Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03750.t1 | XP_013455879.2 | 90.1 | 474 | 45 | 1 | 1 | 474 | 1 | 472 | 3.60E-222 | 780.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03750.t1 | Q3EAE5 | 25.9 | 475 | 252 | 17 | 9 | 447 | 2 | 412 | 8.1e-21 | 103.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03750.t1 | A0A072UVN8 | 90.0 | 469 | 45 | 1 | 1 | 469 | 1 | 467 | 2.1e-219 | 771.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03750.t1 | MTR_4g056040 | 90.192 | 469 | 44 | 1 | 1 | 469 | 1 | 467 | 0.0 | 850 |
MS.gene03750.t1 | MTR_4g055990 | 78.512 | 484 | 94 | 2 | 1 | 474 | 1 | 484 | 0.0 | 744 |
MS.gene03750.t1 | MTR_4g055580 | 79.749 | 479 | 91 | 2 | 1 | 474 | 92 | 569 | 0.0 | 743 |
MS.gene03750.t1 | MTR_4g055990 | 78.288 | 479 | 94 | 2 | 1 | 469 | 1 | 479 | 0.0 | 733 |
MS.gene03750.t1 | MTR_4g056020 | 76.371 | 474 | 80 | 1 | 1 | 474 | 1 | 442 | 0.0 | 714 |
MS.gene03750.t1 | MTR_4g056030 | 76.160 | 474 | 81 | 1 | 1 | 474 | 1 | 442 | 0.0 | 710 |
MS.gene03750.t1 | MTR_4g056070 | 81.465 | 437 | 73 | 2 | 1 | 429 | 1 | 437 | 0.0 | 704 |
MS.gene03750.t1 | MTR_1g038710 | 65.417 | 480 | 126 | 4 | 1 | 474 | 11 | 456 | 0.0 | 568 |
MS.gene03750.t1 | MTR_1g090883 | 57.033 | 391 | 120 | 6 | 2 | 384 | 12 | 362 | 1.48e-128 | 378 |
MS.gene03750.t1 | MTR_7g110920 | 56.425 | 358 | 99 | 5 | 131 | 469 | 1 | 320 | 3.27e-121 | 357 |
MS.gene03750.t1 | MTR_4g056020 | 83.562 | 146 | 24 | 0 | 329 | 474 | 1 | 146 | 3.97e-80 | 246 |
MS.gene03750.t1 | MTR_4g093690 | 47.742 | 310 | 109 | 9 | 1 | 300 | 10 | 276 | 1.60e-69 | 223 |
MS.gene03750.t1 | MTR_1g090900 | 59.048 | 210 | 51 | 3 | 1 | 207 | 1 | 178 | 1.82e-66 | 212 |
MS.gene03750.t1 | MTR_4g056010 | 92.000 | 100 | 8 | 0 | 100 | 199 | 1 | 100 | 2.24e-58 | 187 |
MS.gene03750.t1 | MTR_8g014260 | 29.247 | 465 | 247 | 15 | 6 | 445 | 13 | 420 | 5.50e-30 | 122 |
MS.gene03750.t1 | MTR_1g090890 | 62.637 | 91 | 28 | 2 | 382 | 469 | 29 | 116 | 2.37e-29 | 111 |
MS.gene03750.t1 | MTR_5g084070 | 28.601 | 486 | 263 | 15 | 5 | 471 | 9 | 429 | 2.61e-29 | 119 |
MS.gene03750.t1 | MTR_1g041245 | 26.984 | 441 | 219 | 14 | 9 | 443 | 11 | 354 | 8.92e-29 | 117 |
MS.gene03750.t1 | MTR_4g032730 | 29.873 | 472 | 244 | 20 | 9 | 443 | 15 | 436 | 1.37e-27 | 115 |
MS.gene03750.t1 | MTR_5g080710 | 28.603 | 458 | 242 | 15 | 9 | 447 | 33 | 424 | 1.82e-25 | 108 |
MS.gene03750.t1 | MTR_3g108560 | 29.956 | 454 | 188 | 20 | 6 | 443 | 17 | 356 | 4.74e-25 | 107 |
MS.gene03750.t1 | MTR_8g445780 | 28.959 | 442 | 231 | 16 | 7 | 428 | 11 | 389 | 3.46e-24 | 104 |
MS.gene03750.t1 | MTR_8g468810 | 28.322 | 459 | 260 | 17 | 4 | 443 | 20 | 428 | 3.99e-24 | 105 |
MS.gene03750.t1 | MTR_8g062270 | 29.605 | 456 | 253 | 19 | 9 | 443 | 16 | 424 | 4.31e-24 | 105 |
MS.gene03750.t1 | MTR_2g083840 | 29.583 | 480 | 244 | 19 | 9 | 457 | 21 | 437 | 8.83e-24 | 103 |
MS.gene03750.t1 | MTR_8g058970 | 26.761 | 497 | 285 | 15 | 4 | 466 | 14 | 465 | 3.31e-22 | 99.4 |
MS.gene03750.t1 | MTR_8g467800 | 28.953 | 449 | 246 | 15 | 5 | 432 | 16 | 412 | 2.13e-21 | 97.1 |
MS.gene03750.t1 | MTR_8g468840 | 27.549 | 461 | 256 | 17 | 8 | 443 | 13 | 420 | 3.36e-21 | 96.3 |
MS.gene03750.t1 | MTR_0492s0020 | 26.773 | 437 | 213 | 17 | 9 | 443 | 86 | 417 | 1.47e-20 | 94.4 |
MS.gene03750.t1 | MTR_0543s0010 | 26.773 | 437 | 213 | 17 | 9 | 443 | 86 | 417 | 1.59e-20 | 94.4 |
MS.gene03750.t1 | MTR_8g014160 | 30.058 | 346 | 174 | 13 | 4 | 326 | 36 | 336 | 3.66e-20 | 92.8 |
MS.gene03750.t1 | MTR_3g108150 | 27.883 | 477 | 215 | 22 | 9 | 465 | 13 | 380 | 7.31e-19 | 88.6 |
MS.gene03750.t1 | MTR_7g033915 | 26.818 | 440 | 200 | 18 | 9 | 443 | 11 | 333 | 1.11e-18 | 87.8 |
MS.gene03750.t1 | MTR_2g007400 | 25.673 | 483 | 249 | 22 | 9 | 472 | 12 | 403 | 2.16e-18 | 87.4 |
MS.gene03750.t1 | MTR_8g468810 | 29.188 | 394 | 214 | 16 | 4 | 378 | 20 | 367 | 3.08e-18 | 86.7 |
MS.gene03750.t1 | MTR_8g468810 | 29.641 | 334 | 176 | 13 | 4 | 322 | 20 | 309 | 6.21e-18 | 85.1 |
MS.gene03750.t1 | MTR_8g468810 | 29.641 | 334 | 176 | 13 | 4 | 322 | 20 | 309 | 7.64e-18 | 84.7 |
MS.gene03750.t1 | MTR_8g468810 | 29.641 | 334 | 176 | 13 | 4 | 322 | 20 | 309 | 7.97e-18 | 85.1 |
MS.gene03750.t1 | MTR_7g098570 | 25.893 | 448 | 212 | 13 | 9 | 443 | 20 | 360 | 3.50e-17 | 84.3 |
MS.gene03750.t1 | MTR_7g115270 | 23.767 | 446 | 241 | 12 | 9 | 443 | 12 | 369 | 2.56e-16 | 81.3 |
MS.gene03750.t1 | MTR_8g058965 | 28.421 | 475 | 238 | 24 | 9 | 444 | 13 | 424 | 5.00e-16 | 80.5 |
MS.gene03750.t1 | MTR_5g008950 | 23.904 | 456 | 206 | 13 | 11 | 445 | 1 | 336 | 5.63e-16 | 79.7 |
MS.gene03750.t1 | MTR_4g098590 | 25.056 | 443 | 233 | 16 | 11 | 443 | 1 | 354 | 7.96e-16 | 79.3 |
MS.gene03750.t1 | MTR_8g467800 | 30.769 | 338 | 172 | 13 | 5 | 326 | 16 | 307 | 1.83e-15 | 77.8 |
MS.gene03750.t1 | MTR_3g048290 | 27.195 | 467 | 259 | 18 | 5 | 443 | 19 | 432 | 6.02e-15 | 77.4 |
MS.gene03750.t1 | MTR_1g013560 | 24.078 | 461 | 260 | 13 | 5 | 443 | 15 | 407 | 7.29e-15 | 77.0 |
MS.gene03750.t1 | MTR_7g034115 | 33.333 | 222 | 102 | 7 | 9 | 225 | 11 | 191 | 8.28e-15 | 76.3 |
MS.gene03750.t1 | MTR_3g108560 | 29.487 | 390 | 149 | 17 | 6 | 379 | 17 | 296 | 2.66e-14 | 73.9 |
MS.gene03750.t1 | MTR_4g050250 | 31.489 | 235 | 114 | 8 | 9 | 225 | 21 | 226 | 2.81e-14 | 75.1 |
MS.gene03750.t1 | MTR_7g034110 | 27.823 | 248 | 129 | 8 | 9 | 245 | 11 | 219 | 3.82e-14 | 73.9 |
MS.gene03750.t1 | MTR_3g023630 | 25.901 | 444 | 214 | 20 | 9 | 443 | 8 | 345 | 4.14e-14 | 73.9 |
MS.gene03750.t1 | MTR_4g080773 | 27.152 | 453 | 275 | 19 | 9 | 443 | 19 | 434 | 6.67e-14 | 74.3 |
MS.gene03750.t1 | MTR_4g080773 | 27.152 | 453 | 275 | 19 | 9 | 443 | 19 | 434 | 7.44e-14 | 73.9 |
MS.gene03750.t1 | MTR_4g024710 | 30.844 | 308 | 171 | 13 | 167 | 461 | 55 | 333 | 8.18e-14 | 73.2 |
MS.gene03750.t1 | MTR_1g013840 | 24.395 | 496 | 273 | 18 | 7 | 473 | 54 | 476 | 2.00e-13 | 72.8 |
MS.gene03750.t1 | MTR_5g092960 | 27.673 | 477 | 264 | 20 | 5 | 451 | 15 | 440 | 2.93e-13 | 72.0 |
MS.gene03750.t1 | MTR_1g013560 | 30.263 | 228 | 120 | 7 | 5 | 227 | 15 | 208 | 3.36e-13 | 71.2 |
MS.gene03750.t1 | MTR_7g032380 | 29.104 | 268 | 143 | 10 | 9 | 266 | 11 | 241 | 8.77e-13 | 70.1 |
MS.gene03750.t1 | MTR_5g045170 | 30.415 | 217 | 112 | 8 | 11 | 225 | 16 | 195 | 1.12e-12 | 70.1 |
MS.gene03750.t1 | MTR_7g056447 | 30.453 | 243 | 124 | 10 | 1 | 238 | 1 | 203 | 1.19e-12 | 68.9 |
MS.gene03750.t1 | MTR_2g047848 | 22.622 | 473 | 266 | 16 | 4 | 454 | 2 | 396 | 1.80e-12 | 69.3 |
MS.gene03750.t1 | MTR_8g062010 | 32.751 | 229 | 110 | 10 | 1 | 223 | 1 | 191 | 1.96e-12 | 69.3 |
MS.gene03750.t1 | MTR_5g045510 | 29.493 | 217 | 116 | 8 | 9 | 225 | 12 | 191 | 2.42e-12 | 68.6 |
MS.gene03750.t1 | MTR_7g055943 | 31.390 | 223 | 118 | 10 | 3 | 225 | 34 | 221 | 3.52e-12 | 68.6 |
MS.gene03750.t1 | MTR_7g033945 | 33.663 | 202 | 78 | 10 | 9 | 195 | 11 | 171 | 3.91e-12 | 65.1 |
MS.gene03750.t1 | MTR_7g034120 | 24.355 | 349 | 183 | 13 | 116 | 457 | 15 | 289 | 5.10e-12 | 67.0 |
MS.gene03750.t1 | MTR_6g044572 | 30.667 | 225 | 136 | 9 | 9 | 227 | 2 | 212 | 8.50e-12 | 67.0 |
MS.gene03750.t1 | MTR_2g008320 | 24.000 | 475 | 246 | 18 | 9 | 468 | 52 | 426 | 1.98e-11 | 66.2 |
MS.gene03750.t1 | MTR_6g044560 | 30.667 | 225 | 136 | 9 | 9 | 227 | 178 | 388 | 2.74e-11 | 66.2 |
MS.gene03750.t1 | MTR_7g098510 | 30.317 | 221 | 109 | 7 | 9 | 225 | 18 | 197 | 3.48e-11 | 65.1 |
MS.gene03750.t1 | MTR_7g110910 | 81.579 | 38 | 7 | 0 | 1 | 38 | 158 | 195 | 5.86e-11 | 62.4 |
MS.gene03750.t1 | MTR_6g022390 | 51.724 | 58 | 27 | 1 | 9 | 66 | 5 | 61 | 5.89e-11 | 61.2 |
MS.gene03750.t1 | MTR_4g050930 | 26.857 | 350 | 195 | 12 | 7 | 339 | 27 | 332 | 7.70e-11 | 64.7 |
MS.gene03750.t1 | MTR_4g050930 | 26.571 | 350 | 196 | 12 | 7 | 339 | 27 | 332 | 8.29e-11 | 63.9 |
MS.gene03750.t1 | MTR_4g024745 | 31.985 | 272 | 143 | 14 | 185 | 443 | 27 | 269 | 8.34e-11 | 63.2 |
MS.gene03750.t1 | MTR_5g040130 | 79.412 | 34 | 7 | 0 | 9 | 42 | 61 | 94 | 8.50e-11 | 58.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03750.t1 | AT4G00315 | 29.185 | 466 | 248 | 19 | 9 | 447 | 2 | 412 | 4.14e-28 | 116 |
MS.gene03750.t1 | AT1G51370 | 30.022 | 463 | 241 | 18 | 7 | 452 | 17 | 413 | 6.07e-28 | 115 |
MS.gene03750.t1 | AT4G14103 | 28.000 | 400 | 225 | 11 | 9 | 388 | 8 | 364 | 4.19e-27 | 112 |
MS.gene03750.t1 | AT4G14103 | 28.000 | 400 | 225 | 11 | 9 | 388 | 8 | 364 | 4.19e-27 | 112 |
MS.gene03750.t1 | AT4G14103 | 28.133 | 391 | 218 | 11 | 9 | 379 | 8 | 355 | 1.67e-26 | 112 |
MS.gene03750.t1 | AT1G55660 | 28.145 | 469 | 249 | 20 | 9 | 447 | 53 | 463 | 1.20e-25 | 110 |
MS.gene03750.t1 | AT4G14096 | 26.681 | 461 | 264 | 17 | 8 | 444 | 7 | 417 | 3.39e-25 | 108 |
MS.gene03750.t1 | AT4G14096 | 26.681 | 461 | 264 | 17 | 8 | 444 | 7 | 417 | 3.39e-25 | 108 |
MS.gene03750.t1 | AT4G10400 | 25.450 | 444 | 255 | 12 | 9 | 443 | 2 | 378 | 3.55e-25 | 107 |
MS.gene03750.t1 | AT4G10400 | 25.450 | 444 | 255 | 12 | 9 | 443 | 2 | 378 | 3.55e-25 | 107 |
MS.gene03750.t1 | AT4G10400 | 25.450 | 444 | 255 | 12 | 9 | 443 | 2 | 378 | 3.55e-25 | 107 |
MS.gene03750.t1 | AT5G62970 | 28.884 | 457 | 261 | 20 | 9 | 443 | 2 | 416 | 5.51e-25 | 107 |
MS.gene03750.t1 | AT4G00320 | 28.434 | 415 | 239 | 13 | 3 | 393 | 7 | 387 | 1.26e-24 | 107 |
MS.gene03750.t1 | AT4G26340 | 25.843 | 445 | 266 | 13 | 9 | 446 | 2 | 389 | 1.90e-24 | 105 |
MS.gene03750.t1 | AT5G41830 | 28.537 | 417 | 240 | 13 | 3 | 395 | 7 | 389 | 7.11e-24 | 104 |
MS.gene03750.t1 | AT5G53840 | 29.718 | 461 | 230 | 23 | 7 | 443 | 16 | 406 | 9.12e-24 | 103 |
MS.gene03750.t1 | AT3G59190 | 28.030 | 396 | 217 | 12 | 9 | 376 | 12 | 367 | 1.42e-23 | 102 |
MS.gene03750.t1 | AT1G58310 | 27.349 | 479 | 269 | 17 | 9 | 441 | 8 | 453 | 2.31e-23 | 103 |
MS.gene03750.t1 | AT3G59190 | 28.030 | 396 | 217 | 12 | 9 | 376 | 12 | 367 | 3.53e-23 | 102 |
MS.gene03750.t1 | AT3G58920 | 26.942 | 412 | 229 | 12 | 9 | 387 | 2 | 374 | 3.83e-23 | 102 |
MS.gene03750.t1 | AT1G51370 | 30.607 | 428 | 211 | 17 | 7 | 416 | 17 | 376 | 4.17e-23 | 101 |
MS.gene03750.t1 | AT3G52680 | 28.233 | 464 | 251 | 17 | 9 | 455 | 21 | 419 | 4.62e-23 | 102 |
MS.gene03750.t1 | AT3G59160 | 26.265 | 415 | 253 | 12 | 9 | 392 | 13 | 405 | 5.52e-23 | 101 |
MS.gene03750.t1 | AT5G38396 | 28.713 | 404 | 208 | 15 | 9 | 379 | 2 | 358 | 8.51e-23 | 101 |
MS.gene03750.t1 | AT2G26860 | 28.251 | 446 | 258 | 14 | 9 | 443 | 2 | 396 | 1.69e-22 | 99.8 |
MS.gene03750.t1 | AT2G26860 | 28.251 | 446 | 258 | 14 | 9 | 443 | 2 | 396 | 1.69e-22 | 99.8 |
MS.gene03750.t1 | AT3G50710 | 26.496 | 468 | 261 | 17 | 9 | 456 | 2 | 406 | 1.80e-22 | 99.8 |
MS.gene03750.t1 | AT3G59170 | 26.636 | 428 | 250 | 13 | 9 | 398 | 7 | 408 | 2.25e-22 | 100 |
MS.gene03750.t1 | AT3G59230 | 26.978 | 493 | 276 | 17 | 9 | 463 | 12 | 458 | 3.83e-22 | 99.4 |
MS.gene03750.t1 | AT4G13965 | 28.913 | 460 | 247 | 22 | 9 | 454 | 10 | 403 | 6.36e-22 | 98.2 |
MS.gene03750.t1 | AT3G59200 | 26.151 | 478 | 261 | 18 | 8 | 444 | 6 | 432 | 6.85e-22 | 99.0 |
MS.gene03750.t1 | AT5G56440 | 24.945 | 453 | 265 | 13 | 9 | 443 | 2 | 397 | 7.91e-22 | 98.2 |
MS.gene03750.t1 | AT5G56370 | 27.564 | 468 | 255 | 17 | 9 | 462 | 2 | 399 | 2.60e-21 | 96.3 |
MS.gene03750.t1 | AT5G56370 | 27.564 | 468 | 255 | 17 | 9 | 462 | 2 | 399 | 2.60e-21 | 96.3 |
MS.gene03750.t1 | AT3G03030 | 26.866 | 402 | 223 | 11 | 9 | 379 | 2 | 363 | 4.69e-21 | 96.3 |
MS.gene03750.t1 | AT5G56380 | 26.419 | 458 | 236 | 15 | 9 | 431 | 2 | 393 | 6.82e-21 | 95.5 |
MS.gene03750.t1 | AT5G56380 | 26.419 | 458 | 236 | 15 | 9 | 431 | 2 | 393 | 6.82e-21 | 95.5 |
MS.gene03750.t1 | AT1G51370 | 30.670 | 388 | 187 | 17 | 7 | 378 | 17 | 338 | 8.84e-21 | 94.0 |
MS.gene03750.t1 | AT5G56400 | 27.632 | 456 | 252 | 17 | 9 | 449 | 33 | 425 | 9.48e-21 | 95.1 |
MS.gene03750.t1 | AT5G41840 | 27.206 | 408 | 224 | 13 | 9 | 379 | 14 | 385 | 1.34e-20 | 95.1 |
MS.gene03750.t1 | AT5G38590 | 25.431 | 464 | 273 | 16 | 9 | 460 | 2 | 404 | 1.45e-20 | 94.0 |
MS.gene03750.t1 | AT1G06630 | 29.337 | 392 | 205 | 16 | 9 | 379 | 12 | 352 | 2.63e-20 | 92.4 |
MS.gene03750.t1 | AT1G06630 | 29.337 | 392 | 205 | 16 | 9 | 379 | 12 | 352 | 2.63e-20 | 92.4 |
MS.gene03750.t1 | AT1G06630 | 29.262 | 393 | 206 | 16 | 8 | 379 | 11 | 352 | 2.96e-20 | 93.2 |
MS.gene03750.t1 | AT1G06630 | 29.262 | 393 | 206 | 16 | 8 | 379 | 11 | 352 | 2.96e-20 | 93.2 |
MS.gene03750.t1 | AT1G06630 | 29.262 | 393 | 206 | 16 | 8 | 379 | 11 | 352 | 2.96e-20 | 93.2 |
MS.gene03750.t1 | AT1G06630 | 29.262 | 393 | 206 | 16 | 8 | 379 | 11 | 352 | 2.96e-20 | 93.2 |
MS.gene03750.t1 | AT3G03040 | 26.250 | 400 | 217 | 9 | 9 | 376 | 2 | 355 | 3.26e-20 | 93.6 |
MS.gene03750.t1 | AT1G06630 | 29.337 | 392 | 205 | 16 | 9 | 379 | 12 | 352 | 4.36e-20 | 93.2 |
MS.gene03750.t1 | AT1G06630 | 29.262 | 393 | 206 | 16 | 8 | 379 | 20 | 361 | 4.41e-20 | 92.8 |
MS.gene03750.t1 | AT2G04230 | 25.873 | 487 | 282 | 17 | 8 | 473 | 12 | 440 | 7.71e-20 | 92.4 |
MS.gene03750.t1 | AT4G26350 | 24.444 | 450 | 271 | 15 | 9 | 444 | 2 | 396 | 1.14e-19 | 91.7 |
MS.gene03750.t1 | AT1G13780 | 25.862 | 464 | 260 | 16 | 9 | 441 | 10 | 420 | 1.45e-19 | 91.7 |
MS.gene03750.t1 | AT1G55660 | 29.326 | 341 | 173 | 15 | 9 | 327 | 53 | 347 | 1.69e-19 | 90.5 |
MS.gene03750.t1 | AT4G22280 | 28.715 | 397 | 190 | 13 | 9 | 379 | 2 | 331 | 2.20e-19 | 89.4 |
MS.gene03750.t1 | AT4G22280 | 27.197 | 478 | 239 | 16 | 9 | 457 | 2 | 399 | 2.89e-19 | 90.1 |
MS.gene03750.t1 | AT3G59210 | 27.068 | 399 | 225 | 11 | 5 | 379 | 3 | 359 | 2.94e-19 | 90.9 |
MS.gene03750.t1 | AT3G59210 | 27.068 | 399 | 225 | 11 | 5 | 379 | 3 | 359 | 2.94e-19 | 90.9 |
MS.gene03750.t1 | AT3G59210 | 27.068 | 399 | 225 | 11 | 5 | 379 | 3 | 359 | 2.94e-19 | 90.9 |
MS.gene03750.t1 | AT3G59210 | 27.068 | 399 | 225 | 11 | 5 | 379 | 3 | 359 | 2.94e-19 | 90.9 |
MS.gene03750.t1 | AT3G59210 | 27.068 | 399 | 225 | 11 | 5 | 379 | 3 | 359 | 2.94e-19 | 90.9 |
MS.gene03750.t1 | AT3G62440 | 26.588 | 425 | 221 | 18 | 9 | 393 | 2 | 375 | 3.32e-19 | 90.5 |
MS.gene03750.t1 | AT5G56420 | 26.737 | 475 | 267 | 20 | 8 | 465 | 5 | 415 | 5.32e-19 | 89.4 |
MS.gene03750.t1 | AT5G56420 | 26.737 | 475 | 267 | 20 | 8 | 465 | 5 | 415 | 5.32e-19 | 89.4 |
MS.gene03750.t1 | AT5G56420 | 26.737 | 475 | 267 | 20 | 8 | 465 | 5 | 415 | 5.32e-19 | 89.4 |
MS.gene03750.t1 | AT3G58860 | 25.781 | 384 | 226 | 11 | 6 | 376 | 4 | 341 | 5.84e-19 | 89.7 |
MS.gene03750.t1 | AT3G03030 | 27.635 | 351 | 187 | 10 | 9 | 328 | 2 | 316 | 7.49e-19 | 87.8 |
MS.gene03750.t1 | AT3G26930 | 27.027 | 444 | 254 | 16 | 8 | 441 | 20 | 403 | 8.34e-19 | 89.0 |
MS.gene03750.t1 | AT5G38386 | 25.132 | 378 | 196 | 14 | 9 | 379 | 2 | 299 | 8.97e-19 | 88.6 |
MS.gene03750.t1 | AT5G38386 | 25.132 | 378 | 196 | 14 | 9 | 379 | 2 | 299 | 8.97e-19 | 88.6 |
MS.gene03750.t1 | AT3G59200 | 26.471 | 408 | 215 | 15 | 8 | 379 | 6 | 364 | 1.09e-18 | 87.8 |
MS.gene03750.t1 | AT5G60610 | 27.887 | 459 | 233 | 20 | 9 | 443 | 2 | 386 | 1.41e-18 | 87.8 |
MS.gene03750.t1 | AT5G60610 | 27.887 | 459 | 233 | 20 | 9 | 443 | 2 | 386 | 1.41e-18 | 87.8 |
MS.gene03750.t1 | AT4G13960 | 24.729 | 461 | 276 | 13 | 9 | 444 | 2 | 416 | 2.91e-18 | 87.4 |
MS.gene03750.t1 | AT4G13960 | 24.729 | 461 | 276 | 13 | 9 | 444 | 2 | 416 | 2.91e-18 | 87.4 |
MS.gene03750.t1 | AT5G53635 | 27.706 | 462 | 259 | 19 | 11 | 450 | 2 | 410 | 3.16e-18 | 87.0 |
MS.gene03750.t1 | AT1G69630 | 27.820 | 399 | 220 | 14 | 2 | 379 | 11 | 362 | 4.18e-18 | 87.0 |
MS.gene03750.t1 | AT5G22670 | 26.096 | 479 | 254 | 21 | 8 | 455 | 10 | 419 | 4.31e-18 | 87.0 |
MS.gene03750.t1 | AT1G66290 | 26.509 | 464 | 251 | 18 | 4 | 443 | 24 | 421 | 5.96e-18 | 86.7 |
MS.gene03750.t1 | AT1G66310 | 25.895 | 475 | 286 | 15 | 4 | 465 | 14 | 435 | 1.38e-17 | 85.5 |
MS.gene03750.t1 | AT5G18770 | 25.000 | 456 | 266 | 15 | 9 | 441 | 24 | 426 | 1.43e-17 | 85.5 |
MS.gene03750.t1 | AT1G32375 | 26.106 | 452 | 262 | 16 | 9 | 447 | 2 | 394 | 1.51e-17 | 85.1 |
MS.gene03750.t1 | AT1G32375 | 26.106 | 452 | 262 | 16 | 9 | 447 | 2 | 394 | 1.51e-17 | 85.1 |
MS.gene03750.t1 | AT1G78750 | 26.131 | 398 | 233 | 15 | 2 | 378 | 11 | 368 | 1.83e-17 | 85.1 |
MS.gene03750.t1 | AT1G78750 | 26.131 | 398 | 233 | 15 | 2 | 378 | 11 | 368 | 1.83e-17 | 85.1 |
MS.gene03750.t1 | AT3G62430 | 28.061 | 392 | 210 | 15 | 9 | 379 | 2 | 342 | 2.18e-17 | 84.7 |
MS.gene03750.t1 | AT1G16930 | 26.115 | 471 | 268 | 19 | 9 | 457 | 15 | 427 | 3.48e-17 | 84.3 |
MS.gene03750.t1 | AT1G16930 | 26.115 | 471 | 268 | 19 | 9 | 457 | 15 | 427 | 3.48e-17 | 84.3 |
MS.gene03750.t1 | AT1G16930 | 26.115 | 471 | 268 | 19 | 9 | 457 | 15 | 427 | 3.48e-17 | 84.3 |
MS.gene03750.t1 | AT1G66300 | 24.641 | 487 | 281 | 17 | 4 | 465 | 24 | 449 | 3.83e-17 | 84.0 |
MS.gene03750.t1 | AT3G58880 | 26.854 | 391 | 231 | 13 | 9 | 382 | 3 | 355 | 4.27e-17 | 84.0 |
MS.gene03750.t1 | AT3G26930 | 29.236 | 301 | 182 | 12 | 150 | 441 | 80 | 358 | 6.32e-17 | 83.2 |
MS.gene03750.t1 | AT5G44950 | 26.201 | 458 | 259 | 16 | 9 | 443 | 4 | 405 | 8.53e-17 | 82.8 |
MS.gene03750.t1 | AT3G42770 | 28.450 | 471 | 260 | 22 | 14 | 464 | 4 | 417 | 1.01e-16 | 83.2 |
MS.gene03750.t1 | AT4G13985 | 26.700 | 397 | 234 | 13 | 4 | 382 | 14 | 371 | 1.11e-16 | 82.8 |
MS.gene03750.t1 | AT1G05080 | 26.991 | 452 | 259 | 14 | 8 | 443 | 12 | 408 | 1.13e-16 | 82.4 |
MS.gene03750.t1 | AT3G58960 | 25.622 | 402 | 229 | 12 | 9 | 385 | 2 | 358 | 1.17e-16 | 82.8 |
MS.gene03750.t1 | AT1G78760 | 26.383 | 470 | 241 | 18 | 7 | 443 | 14 | 411 | 1.55e-16 | 82.0 |
MS.gene03750.t1 | AT3G49030 | 26.068 | 468 | 259 | 17 | 7 | 455 | 19 | 418 | 1.92e-16 | 82.0 |
MS.gene03750.t1 | AT3G56780 | 23.992 | 521 | 282 | 15 | 11 | 471 | 9 | 475 | 2.00e-16 | 82.0 |
MS.gene03750.t1 | AT4G09920 | 27.439 | 328 | 181 | 11 | 9 | 327 | 2 | 281 | 2.05e-16 | 80.5 |
MS.gene03750.t1 | AT4G09920 | 27.439 | 328 | 181 | 11 | 9 | 327 | 2 | 281 | 2.05e-16 | 80.5 |
MS.gene03750.t1 | AT5G22700 | 27.250 | 400 | 204 | 15 | 9 | 378 | 6 | 348 | 2.06e-16 | 81.6 |
MS.gene03750.t1 | AT5G22700 | 27.250 | 400 | 204 | 15 | 9 | 378 | 6 | 348 | 2.06e-16 | 81.6 |
MS.gene03750.t1 | AT5G22700 | 27.250 | 400 | 204 | 15 | 9 | 378 | 6 | 348 | 2.06e-16 | 81.6 |
MS.gene03750.t1 | AT5G22700 | 27.250 | 400 | 204 | 15 | 9 | 378 | 6 | 348 | 2.06e-16 | 81.6 |
MS.gene03750.t1 | AT1G13780 | 28.035 | 346 | 180 | 11 | 9 | 326 | 10 | 314 | 2.15e-16 | 80.5 |
MS.gene03750.t1 | AT3G59250 | 26.302 | 384 | 198 | 11 | 9 | 379 | 7 | 318 | 2.18e-16 | 81.6 |
MS.gene03750.t1 | AT5G38392 | 33.617 | 235 | 108 | 9 | 9 | 231 | 2 | 200 | 2.30e-16 | 78.6 |
MS.gene03750.t1 | AT5G22700 | 27.475 | 404 | 198 | 16 | 9 | 378 | 43 | 385 | 2.68e-16 | 81.6 |
MS.gene03750.t1 | AT3G59240 | 25.714 | 385 | 233 | 10 | 9 | 379 | 8 | 353 | 2.90e-16 | 81.6 |
MS.gene03750.t1 | AT1G06630 | 29.499 | 339 | 168 | 15 | 9 | 326 | 12 | 300 | 3.97e-16 | 79.3 |
MS.gene03750.t1 | AT3G52680 | 29.275 | 386 | 193 | 15 | 9 | 378 | 21 | 342 | 4.21e-16 | 80.1 |
MS.gene03750.t1 | AT5G56410 | 29.122 | 467 | 270 | 25 | 9 | 457 | 2 | 425 | 4.48e-16 | 80.9 |
MS.gene03750.t1 | AT4G09920 | 27.523 | 327 | 180 | 11 | 9 | 326 | 2 | 280 | 4.57e-16 | 79.0 |
MS.gene03750.t1 | AT4G09920 | 27.523 | 327 | 180 | 11 | 9 | 326 | 2 | 280 | 4.57e-16 | 79.0 |
MS.gene03750.t1 | AT4G09920 | 27.523 | 327 | 180 | 11 | 9 | 326 | 2 | 280 | 4.57e-16 | 79.0 |
MS.gene03750.t1 | AT2G42720 | 29.750 | 400 | 198 | 20 | 9 | 379 | 2 | 347 | 8.79e-16 | 79.7 |
MS.gene03750.t1 | AT2G42730 | 27.352 | 457 | 267 | 17 | 9 | 443 | 5 | 418 | 9.23e-16 | 79.7 |
MS.gene03750.t1 | AT2G26030 | 25.821 | 457 | 261 | 17 | 9 | 441 | 4 | 406 | 1.09e-15 | 79.7 |
MS.gene03750.t1 | AT2G26030 | 25.821 | 457 | 261 | 17 | 9 | 441 | 4 | 406 | 1.09e-15 | 79.7 |
MS.gene03750.t1 | AT4G10420 | 26.316 | 342 | 218 | 10 | 131 | 465 | 1 | 315 | 1.24e-15 | 78.2 |
MS.gene03750.t1 | AT2G26030 | 25.862 | 464 | 257 | 19 | 9 | 441 | 4 | 411 | 1.65e-15 | 79.0 |
MS.gene03750.t1 | AT3G58900 | 26.233 | 446 | 245 | 15 | 9 | 417 | 2 | 400 | 3.16e-15 | 78.2 |
MS.gene03750.t1 | AT5G56560 | 26.611 | 481 | 273 | 21 | 6 | 470 | 2 | 418 | 3.49e-15 | 77.8 |
MS.gene03750.t1 | AT3G44060 | 28.199 | 422 | 231 | 20 | 14 | 417 | 4 | 371 | 3.58e-15 | 77.8 |
MS.gene03750.t1 | AT5G56690 | 27.009 | 448 | 260 | 17 | 11 | 443 | 4 | 399 | 4.16e-15 | 77.4 |
MS.gene03750.t1 | AT5G56820 | 24.324 | 481 | 268 | 19 | 9 | 474 | 15 | 414 | 6.47e-15 | 77.0 |
MS.gene03750.t1 | AT3G54910 | 26.613 | 372 | 238 | 13 | 107 | 470 | 29 | 373 | 8.37e-15 | 76.3 |
MS.gene03750.t1 | AT3G54910 | 26.613 | 372 | 238 | 13 | 107 | 470 | 29 | 373 | 8.37e-15 | 76.3 |
MS.gene03750.t1 | AT3G54910 | 26.613 | 372 | 238 | 13 | 107 | 470 | 29 | 373 | 8.37e-15 | 76.3 |
MS.gene03750.t1 | AT3G59000 | 22.669 | 472 | 283 | 13 | 9 | 445 | 2 | 426 | 1.15e-14 | 76.6 |
MS.gene03750.t1 | AT1G55030 | 24.313 | 473 | 285 | 18 | 9 | 473 | 9 | 416 | 1.34e-14 | 75.9 |
MS.gene03750.t1 | AT5G22730 | 24.183 | 459 | 270 | 15 | 8 | 441 | 27 | 432 | 1.53e-14 | 76.3 |
MS.gene03750.t1 | AT5G22730 | 24.183 | 459 | 270 | 15 | 8 | 441 | 27 | 432 | 1.53e-14 | 76.3 |
MS.gene03750.t1 | AT1G52650 | 24.034 | 466 | 272 | 16 | 9 | 443 | 2 | 416 | 1.77e-14 | 75.9 |
MS.gene03750.t1 | AT1G55030 | 24.313 | 473 | 285 | 18 | 9 | 473 | 19 | 426 | 1.86e-14 | 75.5 |
MS.gene03750.t1 | AT5G22700 | 28.329 | 353 | 165 | 13 | 9 | 323 | 43 | 345 | 2.49e-14 | 75.1 |
MS.gene03750.t1 | AT5G38390 | 23.404 | 470 | 266 | 15 | 9 | 444 | 2 | 411 | 3.05e-14 | 75.1 |
MS.gene03750.t1 | AT5G56700 | 29.143 | 350 | 211 | 14 | 107 | 445 | 29 | 352 | 5.66e-14 | 73.6 |
MS.gene03750.t1 | AT5G38570 | 25.431 | 464 | 243 | 18 | 9 | 465 | 2 | 369 | 8.10e-14 | 73.2 |
MS.gene03750.t1 | AT5G15620 | 27.273 | 407 | 216 | 16 | 9 | 390 | 2 | 353 | 1.02e-13 | 73.6 |
MS.gene03750.t1 | AT3G58940 | 25.964 | 389 | 218 | 13 | 9 | 379 | 2 | 338 | 1.07e-13 | 73.9 |
MS.gene03750.t1 | AT3G58940 | 25.964 | 389 | 218 | 13 | 9 | 379 | 2 | 338 | 1.07e-13 | 73.9 |
MS.gene03750.t1 | AT3G58900 | 27.479 | 353 | 185 | 11 | 9 | 330 | 2 | 314 | 1.38e-13 | 72.0 |
MS.gene03750.t1 | AT5G22610 | 25.255 | 491 | 270 | 18 | 8 | 459 | 17 | 449 | 1.86e-13 | 72.8 |
MS.gene03750.t1 | AT3G58900 | 27.731 | 357 | 185 | 12 | 9 | 332 | 2 | 318 | 2.13e-13 | 71.6 |
MS.gene03750.t1 | AT3G58900 | 27.731 | 357 | 185 | 12 | 9 | 332 | 2 | 318 | 2.13e-13 | 71.6 |
MS.gene03750.t1 | AT5G22660 | 23.965 | 459 | 268 | 14 | 9 | 443 | 13 | 414 | 5.47e-13 | 71.2 |
MS.gene03750.t1 | AT3G59180 | 27.010 | 311 | 183 | 11 | 96 | 379 | 33 | 326 | 6.25e-13 | 71.2 |
MS.gene03750.t1 | AT5G18770 | 25.128 | 390 | 221 | 13 | 9 | 376 | 24 | 364 | 7.28e-13 | 70.5 |
MS.gene03750.t1 | AT3G51530 | 25.427 | 468 | 254 | 20 | 9 | 453 | 30 | 425 | 8.21e-13 | 70.9 |
MS.gene03750.t1 | AT2G29930 | 27.708 | 397 | 201 | 16 | 9 | 379 | 12 | 348 | 1.09e-12 | 70.5 |
MS.gene03750.t1 | AT2G29930 | 27.708 | 397 | 201 | 16 | 9 | 379 | 12 | 348 | 1.09e-12 | 70.5 |
MS.gene03750.t1 | AT3G59000 | 29.339 | 242 | 118 | 10 | 9 | 227 | 2 | 213 | 2.73e-12 | 68.6 |
MS.gene03750.t1 | AT5G25860 | 25.575 | 391 | 235 | 16 | 9 | 379 | 12 | 366 | 5.10e-12 | 68.2 |
MS.gene03750.t1 | AT5G35995 | 26.667 | 405 | 197 | 19 | 9 | 379 | 5 | 343 | 5.54e-12 | 68.2 |
MS.gene03750.t1 | AT5G35995 | 26.667 | 405 | 197 | 19 | 9 | 379 | 5 | 343 | 5.54e-12 | 68.2 |
MS.gene03750.t1 | AT5G25850 | 31.982 | 222 | 99 | 9 | 9 | 225 | 20 | 194 | 5.66e-12 | 68.2 |
MS.gene03750.t1 | AT5G56390 | 26.797 | 306 | 182 | 11 | 152 | 445 | 119 | 394 | 6.66e-12 | 67.8 |
MS.gene03750.t1 | AT3G59150 | 29.855 | 345 | 180 | 18 | 9 | 330 | 13 | 318 | 6.72e-12 | 67.8 |
MS.gene03750.t1 | AT1G66320 | 23.656 | 465 | 268 | 21 | 4 | 443 | 24 | 426 | 1.94e-11 | 66.2 |
MS.gene03750.t1 | AT1G78840 | 25.322 | 466 | 256 | 20 | 6 | 443 | 2 | 403 | 2.09e-11 | 66.2 |
MS.gene03750.t1 | AT1G78840 | 25.322 | 466 | 256 | 20 | 6 | 443 | 2 | 403 | 2.09e-11 | 66.2 |
MS.gene03750.t1 | AT3G56780 | 23.529 | 459 | 245 | 13 | 11 | 417 | 9 | 413 | 2.34e-11 | 65.9 |
MS.gene03750.t1 | AT3G56780 | 28.507 | 221 | 110 | 8 | 11 | 227 | 9 | 185 | 2.83e-11 | 65.5 |
MS.gene03750.t1 | AT5G44980 | 25.333 | 450 | 275 | 15 | 7 | 443 | 2 | 403 | 3.11e-11 | 65.9 |
MS.gene03750.t1 | AT5G44980 | 25.333 | 450 | 275 | 15 | 7 | 443 | 2 | 403 | 3.11e-11 | 65.9 |
MS.gene03750.t1 | AT1G48400 | 25.714 | 420 | 217 | 16 | 9 | 379 | 10 | 383 | 3.87e-11 | 65.5 |
MS.gene03750.t1 | AT1G22000 | 24.655 | 507 | 278 | 20 | 2 | 472 | 22 | 460 | 6.42e-11 | 64.7 |
MS.gene03750.t1 | AT5G56810 | 26.611 | 481 | 270 | 20 | 9 | 468 | 15 | 433 | 6.91e-11 | 64.7 |
Find 79 sgRNAs with CRISPR-Local
Find 110 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCATTACATTTGAATTTAA+AGG | 0.124626 | 4.3:+45078734 | MS.gene03750:CDS |
ACTTACGTATCTTGCAATTA+AGG | 0.212200 | 4.3:+45078302 | MS.gene03750:CDS |
GAAAACAGACTTGATTTCTT+TGG | 0.216371 | 4.3:-45077282 | None:intergenic |
ATTGCAAGATACGTAAGTTT+TGG | 0.274598 | 4.3:-45078297 | None:intergenic |
AGAAATCCTCCGTACTAGTA+TGG | 0.275599 | 4.3:+45078891 | MS.gene03750:CDS |
ATAAGACACGATGGAGTTAT+TGG | 0.317625 | 4.3:-45078704 | None:intergenic |
GTTTCCAACTATCTTTCTTC+GGG | 0.342208 | 4.3:-45078663 | None:intergenic |
AAAAGAAGTTCCTCTAGATA+TGG | 0.350579 | 4.3:-45077749 | None:intergenic |
AAAGTGAAGGTTGGGAATCT+TGG | 0.360773 | 4.3:-45077228 | None:intergenic |
AGTTTCCAACTATCTTTCTT+CGG | 0.372001 | 4.3:-45078664 | None:intergenic |
ACTTGTGGTCTTAAAATTGC+GGG | 0.382147 | 4.3:+45077586 | MS.gene03750:CDS |
TAGAAAGAACTTCGAGTGTC+GGG | 0.391866 | 4.3:-45077886 | None:intergenic |
ACAGATCCAAGTCAAGTTCC+TGG | 0.422138 | 4.3:-45077514 | None:intergenic |
CTTGAATTTGATAGTGAGAA+AGG | 0.429391 | 4.3:+45077329 | MS.gene03750:CDS |
TCTTTCCATTTGTCAGAGTC+CGG | 0.432460 | 4.3:+45077976 | MS.gene03750:CDS |
TAAGTGAAAAGAGGTATTGA+TGG | 0.434116 | 4.3:-45077792 | None:intergenic |
ATATGACAAATCAAATCGTC+TGG | 0.437735 | 4.3:-45077134 | None:intergenic |
AAGACTAGCTCGATGAAGAT+TGG | 0.441354 | 4.3:-45077957 | None:intergenic |
GGTAATTCAAAGTGAAGGTT+GGG | 0.443422 | 4.3:-45077236 | None:intergenic |
CTAAGGCTCGAGAGCGAGAA+AGG | 0.450221 | 4.3:+45077437 | MS.gene03750:CDS |
ACCCACATGTGTACATCATT+TGG | 0.460055 | 4.3:-45077467 | None:intergenic |
AAATTCAAATGTAATGAGAC+TGG | 0.466724 | 4.3:-45078729 | None:intergenic |
TCAAAACATTGAAACTGAGT+TGG | 0.478681 | 4.3:+45078760 | MS.gene03750:CDS |
TTCCACTTGTGAGTCACTTG+TGG | 0.484520 | 4.3:+45077571 | MS.gene03750:CDS |
GTATGCAAACTGTTAAAATC+CGG | 0.487075 | 4.3:-45077995 | None:intergenic |
AGATAGTTGGAAACTCTAGT+TGG | 0.494826 | 4.3:+45078672 | MS.gene03750:CDS |
AAAATCCGGACTCTGACAAA+TGG | 0.507415 | 4.3:-45077981 | None:intergenic |
AATTCCCGAAGAAAGATAGT+TGG | 0.512786 | 4.3:+45078659 | MS.gene03750:CDS |
CACTTGTGGTCTTAAAATTG+CGG | 0.513373 | 4.3:+45077585 | MS.gene03750:CDS |
GATAGTTGGAAACTCTAGTT+GGG | 0.515868 | 4.3:+45078673 | MS.gene03750:CDS |
TCTCTTCAATAAGTGAAAAG+AGG | 0.524063 | 4.3:-45077801 | None:intergenic |
TGGTAATTCAAAGTGAAGGT+TGG | 0.525137 | 4.3:-45077237 | None:intergenic |
TGTACACATGTGGGTTTCAA+AGG | 0.528762 | 4.3:+45077475 | MS.gene03750:CDS |
AGTTTGCATACACTCTTGAA+AGG | 0.531342 | 4.3:+45078007 | MS.gene03750:CDS |
GGTACACATGTGGGTTTCAA+AGG | 0.532413 | 4.3:+45077367 | MS.gene03750:CDS |
GAAGGTCCAGGAACTTGACT+TGG | 0.533063 | 4.3:+45077508 | MS.gene03750:CDS |
GGCATTAGATCTGAAGGTCC+AGG | 0.535762 | 4.3:+45077496 | MS.gene03750:CDS |
CCGAAAATATAAGAAAACTA+AGG | 0.538047 | 4.3:+45077420 | MS.gene03750:CDS |
GAAATCCTCCGTACTAGTAT+GGG | 0.539565 | 4.3:+45078892 | MS.gene03750:CDS |
CATGTGTTCTATCCACAAGA+TGG | 0.542093 | 4.3:+45077192 | MS.gene03750:CDS |
TTCAAAGGCATTAGATCTGA+AGG | 0.542872 | 4.3:+45077490 | MS.gene03750:CDS |
AACACAGGGTCTGAAATCTC+TGG | 0.546811 | 4.3:-45077257 | None:intergenic |
GTCGGGGCATTAATTTCTAG+TGG | 0.552699 | 4.3:-45077869 | None:intergenic |
TGTTATGCAGTTTCTCAGCA+TGG | 0.553413 | 4.3:+45078161 | MS.gene03750:intron |
AATGTCAAATCATTGACTCT+CGG | 0.558916 | 4.3:+45078037 | MS.gene03750:CDS |
GACCACAAGTGACTCACAAG+TGG | 0.565326 | 4.3:-45077573 | None:intergenic |
ATAGAAAGAACTTCGAGTGT+CGG | 0.567090 | 4.3:-45077887 | None:intergenic |
AAGTGAAAAGAGGTATTGAT+GGG | 0.577961 | 4.3:-45077791 | None:intergenic |
ATGTGTTCTATCCACAAGAT+GGG | 0.579779 | 4.3:+45077193 | MS.gene03750:CDS |
TTGATTTCTTTGGACAACAC+AGG | 0.579841 | 4.3:-45077272 | None:intergenic |
ATTTCATACCCATACTAGTA+CGG | 0.586903 | 4.3:-45078900 | None:intergenic |
TGAAAAGAAGAATTGAGTGT+TGG | 0.588267 | 4.3:-45077620 | None:intergenic |
TCACTCAAGTAAGTTAGAGA+AGG | 0.590412 | 4.3:+45078805 | MS.gene03750:CDS |
ACATGTGTACATCATTTGGC+TGG | 0.590853 | 4.3:-45077463 | None:intergenic |
AAATATCTGAGTGTTGCAGT+TGG | 0.595850 | 4.3:+45078244 | MS.gene03750:CDS |
TAGAATATATCACAGTTGAT+CGG | 0.597549 | 4.3:-45077676 | None:intergenic |
GTCTGGTTGTCCATATCTAG+AGG | 0.600089 | 4.3:+45077739 | MS.gene03750:CDS |
GGTATTGATGGGTATTCGAA+AGG | 0.606041 | 4.3:-45077780 | None:intergenic |
TGATTTCTTTGGACAACACA+GGG | 0.608438 | 4.3:-45077271 | None:intergenic |
GCAGATTGACTCCCATCTTG+TGG | 0.609178 | 4.3:-45077204 | None:intergenic |
TATGACAAATCAAATCGTCT+GGG | 0.610234 | 4.3:-45077133 | None:intergenic |
GAAAGGCTGCCGACCACATG+AGG | 0.612617 | 4.3:+45077346 | MS.gene03750:CDS |
GCCAAATGATGTACACATGT+GGG | 0.612968 | 4.3:+45077466 | MS.gene03750:CDS |
AGACACGATGGAGTTATTGG+TGG | 0.622703 | 4.3:-45078701 | None:intergenic |
CTTGTGGTCTTAAAATTGCG+GGG | 0.629681 | 4.3:+45077587 | MS.gene03750:CDS |
TCTCTGGTAATTCAAAGTGA+AGG | 0.630452 | 4.3:-45077241 | None:intergenic |
TCATACCCATACTAGTACGG+AGG | 0.632477 | 4.3:-45078897 | None:intergenic |
ACCACATGAGGTACACATGT+GGG | 0.637626 | 4.3:+45077358 | MS.gene03750:CDS |
AGTTGGAAACTCTAGTTGGG+TGG | 0.639289 | 4.3:+45078676 | MS.gene03750:CDS |
TTGTGGTCTTAAAATTGCGG+GGG | 0.646998 | 4.3:+45077588 | MS.gene03750:CDS |
AGAAAGAACTTCGAGTGTCG+GGG | 0.647155 | 4.3:-45077885 | None:intergenic |
AGATGAAGAATCTTTAGTGA+CGG | 0.652659 | 4.3:-45077653 | None:intergenic |
AGCCAAATGATGTACACATG+TGG | 0.670458 | 4.3:+45077465 | MS.gene03750:CDS |
ACATGTGTACCTCATGTGGT+CGG | 0.678063 | 4.3:-45077355 | None:intergenic |
TCACAAGTGGAAAGCCTAAG+CGG | 0.683053 | 4.3:-45077560 | None:intergenic |
GACCACATGAGGTACACATG+TGG | 0.686966 | 4.3:+45077357 | MS.gene03750:CDS |
ACCCACATGTGTACCTCATG+TGG | 0.694195 | 4.3:-45077359 | None:intergenic |
TATGCAGTTTCTCAGCATGG+AGG | 0.703511 | 4.3:+45078164 | MS.gene03750:intron |
AGACTGGTTATAAGACACGA+TGG | 0.704633 | 4.3:-45078713 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAGTAAAATAGTTTAAAAGA+AGG | - | chr4.3:45078529-45078548 | None:intergenic | 15.0% |
!!! | AAAATTCTAACGATAATTTT+TGG | + | chr4.3:45078610-45078629 | MS.gene03750:intron | 15.0% |
!!! | CAATTAATTAATTTGTTTGT+CGG | - | chr4.3:45078455-45078474 | None:intergenic | 15.0% |
!!! | TCTTTTTTAATGAAAAAAGT+TGG | + | chr4.3:45078963-45078982 | MS.gene03750:intron | 15.0% |
!! | AATGAGAATAAAATTGTATC+TGG | - | chr4.3:45078132-45078151 | None:intergenic | 20.0% |
!! | AGTTTAAAAGAAGGTTAAAT+TGG | - | chr4.3:45078520-45078539 | None:intergenic | 20.0% |
!! | ATAGATATCTGATCTATATT+TGG | + | chr4.3:45078481-45078500 | MS.gene03750:intron | 20.0% |
!! | ATGAGAATAAAATTGTATCT+GGG | - | chr4.3:45078131-45078150 | None:intergenic | 20.0% |
!! | CTCATTACATTTGAATTTAA+AGG | + | chr4.3:45078734-45078753 | MS.gene03750:CDS | 20.0% |
!! | TAGATATCTGATCTATATTT+GGG | + | chr4.3:45078482-45078501 | MS.gene03750:intron | 20.0% |
!!! | AAAATTTTAGAAAGAGAAAC+AGG | - | chr4.3:45077848-45077867 | None:intergenic | 20.0% |
!!! | CCTTAGTTTTCTTATATTTT+CGG | - | chr4.3:45077423-45077442 | None:intergenic | 20.0% |
!!! | TTCGTTTTCTTATATTTTCT+TGG | - | chr4.3:45077307-45077326 | None:intergenic | 20.0% |
! | AAACAGGCAAAAATAAAGAA+AGG | - | chr4.3:45077832-45077851 | None:intergenic | 25.0% |
! | AAATTCAAATGTAATGAGAC+TGG | - | chr4.3:45078732-45078751 | None:intergenic | 25.0% |
! | AATATGATAAGCTCAAAATC+TGG | + | chr4.3:45078378-45078397 | MS.gene03750:intron | 25.0% |
! | CCGAAAATATAAGAAAACTA+AGG | + | chr4.3:45077420-45077439 | MS.gene03750:CDS | 25.0% |
! | CTATTTACTATATATCCAGT+TGG | + | chr4.3:45078587-45078606 | MS.gene03750:intron | 25.0% |
! | TAAAAGAAGGTTAAATTGGT+AGG | - | chr4.3:45078516-45078535 | None:intergenic | 25.0% |
! | TAGAATATATCACAGTTGAT+CGG | - | chr4.3:45077679-45077698 | None:intergenic | 25.0% |
!! | AATTATTCAACATTTGTTGC+AGG | + | chr4.3:45079048-45079067 | MS.gene03750:intron | 25.0% |
!! | ACTCTTCTTTTCTTTAAACT+GGG | - | chr4.3:45078845-45078864 | None:intergenic | 25.0% |
!! | GAAAGTATATAAACTCTGTA+TGG | - | chr4.3:45078945-45078964 | None:intergenic | 25.0% |
!! | TACTCTTCTTTTCTTTAAAC+TGG | - | chr4.3:45078846-45078865 | None:intergenic | 25.0% |
!! | TATAAGACTCTTTTGTTGAT+AGG | - | chr4.3:45077169-45077188 | None:intergenic | 25.0% |
!! | TTTGATGATCAAAAAGAGTA+TGG | + | chr4.3:45077701-45077720 | MS.gene03750:CDS | 25.0% |
!! | TTTGCAAACTCATATTTTCT+AGG | - | chr4.3:45077932-45077951 | None:intergenic | 25.0% |
AAAAGAAGTTCCTCTAGATA+TGG | - | chr4.3:45077752-45077771 | None:intergenic | 30.0% | |
ACTTACGTATCTTGCAATTA+AGG | + | chr4.3:45078302-45078321 | MS.gene03750:CDS | 30.0% | |
AGATGAAGAATCTTTAGTGA+CGG | - | chr4.3:45077656-45077675 | None:intergenic | 30.0% | |
AGTAGAAAAAAGTTTACGCA+AGG | + | chr4.3:45078862-45078881 | MS.gene03750:CDS | 30.0% | |
AGTTTCCAACTATCTTTCTT+CGG | - | chr4.3:45078667-45078686 | None:intergenic | 30.0% | |
ATATGACAAATCAAATCGTC+TGG | - | chr4.3:45077137-45077156 | None:intergenic | 30.0% | |
ATTTCATACCCATACTAGTA+CGG | - | chr4.3:45078903-45078922 | None:intergenic | 30.0% | |
GAAAACAGACTTGATTTCTT+TGG | - | chr4.3:45077285-45077304 | None:intergenic | 30.0% | |
GTAGAAAAAAGTTTACGCAA+GGG | + | chr4.3:45078863-45078882 | MS.gene03750:CDS | 30.0% | |
GTATGCAAACTGTTAAAATC+CGG | - | chr4.3:45077998-45078017 | None:intergenic | 30.0% | |
TAGAAAAAAGTTTACGCAAG+GGG | + | chr4.3:45078864-45078883 | MS.gene03750:CDS | 30.0% | |
TATGACAAATCAAATCGTCT+GGG | - | chr4.3:45077136-45077155 | None:intergenic | 30.0% | |
TCAAAACATTGAAACTGAGT+TGG | + | chr4.3:45078760-45078779 | MS.gene03750:CDS | 30.0% | |
TCTCTTCAATAAGTGAAAAG+AGG | - | chr4.3:45077804-45077823 | None:intergenic | 30.0% | |
TGAAAAGAAGAATTGAGTGT+TGG | - | chr4.3:45077623-45077642 | None:intergenic | 30.0% | |
! | ATTGCAAGATACGTAAGTTT+TGG | - | chr4.3:45078300-45078319 | None:intergenic | 30.0% |
! | TATCGTTAGAATTTTCCAAC+TGG | - | chr4.3:45078605-45078624 | None:intergenic | 30.0% |
!! | AAGTGAAAAGAGGTATTGAT+GGG | - | chr4.3:45077794-45077813 | None:intergenic | 30.0% |
!! | AATGTCAAATCATTGACTCT+CGG | + | chr4.3:45078037-45078056 | MS.gene03750:CDS | 30.0% |
!! | CTTGAATTTGATAGTGAGAA+AGG | + | chr4.3:45077329-45077348 | MS.gene03750:CDS | 30.0% |
!! | TAAGTGAAAAGAGGTATTGA+TGG | - | chr4.3:45077795-45077814 | None:intergenic | 30.0% |
AATTCCCGAAGAAAGATAGT+TGG | + | chr4.3:45078659-45078678 | MS.gene03750:CDS | 35.0% | |
AGATAGTTGGAAACTCTAGT+TGG | + | chr4.3:45078672-45078691 | MS.gene03750:CDS | 35.0% | |
AGTTTGCATACACTCTTGAA+AGG | + | chr4.3:45078007-45078026 | MS.gene03750:CDS | 35.0% | |
ATAAGACACGATGGAGTTAT+TGG | - | chr4.3:45078707-45078726 | None:intergenic | 35.0% | |
ATAGAAAGAACTTCGAGTGT+CGG | - | chr4.3:45077890-45077909 | None:intergenic | 35.0% | |
ATGTGTTCTATCCACAAGAT+GGG | + | chr4.3:45077193-45077212 | MS.gene03750:CDS | 35.0% | |
GATAGTTGGAAACTCTAGTT+GGG | + | chr4.3:45078673-45078692 | MS.gene03750:CDS | 35.0% | |
GGTAATTCAAAGTGAAGGTT+GGG | - | chr4.3:45077239-45077258 | None:intergenic | 35.0% | |
GTTTCCAACTATCTTTCTTC+GGG | - | chr4.3:45078666-45078685 | None:intergenic | 35.0% | |
TCACTCAAGTAAGTTAGAGA+AGG | + | chr4.3:45078805-45078824 | MS.gene03750:CDS | 35.0% | |
TCTCTGGTAATTCAAAGTGA+AGG | - | chr4.3:45077244-45077263 | None:intergenic | 35.0% | |
TGATTTCTTTGGACAACACA+GGG | - | chr4.3:45077274-45077293 | None:intergenic | 35.0% | |
TGGTAATTCAAAGTGAAGGT+TGG | - | chr4.3:45077240-45077259 | None:intergenic | 35.0% | |
TGTATCTGGGTGACAAAATA+TGG | - | chr4.3:45078118-45078137 | None:intergenic | 35.0% | |
TTGATTTCTTTGGACAACAC+AGG | - | chr4.3:45077275-45077294 | None:intergenic | 35.0% | |
! | AAAAAATCTTGTTGCCGCTT+AGG | + | chr4.3:45077546-45077565 | MS.gene03750:CDS | 35.0% |
! | AAATATCTGAGTGTTGCAGT+TGG | + | chr4.3:45078244-45078263 | MS.gene03750:CDS | 35.0% |
! | ACTTGTGGTCTTAAAATTGC+GGG | + | chr4.3:45077586-45077605 | MS.gene03750:CDS | 35.0% |
! | CACTTGTGGTCTTAAAATTG+CGG | + | chr4.3:45077585-45077604 | MS.gene03750:CDS | 35.0% |
! | GGTCTCAATAATTTTCTGTC+TGG | + | chr4.3:45077722-45077741 | MS.gene03750:CDS | 35.0% |
!! | TTCAAAGGCATTAGATCTGA+AGG | + | chr4.3:45077490-45077509 | MS.gene03750:CDS | 35.0% |
AAAATCCGGACTCTGACAAA+TGG | - | chr4.3:45077984-45078003 | None:intergenic | 40.0% | |
AAAGTGAAGGTTGGGAATCT+TGG | - | chr4.3:45077231-45077250 | None:intergenic | 40.0% | |
ACATGTGTACATCATTTGGC+TGG | - | chr4.3:45077466-45077485 | None:intergenic | 40.0% | |
ACCCACATGTGTACATCATT+TGG | - | chr4.3:45077470-45077489 | None:intergenic | 40.0% | |
AGAAATCCTCCGTACTAGTA+TGG | + | chr4.3:45078891-45078910 | MS.gene03750:CDS | 40.0% | |
AGCCAAATGATGTACACATG+TGG | + | chr4.3:45077465-45077484 | MS.gene03750:CDS | 40.0% | |
CATGTGTTCTATCCACAAGA+TGG | + | chr4.3:45077192-45077211 | MS.gene03750:CDS | 40.0% | |
GAAATCCTCCGTACTAGTAT+GGG | + | chr4.3:45078892-45078911 | MS.gene03750:CDS | 40.0% | |
GAAGTGCATAGACTTAGCAA+AGG | + | chr4.3:45078406-45078425 | MS.gene03750:intron | 40.0% | |
GCCAAATGATGTACACATGT+GGG | + | chr4.3:45077466-45077485 | MS.gene03750:CDS | 40.0% | |
TAGAAAGAACTTCGAGTGTC+GGG | - | chr4.3:45077889-45077908 | None:intergenic | 40.0% | |
TCTTTCCATTTGTCAGAGTC+CGG | + | chr4.3:45077976-45077995 | MS.gene03750:CDS | 40.0% | |
TGTACACATGTGGGTTTCAA+AGG | + | chr4.3:45077475-45077494 | MS.gene03750:CDS | 40.0% | |
TGTTATGCAGTTTCTCAGCA+TGG | + | chr4.3:45078161-45078180 | MS.gene03750:intron | 40.0% | |
! | AAGACTAGCTCGATGAAGAT+TGG | - | chr4.3:45077960-45077979 | None:intergenic | 40.0% |
! | AGACTGGTTATAAGACACGA+TGG | - | chr4.3:45078716-45078735 | None:intergenic | 40.0% |
! | CTTGTGGTCTTAAAATTGCG+GGG | + | chr4.3:45077587-45077606 | MS.gene03750:CDS | 40.0% |
! | TTGTGGTCTTAAAATTGCGG+GGG | + | chr4.3:45077588-45077607 | MS.gene03750:CDS | 40.0% |
!! | GGTATTGATGGGTATTCGAA+AGG | - | chr4.3:45077783-45077802 | None:intergenic | 40.0% |
ACAGATCCAAGTCAAGTTCC+TGG | - | chr4.3:45077517-45077536 | None:intergenic | 45.0% | |
ACATGTGTACCTCATGTGGT+CGG | - | chr4.3:45077358-45077377 | None:intergenic | 45.0% | |
ACCACATGAGGTACACATGT+GGG | + | chr4.3:45077358-45077377 | MS.gene03750:CDS | 45.0% | |
AGACACGATGGAGTTATTGG+TGG | - | chr4.3:45078704-45078723 | None:intergenic | 45.0% | |
AGTTGGAAACTCTAGTTGGG+TGG | + | chr4.3:45078676-45078695 | MS.gene03750:CDS | 45.0% | |
GGTACACATGTGGGTTTCAA+AGG | + | chr4.3:45077367-45077386 | MS.gene03750:CDS | 45.0% | |
GTCTGGTTGTCCATATCTAG+AGG | + | chr4.3:45077739-45077758 | MS.gene03750:CDS | 45.0% | |
TATGCAGTTTCTCAGCATGG+AGG | + | chr4.3:45078164-45078183 | MS.gene03750:intron | 45.0% | |
TCACAAGTGGAAAGCCTAAG+CGG | - | chr4.3:45077563-45077582 | None:intergenic | 45.0% | |
TCATACCCATACTAGTACGG+AGG | - | chr4.3:45078900-45078919 | None:intergenic | 45.0% | |
TTCCACTTGTGAGTCACTTG+TGG | + | chr4.3:45077571-45077590 | MS.gene03750:CDS | 45.0% | |
! | AACACAGGGTCTGAAATCTC+TGG | - | chr4.3:45077260-45077279 | None:intergenic | 45.0% |
! | AGAAAGAACTTCGAGTGTCG+GGG | - | chr4.3:45077888-45077907 | None:intergenic | 45.0% |
! | GTCGGGGCATTAATTTCTAG+TGG | - | chr4.3:45077872-45077891 | None:intergenic | 45.0% |
ACCCACATGTGTACCTCATG+TGG | - | chr4.3:45077362-45077381 | None:intergenic | 50.0% | |
GAAGGTCCAGGAACTTGACT+TGG | + | chr4.3:45077508-45077527 | MS.gene03750:CDS | 50.0% | |
GACCACAAGTGACTCACAAG+TGG | - | chr4.3:45077576-45077595 | None:intergenic | 50.0% | |
GACCACATGAGGTACACATG+TGG | + | chr4.3:45077357-45077376 | MS.gene03750:CDS | 50.0% | |
GGCATTAGATCTGAAGGTCC+AGG | + | chr4.3:45077496-45077515 | MS.gene03750:CDS | 50.0% | |
! | GCAGATTGACTCCCATCTTG+TGG | - | chr4.3:45077207-45077226 | None:intergenic | 50.0% |
CTAAGGCTCGAGAGCGAGAA+AGG | + | chr4.3:45077437-45077456 | MS.gene03750:CDS | 55.0% | |
GAAAGGCTGCCGACCACATG+AGG | + | chr4.3:45077346-45077365 | MS.gene03750:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 45077092 | 45079087 | 45077092 | ID=MS.gene03750 |
chr4.3 | mRNA | 45077092 | 45079087 | 45077092 | ID=MS.gene03750.t1;Parent=MS.gene03750 |
chr4.3 | exon | 45077092 | 45078075 | 45077092 | ID=MS.gene03750.t1.exon1;Parent=MS.gene03750.t1 |
chr4.3 | CDS | 45077092 | 45078075 | 45077092 | ID=cds.MS.gene03750.t1;Parent=MS.gene03750.t1 |
chr4.3 | exon | 45078171 | 45078323 | 45078171 | ID=MS.gene03750.t1.exon2;Parent=MS.gene03750.t1 |
chr4.3 | CDS | 45078171 | 45078323 | 45078171 | ID=cds.MS.gene03750.t1;Parent=MS.gene03750.t1 |
chr4.3 | exon | 45078644 | 45078913 | 45078644 | ID=MS.gene03750.t1.exon3;Parent=MS.gene03750.t1 |
chr4.3 | CDS | 45078644 | 45078913 | 45078644 | ID=cds.MS.gene03750.t1;Parent=MS.gene03750.t1 |
chr4.3 | exon | 45079070 | 45079087 | 45079070 | ID=MS.gene03750.t1.exon4;Parent=MS.gene03750.t1 |
chr4.3 | CDS | 45079070 | 45079087 | 45079070 | ID=cds.MS.gene03750.t1;Parent=MS.gene03750.t1 |
Gene Sequence |
Protein sequence |