 10 | 9 | 285 | 172 | 460 | 2.75e-13 | 72.4 |
MS.gene89961.t1 | AT1G16930 | 27.273 | 440 | 241 | 21 | 9 | 414 | 15 | 409 | 3.41e-13 | 71.6 |
MS.gene89961.t1 | AT1G16930 | 27.273 | 440 | 241 | 21 | 9 | 414 | 15 | 409 | 3.41e-13 | 71.6 |
MS.gene89961.t1 | AT1G16930 | 27.273 | 440 | 241 | 21 | 9 | 414 | 15 | 409 | 3.41e-13 | 71.6 |
MS.gene89961.t1 | AT5G38386 | 23.529 | 340 | 206 | 9 | 9 | 337 | 2 | 298 | 3.66e-13 | 71.2 |
MS.gene89961.t1 | AT5G38386 | 23.529 | 340 | 206 | 9 | 9 | 337 | 2 | 298 | 3.66e-13 | 71.2 |
MS.gene89961.t1 | AT4G13985 | 27.747 | 364 | 223 | 13 | 4 | 337 | 14 | 367 | 3.75e-13 | 71.6 |
MS.gene89961.t1 | AT5G44950 | 26.603 | 421 | 263 | 18 | 9 | 402 | 4 | 405 | 4.35e-13 | 71.2 |
MS.gene89961.t1 | AT1G66290 | 26.316 | 437 | 245 | 18 | 4 | 402 | 24 | 421 | 4.85e-13 | 71.2 |
MS.gene89961.t1 | AT3G59150 | 27.832 | 309 | 176 | 12 | 9 | 281 | 13 | 310 | 5.02e-13 | 71.2 |
MS.gene89961.t1 | AT3G14710 | 26.862 | 443 | 275 | 15 | 3 | 424 | 20 | 434 | 6.08e-13 | 70.9 |
MS.gene89961.t1 | AT3G56780 | 33.136 | 169 | 100 | 5 | 11 | 175 | 9 | 168 | 8.68e-13 | 70.1 |
MS.gene89961.t1 | AT3G42770 | 30.820 | 305 | 161 | 12 | 14 | 285 | 4 | 291 | 9.74e-13 | 70.5 |
MS.gene89961.t1 | AT3G58940 | 25.562 | 356 | 218 | 10 | 9 | 337 | 2 | 337 | 1.31e-12 | 70.1 |
MS.gene89961.t1 | AT3G58940 | 25.562 | 356 | 218 | 10 | 9 | 337 | 2 | 337 | 1.31e-12 | 70.1 |
MS.gene89961.t1 | AT3G49150 | 24.892 | 462 | 304 | 14 | 7 | 433 | 14 | 467 | 1.42e-12 | 69.7 |
MS.gene89961.t1 | AT5G56690 | 27.778 | 414 | 259 | 17 | 11 | 402 | 4 | 399 | 1.85e-12 | 69.3 |
MS.gene89961.t1 | AT5G22610 | 27.083 | 432 | 261 | 20 | 8 | 416 | 17 | 417 | 2.65e-12 | 68.9 |
MS.gene89961.t1 | AT5G38570 | 28.205 | 312 | 157 | 12 | 9 | 281 | 2 | 285 | 2.86e-12 | 68.6 |
MS.gene89961.t1 | AT3G59000 | 35.714 | 154 | 83 | 7 | 9 | 149 | 2 | 152 | 3.04e-12 | 68.2 |
MS.gene89961.t1 | AT3G59000 | 34.659 | 176 | 98 | 6 | 9 | 169 | 2 | 175 | 3.91e-12 | 68.6 |
MS.gene89961.t1 | AT5G22730 | 25.641 | 429 | 260 | 16 | 8 | 400 | 27 | 432 | 4.11e-12 | 68.6 |
MS.gene89961.t1 | AT5G22730 | 25.641 | 429 | 260 | 16 | 8 | 400 | 27 | 432 | 4.11e-12 | 68.6 |
MS.gene89961.t1 | AT5G22700 | 26.790 | 433 | 245 | 19 | 7 | 399 | 41 | 441 | 5.10e-12 | 68.2 |
MS.gene89961.t1 | AT5G22700 | 26.790 | 433 | 245 | 19 | 7 | 399 | 4 | 404 | 6.30e-12 | 67.8 |
MS.gene89961.t1 | AT5G22700 | 26.790 | 433 | 245 | 19 | 7 | 399 | 4 | 404 | 6.30e-12 | 67.8 |
MS.gene89961.t1 | AT5G22700 | 26.790 | 433 | 245 | 19 | 7 | 399 | 4 | 404 | 6.30e-12 | 67.8 |
MS.gene89961.t1 | AT5G22700 | 26.790 | 433 | 245 | 19 | 7 | 399 | 4 | 404 | 6.30e-12 | 67.8 |
MS.gene89961.t1 | AT5G56370 | 27.219 | 338 | 213 | 12 | 9 | 337 | 2 | 315 | 7.11e-12 | 66.6 |
MS.gene89961.t1 | AT3G58980 | 25.729 | 377 | 226 | 13 | 9 | 347 | 2 | 362 | 7.18e-12 | 67.8 |
MS.gene89961.t1 | AT5G25860 | 27.202 | 386 | 223 | 18 | 9 | 350 | 12 | 383 | 7.64e-12 | 67.4 |
MS.gene89961.t1 | AT5G56700 | 28.037 | 321 | 206 | 13 | 93 | 404 | 48 | 352 | 1.12e-11 | 66.6 |
MS.gene89961.t1 | AT1G05080 | 26.128 | 421 | 261 | 15 | 8 | 402 | 12 | 408 | 1.56e-11 | 66.6 |
MS.gene89961.t1 | AT3G58900 | 28.313 | 332 | 174 | 10 | 9 | 291 | 2 | 318 | 1.87e-11 | 65.5 |
MS.gene89961.t1 | AT3G58900 | 28.313 | 332 | 174 | 10 | 9 | 291 | 2 | 318 | 1.87e-11 | 65.5 |
MS.gene89961.t1 | AT3G58900 | 28.049 | 328 | 174 | 9 | 9 | 289 | 2 | 314 | 1.91e-11 | 65.5 |
MS.gene89961.t1 | AT5G22610 | 26.009 | 446 | 278 | 18 | 8 | 416 | 17 | 447 | 1.97e-11 | 66.2 |
MS.gene89961.t1 | AT5G18780 | 32.749 | 171 | 89 | 7 | 9 | 167 | 11 | 167 | 3.06e-11 | 65.1 |
MS.gene89961.t1 | AT5G18780 | 32.749 | 171 | 89 | 7 | 9 | 167 | 11 | 167 | 3.06e-11 | 65.1 |
MS.gene89961.t1 | AT3G51530 | 24.594 | 431 | 263 | 18 | 9 | 412 | 30 | 425 | 4.24e-11 | 65.1 |
MS.gene89961.t1 | AT1G48400 | 25.316 | 395 | 207 | 13 | 9 | 337 | 10 | 382 | 4.84e-11 | 65.1 |
MS.gene89961.t1 | AT5G25850 | 34.783 | 161 | 89 | 6 | 9 | 163 | 20 | 170 | 7.99e-11 | 64.3 |
MS.gene89961.t1 | AT5G35995 | 26.050 | 357 | 217 | 15 | 9 | 337 | 5 | 342 | 8.85e-11 | 64.3 |
MS.gene89961.t1 | AT5G35995 | 26.050 | 357 | 217 | 15 | 9 | 337 | 5 | 342 | 8.85e-11 | 64.3 |
MS.gene89961.t1 | AT5G53640 | 31.288 | 163 | 104 | 5 | 7 | 167 | 20 | 176 | 8.89e-11 | 62.0 |
Find 84 sgRNAs with CRISPR-Local
Find 108 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCATTGCATTTGAATTTAA+AGG | 0.125528 | 4.2:+47720919 | MS.gene89961:CDS |
ACTTAAGGATCTTGCAATTA+TGG | 0.162434 | 4.2:+47720483 | MS.gene89961:CDS |
ATGTACAAATTTGATTTCTT+TGG | 0.230513 | 4.2:-47719579 | None:intergenic |
AGAAATCCTCCTTACTAGTA+TGG | 0.246783 | 4.2:+47721076 | MS.gene89961:CDS |
ACATGTTCTATAACACTCTT+TGG | 0.268393 | 4.2:-47719471 | None:intergenic |
ATTGCAAGATCCTTAAGTTT+TGG | 0.271802 | 4.2:-47720478 | None:intergenic |
TTCTCTTGTTGATGTTTCAT+TGG | 0.279764 | 4.2:+47720078 | MS.gene89961:CDS |
TATAACACTCTTTGGTTGAT+AGG | 0.294346 | 4.2:-47719463 | None:intergenic |
TAATTCAATTGAAGATCATT+TGG | 0.321337 | 4.2:+47721353 | MS.gene89961:CDS |
AAAGTCAAGGTTGGGAATCT+TGG | 0.353597 | 4.2:-47719525 | None:intergenic |
TCACAAGTTATTATATTTAA+CGG | 0.359548 | 4.2:+47720399 | MS.gene89961:CDS |
TATCCTGTAACTAGATTAAG+AGG | 0.361958 | 4.2:-47721409 | None:intergenic |
AGTTTCCAACCTCATTTCTT+CGG | 0.365062 | 4.2:-47720849 | None:intergenic |
GATTATTCCTTACTTTATAT+AGG | 0.375374 | 4.2:+47719996 | MS.gene89961:CDS |
GTTTCCAACCTCATTTCTTC+GGG | 0.376468 | 4.2:-47720848 | None:intergenic |
ACAAAATGCTCCAAAACTTA+AGG | 0.405643 | 4.2:+47720468 | MS.gene89961:CDS |
ACTCGTGGTCTTAAAATTGC+GGG | 0.408358 | 4.2:+47719787 | MS.gene89961:CDS |
ATGAGGTTGGAAACTCTAGA+TGG | 0.416736 | 4.2:+47720857 | MS.gene89961:CDS |
ACAGATCCAAGTCAAGTTCC+TGG | 0.422138 | 4.2:-47719715 | None:intergenic |
CAAGGTCCAGGAACTTGACT+TGG | 0.457085 | 4.2:+47719709 | MS.gene89961:CDS |
AAGTGAAAAGAGGTGTTGAT+AGG | 0.462824 | 4.2:-47719965 | None:intergenic |
TGTAAGTCACTCAAATAAGT+TGG | 0.467816 | 4.2:+47720984 | MS.gene89961:CDS |
TAAAGAGTATTCTATGTTTG+AGG | 0.473169 | 4.2:+47719913 | MS.gene89961:CDS |
GGTAATTGAAAGTCAAGGTT+GGG | 0.476845 | 4.2:-47719533 | None:intergenic |
AAGTAGGCCTATATAAAGTA+AGG | 0.476895 | 4.2:-47720003 | None:intergenic |
GTATACAAATTGTTAAAATC+CGG | 0.478212 | 4.2:-47720169 | None:intergenic |
AAATTCAAATGCAATGAGAC+TGG | 0.478300 | 4.2:-47720914 | None:intergenic |
GGTGGTGTTCAATGAAATCT+TGG | 0.480760 | 4.2:-47721382 | None:intergenic |
TTGATTTCTTTGGACAACTC+AGG | 0.483223 | 4.2:-47719569 | None:intergenic |
GGCATTAGATCTCAAGGTCC+AGG | 0.496808 | 4.2:+47719697 | MS.gene89961:CDS |
TCTTTGCATTTGTAAGCGTC+CGG | 0.498367 | 4.2:+47720150 | MS.gene89961:CDS |
AATTTGTATACACTCTTGAA+AGG | 0.500652 | 4.2:+47720181 | MS.gene89961:CDS |
GAAATCCTCCTTACTAGTAT+GGG | 0.501373 | 4.2:+47721077 | MS.gene89961:CDS |
GTAACTAGATTAAGAGGGTC+GGG | 0.502456 | 4.2:-47721403 | None:intergenic |
TGATTTCTTTGGACAACTCA+GGG | 0.514750 | 4.2:-47719568 | None:intergenic |
AACTCAGGGTCTGAAATCTC+TGG | 0.516045 | 4.2:-47719554 | None:intergenic |
TAGAATACGCCACAGTTTCA+CGG | 0.516230 | 4.2:-47719877 | None:intergenic |
AAACTCTACCCATACTAGTA+AGG | 0.521476 | 4.2:-47721085 | None:intergenic |
TCTCTTCAATAAGTGAAAAG+AGG | 0.524063 | 4.2:-47719975 | None:intergenic |
TGTACACATGTGGGTTTCAA+AGG | 0.528762 | 4.2:+47719676 | MS.gene89961:CDS |
AGAGAAACAACTTCAAGTGC+AGG | 0.530138 | 4.2:-47720061 | None:intergenic |
TACTTTATATAGGCCTACTT+CGG | 0.536022 | 4.2:+47720006 | MS.gene89961:CDS |
AATCAGTTCCCGAAGAAATG+AGG | 0.538157 | 4.2:+47720840 | MS.gene89961:CDS |
CACTCGTGGTCTTAAAATTG+CGG | 0.539007 | 4.2:+47719786 | MS.gene89961:CDS |
CATGTGTTCTATCCACAAGA+TGG | 0.542093 | 4.2:+47719489 | MS.gene89961:CDS |
TTCAAAGGCATTAGATCTCA+AGG | 0.542872 | 4.2:+47719691 | MS.gene89961:CDS |
GGTGGAGCCGTCAGTAACTC+CGG | 0.547394 | 4.2:+47720879 | MS.gene89961:CDS |
TGGTAATTGAAAGTCAAGGT+TGG | 0.551378 | 4.2:-47719534 | None:intergenic |
CTAAGTCTTGATAGCAACAA+AGG | 0.551526 | 4.2:+47719638 | MS.gene89961:CDS |
CAACTCTTAATAACCGAAGT+AGG | 0.552066 | 4.2:-47720019 | None:intergenic |
GAGAAACAACTTCAAGTGCA+GGG | 0.552832 | 4.2:-47720060 | None:intergenic |
TGTTATGCAGTTTCTCAGCA+TGG | 0.553413 | 4.2:+47720342 | MS.gene89961:intron |
AATGTCAGAACATTGGCTCT+CGG | 0.568403 | 4.2:+47720211 | MS.gene89961:CDS |
GCAGGGGCATTAATTTGTAG+TGG | 0.570310 | 4.2:-47720043 | None:intergenic |
GCAGATCGACTCCCATCTTG+TGG | 0.572297 | 4.2:-47719501 | None:intergenic |
ATGTGTTCTATCCACAAGAT+GGG | 0.579779 | 4.2:+47719490 | MS.gene89961:CDS |
AAATATCTGAGAATTGCAGT+TGG | 0.586019 | 4.2:+47720425 | MS.gene89961:CDS |
ACTTTCTAATGTCAGAACAT+TGG | 0.587029 | 4.2:+47720204 | MS.gene89961:CDS |
TGAAAAGAAGAATTGAGTGT+TGG | 0.588267 | 4.2:-47719821 | None:intergenic |
AGACTGGTTGTAAGACATGC+CGG | 0.589947 | 4.2:-47720898 | None:intergenic |
AGTTCCCGAAGAAATGAGGT+TGG | 0.592639 | 4.2:+47720844 | MS.gene89961:CDS |
TCACTCAAATAAGTTGGAGA+AGG | 0.595587 | 4.2:+47720990 | MS.gene89961:CDS |
TGTAACTAGATTAAGAGGGT+CGG | 0.598827 | 4.2:-47721404 | None:intergenic |
TGAGGTTGGAAACTCTAGAT+GGG | 0.616468 | 4.2:+47720858 | MS.gene89961:CDS |
CTCTACCCATACTAGTAAGG+AGG | 0.626461 | 4.2:-47721082 | None:intergenic |
TTCCACGTGTGAGTCACTCG+TGG | 0.631019 | 4.2:+47719772 | MS.gene89961:CDS |
TCTTCATCTCCGTGAAACTG+TGG | 0.632446 | 4.2:+47719868 | MS.gene89961:CDS |
GCGTATTCTATGTTTGATGA+CGG | 0.640607 | 4.2:+47719890 | MS.gene89961:CDS |
GGTGTTGATAGGTAATGCAA+AGG | 0.643336 | 4.2:-47719954 | None:intergenic |
GCCACATGATGTACACATGT+GGG | 0.650684 | 4.2:+47719667 | MS.gene89961:CDS |
AGACATGCCGGAGTTACTGA+CGG | 0.652161 | 4.2:-47720886 | None:intergenic |
AGAAACAACTTCAAGTGCAG+GGG | 0.652750 | 4.2:-47720059 | None:intergenic |
GGTTGGAAACTCTAGATGGG+TGG | 0.653900 | 4.2:+47720861 | MS.gene89961:CDS |
ACATGTGTACATCATGTGGC+TGG | 0.656362 | 4.2:-47719664 | None:intergenic |
AGATGAAGAATCTTTAGTGA+CGG | 0.657169 | 4.2:-47719854 | None:intergenic |
ACCCACATGTGTACATCATG+TGG | 0.672342 | 4.2:-47719668 | None:intergenic |
CTCGTGGTCTTAAAATTGCG+GGG | 0.673910 | 4.2:+47719788 | MS.gene89961:CDS |
GACCACGAGTGACTCACACG+TGG | 0.682798 | 4.2:-47719774 | None:intergenic |
AGCCACATGATGTACACATG+TGG | 0.685172 | 4.2:+47719666 | MS.gene89961:CDS |
TCTCTGGTAATTGAAAGTCA+AGG | 0.696256 | 4.2:-47719538 | None:intergenic |
TCACACGTGGAAAGCCTAAG+CGG | 0.701582 | 4.2:-47719761 | None:intergenic |
TATGCAGTTTCTCAGCATGG+AGG | 0.703511 | 4.2:+47720345 | MS.gene89961:intron |
ACTAGATTAAGAGGGTCGGG+TGG | 0.718609 | 4.2:-47721400 | None:intergenic |
ATCCTGTAACTAGATTAAGA+GGG | 0.720026 | 4.2:-47721408 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GAATTAATTAAATTGTTTAT+CGG | - | chr4.2:47720640-47720659 | None:intergenic | 10.0% |
!! | TTTAAAAGATGAAATATAAT+AGG | + | chr4.2:47720550-47720569 | MS.gene89961:intron | 10.0% |
!!! | AAAATTCTAATAATATTTTC+TGG | + | chr4.2:47720795-47720814 | MS.gene89961:intron | 10.0% |
!! | TCACAAGTTATTATATTTAA+CGG | + | chr4.2:47720399-47720418 | MS.gene89961:CDS | 15.0% |
!!! | AATTATTCAATATTTGTTAC+AGG | + | chr4.2:47721326-47721345 | MS.gene89961:intron | 15.0% |
!!! | ACTTAGTTTTCTTATATTTT+CGG | - | chr4.2:47719624-47719643 | None:intergenic | 15.0% |
!! | AAGTAAAATAGTTTGAAAGA+AGG | - | chr4.2:47720714-47720733 | None:intergenic | 20.0% |
!! | GATTATTCCTTACTTTATAT+AGG | + | chr4.2:47719996-47720015 | MS.gene89961:CDS | 20.0% |
!! | GTATACAAATTGTTAAAATC+CGG | - | chr4.2:47720172-47720191 | None:intergenic | 20.0% |
!! | TAATTCAATTGAAGATCATT+TGG | + | chr4.2:47721353-47721372 | MS.gene89961:CDS | 20.0% |
!! | TATATATACAATTACATTCG+TGG | + | chr4.2:47721228-47721247 | MS.gene89961:intron | 20.0% |
!!! | ATGTACAAATTTGATTTCTT+TGG | - | chr4.2:47719582-47719601 | None:intergenic | 20.0% |
!!! | TATTATTAGAATTTTCCAAC+TGG | - | chr4.2:47720790-47720809 | None:intergenic | 20.0% |
!!! | TTTGTAAAGTCATATTTTCT+AGG | - | chr4.2:47720106-47720125 | None:intergenic | 20.0% |
! | AATGAGAATAGAATTGCATA+TGG | - | chr4.2:47720313-47720332 | None:intergenic | 25.0% |
! | AATTTGTATACACTCTTGAA+AGG | + | chr4.2:47720181-47720200 | MS.gene89961:CDS | 25.0% |
! | AGTTTGAAAGAAGGTTAAAT+TGG | - | chr4.2:47720705-47720724 | None:intergenic | 25.0% |
! | ATGAGAATAGAATTGCATAT+GGG | - | chr4.2:47720312-47720331 | None:intergenic | 25.0% |
! | CTATTTACTATATATCCAGT+TGG | + | chr4.2:47720772-47720791 | MS.gene89961:intron | 25.0% |
! | CTCATTGCATTTGAATTTAA+AGG | + | chr4.2:47720919-47720938 | MS.gene89961:CDS | 25.0% |
! | GTTTGAAAGAAGGTTAAATT+GGG | - | chr4.2:47720704-47720723 | None:intergenic | 25.0% |
! | TCAAAACATAAAAACTGAGT+TGG | + | chr4.2:47720945-47720964 | MS.gene89961:CDS | 25.0% |
!! | AAAAAATATTATTGCCGCTT+AGG | + | chr4.2:47719747-47719766 | MS.gene89961:CDS | 25.0% |
!! | GAAAGTATATAAACTCTGTA+TGG | - | chr4.2:47721128-47721147 | None:intergenic | 25.0% |
!!! | TAAAGAGTATTCTATGTTTG+AGG | + | chr4.2:47719913-47719932 | MS.gene89961:CDS | 25.0% |
AAATATCTGAGAATTGCAGT+TGG | + | chr4.2:47720425-47720444 | MS.gene89961:CDS | 30.0% | |
AAATTCAAATGCAATGAGAC+TGG | - | chr4.2:47720917-47720936 | None:intergenic | 30.0% | |
AAGTAGGCCTATATAAAGTA+AGG | - | chr4.2:47720006-47720025 | None:intergenic | 30.0% | |
ACAAAATGCTCCAAAACTTA+AGG | + | chr4.2:47720468-47720487 | MS.gene89961:CDS | 30.0% | |
ACATGTTCTATAACACTCTT+TGG | - | chr4.2:47719474-47719493 | None:intergenic | 30.0% | |
ACTTAAGGATCTTGCAATTA+TGG | + | chr4.2:47720483-47720502 | MS.gene89961:CDS | 30.0% | |
ACTTTCTAATGTCAGAACAT+TGG | + | chr4.2:47720204-47720223 | MS.gene89961:CDS | 30.0% | |
AGATGAAGAATCTTTAGTGA+CGG | - | chr4.2:47719857-47719876 | None:intergenic | 30.0% | |
AGTAGAAAAAAGTTTACGCA+TGG | + | chr4.2:47721047-47721066 | MS.gene89961:CDS | 30.0% | |
ATATAATAGGCTCAAAAGTC+TGG | + | chr4.2:47720563-47720582 | MS.gene89961:intron | 30.0% | |
GACATATAAAGTTGTGTTGA+TGG | - | chr4.2:47721199-47721218 | None:intergenic | 30.0% | |
GTAGAAAAAAGTTTACGCAT+GGG | + | chr4.2:47721048-47721067 | MS.gene89961:CDS | 30.0% | |
TACTTTATATAGGCCTACTT+CGG | + | chr4.2:47720006-47720025 | MS.gene89961:CDS | 30.0% | |
TAGAAAAAAGTTTACGCATG+GGG | + | chr4.2:47721049-47721068 | MS.gene89961:CDS | 30.0% | |
TATAACACTCTTTGGTTGAT+AGG | - | chr4.2:47719466-47719485 | None:intergenic | 30.0% | |
TCTCTTCAATAAGTGAAAAG+AGG | - | chr4.2:47719978-47719997 | None:intergenic | 30.0% | |
TGAAAAGAAGAATTGAGTGT+TGG | - | chr4.2:47719824-47719843 | None:intergenic | 30.0% | |
TGTAAGTCACTCAAATAAGT+TGG | + | chr4.2:47720984-47721003 | MS.gene89961:CDS | 30.0% | |
TTCTCTTGTTGATGTTTCAT+TGG | + | chr4.2:47720078-47720097 | MS.gene89961:CDS | 30.0% | |
! | AATATCTAGAACAATGAGAG+AGG | - | chr4.2:47721168-47721187 | None:intergenic | 30.0% |
! | ATTGCAAGATCCTTAAGTTT+TGG | - | chr4.2:47720481-47720500 | None:intergenic | 30.0% |
!! | TATAAAGTTGTGTTGATGGT+CGG | - | chr4.2:47721195-47721214 | None:intergenic | 30.0% |
!!! | GCGGCAATAATATTTTTTCA+TGG | - | chr4.2:47719745-47719764 | None:intergenic | 30.0% |
AAACTCTACCCATACTAGTA+AGG | - | chr4.2:47721088-47721107 | None:intergenic | 35.0% | |
AAGACTTGGCGAAATATACA+TGG | + | chr4.2:47720599-47720618 | MS.gene89961:intron | 35.0% | |
AGAAATCCTCCTTACTAGTA+TGG | + | chr4.2:47721076-47721095 | MS.gene89961:CDS | 35.0% | |
AGTTTCCAACCTCATTTCTT+CGG | - | chr4.2:47720852-47720871 | None:intergenic | 35.0% | |
ATGTGTTCTATCCACAAGAT+GGG | + | chr4.2:47719490-47719509 | MS.gene89961:CDS | 35.0% | |
CAACTCTTAATAACCGAAGT+AGG | - | chr4.2:47720022-47720041 | None:intergenic | 35.0% | |
GAAATCCTCCTTACTAGTAT+GGG | + | chr4.2:47721077-47721096 | MS.gene89961:CDS | 35.0% | |
GCGTATTCTATGTTTGATGA+CGG | + | chr4.2:47719890-47719909 | MS.gene89961:CDS | 35.0% | |
GGTAATTGAAAGTCAAGGTT+GGG | - | chr4.2:47719536-47719555 | None:intergenic | 35.0% | |
TCTCTGGTAATTGAAAGTCA+AGG | - | chr4.2:47719541-47719560 | None:intergenic | 35.0% | |
TGAAAGAAGGTTAAATTGGG+AGG | - | chr4.2:47720701-47720720 | None:intergenic | 35.0% | |
TGATTTCTTTGGACAACTCA+GGG | - | chr4.2:47719571-47719590 | None:intergenic | 35.0% | |
TGCATATGGGAGACTAAATA+TGG | - | chr4.2:47720299-47720318 | None:intergenic | 35.0% | |
TGGTAATTGAAAGTCAAGGT+TGG | - | chr4.2:47719537-47719556 | None:intergenic | 35.0% | |
TTGATTTCTTTGGACAACTC+AGG | - | chr4.2:47719572-47719591 | None:intergenic | 35.0% | |
! | CTAAGTCTTGATAGCAACAA+AGG | + | chr4.2:47719638-47719657 | MS.gene89961:CDS | 35.0% |
! | TCACTCAAATAAGTTGGAGA+AGG | + | chr4.2:47720990-47721009 | MS.gene89961:CDS | 35.0% |
!! | AAGTGAAAAGAGGTGTTGAT+AGG | - | chr4.2:47719968-47719987 | None:intergenic | 35.0% |
!! | TTCAAAGGCATTAGATCTCA+AGG | + | chr4.2:47719691-47719710 | MS.gene89961:CDS | 35.0% |
AAAGTCAAGGTTGGGAATCT+TGG | - | chr4.2:47719528-47719547 | None:intergenic | 40.0% | |
AATCAGTTCCCGAAGAAATG+AGG | + | chr4.2:47720840-47720859 | MS.gene89961:CDS | 40.0% | |
AGAAACAACTTCAAGTGCAG+GGG | - | chr4.2:47720062-47720081 | None:intergenic | 40.0% | |
AGAGAAACAACTTCAAGTGC+AGG | - | chr4.2:47720064-47720083 | None:intergenic | 40.0% | |
ATGAGGTTGGAAACTCTAGA+TGG | + | chr4.2:47720857-47720876 | MS.gene89961:CDS | 40.0% | |
CATGTGTTCTATCCACAAGA+TGG | + | chr4.2:47719489-47719508 | MS.gene89961:CDS | 40.0% | |
GAGAAACAACTTCAAGTGCA+GGG | - | chr4.2:47720063-47720082 | None:intergenic | 40.0% | |
GGTGGTGTTCAATGAAATCT+TGG | - | chr4.2:47721385-47721404 | None:intergenic | 40.0% | |
GTTTCCAACCTCATTTCTTC+GGG | - | chr4.2:47720851-47720870 | None:intergenic | 40.0% | |
TAGAATACGCCACAGTTTCA+CGG | - | chr4.2:47719880-47719899 | None:intergenic | 40.0% | |
TCTTTGCATTTGTAAGCGTC+CGG | + | chr4.2:47720150-47720169 | MS.gene89961:CDS | 40.0% | |
TGAGGTTGGAAACTCTAGAT+GGG | + | chr4.2:47720858-47720877 | MS.gene89961:CDS | 40.0% | |
TGTACACATGTGGGTTTCAA+AGG | + | chr4.2:47719676-47719695 | MS.gene89961:CDS | 40.0% | |
TGTTATGCAGTTTCTCAGCA+TGG | + | chr4.2:47720342-47720361 | MS.gene89961:intron | 40.0% | |
! | ACTCGTGGTCTTAAAATTGC+GGG | + | chr4.2:47719787-47719806 | MS.gene89961:CDS | 40.0% |
! | CACTCGTGGTCTTAAAATTG+CGG | + | chr4.2:47719786-47719805 | MS.gene89961:CDS | 40.0% |
!! | AATGTCAGAACATTGGCTCT+CGG | + | chr4.2:47720211-47720230 | MS.gene89961:CDS | 40.0% |
!! | GGTGTTGATAGGTAATGCAA+AGG | - | chr4.2:47719957-47719976 | None:intergenic | 40.0% |
ACAGATCCAAGTCAAGTTCC+TGG | - | chr4.2:47719718-47719737 | None:intergenic | 45.0% | |
ACATGTGTACATCATGTGGC+TGG | - | chr4.2:47719667-47719686 | None:intergenic | 45.0% | |
ACCCACATGTGTACATCATG+TGG | - | chr4.2:47719671-47719690 | None:intergenic | 45.0% | |
AGCCACATGATGTACACATG+TGG | + | chr4.2:47719666-47719685 | MS.gene89961:CDS | 45.0% | |
AGTTCCCGAAGAAATGAGGT+TGG | + | chr4.2:47720844-47720863 | MS.gene89961:CDS | 45.0% | |
CTCTACCCATACTAGTAAGG+AGG | - | chr4.2:47721085-47721104 | None:intergenic | 45.0% | |
GCACTAGAAGAGCAAAGACT+TGG | + | chr4.2:47720585-47720604 | MS.gene89961:intron | 45.0% | |
GCCACATGATGTACACATGT+GGG | + | chr4.2:47719667-47719686 | MS.gene89961:CDS | 45.0% | |
TATGCAGTTTCTCAGCATGG+AGG | + | chr4.2:47720345-47720364 | MS.gene89961:intron | 45.0% | |
TCTTCATCTCCGTGAAACTG+TGG | + | chr4.2:47719868-47719887 | MS.gene89961:CDS | 45.0% | |
! | AACTCAGGGTCTGAAATCTC+TGG | - | chr4.2:47719557-47719576 | None:intergenic | 45.0% |
! | AGACTGGTTGTAAGACATGC+CGG | - | chr4.2:47720901-47720920 | None:intergenic | 45.0% |
! | CTCGTGGTCTTAAAATTGCG+GGG | + | chr4.2:47719788-47719807 | MS.gene89961:CDS | 45.0% |
!! | GCAGGGGCATTAATTTGTAG+TGG | - | chr4.2:47720046-47720065 | None:intergenic | 45.0% |
AGACATGCCGGAGTTACTGA+CGG | - | chr4.2:47720889-47720908 | None:intergenic | 50.0% | |
CAAGGTCCAGGAACTTGACT+TGG | + | chr4.2:47719709-47719728 | MS.gene89961:CDS | 50.0% | |
GGCATTAGATCTCAAGGTCC+AGG | + | chr4.2:47719697-47719716 | MS.gene89961:CDS | 50.0% | |
GGTTGGAAACTCTAGATGGG+TGG | + | chr4.2:47720861-47720880 | MS.gene89961:CDS | 50.0% | |
TCACACGTGGAAAGCCTAAG+CGG | - | chr4.2:47719764-47719783 | None:intergenic | 50.0% | |
TTCCACGTGTGAGTCACTCG+TGG | + | chr4.2:47719772-47719791 | MS.gene89961:CDS | 55.0% | |
! | GCAGATCGACTCCCATCTTG+TGG | - | chr4.2:47719504-47719523 | None:intergenic | 55.0% |
GACCACGAGTGACTCACACG+TGG | - | chr4.2:47719777-47719796 | None:intergenic | 60.0% | |
GGTGGAGCCGTCAGTAACTC+CGG | + | chr4.2:47720879-47720898 | MS.gene89961:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 47719389 | 47721416 | 47719389 | ID=MS.gene89961 |
chr4.2 | mRNA | 47719389 | 47721416 | 47719389 | ID=MS.gene89961.t1;Parent=MS.gene89961 |
chr4.2 | exon | 47719389 | 47720249 | 47719389 | ID=MS.gene89961.t1.exon1;Parent=MS.gene89961.t1 |
chr4.2 | CDS | 47719389 | 47720249 | 47719389 | ID=cds.MS.gene89961.t1;Parent=MS.gene89961.t1 |
chr4.2 | exon | 47720352 | 47720504 | 47720352 | ID=MS.gene89961.t1.exon2;Parent=MS.gene89961.t1 |
chr4.2 | CDS | 47720352 | 47720504 | 47720352 | ID=cds.MS.gene89961.t1;Parent=MS.gene89961.t1 |
chr4.2 | exon | 47720829 | 47721098 | 47720829 | ID=MS.gene89961.t1.exon3;Parent=MS.gene89961.t1 |
chr4.2 | CDS | 47720829 | 47721098 | 47720829 | ID=cds.MS.gene89961.t1;Parent=MS.gene89961.t1 |
chr4.2 | exon | 47721348 | 47721416 | 47721348 | ID=MS.gene89961.t1.exon4;Parent=MS.gene89961.t1 |
chr4.2 | CDS | 47721348 | 47721416 | 47721348 | ID=cds.MS.gene89961.t1;Parent=MS.gene89961.t1 |
Gene Sequence |
Protein sequence |