Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09371.t1 | XP_013455881.1 | 93.1 | 437 | 30 | 0 | 1 | 437 | 1 | 437 | 3.00E-213 | 751.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09371.t1 | Q3EAE5 | 27.4 | 457 | 244 | 18 | 9 | 439 | 2 | 396 | 1.3e-18 | 95.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09371.t1 | A0A072UJS8 | 93.1 | 437 | 30 | 0 | 1 | 437 | 1 | 437 | 2.2e-213 | 751.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09371.t1 | MTR_4g056070 | 94.966 | 437 | 22 | 0 | 1 | 437 | 1 | 437 | 0.0 | 842 |
MS.gene09371.t1 | MTR_4g055990 | 74.900 | 502 | 80 | 3 | 1 | 459 | 1 | 499 | 0.0 | 724 |
MS.gene09371.t1 | MTR_4g055990 | 81.532 | 444 | 74 | 2 | 1 | 439 | 1 | 441 | 0.0 | 716 |
MS.gene09371.t1 | MTR_4g056040 | 79.130 | 460 | 85 | 4 | 1 | 459 | 1 | 450 | 0.0 | 714 |
MS.gene09371.t1 | MTR_4g055580 | 74.549 | 499 | 84 | 4 | 1 | 461 | 92 | 585 | 0.0 | 707 |
MS.gene09371.t1 | MTR_4g056020 | 70.825 | 497 | 67 | 2 | 1 | 459 | 1 | 457 | 0.0 | 676 |
MS.gene09371.t1 | MTR_4g056030 | 68.228 | 491 | 78 | 2 | 1 | 453 | 1 | 451 | 0.0 | 642 |
MS.gene09371.t1 | MTR_1g038710 | 62.217 | 442 | 127 | 4 | 1 | 439 | 11 | 415 | 1.29e-175 | 500 |
MS.gene09371.t1 | MTR_1g090883 | 55.980 | 393 | 129 | 6 | 2 | 392 | 12 | 362 | 9.35e-130 | 380 |
MS.gene09371.t1 | MTR_7g110920 | 56.563 | 320 | 85 | 3 | 139 | 439 | 1 | 285 | 3.16e-109 | 326 |
MS.gene09371.t1 | MTR_4g093690 | 50.321 | 312 | 106 | 8 | 1 | 308 | 10 | 276 | 9.83e-76 | 238 |
MS.gene09371.t1 | MTR_4g056020 | 64.596 | 161 | 19 | 1 | 337 | 459 | 1 | 161 | 2.52e-61 | 197 |
MS.gene09371.t1 | MTR_4g056010 | 95.000 | 100 | 5 | 0 | 108 | 207 | 1 | 100 | 7.68e-61 | 194 |
MS.gene09371.t1 | MTR_1g090900 | 52.055 | 219 | 62 | 5 | 1 | 216 | 1 | 179 | 4.99e-53 | 177 |
MS.gene09371.t1 | MTR_5g084070 | 29.345 | 443 | 236 | 15 | 5 | 439 | 9 | 382 | 8.72e-26 | 109 |
MS.gene09371.t1 | MTR_7g115270 | 27.416 | 445 | 218 | 17 | 9 | 443 | 12 | 361 | 1.03e-23 | 102 |
MS.gene09371.t1 | MTR_8g014260 | 28.634 | 454 | 244 | 18 | 6 | 439 | 13 | 406 | 1.93e-23 | 102 |
MS.gene09371.t1 | MTR_8g062270 | 28.604 | 444 | 257 | 17 | 9 | 439 | 16 | 412 | 2.78e-23 | 102 |
MS.gene09371.t1 | MTR_8g445780 | 27.438 | 441 | 247 | 12 | 7 | 436 | 11 | 389 | 3.11e-23 | 101 |
MS.gene09371.t1 | MTR_5g080710 | 28.571 | 441 | 240 | 14 | 9 | 439 | 33 | 408 | 3.23e-23 | 102 |
MS.gene09371.t1 | MTR_3g108560 | 28.412 | 447 | 196 | 18 | 6 | 443 | 17 | 348 | 2.08e-22 | 99.0 |
MS.gene09371.t1 | MTR_8g058970 | 26.782 | 463 | 276 | 17 | 4 | 444 | 14 | 435 | 9.74e-22 | 97.8 |
MS.gene09371.t1 | MTR_8g467800 | 28.540 | 459 | 251 | 16 | 5 | 444 | 16 | 416 | 3.50e-21 | 96.3 |
MS.gene09371.t1 | MTR_7g056433 | 25.446 | 448 | 220 | 18 | 4 | 443 | 7 | 348 | 2.84e-20 | 92.8 |
MS.gene09371.t1 | MTR_8g468810 | 26.949 | 449 | 263 | 17 | 4 | 439 | 20 | 416 | 6.66e-20 | 92.4 |
MS.gene09371.t1 | MTR_8g468840 | 26.522 | 460 | 256 | 18 | 8 | 444 | 13 | 413 | 1.41e-19 | 91.3 |
MS.gene09371.t1 | MTR_1g041245 | 32.314 | 229 | 109 | 7 | 9 | 236 | 11 | 194 | 3.65e-19 | 89.4 |
MS.gene09371.t1 | MTR_2g083840 | 28.879 | 464 | 233 | 22 | 9 | 444 | 21 | 415 | 5.58e-19 | 89.4 |
MS.gene09371.t1 | MTR_5g008950 | 25.390 | 449 | 196 | 17 | 11 | 443 | 1 | 326 | 1.02e-18 | 88.2 |
MS.gene09371.t1 | MTR_1g090890 | 71.698 | 53 | 12 | 1 | 390 | 439 | 29 | 81 | 1.03e-18 | 82.0 |
MS.gene09371.t1 | MTR_5g007410 | 24.829 | 439 | 225 | 18 | 11 | 443 | 28 | 367 | 6.39e-16 | 80.1 |
MS.gene09371.t1 | MTR_3g109982 | 26.489 | 487 | 241 | 17 | 9 | 443 | 13 | 434 | 5.96e-15 | 77.8 |
MS.gene09371.t1 | MTR_8g058965 | 27.719 | 469 | 247 | 21 | 9 | 447 | 13 | 419 | 2.92e-14 | 75.1 |
MS.gene09371.t1 | MTR_8g467800 | 29.191 | 346 | 175 | 11 | 5 | 334 | 16 | 307 | 1.88e-13 | 71.6 |
MS.gene09371.t1 | MTR_3g108560 | 28.426 | 394 | 156 | 17 | 6 | 387 | 17 | 296 | 2.01e-13 | 71.2 |
MS.gene09371.t1 | MTR_2g007400 | 25.229 | 436 | 215 | 17 | 9 | 427 | 12 | 353 | 3.74e-13 | 71.2 |
MS.gene09371.t1 | MTR_3g023630 | 24.829 | 439 | 217 | 17 | 9 | 443 | 8 | 337 | 2.46e-12 | 68.6 |
MS.gene09371.t1 | MTR_5g092960 | 26.981 | 467 | 258 | 21 | 5 | 444 | 15 | 425 | 3.96e-12 | 68.6 |
MS.gene09371.t1 | MTR_4g080773 | 27.716 | 451 | 259 | 21 | 9 | 439 | 19 | 422 | 4.09e-12 | 68.6 |
MS.gene09371.t1 | MTR_4g080773 | 27.716 | 451 | 259 | 21 | 9 | 439 | 19 | 422 | 4.57e-12 | 68.2 |
MS.gene09371.t1 | MTR_3g048290 | 26.914 | 405 | 223 | 15 | 5 | 386 | 19 | 373 | 5.87e-12 | 67.8 |
MS.gene09371.t1 | MTR_8g017280 | 27.077 | 325 | 169 | 12 | 7 | 317 | 34 | 304 | 7.49e-12 | 67.4 |
MS.gene09371.t1 | MTR_8g017280 | 27.483 | 302 | 159 | 11 | 4 | 299 | 31 | 278 | 9.02e-12 | 66.2 |
MS.gene09371.t1 | MTR_5g073370 | 24.194 | 434 | 229 | 16 | 6 | 439 | 2 | 335 | 2.90e-11 | 65.5 |
MS.gene09371.t1 | MTR_7g110910 | 81.579 | 38 | 7 | 0 | 1 | 38 | 158 | 195 | 7.08e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09371.t1 | AT4G00315 | 28.821 | 458 | 244 | 19 | 9 | 443 | 2 | 400 | 8.17e-26 | 109 |
MS.gene09371.t1 | AT4G14103 | 27.845 | 413 | 217 | 14 | 9 | 396 | 8 | 364 | 5.33e-24 | 103 |
MS.gene09371.t1 | AT4G14103 | 27.845 | 413 | 217 | 14 | 9 | 396 | 8 | 364 | 5.33e-24 | 103 |
MS.gene09371.t1 | AT5G38396 | 29.484 | 407 | 209 | 16 | 9 | 387 | 2 | 358 | 9.34e-24 | 103 |
MS.gene09371.t1 | AT5G41830 | 25.338 | 517 | 262 | 16 | 3 | 457 | 7 | 461 | 1.13e-23 | 103 |
MS.gene09371.t1 | AT4G14103 | 28.180 | 401 | 207 | 14 | 9 | 384 | 8 | 352 | 1.87e-23 | 102 |
MS.gene09371.t1 | AT1G51370 | 29.581 | 453 | 230 | 16 | 7 | 443 | 17 | 396 | 6.38e-23 | 101 |
MS.gene09371.t1 | AT4G00320 | 27.187 | 423 | 242 | 11 | 3 | 401 | 7 | 387 | 6.74e-23 | 101 |
MS.gene09371.t1 | AT1G55660 | 27.293 | 458 | 251 | 19 | 9 | 443 | 53 | 451 | 9.16e-23 | 101 |
MS.gene09371.t1 | AT3G50710 | 26.998 | 463 | 247 | 14 | 9 | 451 | 2 | 393 | 2.06e-22 | 99.8 |
MS.gene09371.t1 | AT3G59160 | 25.629 | 437 | 236 | 14 | 9 | 400 | 13 | 405 | 3.13e-22 | 99.4 |
MS.gene09371.t1 | AT3G59190 | 27.612 | 402 | 219 | 10 | 9 | 384 | 12 | 367 | 3.73e-22 | 98.2 |
MS.gene09371.t1 | AT4G14096 | 27.027 | 407 | 213 | 13 | 8 | 391 | 7 | 352 | 5.20e-22 | 99.0 |
MS.gene09371.t1 | AT4G14096 | 27.027 | 407 | 213 | 13 | 8 | 391 | 7 | 352 | 5.20e-22 | 99.0 |
MS.gene09371.t1 | AT2G26860 | 27.211 | 441 | 253 | 13 | 9 | 439 | 2 | 384 | 8.16e-22 | 97.4 |
MS.gene09371.t1 | AT2G26860 | 27.211 | 441 | 253 | 13 | 9 | 439 | 2 | 384 | 8.16e-22 | 97.4 |
MS.gene09371.t1 | AT5G41840 | 28.019 | 414 | 217 | 13 | 9 | 385 | 14 | 383 | 9.34e-22 | 98.6 |
MS.gene09371.t1 | AT4G26340 | 25.843 | 445 | 253 | 14 | 9 | 443 | 2 | 379 | 1.14e-21 | 97.4 |
MS.gene09371.t1 | AT3G59190 | 27.612 | 402 | 219 | 10 | 9 | 384 | 12 | 367 | 1.20e-21 | 98.2 |
MS.gene09371.t1 | AT4G10400 | 25.934 | 455 | 257 | 14 | 9 | 456 | 2 | 383 | 2.04e-21 | 96.3 |
MS.gene09371.t1 | AT4G10400 | 25.934 | 455 | 257 | 14 | 9 | 456 | 2 | 383 | 2.04e-21 | 96.3 |
MS.gene09371.t1 | AT4G10400 | 25.934 | 455 | 257 | 14 | 9 | 456 | 2 | 383 | 2.04e-21 | 96.3 |
MS.gene09371.t1 | AT5G56400 | 28.000 | 450 | 239 | 20 | 9 | 443 | 33 | 412 | 1.32e-20 | 94.4 |
MS.gene09371.t1 | AT1G58310 | 27.426 | 474 | 247 | 18 | 9 | 432 | 8 | 434 | 1.70e-20 | 94.4 |
MS.gene09371.t1 | AT5G56440 | 26.609 | 466 | 262 | 15 | 9 | 458 | 2 | 403 | 2.85e-20 | 93.2 |
MS.gene09371.t1 | AT1G51370 | 29.330 | 433 | 218 | 15 | 7 | 424 | 17 | 376 | 2.85e-20 | 93.2 |
MS.gene09371.t1 | AT5G56380 | 25.664 | 452 | 255 | 12 | 9 | 439 | 2 | 393 | 7.54e-20 | 92.0 |
MS.gene09371.t1 | AT5G56380 | 25.664 | 452 | 255 | 12 | 9 | 439 | 2 | 393 | 7.54e-20 | 92.0 |
MS.gene09371.t1 | AT3G03030 | 27.027 | 407 | 220 | 11 | 9 | 385 | 2 | 361 | 8.94e-20 | 92.0 |
MS.gene09371.t1 | AT5G53840 | 28.446 | 457 | 233 | 19 | 7 | 443 | 16 | 398 | 1.16e-19 | 91.7 |
MS.gene09371.t1 | AT4G13960 | 27.114 | 402 | 218 | 11 | 9 | 387 | 2 | 351 | 1.72e-19 | 91.3 |
MS.gene09371.t1 | AT4G13960 | 27.114 | 402 | 218 | 11 | 9 | 387 | 2 | 351 | 1.72e-19 | 91.3 |
MS.gene09371.t1 | AT3G59170 | 27.335 | 439 | 241 | 17 | 9 | 406 | 7 | 408 | 2.34e-19 | 90.9 |
MS.gene09371.t1 | AT3G59210 | 27.350 | 468 | 264 | 14 | 5 | 448 | 3 | 418 | 8.25e-19 | 89.4 |
MS.gene09371.t1 | AT3G59210 | 27.350 | 468 | 264 | 14 | 5 | 448 | 3 | 418 | 8.25e-19 | 89.4 |
MS.gene09371.t1 | AT3G59210 | 27.350 | 468 | 264 | 14 | 5 | 448 | 3 | 418 | 8.25e-19 | 89.4 |
MS.gene09371.t1 | AT3G59210 | 27.350 | 468 | 264 | 14 | 5 | 448 | 3 | 418 | 8.25e-19 | 89.4 |
MS.gene09371.t1 | AT3G59210 | 27.350 | 468 | 264 | 14 | 5 | 448 | 3 | 418 | 8.25e-19 | 89.4 |
MS.gene09371.t1 | AT3G58920 | 27.725 | 422 | 221 | 16 | 9 | 395 | 2 | 374 | 4.28e-18 | 87.0 |
MS.gene09371.t1 | AT4G26350 | 24.062 | 453 | 260 | 14 | 9 | 443 | 2 | 388 | 5.06e-18 | 86.7 |
MS.gene09371.t1 | AT1G32375 | 26.009 | 446 | 246 | 17 | 9 | 439 | 2 | 378 | 5.97e-18 | 86.3 |
MS.gene09371.t1 | AT1G32375 | 26.009 | 446 | 246 | 17 | 9 | 439 | 2 | 378 | 5.97e-18 | 86.3 |
MS.gene09371.t1 | AT5G38590 | 26.126 | 444 | 249 | 16 | 9 | 443 | 2 | 375 | 6.28e-18 | 85.9 |
MS.gene09371.t1 | AT1G69630 | 27.543 | 403 | 224 | 14 | 2 | 387 | 11 | 362 | 9.37e-18 | 85.9 |
MS.gene09371.t1 | AT3G59200 | 25.670 | 448 | 238 | 15 | 8 | 419 | 6 | 394 | 2.04e-17 | 85.1 |
MS.gene09371.t1 | AT2G42720 | 28.954 | 411 | 195 | 18 | 9 | 387 | 2 | 347 | 2.42e-17 | 84.3 |
MS.gene09371.t1 | AT1G78760 | 27.171 | 449 | 231 | 19 | 7 | 427 | 14 | 394 | 3.20e-17 | 84.3 |
MS.gene09371.t1 | AT1G55660 | 26.879 | 346 | 183 | 13 | 9 | 335 | 53 | 347 | 3.52e-17 | 83.2 |
MS.gene09371.t1 | AT1G51370 | 29.517 | 393 | 189 | 15 | 7 | 384 | 17 | 336 | 7.82e-17 | 82.0 |
MS.gene09371.t1 | AT4G22280 | 28.398 | 412 | 218 | 13 | 9 | 406 | 2 | 350 | 9.00e-17 | 82.4 |
MS.gene09371.t1 | AT3G03030 | 27.654 | 358 | 186 | 10 | 9 | 336 | 2 | 316 | 1.38e-16 | 81.3 |
MS.gene09371.t1 | AT5G56410 | 27.093 | 454 | 263 | 21 | 9 | 445 | 2 | 404 | 1.90e-16 | 82.0 |
MS.gene09371.t1 | AT3G58900 | 26.250 | 480 | 273 | 16 | 9 | 453 | 2 | 435 | 3.32e-16 | 81.3 |
MS.gene09371.t1 | AT3G58860 | 26.343 | 391 | 223 | 12 | 6 | 384 | 4 | 341 | 4.03e-16 | 80.9 |
MS.gene09371.t1 | AT2G26030 | 25.000 | 464 | 259 | 18 | 9 | 444 | 4 | 406 | 9.43e-16 | 79.7 |
MS.gene09371.t1 | AT4G22280 | 28.753 | 393 | 203 | 13 | 9 | 387 | 2 | 331 | 1.01e-15 | 78.6 |
MS.gene09371.t1 | AT3G26930 | 27.314 | 443 | 242 | 17 | 8 | 439 | 20 | 393 | 1.65e-15 | 79.0 |
MS.gene09371.t1 | AT3G42770 | 30.267 | 337 | 170 | 13 | 14 | 334 | 4 | 291 | 1.72e-15 | 79.3 |
MS.gene09371.t1 | AT1G52650 | 26.781 | 407 | 214 | 16 | 9 | 387 | 2 | 352 | 2.31e-15 | 78.6 |
MS.gene09371.t1 | AT5G56370 | 26.697 | 442 | 238 | 18 | 9 | 439 | 2 | 368 | 3.02e-15 | 77.8 |
MS.gene09371.t1 | AT5G56370 | 26.697 | 442 | 238 | 18 | 9 | 439 | 2 | 368 | 3.02e-15 | 77.8 |
MS.gene09371.t1 | AT2G26030 | 24.892 | 462 | 257 | 18 | 9 | 444 | 4 | 401 | 3.38e-15 | 77.8 |
MS.gene09371.t1 | AT2G26030 | 24.892 | 462 | 257 | 18 | 9 | 444 | 4 | 401 | 3.38e-15 | 77.8 |
MS.gene09371.t1 | AT5G38392 | 32.787 | 244 | 106 | 10 | 9 | 239 | 2 | 200 | 4.63e-15 | 74.7 |
MS.gene09371.t1 | AT4G13965 | 27.740 | 447 | 238 | 18 | 9 | 443 | 10 | 383 | 7.65e-15 | 76.6 |
MS.gene09371.t1 | AT4G15060 | 26.022 | 465 | 231 | 19 | 6 | 435 | 23 | 409 | 8.41e-15 | 76.6 |
MS.gene09371.t1 | AT1G66300 | 25.806 | 403 | 223 | 13 | 4 | 386 | 24 | 370 | 8.90e-15 | 76.6 |
MS.gene09371.t1 | AT4G13985 | 26.683 | 401 | 237 | 13 | 4 | 390 | 14 | 371 | 1.00e-14 | 76.6 |
MS.gene09371.t1 | AT5G56690 | 28.507 | 442 | 230 | 23 | 11 | 432 | 4 | 379 | 1.45e-14 | 75.9 |
MS.gene09371.t1 | AT2G42730 | 27.093 | 454 | 254 | 18 | 9 | 438 | 5 | 405 | 1.73e-14 | 75.9 |
MS.gene09371.t1 | AT3G26930 | 29.210 | 291 | 173 | 12 | 159 | 439 | 81 | 348 | 2.25e-14 | 75.1 |
MS.gene09371.t1 | AT3G59240 | 26.515 | 396 | 224 | 12 | 9 | 387 | 8 | 353 | 2.54e-14 | 75.5 |
MS.gene09371.t1 | AT2G29930 | 27.384 | 409 | 195 | 19 | 9 | 387 | 12 | 348 | 2.78e-14 | 75.1 |
MS.gene09371.t1 | AT2G29930 | 27.384 | 409 | 195 | 19 | 9 | 387 | 12 | 348 | 2.78e-14 | 75.1 |
MS.gene09371.t1 | AT1G66310 | 26.471 | 408 | 235 | 15 | 4 | 399 | 14 | 368 | 6.13e-14 | 73.9 |
MS.gene09371.t1 | AT3G59180 | 28.617 | 311 | 178 | 11 | 104 | 387 | 33 | 326 | 6.75e-14 | 73.9 |
MS.gene09371.t1 | AT3G44060 | 28.010 | 407 | 215 | 20 | 14 | 400 | 4 | 352 | 7.43e-14 | 73.6 |
MS.gene09371.t1 | AT3G49030 | 25.926 | 432 | 240 | 16 | 7 | 427 | 19 | 381 | 2.37e-13 | 72.4 |
MS.gene09371.t1 | AT5G56700 | 29.970 | 337 | 197 | 16 | 115 | 439 | 29 | 338 | 2.48e-13 | 71.6 |
MS.gene09371.t1 | AT1G78750 | 26.730 | 419 | 239 | 16 | 2 | 401 | 11 | 380 | 3.46e-13 | 71.6 |
MS.gene09371.t1 | AT1G78750 | 26.730 | 419 | 239 | 16 | 2 | 401 | 11 | 380 | 3.46e-13 | 71.6 |
MS.gene09371.t1 | AT1G13780 | 25.612 | 449 | 276 | 16 | 9 | 443 | 10 | 414 | 4.15e-13 | 71.6 |
MS.gene09371.t1 | AT5G53635 | 27.273 | 473 | 225 | 26 | 11 | 443 | 2 | 395 | 1.02e-12 | 70.1 |
MS.gene09371.t1 | AT1G06630 | 29.464 | 336 | 180 | 15 | 9 | 334 | 12 | 300 | 1.17e-12 | 68.9 |
MS.gene09371.t1 | AT5G15620 | 26.585 | 410 | 221 | 16 | 9 | 397 | 2 | 352 | 1.23e-12 | 70.1 |
MS.gene09371.t1 | AT3G59150 | 29.060 | 351 | 183 | 15 | 9 | 338 | 13 | 318 | 1.36e-12 | 70.1 |
MS.gene09371.t1 | AT1G05080 | 27.152 | 453 | 249 | 15 | 8 | 443 | 12 | 400 | 1.44e-12 | 69.7 |
MS.gene09371.t1 | AT5G18770 | 25.330 | 454 | 263 | 15 | 9 | 443 | 24 | 420 | 1.89e-12 | 69.7 |
MS.gene09371.t1 | AT3G59250 | 26.471 | 340 | 205 | 12 | 124 | 445 | 57 | 369 | 1.95e-12 | 69.3 |
MS.gene09371.t1 | AT5G56820 | 26.836 | 354 | 192 | 13 | 120 | 444 | 66 | 381 | 3.54e-12 | 68.6 |
MS.gene09371.t1 | AT3G56780 | 23.770 | 488 | 244 | 15 | 11 | 439 | 9 | 427 | 7.28e-12 | 67.8 |
MS.gene09371.t1 | AT5G25860 | 26.329 | 395 | 235 | 15 | 9 | 387 | 12 | 366 | 8.34e-12 | 67.4 |
MS.gene09371.t1 | AT2G29930 | 33.061 | 245 | 110 | 15 | 166 | 387 | 15 | 228 | 1.16e-11 | 66.2 |
MS.gene09371.t1 | AT5G60610 | 29.375 | 320 | 183 | 14 | 135 | 439 | 83 | 374 | 1.31e-11 | 66.6 |
MS.gene09371.t1 | AT5G60610 | 29.375 | 320 | 183 | 14 | 135 | 439 | 83 | 374 | 1.31e-11 | 66.6 |
MS.gene09371.t1 | AT3G56780 | 24.051 | 474 | 232 | 15 | 11 | 425 | 9 | 413 | 2.11e-11 | 66.2 |
MS.gene09371.t1 | AT5G22700 | 25.490 | 408 | 209 | 17 | 9 | 386 | 43 | 385 | 2.63e-11 | 65.9 |
MS.gene09371.t1 | AT5G35995 | 24.500 | 400 | 222 | 15 | 8 | 387 | 4 | 343 | 3.22e-11 | 65.5 |
MS.gene09371.t1 | AT5G35995 | 24.500 | 400 | 222 | 15 | 8 | 387 | 4 | 343 | 3.22e-11 | 65.5 |
MS.gene09371.t1 | AT1G66290 | 24.078 | 461 | 258 | 16 | 4 | 443 | 24 | 413 | 4.68e-11 | 65.1 |
MS.gene09371.t1 | AT5G41830 | 23.333 | 390 | 204 | 13 | 130 | 457 | 54 | 410 | 5.15e-11 | 65.1 |
MS.gene09371.t1 | AT3G44810 | 31.646 | 237 | 107 | 11 | 11 | 237 | 9 | 200 | 6.65e-11 | 64.7 |
Find 91 sgRNAs with CRISPR-Local
Find 131 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTGCAAACTCATACTTTCT+AGG | 0.189881 | 4.1:-42055595 | None:intergenic |
CTCGTTACATTTGAATTTAA+AGG | 0.204847 | 4.1:+42056398 | MS.gene09371:CDS |
ACATGTTCTATAACACTCTT+TGG | 0.268393 | 4.1:-42054816 | None:intergenic |
ACTGCAAGATCCTTAAGTTT+TGG | 0.282824 | 4.1:-42055963 | None:intergenic |
TAATTCAATTGAAGATCATT+TGG | 0.291569 | 4.1:+42056919 | MS.gene09371:CDS |
TCACAGTTTGTTATATTTAT+CGG | 0.293701 | 4.1:+42055884 | MS.gene09371:CDS |
TATAACACTCTTTGGTTGAT+AGG | 0.294346 | 4.1:-42054808 | None:intergenic |
GCAGACTGACTCCCATCTTT+TGG | 0.296189 | 4.1:-42054846 | None:intergenic |
AGTTTCCAACCTCCTTTCTT+CGG | 0.314970 | 4.1:-42056328 | None:intergenic |
ACTTAAGGATCTTGCAGTTA+AGG | 0.333977 | 4.1:+42055968 | MS.gene09371:CDS |
GCTTTCCATTTGTAAGCTTC+CGG | 0.343112 | 4.1:+42055642 | MS.gene09371:CDS |
GTTTCCAACCTCCTTTCTTC+GGG | 0.346723 | 4.1:-42056327 | None:intergenic |
TCTATCTGGTTGTCCTCGTC+TGG | 0.383558 | 4.1:+42055402 | MS.gene09371:CDS |
TGTGATGTATTCTATCTTTG+AGG | 0.387279 | 4.1:+42055351 | MS.gene09371:CDS |
CGAAAGCAAGCTGTAAAGAT+AGG | 0.388871 | 4.1:-42054937 | None:intergenic |
AATTCAATTGAAGATCATTT+GGG | 0.401511 | 4.1:+42056920 | MS.gene09371:CDS |
ACAAATCCAGGTCAAGTTCC+TGG | 0.406926 | 4.1:-42055180 | None:intergenic |
ACTCGTGGTCTTAAAATTGC+GGG | 0.408358 | 4.1:+42055252 | MS.gene09371:CDS |
ACTTTCTAATGTCAAATCAT+TGG | 0.410912 | 4.1:+42055696 | MS.gene09371:CDS |
AAGTAGGCATAAATAAATAA+AGG | 0.417351 | 4.1:-42055495 | None:intergenic |
AAAGTGAAGGTTGGGAATCT+TGG | 0.417455 | 4.1:-42054870 | None:intergenic |
GCAGAATGCTCCAAAACTTA+AGG | 0.417940 | 4.1:+42055953 | MS.gene09371:CDS |
GGTAATTGAAAGTGAAGGTT+GGG | 0.443422 | 4.1:-42054878 | None:intergenic |
AGATCATTTGGGTGCCTTCA+AGG | 0.446325 | 4.1:+42056931 | MS.gene09371:CDS |
AAGCCTAGCTCGATCAAGAT+TGG | 0.452512 | 4.1:-42055623 | None:intergenic |
TAGAAAGAACTTCGAGTGAC+GGG | 0.453462 | 4.1:-42055552 | None:intergenic |
ATTTCTTCTTTCGATATCAC+AGG | 0.458999 | 4.1:-42054914 | None:intergenic |
CTAACGTTTGATAGTGAGAA+AGG | 0.464525 | 4.1:+42054986 | MS.gene09371:CDS |
CATGTGTTCTATCCAAAAGA+TGG | 0.467948 | 4.1:+42054834 | MS.gene09371:CDS |
TTTCATGCAGAAACAAATCC+AGG | 0.472087 | 4.1:-42055192 | None:intergenic |
CATCAAGTGGCTGGTATGGC+TGG | 0.480337 | 4.1:-42055012 | None:intergenic |
TCAAATCAATTCCCGAAGAA+AGG | 0.482837 | 4.1:+42056316 | MS.gene09371:CDS |
AAATTCAAATGTAACGAGAC+TGG | 0.485332 | 4.1:-42056393 | None:intergenic |
GGTCTTCACTGAATCCTTGA+AGG | 0.491602 | 4.1:-42056945 | None:intergenic |
GTATACAAATTGTTAAAATC+CGG | 0.494166 | 4.1:-42055661 | None:intergenic |
CAAGGTCCAGGAACTTGACC+TGG | 0.494419 | 4.1:+42055174 | MS.gene09371:CDS |
GGCATTAGATCTCAAGGTCC+AGG | 0.496808 | 4.1:+42055162 | MS.gene09371:CDS |
ATCACAGGGTCTGAAATCTC+TGG | 0.502995 | 4.1:-42054899 | None:intergenic |
TGTACACATGTGGGTTTCAA+AGG | 0.503354 | 4.1:+42055033 | MS.gene09371:CDS |
AAAATCCGGAAGCTTACAAA+TGG | 0.505532 | 4.1:-42055647 | None:intergenic |
GGAGGTTGGAAACTCGAGTT+GGG | 0.509671 | 4.1:+42056337 | MS.gene09371:CDS |
GTGACTCACACGTGGAAAGC+CGG | 0.517166 | 4.1:-42055231 | None:intergenic |
TGTACATCAAGTGGCTGGTA+TGG | 0.523834 | 4.1:-42055016 | None:intergenic |
CACTCGTGGTCTTAAAATTG+CGG | 0.539007 | 4.1:+42055251 | MS.gene09371:CDS |
TGTCCAATCTTGATCGAGCT+AGG | 0.540794 | 4.1:+42055620 | MS.gene09371:CDS |
TTCAAAGGCATTAGATCTCA+AGG | 0.542872 | 4.1:+42055156 | MS.gene09371:CDS |
CAACACGTAATAACAGAAGT+AGG | 0.549259 | 4.1:-42055511 | None:intergenic |
TGGTAATTGAAAGTGAAGGT+TGG | 0.551378 | 4.1:-42054879 | None:intergenic |
TTAACAATTTGTATACACTC+TGG | 0.552358 | 4.1:+42055668 | MS.gene09371:CDS |
AATGTCAAATCATTGGCTCT+CGG | 0.552626 | 4.1:+42055703 | MS.gene09371:CDS |
CCGAAAATATAAGAAAACTT+AGG | 0.553012 | 4.1:+42055086 | MS.gene09371:CDS |
TGTTATGCAGTTTCTCAGCA+TGG | 0.553413 | 4.1:+42055827 | MS.gene09371:intron |
TAAGTGAAAAGAGATGTTGA+TGG | 0.554261 | 4.1:-42055458 | None:intergenic |
AGCCACATGATGTGCACATG+TGG | 0.563390 | 4.1:+42055131 | MS.gene09371:CDS |
ATGTGTTCTATCCAAAAGAT+GGG | 0.563690 | 4.1:+42054835 | MS.gene09371:CDS |
GACGGGGCATTAATTTGTAG+TGG | 0.566180 | 4.1:-42055535 | None:intergenic |
TCAAGACATAGAAACTGAGT+TGG | 0.567178 | 4.1:+42056424 | MS.gene09371:CDS |
CTTAGGCTTCATAGTGACAA+AGG | 0.569497 | 4.1:+42055103 | MS.gene09371:CDS |
AGGAGGTTGGAAACTCGAGT+TGG | 0.571978 | 4.1:+42056336 | MS.gene09371:CDS |
AAGTGAAAAGAGATGTTGAT+GGG | 0.577961 | 4.1:-42055457 | None:intergenic |
ATCTGGTTGTCCTCGTCTGG+AGG | 0.578131 | 4.1:+42055405 | MS.gene09371:CDS |
CGGTAAATATACATGAAAAG+AGG | 0.581610 | 4.1:-42055299 | None:intergenic |
TGTGCACATGTGGGTTTCAA+AGG | 0.585269 | 4.1:+42055141 | MS.gene09371:CDS |
GGTGGAGCCATCAGTGACTC+CGG | 0.588696 | 4.1:+42056358 | MS.gene09371:CDS |
AATTCCCGAAGAAAGGAGGT+TGG | 0.591474 | 4.1:+42056323 | MS.gene09371:CDS |
AAATATCTGAGAGTTGCAGT+TGG | 0.597797 | 4.1:+42055910 | MS.gene09371:CDS |
AATTTGTATACACTCTGGAA+AGG | 0.599787 | 4.1:+42055673 | MS.gene09371:CDS |
AGACTGGTTGTAAGACATGC+CGG | 0.603083 | 4.1:-42056377 | None:intergenic |
GATGTTGATGGGTATTCGAA+AGG | 0.603601 | 4.1:-42055446 | None:intergenic |
AATCAATTCCCGAAGAAAGG+AGG | 0.603702 | 4.1:+42056319 | MS.gene09371:CDS |
ATAGAAAGAACTTCGAGTGA+CGG | 0.607597 | 4.1:-42055553 | None:intergenic |
AGACATGCCGGAGTCACTGA+TGG | 0.608044 | 4.1:-42056365 | None:intergenic |
ACATGTGTACATCAAGTGGC+TGG | 0.611487 | 4.1:-42055021 | None:intergenic |
GCCACTTGATGTACACATGT+GGG | 0.611613 | 4.1:+42055024 | MS.gene09371:CDS |
TGAAAAGAGGAATTGAGTGT+TGG | 0.612345 | 4.1:-42055286 | None:intergenic |
TTTCTTCTTTCGATATCACA+GGG | 0.620763 | 4.1:-42054913 | None:intergenic |
GGTTGGAAACTCGAGTTGGG+TGG | 0.621687 | 4.1:+42056340 | MS.gene09371:CDS |
AGCCACTTGATGTACACATG+TGG | 0.625709 | 4.1:+42055023 | MS.gene09371:CDS |
ACCCACATGTGTACATCAAG+TGG | 0.629333 | 4.1:-42055025 | None:intergenic |
TTCCACGTGTGAGTCACTCG+TGG | 0.631019 | 4.1:+42055237 | MS.gene09371:CDS |
AAAAGAAGTTCCTCCAGACG+AGG | 0.636459 | 4.1:-42055415 | None:intergenic |
ACCCACATGTGCACATCATG+TGG | 0.642533 | 4.1:-42055133 | None:intergenic |
AGATGAAGAATCTTTAGTGA+CGG | 0.652659 | 4.1:-42055319 | None:intergenic |
GCCACATGATGTGCACATGT+GGG | 0.673788 | 4.1:+42055132 | MS.gene09371:CDS |
CTCGTGGTCTTAAAATTGCG+GGG | 0.673910 | 4.1:+42055253 | MS.gene09371:CDS |
AGAAAGAACTTCGAGTGACG+GGG | 0.677033 | 4.1:-42055551 | None:intergenic |
TCACACGTGGAAAGCCGGAG+CGG | 0.680905 | 4.1:-42055226 | None:intergenic |
GACCACGAGTGACTCACACG+TGG | 0.682798 | 4.1:-42055239 | None:intergenic |
TCTCTGGTAATTGAAAGTGA+AGG | 0.696256 | 4.1:-42054883 | None:intergenic |
ACTAGATTAAAAGTGTCGAG+TGG | 0.699429 | 4.1:-42056966 | None:intergenic |
TATGCAGTTTCTCAGCATGG+AGG | 0.703511 | 4.1:+42055830 | MS.gene09371:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATAAAATAGTTTAAAAGA+AGG | - | chr4.1:42056194-42056213 | None:intergenic | 10.0% |
!!! | AAAATTCTAATGATAATTTT+TGG | + | chr4.1:42056274-42056293 | MS.gene09371:intron | 10.0% |
!!! | GAATTAATTAATTTGTTTAT+CGG | - | chr4.1:42056120-42056139 | None:intergenic | 10.0% |
!!! | TATTTTTTAATGAAAAAAGT+TGG | + | chr4.1:42056627-42056646 | MS.gene09371:intron | 10.0% |
!! | AAATATAATAATCTCAAATC+TGG | + | chr4.1:42056043-42056062 | MS.gene09371:intron | 15.0% |
!! | TAAAGTATATAAACTTTGTA+TGG | - | chr4.1:42056609-42056628 | None:intergenic | 15.0% |
!! | TGATATATTGTAAATAGTTT+CGG | - | chr4.1:42056249-42056268 | None:intergenic | 15.0% |
!!! | TCTAATGATTTTATCATTTA+TGG | + | chr4.1:42056853-42056872 | MS.gene09371:intron | 15.0% |
!! | AAGTAGGCATAAATAAATAA+AGG | - | chr4.1:42055498-42055517 | None:intergenic | 20.0% |
!! | AATTCAATTGAAGATCATTT+GGG | + | chr4.1:42056920-42056939 | MS.gene09371:CDS | 20.0% |
!! | GTATACAAATTGTTAAAATC+CGG | - | chr4.1:42055664-42055683 | None:intergenic | 20.0% |
!! | TAATTCAATTGAAGATCATT+TGG | + | chr4.1:42056919-42056938 | MS.gene09371:CDS | 20.0% |
!! | TGTATATACTATTACATTCT+TGG | + | chr4.1:42056762-42056781 | MS.gene09371:intron | 20.0% |
!!! | AATTATTCAATATTTGCTAC+AGG | + | chr4.1:42056892-42056911 | MS.gene09371:intron | 20.0% |
!!! | CCTAAGTTTTCTTATATTTT+CGG | - | chr4.1:42055089-42055108 | None:intergenic | 20.0% |
!!! | TCACAGTTTGTTATATTTAT+CGG | + | chr4.1:42055884-42055903 | MS.gene09371:CDS | 20.0% |
! | ACTTTCTAATGTCAAATCAT+TGG | + | chr4.1:42055696-42055715 | MS.gene09371:CDS | 25.0% |
! | ATACTATTACATTCTTGGTT+GGG | + | chr4.1:42056767-42056786 | MS.gene09371:intron | 25.0% |
! | CCGAAAATATAAGAAAACTT+AGG | + | chr4.1:42055086-42055105 | MS.gene09371:CDS | 25.0% |
! | CTCGTTACATTTGAATTTAA+AGG | + | chr4.1:42056398-42056417 | MS.gene09371:CDS | 25.0% |
! | TAAAAGAAGGTCAAATTGAT+AGG | - | chr4.1:42056181-42056200 | None:intergenic | 25.0% |
! | TATACTATTACATTCTTGGT+TGG | + | chr4.1:42056766-42056785 | MS.gene09371:intron | 25.0% |
! | TTAACAATTTGTATACACTC+TGG | + | chr4.1:42055668-42055687 | MS.gene09371:CDS | 25.0% |
!! | ACTCTTCTTTTCTTTAAACT+GGG | - | chr4.1:42056509-42056528 | None:intergenic | 25.0% |
!! | TACTCTTCTTTTCTTTAAAC+TGG | - | chr4.1:42056510-42056529 | None:intergenic | 25.0% |
AAATTCAAATGTAACGAGAC+TGG | - | chr4.1:42056396-42056415 | None:intergenic | 30.0% | |
AAGACTAAGCAAAAGATACA+TGG | + | chr4.1:42056079-42056098 | MS.gene09371:intron | 30.0% | |
AAGTGAAAAGAGATGTTGAT+GGG | - | chr4.1:42055460-42055479 | None:intergenic | 30.0% | |
AATGAGAATAGAATTGCATC+TGG | - | chr4.1:42055798-42055817 | None:intergenic | 30.0% | |
ACATGTTCTATAACACTCTT+TGG | - | chr4.1:42054819-42054838 | None:intergenic | 30.0% | |
AGATGAAGAATCTTTAGTGA+CGG | - | chr4.1:42055322-42055341 | None:intergenic | 30.0% | |
ATGAGAATAGAATTGCATCT+GGG | - | chr4.1:42055797-42055816 | None:intergenic | 30.0% | |
ATGTGTTCTATCCAAAAGAT+GGG | + | chr4.1:42054835-42054854 | MS.gene09371:CDS | 30.0% | |
ATTTCTTCTTTCGATATCAC+AGG | - | chr4.1:42054917-42054936 | None:intergenic | 30.0% | |
CGGTAAATATACATGAAAAG+AGG | - | chr4.1:42055302-42055321 | None:intergenic | 30.0% | |
GAGATATAAAGTTGTGTTGA+CGG | - | chr4.1:42056735-42056754 | None:intergenic | 30.0% | |
GTTGGCATGTTAATATTTGT+TGG | + | chr4.1:42056645-42056664 | MS.gene09371:intron | 30.0% | |
TAAGTGAAAAGAGATGTTGA+TGG | - | chr4.1:42055461-42055480 | None:intergenic | 30.0% | |
TATAACACTCTTTGGTTGAT+AGG | - | chr4.1:42054811-42054830 | None:intergenic | 30.0% | |
TGTGATGTATTCTATCTTTG+AGG | + | chr4.1:42055351-42055370 | MS.gene09371:CDS | 30.0% | |
TTTCTTCTTTCGATATCACA+GGG | - | chr4.1:42054916-42054935 | None:intergenic | 30.0% | |
! | AATGTCTAGAACAATAAGAG+AGG | - | chr4.1:42056704-42056723 | None:intergenic | 30.0% |
! | AATTTGTATACACTCTGGAA+AGG | + | chr4.1:42055673-42055692 | MS.gene09371:CDS | 30.0% |
! | ATTTGTTGGTATGATGTTGT+GGG | + | chr4.1:42056659-42056678 | MS.gene09371:intron | 30.0% |
! | GATCTCAATACTTTTCTATC+TGG | + | chr4.1:42055388-42055407 | MS.gene09371:CDS | 30.0% |
! | TATTTGTTGGTATGATGTTG+TGG | + | chr4.1:42056658-42056677 | MS.gene09371:intron | 30.0% |
AAAAAATCTTATTGCCGCTC+CGG | + | chr4.1:42055212-42055231 | MS.gene09371:CDS | 35.0% | |
AAAATCCGGAAGCTTACAAA+TGG | - | chr4.1:42055650-42055669 | None:intergenic | 35.0% | |
AAATATCTGAGAGTTGCAGT+TGG | + | chr4.1:42055910-42055929 | MS.gene09371:CDS | 35.0% | |
ACTTAAGGATCTTGCAGTTA+AGG | + | chr4.1:42055968-42055987 | MS.gene09371:CDS | 35.0% | |
AGTAGAAAAAAGTTTGCGCA+AGG | + | chr4.1:42056526-42056545 | MS.gene09371:intron | 35.0% | |
ATAGAAAGAACTTCGAGTGA+CGG | - | chr4.1:42055556-42055575 | None:intergenic | 35.0% | |
CAACACGTAATAACAGAAGT+AGG | - | chr4.1:42055514-42055533 | None:intergenic | 35.0% | |
CATGTGTTCTATCCAAAAGA+TGG | + | chr4.1:42054834-42054853 | MS.gene09371:CDS | 35.0% | |
CTTGCAAACTCATACTTTCT+AGG | - | chr4.1:42055598-42055617 | None:intergenic | 35.0% | |
GGTAATTGAAAGTGAAGGTT+GGG | - | chr4.1:42054881-42054900 | None:intergenic | 35.0% | |
GTAGAAAAAAGTTTGCGCAA+GGG | + | chr4.1:42056527-42056546 | MS.gene09371:intron | 35.0% | |
TAGAAAAAAGTTTGCGCAAG+GGG | + | chr4.1:42056528-42056547 | MS.gene09371:intron | 35.0% | |
TCAAATCAATTCCCGAAGAA+AGG | + | chr4.1:42056316-42056335 | MS.gene09371:CDS | 35.0% | |
TCAAGACATAGAAACTGAGT+TGG | + | chr4.1:42056424-42056443 | MS.gene09371:CDS | 35.0% | |
TCACTCAAGTAAGTTAGAGA+AGG | + | chr4.1:42056469-42056488 | MS.gene09371:intron | 35.0% | |
TCTCTGGTAATTGAAAGTGA+AGG | - | chr4.1:42054886-42054905 | None:intergenic | 35.0% | |
TGAAAAGAGGAATTGAGTGT+TGG | - | chr4.1:42055289-42055308 | None:intergenic | 35.0% | |
TGGTAATTGAAAGTGAAGGT+TGG | - | chr4.1:42054882-42054901 | None:intergenic | 35.0% | |
TGTAAACTTCATACCCATAC+TGG | - | chr4.1:42056572-42056591 | None:intergenic | 35.0% | |
TTTCATGCAGAAACAAATCC+AGG | - | chr4.1:42055195-42055214 | None:intergenic | 35.0% | |
TTTGTTGGTATGATGTTGTG+GGG | + | chr4.1:42056660-42056679 | MS.gene09371:intron | 35.0% | |
! | ACTGCAAGATCCTTAAGTTT+TGG | - | chr4.1:42055966-42055985 | None:intergenic | 35.0% |
! | TATAAAGTTGTGTTGACGGT+CGG | - | chr4.1:42056731-42056750 | None:intergenic | 35.0% |
!! | AATGTCAAATCATTGGCTCT+CGG | + | chr4.1:42055703-42055722 | MS.gene09371:CDS | 35.0% |
!! | CTAACGTTTGATAGTGAGAA+AGG | + | chr4.1:42054986-42055005 | MS.gene09371:CDS | 35.0% |
!! | TTATATTTTCGGTGCGTCTT+AGG | - | chr4.1:42055078-42055097 | None:intergenic | 35.0% |
!! | TTCAAAGGCATTAGATCTCA+AGG | + | chr4.1:42055156-42055175 | MS.gene09371:CDS | 35.0% |
AAAGTGAAGGTTGGGAATCT+TGG | - | chr4.1:42054873-42054892 | None:intergenic | 40.0% | |
AATCAATTCCCGAAGAAAGG+AGG | + | chr4.1:42056319-42056338 | MS.gene09371:CDS | 40.0% | |
ACTTCATACCCATACTGGTA+CGG | - | chr4.1:42056567-42056586 | None:intergenic | 40.0% | |
AGTTTCCAACCTCCTTTCTT+CGG | - | chr4.1:42056331-42056350 | None:intergenic | 40.0% | |
CGAAAGCAAGCTGTAAAGAT+AGG | - | chr4.1:42054940-42054959 | None:intergenic | 40.0% | |
CTTAGGCTTCATAGTGACAA+AGG | + | chr4.1:42055103-42055122 | MS.gene09371:CDS | 40.0% | |
GCAGAATGCTCCAAAACTTA+AGG | + | chr4.1:42055953-42055972 | MS.gene09371:CDS | 40.0% | |
GCTTTCCATTTGTAAGCTTC+CGG | + | chr4.1:42055642-42055661 | MS.gene09371:CDS | 40.0% | |
TAGAAAGAACTTCGAGTGAC+GGG | - | chr4.1:42055555-42055574 | None:intergenic | 40.0% | |
TGCATCTGGGTGACTAAATA+TGG | - | chr4.1:42055784-42055803 | None:intergenic | 40.0% | |
TGTACACATGTGGGTTTCAA+AGG | + | chr4.1:42055033-42055052 | MS.gene09371:CDS | 40.0% | |
TGTTATGCAGTTTCTCAGCA+TGG | + | chr4.1:42055827-42055846 | MS.gene09371:intron | 40.0% | |
! | ACTCGTGGTCTTAAAATTGC+GGG | + | chr4.1:42055252-42055271 | MS.gene09371:CDS | 40.0% |
! | CACTCGTGGTCTTAAAATTG+CGG | + | chr4.1:42055251-42055270 | MS.gene09371:CDS | 40.0% |
! | GATGTTGATGGGTATTCGAA+AGG | - | chr4.1:42055449-42055468 | None:intergenic | 40.0% |
AAAAGAAGTTCCTCCAGACG+AGG | - | chr4.1:42055418-42055437 | None:intergenic | 45.0% | |
AAGCCTAGCTCGATCAAGAT+TGG | - | chr4.1:42055626-42055645 | None:intergenic | 45.0% | |
AATTCCCGAAGAAAGGAGGT+TGG | + | chr4.1:42056323-42056342 | MS.gene09371:CDS | 45.0% | |
ACAAATCCAGGTCAAGTTCC+TGG | - | chr4.1:42055183-42055202 | None:intergenic | 45.0% | |
ACATGTGTACATCAAGTGGC+TGG | - | chr4.1:42055024-42055043 | None:intergenic | 45.0% | |
ACCCACATGTGTACATCAAG+TGG | - | chr4.1:42055028-42055047 | None:intergenic | 45.0% | |
AGAAAGAACTTCGAGTGACG+GGG | - | chr4.1:42055554-42055573 | None:intergenic | 45.0% | |
AGAAATCCTCCGTACCAGTA+TGG | + | chr4.1:42056555-42056574 | MS.gene09371:intron | 45.0% | |
AGATCATTTGGGTGCCTTCA+AGG | + | chr4.1:42056931-42056950 | MS.gene09371:CDS | 45.0% | |
AGCCACTTGATGTACACATG+TGG | + | chr4.1:42055023-42055042 | MS.gene09371:CDS | 45.0% | |
GAAATCCTCCGTACCAGTAT+GGG | + | chr4.1:42056556-42056575 | MS.gene09371:intron | 45.0% | |
GCCACTTGATGTACACATGT+GGG | + | chr4.1:42055024-42055043 | MS.gene09371:CDS | 45.0% | |
GGTCTTCACTGAATCCTTGA+AGG | - | chr4.1:42056948-42056967 | None:intergenic | 45.0% | |
GTTTCCAACCTCCTTTCTTC+GGG | - | chr4.1:42056330-42056349 | None:intergenic | 45.0% | |
TATGCAGTTTCTCAGCATGG+AGG | + | chr4.1:42055830-42055849 | MS.gene09371:intron | 45.0% | |
TGTACATCAAGTGGCTGGTA+TGG | - | chr4.1:42055019-42055038 | None:intergenic | 45.0% | |
TGTCCAATCTTGATCGAGCT+AGG | + | chr4.1:42055620-42055639 | MS.gene09371:CDS | 45.0% | |
TGTGCACATGTGGGTTTCAA+AGG | + | chr4.1:42055141-42055160 | MS.gene09371:CDS | 45.0% | |
! | AGACTGGTTGTAAGACATGC+CGG | - | chr4.1:42056380-42056399 | None:intergenic | 45.0% |
! | ATCACAGGGTCTGAAATCTC+TGG | - | chr4.1:42054902-42054921 | None:intergenic | 45.0% |
! | CTCGTGGTCTTAAAATTGCG+GGG | + | chr4.1:42055253-42055272 | MS.gene09371:CDS | 45.0% |
!! | GACGGGGCATTAATTTGTAG+TGG | - | chr4.1:42055538-42055557 | None:intergenic | 45.0% |
!!! | AATATTGAATAATTAATTTT+TGG | - | chr4.1:42056886-42056905 | None:intergenic | 5.0% |
ACCCACATGTGCACATCATG+TGG | - | chr4.1:42055136-42055155 | None:intergenic | 50.0% | |
AGCCACATGATGTGCACATG+TGG | + | chr4.1:42055131-42055150 | MS.gene09371:CDS | 50.0% | |
AGGAGGTTGGAAACTCGAGT+TGG | + | chr4.1:42056336-42056355 | MS.gene09371:CDS | 50.0% | |
GCCACATGATGTGCACATGT+GGG | + | chr4.1:42055132-42055151 | MS.gene09371:CDS | 50.0% | |
GGAGGTTGGAAACTCGAGTT+GGG | + | chr4.1:42056337-42056356 | MS.gene09371:CDS | 50.0% | |
GGCATTAGATCTCAAGGTCC+AGG | + | chr4.1:42055162-42055181 | MS.gene09371:CDS | 50.0% | |
GTTGGTATGATGTTGTGGGG+TGG | + | chr4.1:42056663-42056682 | MS.gene09371:intron | 50.0% | |
TCATACCCATACTGGTACGG+AGG | - | chr4.1:42056564-42056583 | None:intergenic | 50.0% | |
TCTATCTGGTTGTCCTCGTC+TGG | + | chr4.1:42055402-42055421 | MS.gene09371:CDS | 50.0% | |
!! | GCAGACTGACTCCCATCTTT+TGG | - | chr4.1:42054849-42054868 | None:intergenic | 50.0% |
AGACATGCCGGAGTCACTGA+TGG | - | chr4.1:42056368-42056387 | None:intergenic | 55.0% | |
ATCTGGTTGTCCTCGTCTGG+AGG | + | chr4.1:42055405-42055424 | MS.gene09371:CDS | 55.0% | |
CAAGGTCCAGGAACTTGACC+TGG | + | chr4.1:42055174-42055193 | MS.gene09371:CDS | 55.0% | |
CATCAAGTGGCTGGTATGGC+TGG | - | chr4.1:42055015-42055034 | None:intergenic | 55.0% | |
GTGACTCACACGTGGAAAGC+CGG | - | chr4.1:42055234-42055253 | None:intergenic | 55.0% | |
TTCCACGTGTGAGTCACTCG+TGG | + | chr4.1:42055237-42055256 | MS.gene09371:CDS | 55.0% | |
!! | GGTTGGAAACTCGAGTTGGG+TGG | + | chr4.1:42056340-42056359 | MS.gene09371:CDS | 55.0% |
GACCACGAGTGACTCACACG+TGG | - | chr4.1:42055242-42055261 | None:intergenic | 60.0% | |
GGTGGAGCCATCAGTGACTC+CGG | + | chr4.1:42056358-42056377 | MS.gene09371:CDS | 60.0% | |
TCACACGTGGAAAGCCGGAG+CGG | - | chr4.1:42055229-42055248 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 42054734 | 42056982 | 42054734 | ID=MS.gene09371 |
chr4.1 | mRNA | 42054734 | 42056982 | 42054734 | ID=MS.gene09371.t1;Parent=MS.gene09371 |
chr4.1 | exon | 42054734 | 42055741 | 42054734 | ID=MS.gene09371.t1.exon1;Parent=MS.gene09371.t1 |
chr4.1 | CDS | 42054734 | 42055741 | 42054734 | ID=cds.MS.gene09371.t1;Parent=MS.gene09371.t1 |
chr4.1 | exon | 42055837 | 42055989 | 42055837 | ID=MS.gene09371.t1.exon2;Parent=MS.gene09371.t1 |
chr4.1 | CDS | 42055837 | 42055989 | 42055837 | ID=cds.MS.gene09371.t1;Parent=MS.gene09371.t1 |
chr4.1 | exon | 42056308 | 42056463 | 42056308 | ID=MS.gene09371.t1.exon3;Parent=MS.gene09371.t1 |
chr4.1 | CDS | 42056308 | 42056463 | 42056308 | ID=cds.MS.gene09371.t1;Parent=MS.gene09371.t1 |
chr4.1 | exon | 42056914 | 42056982 | 42056914 | ID=MS.gene09371.t1.exon4;Parent=MS.gene09371.t1 |
chr4.1 | CDS | 42056914 | 42056982 | 42056914 | ID=cds.MS.gene09371.t1;Parent=MS.gene09371.t1 |
Gene Sequence |
Protein sequence |