Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89955.t1 | AES88476.2 | 85.1 | 496 | 73 | 1 | 25 | 520 | 91 | 585 | 7.50E-213 | 750 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89955.t1 | Q3EAE5 | 25.4 | 480 | 272 | 17 | 34 | 486 | 2 | 422 | 1.3e-19 | 99.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89955.t1 | G7JM43 | 85.1 | 496 | 73 | 1 | 25 | 520 | 91 | 585 | 5.4e-213 | 750.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89955.t1 | MTR_4g055580 | 84.476 | 496 | 76 | 1 | 25 | 520 | 91 | 585 | 0.0 | 819 |
MS.gene89955.t1 | MTR_4g055990 | 80.962 | 499 | 89 | 2 | 26 | 518 | 1 | 499 | 0.0 | 788 |
MS.gene89955.t1 | MTR_4g055990 | 81.837 | 479 | 81 | 2 | 26 | 498 | 1 | 479 | 0.0 | 762 |
MS.gene89955.t1 | MTR_4g056040 | 78.270 | 474 | 95 | 3 | 26 | 498 | 1 | 467 | 0.0 | 733 |
MS.gene89955.t1 | MTR_4g056030 | 77.254 | 488 | 73 | 3 | 26 | 512 | 1 | 451 | 0.0 | 733 |
MS.gene89955.t1 | MTR_4g056020 | 75.506 | 494 | 83 | 3 | 26 | 518 | 1 | 457 | 0.0 | 725 |
MS.gene89955.t1 | MTR_4g056070 | 79.634 | 437 | 85 | 2 | 26 | 458 | 1 | 437 | 0.0 | 691 |
MS.gene89955.t1 | MTR_1g038710 | 61.963 | 489 | 140 | 5 | 22 | 503 | 7 | 456 | 0.0 | 542 |
MS.gene89955.t1 | MTR_1g090883 | 57.436 | 390 | 124 | 6 | 27 | 413 | 12 | 362 | 2.73e-128 | 379 |
MS.gene89955.t1 | MTR_7g110920 | 55.307 | 358 | 102 | 5 | 161 | 498 | 1 | 320 | 4.90e-119 | 353 |
MS.gene89955.t1 | MTR_4g056020 | 77.640 | 161 | 36 | 0 | 358 | 518 | 1 | 161 | 6.30e-84 | 257 |
MS.gene89955.t1 | MTR_4g093690 | 45.659 | 311 | 122 | 7 | 24 | 329 | 8 | 276 | 8.96e-67 | 217 |
MS.gene89955.t1 | MTR_4g056010 | 92.000 | 100 | 8 | 0 | 130 | 229 | 1 | 100 | 1.46e-56 | 184 |
MS.gene89955.t1 | MTR_1g090900 | 52.804 | 214 | 61 | 4 | 26 | 236 | 1 | 177 | 1.71e-53 | 179 |
MS.gene89955.t1 | MTR_1g090890 | 59.341 | 91 | 31 | 2 | 411 | 498 | 29 | 116 | 1.48e-28 | 110 |
MS.gene89955.t1 | MTR_8g014260 | 27.766 | 479 | 252 | 15 | 31 | 480 | 13 | 426 | 1.51e-26 | 112 |
MS.gene89955.t1 | MTR_5g080710 | 28.884 | 457 | 248 | 14 | 34 | 477 | 33 | 425 | 1.65e-25 | 109 |
MS.gene89955.t1 | MTR_5g084070 | 27.495 | 491 | 266 | 16 | 30 | 500 | 9 | 429 | 2.50e-25 | 108 |
MS.gene89955.t1 | MTR_4g032730 | 28.723 | 470 | 240 | 21 | 34 | 464 | 15 | 428 | 1.13e-23 | 104 |
MS.gene89955.t1 | MTR_8g062270 | 28.859 | 447 | 256 | 18 | 34 | 464 | 16 | 416 | 3.40e-23 | 102 |
MS.gene89955.t1 | MTR_8g445780 | 27.191 | 445 | 237 | 15 | 32 | 456 | 11 | 388 | 3.01e-21 | 96.3 |
MS.gene89955.t1 | MTR_8g468810 | 28.348 | 448 | 252 | 17 | 34 | 464 | 25 | 420 | 7.44e-21 | 95.9 |
MS.gene89955.t1 | MTR_8g058970 | 26.514 | 479 | 265 | 19 | 30 | 472 | 15 | 442 | 6.11e-19 | 90.1 |
MS.gene89955.t1 | MTR_8g467800 | 26.694 | 487 | 274 | 15 | 30 | 490 | 16 | 445 | 6.33e-19 | 89.7 |
MS.gene89955.t1 | MTR_2g083840 | 28.509 | 456 | 239 | 20 | 34 | 464 | 21 | 414 | 8.64e-19 | 89.4 |
MS.gene89955.t1 | MTR_8g468810 | 29.846 | 325 | 177 | 10 | 34 | 349 | 25 | 307 | 6.12e-18 | 85.5 |
MS.gene89955.t1 | MTR_8g468810 | 29.846 | 325 | 177 | 10 | 34 | 349 | 25 | 307 | 6.44e-18 | 85.1 |
MS.gene89955.t1 | MTR_3g108560 | 28.764 | 445 | 209 | 20 | 31 | 472 | 17 | 356 | 1.12e-17 | 85.5 |
MS.gene89955.t1 | MTR_8g468810 | 29.664 | 327 | 179 | 10 | 34 | 351 | 25 | 309 | 1.37e-17 | 84.7 |
MS.gene89955.t1 | MTR_8g468810 | 29.846 | 325 | 177 | 10 | 34 | 349 | 25 | 307 | 2.40e-17 | 84.3 |
MS.gene89955.t1 | MTR_2g007400 | 25.657 | 495 | 240 | 22 | 34 | 502 | 12 | 404 | 3.57e-17 | 84.0 |
MS.gene89955.t1 | MTR_8g468840 | 26.374 | 455 | 273 | 17 | 33 | 472 | 13 | 420 | 3.74e-17 | 84.3 |
MS.gene89955.t1 | MTR_3g082890 | 26.154 | 455 | 229 | 19 | 31 | 472 | 94 | 454 | 1.28e-16 | 82.8 |
MS.gene89955.t1 | MTR_1g041245 | 31.278 | 227 | 105 | 7 | 34 | 255 | 11 | 191 | 3.11e-16 | 80.9 |
MS.gene89955.t1 | MTR_8g014160 | 29.143 | 350 | 174 | 13 | 30 | 355 | 37 | 336 | 1.09e-14 | 76.6 |
MS.gene89955.t1 | MTR_3g048290 | 25.212 | 472 | 290 | 16 | 30 | 484 | 19 | 444 | 1.24e-14 | 76.6 |
MS.gene89955.t1 | MTR_4g080773 | 27.079 | 469 | 283 | 19 | 34 | 484 | 19 | 446 | 7.64e-14 | 74.3 |
MS.gene89955.t1 | MTR_4g080773 | 26.962 | 497 | 286 | 21 | 34 | 512 | 19 | 456 | 1.01e-13 | 73.9 |
MS.gene89955.t1 | MTR_4g080787 | 26.483 | 472 | 279 | 22 | 34 | 484 | 19 | 443 | 1.24e-13 | 73.6 |
MS.gene89955.t1 | MTR_5g092960 | 26.514 | 479 | 276 | 22 | 30 | 483 | 15 | 442 | 5.19e-13 | 71.6 |
MS.gene89955.t1 | MTR_7g034115 | 31.739 | 230 | 100 | 8 | 34 | 255 | 11 | 191 | 5.21e-13 | 71.2 |
MS.gene89955.t1 | MTR_3g109982 | 24.905 | 526 | 284 | 18 | 34 | 507 | 13 | 479 | 7.33e-13 | 71.6 |
MS.gene89955.t1 | MTR_2g005990 | 28.755 | 233 | 123 | 9 | 34 | 258 | 6 | 203 | 2.37e-12 | 68.9 |
MS.gene89955.t1 | MTR_1g014450 | 22.086 | 489 | 286 | 13 | 30 | 496 | 12 | 427 | 4.59e-12 | 68.6 |
MS.gene89955.t1 | MTR_7g033945 | 30.198 | 202 | 94 | 5 | 34 | 227 | 11 | 173 | 5.83e-12 | 64.7 |
MS.gene89955.t1 | MTR_3g082890 | 24.286 | 490 | 231 | 19 | 31 | 472 | 14 | 411 | 7.04e-12 | 67.8 |
MS.gene89955.t1 | MTR_8g467800 | 27.907 | 344 | 178 | 10 | 30 | 355 | 16 | 307 | 1.64e-11 | 66.2 |
MS.gene89955.t1 | MTR_2g094750 | 26.895 | 409 | 253 | 18 | 36 | 422 | 92 | 476 | 2.17e-11 | 66.6 |
MS.gene89955.t1 | MTR_7g110910 | 55.932 | 59 | 26 | 0 | 5 | 63 | 137 | 195 | 2.93e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89955.t1 | AT4G10400 | 26.834 | 477 | 257 | 15 | 34 | 494 | 2 | 402 | 2.38e-24 | 105 |
MS.gene89955.t1 | AT4G10400 | 26.834 | 477 | 257 | 15 | 34 | 494 | 2 | 402 | 2.38e-24 | 105 |
MS.gene89955.t1 | AT4G10400 | 26.834 | 477 | 257 | 15 | 34 | 494 | 2 | 402 | 2.38e-24 | 105 |
MS.gene89955.t1 | AT2G26860 | 28.889 | 450 | 254 | 17 | 34 | 472 | 2 | 396 | 9.67e-24 | 103 |
MS.gene89955.t1 | AT2G26860 | 28.889 | 450 | 254 | 17 | 34 | 472 | 2 | 396 | 9.67e-24 | 103 |
MS.gene89955.t1 | AT4G26340 | 26.316 | 456 | 258 | 18 | 34 | 477 | 2 | 391 | 3.35e-23 | 102 |
MS.gene89955.t1 | AT1G55660 | 27.253 | 466 | 263 | 19 | 34 | 477 | 53 | 464 | 4.11e-23 | 102 |
MS.gene89955.t1 | AT4G00315 | 26.971 | 482 | 262 | 21 | 34 | 486 | 2 | 422 | 8.61e-23 | 101 |
MS.gene89955.t1 | AT3G59190 | 27.543 | 403 | 214 | 11 | 34 | 405 | 12 | 367 | 9.14e-23 | 100 |
MS.gene89955.t1 | AT5G56380 | 25.446 | 448 | 257 | 12 | 34 | 460 | 2 | 393 | 1.32e-22 | 100 |
MS.gene89955.t1 | AT5G56380 | 25.446 | 448 | 257 | 12 | 34 | 460 | 2 | 393 | 1.32e-22 | 100 |
MS.gene89955.t1 | AT3G59190 | 27.543 | 403 | 214 | 11 | 34 | 405 | 12 | 367 | 2.93e-22 | 100 |
MS.gene89955.t1 | AT5G38590 | 26.116 | 448 | 260 | 12 | 34 | 474 | 2 | 385 | 3.78e-22 | 99.4 |
MS.gene89955.t1 | AT3G50710 | 26.824 | 466 | 266 | 15 | 34 | 485 | 2 | 406 | 6.89e-22 | 98.6 |
MS.gene89955.t1 | AT5G62970 | 29.540 | 457 | 262 | 21 | 34 | 472 | 2 | 416 | 8.95e-22 | 98.6 |
MS.gene89955.t1 | AT4G14103 | 28.788 | 396 | 207 | 15 | 34 | 405 | 8 | 352 | 1.18e-21 | 97.4 |
MS.gene89955.t1 | AT4G14103 | 28.788 | 396 | 207 | 15 | 34 | 405 | 8 | 352 | 1.18e-21 | 97.4 |
MS.gene89955.t1 | AT5G60610 | 27.494 | 451 | 233 | 21 | 34 | 464 | 2 | 378 | 1.53e-21 | 97.1 |
MS.gene89955.t1 | AT5G60610 | 27.494 | 451 | 233 | 21 | 34 | 464 | 2 | 378 | 1.53e-21 | 97.1 |
MS.gene89955.t1 | AT4G14103 | 28.788 | 396 | 207 | 15 | 34 | 405 | 8 | 352 | 1.80e-21 | 97.4 |
MS.gene89955.t1 | AT4G00320 | 27.381 | 420 | 241 | 12 | 28 | 422 | 7 | 387 | 4.72e-21 | 96.7 |
MS.gene89955.t1 | AT1G51370 | 28.381 | 451 | 250 | 16 | 32 | 472 | 17 | 404 | 5.84e-21 | 95.9 |
MS.gene89955.t1 | AT5G41830 | 25.355 | 493 | 280 | 15 | 28 | 473 | 7 | 458 | 6.75e-21 | 96.3 |
MS.gene89955.t1 | AT3G59170 | 28.851 | 409 | 227 | 13 | 34 | 406 | 7 | 387 | 8.44e-21 | 95.9 |
MS.gene89955.t1 | AT3G59230 | 26.210 | 496 | 280 | 14 | 34 | 492 | 12 | 458 | 2.41e-20 | 94.4 |
MS.gene89955.t1 | AT4G13960 | 27.250 | 400 | 214 | 11 | 34 | 407 | 2 | 350 | 1.30e-19 | 92.0 |
MS.gene89955.t1 | AT4G13960 | 27.250 | 400 | 214 | 11 | 34 | 407 | 2 | 350 | 1.30e-19 | 92.0 |
MS.gene89955.t1 | AT5G38396 | 27.295 | 403 | 217 | 14 | 34 | 407 | 2 | 357 | 1.75e-19 | 91.7 |
MS.gene89955.t1 | AT3G58860 | 26.410 | 390 | 226 | 11 | 31 | 408 | 4 | 344 | 2.00e-19 | 91.3 |
MS.gene89955.t1 | AT5G56440 | 25.652 | 460 | 257 | 16 | 34 | 472 | 2 | 397 | 2.43e-19 | 90.9 |
MS.gene89955.t1 | AT5G56370 | 27.097 | 465 | 265 | 17 | 34 | 491 | 2 | 399 | 2.57e-19 | 90.9 |
MS.gene89955.t1 | AT5G56370 | 27.097 | 465 | 265 | 17 | 34 | 491 | 2 | 399 | 2.57e-19 | 90.9 |
MS.gene89955.t1 | AT4G14096 | 27.525 | 396 | 207 | 13 | 33 | 405 | 7 | 345 | 2.74e-19 | 91.3 |
MS.gene89955.t1 | AT4G14096 | 27.525 | 396 | 207 | 13 | 33 | 405 | 7 | 345 | 2.74e-19 | 91.3 |
MS.gene89955.t1 | AT3G58920 | 26.650 | 409 | 220 | 14 | 34 | 407 | 2 | 365 | 3.69e-19 | 90.9 |
MS.gene89955.t1 | AT5G56400 | 26.856 | 458 | 246 | 19 | 34 | 472 | 33 | 420 | 5.02e-19 | 90.1 |
MS.gene89955.t1 | AT3G59200 | 26.033 | 484 | 258 | 19 | 33 | 473 | 6 | 432 | 6.35e-19 | 90.1 |
MS.gene89955.t1 | AT5G56820 | 26.190 | 462 | 263 | 17 | 34 | 487 | 15 | 406 | 1.91e-18 | 88.2 |
MS.gene89955.t1 | AT5G53840 | 26.350 | 463 | 247 | 18 | 32 | 472 | 16 | 406 | 2.11e-18 | 88.2 |
MS.gene89955.t1 | AT1G16930 | 25.470 | 479 | 245 | 18 | 34 | 484 | 15 | 409 | 2.83e-18 | 87.8 |
MS.gene89955.t1 | AT1G16930 | 25.470 | 479 | 245 | 18 | 34 | 484 | 15 | 409 | 2.83e-18 | 87.8 |
MS.gene89955.t1 | AT1G16930 | 25.470 | 479 | 245 | 18 | 34 | 484 | 15 | 409 | 2.83e-18 | 87.8 |
MS.gene89955.t1 | AT1G58310 | 27.586 | 406 | 233 | 12 | 29 | 406 | 3 | 375 | 8.64e-18 | 86.7 |
MS.gene89955.t1 | AT4G26350 | 23.593 | 462 | 272 | 13 | 34 | 477 | 2 | 400 | 1.15e-17 | 85.9 |
MS.gene89955.t1 | AT3G59160 | 25.059 | 427 | 247 | 10 | 34 | 421 | 13 | 405 | 1.45e-17 | 85.9 |
MS.gene89955.t1 | AT5G22670 | 26.623 | 462 | 250 | 18 | 33 | 469 | 10 | 407 | 1.47e-17 | 85.5 |
MS.gene89955.t1 | AT1G51370 | 29.017 | 417 | 224 | 15 | 32 | 439 | 17 | 370 | 1.81e-17 | 85.1 |
MS.gene89955.t1 | AT5G22700 | 26.349 | 482 | 239 | 18 | 16 | 461 | 25 | 426 | 2.44e-17 | 85.1 |
MS.gene89955.t1 | AT1G69630 | 25.979 | 485 | 266 | 19 | 24 | 480 | 8 | 427 | 3.60e-17 | 84.3 |
MS.gene89955.t1 | AT5G56700 | 29.799 | 349 | 209 | 14 | 137 | 474 | 29 | 352 | 4.53e-17 | 83.2 |
MS.gene89955.t1 | AT3G59200 | 27.361 | 413 | 207 | 17 | 33 | 407 | 6 | 363 | 4.78e-17 | 83.2 |
MS.gene89955.t1 | AT1G55660 | 27.976 | 336 | 178 | 13 | 34 | 351 | 53 | 342 | 7.10e-17 | 82.8 |
MS.gene89955.t1 | AT2G26030 | 26.237 | 465 | 258 | 20 | 34 | 470 | 4 | 411 | 8.28e-17 | 83.2 |
MS.gene89955.t1 | AT2G26030 | 26.452 | 465 | 252 | 21 | 34 | 470 | 4 | 406 | 8.91e-17 | 83.2 |
MS.gene89955.t1 | AT2G26030 | 26.452 | 465 | 252 | 21 | 34 | 470 | 4 | 406 | 8.91e-17 | 83.2 |
MS.gene89955.t1 | AT4G15060 | 25.721 | 451 | 246 | 19 | 31 | 456 | 23 | 409 | 1.85e-16 | 82.0 |
MS.gene89955.t1 | AT5G38590 | 28.443 | 334 | 178 | 11 | 34 | 360 | 2 | 281 | 2.25e-16 | 80.1 |
MS.gene89955.t1 | AT1G78750 | 25.149 | 505 | 287 | 21 | 24 | 503 | 8 | 446 | 2.63e-16 | 81.6 |
MS.gene89955.t1 | AT1G78750 | 25.149 | 505 | 287 | 21 | 24 | 503 | 8 | 446 | 2.63e-16 | 81.6 |
MS.gene89955.t1 | AT1G51370 | 34.061 | 229 | 102 | 8 | 32 | 260 | 17 | 196 | 2.80e-16 | 80.9 |
MS.gene89955.t1 | AT3G59250 | 24.890 | 454 | 241 | 14 | 34 | 473 | 7 | 374 | 4.07e-16 | 80.9 |
MS.gene89955.t1 | AT5G22700 | 26.293 | 464 | 226 | 18 | 34 | 461 | 6 | 389 | 7.84e-16 | 80.1 |
MS.gene89955.t1 | AT5G22700 | 26.293 | 464 | 226 | 18 | 34 | 461 | 6 | 389 | 7.84e-16 | 80.1 |
MS.gene89955.t1 | AT5G22700 | 26.293 | 464 | 226 | 18 | 34 | 461 | 6 | 389 | 7.84e-16 | 80.1 |
MS.gene89955.t1 | AT5G22700 | 26.293 | 464 | 226 | 18 | 34 | 461 | 6 | 389 | 7.84e-16 | 80.1 |
MS.gene89955.t1 | AT4G22280 | 27.970 | 404 | 214 | 15 | 34 | 421 | 2 | 344 | 1.07e-15 | 79.7 |
MS.gene89955.t1 | AT1G32375 | 24.086 | 465 | 261 | 16 | 34 | 477 | 2 | 395 | 1.20e-15 | 79.7 |
MS.gene89955.t1 | AT1G32375 | 24.086 | 465 | 261 | 16 | 34 | 477 | 2 | 395 | 1.20e-15 | 79.7 |
MS.gene89955.t1 | AT5G44950 | 24.628 | 471 | 273 | 16 | 34 | 481 | 4 | 415 | 1.64e-15 | 79.3 |
MS.gene89955.t1 | AT1G66310 | 26.283 | 487 | 271 | 18 | 30 | 494 | 15 | 435 | 2.27e-15 | 79.0 |
MS.gene89955.t1 | AT5G53635 | 25.918 | 463 | 256 | 18 | 36 | 472 | 2 | 403 | 2.43e-15 | 78.6 |
MS.gene89955.t1 | AT1G55030 | 24.494 | 445 | 260 | 17 | 34 | 469 | 19 | 396 | 4.13e-15 | 77.8 |
MS.gene89955.t1 | AT3G54910 | 27.059 | 340 | 218 | 11 | 137 | 472 | 29 | 342 | 4.59e-15 | 77.4 |
MS.gene89955.t1 | AT3G54910 | 27.059 | 340 | 218 | 11 | 137 | 472 | 29 | 342 | 4.59e-15 | 77.4 |
MS.gene89955.t1 | AT3G54910 | 27.059 | 340 | 218 | 11 | 137 | 472 | 29 | 342 | 4.59e-15 | 77.4 |
MS.gene89955.t1 | AT4G00160 | 26.949 | 449 | 262 | 17 | 34 | 474 | 16 | 406 | 4.74e-15 | 77.8 |
MS.gene89955.t1 | AT5G56410 | 26.907 | 472 | 278 | 23 | 34 | 486 | 2 | 425 | 5.77e-15 | 77.8 |
MS.gene89955.t1 | AT1G55030 | 24.494 | 445 | 260 | 17 | 34 | 469 | 9 | 386 | 5.88e-15 | 77.4 |
MS.gene89955.t1 | AT3G44060 | 28.780 | 410 | 208 | 22 | 39 | 423 | 4 | 354 | 7.21e-15 | 77.0 |
MS.gene89955.t1 | AT4G13965 | 25.974 | 462 | 262 | 20 | 34 | 483 | 10 | 403 | 8.39e-15 | 77.0 |
MS.gene89955.t1 | AT3G58930 | 26.150 | 413 | 220 | 12 | 34 | 407 | 2 | 368 | 1.04e-14 | 77.0 |
MS.gene89955.t1 | AT3G58930 | 26.150 | 413 | 220 | 12 | 34 | 407 | 2 | 368 | 1.04e-14 | 77.0 |
MS.gene89955.t1 | AT3G58930 | 26.150 | 413 | 220 | 12 | 34 | 407 | 2 | 368 | 1.04e-14 | 77.0 |
MS.gene89955.t1 | AT4G22280 | 28.462 | 390 | 202 | 15 | 34 | 407 | 2 | 330 | 1.10e-14 | 75.9 |
MS.gene89955.t1 | AT1G78760 | 26.625 | 477 | 251 | 23 | 32 | 480 | 14 | 419 | 1.26e-14 | 76.6 |
MS.gene89955.t1 | AT5G22700 | 28.117 | 377 | 175 | 13 | 16 | 352 | 25 | 345 | 2.35e-14 | 75.5 |
MS.gene89955.t1 | AT4G10420 | 27.666 | 347 | 206 | 14 | 161 | 494 | 1 | 315 | 2.51e-14 | 74.7 |
MS.gene89955.t1 | AT3G42770 | 30.060 | 336 | 168 | 15 | 39 | 355 | 4 | 291 | 2.72e-14 | 75.9 |
MS.gene89955.t1 | AT1G05080 | 27.332 | 461 | 250 | 18 | 33 | 472 | 12 | 408 | 3.54e-14 | 75.1 |
MS.gene89955.t1 | AT2G04230 | 24.593 | 492 | 286 | 20 | 33 | 502 | 12 | 440 | 4.27e-14 | 75.1 |
MS.gene89955.t1 | AT3G62430 | 27.318 | 399 | 206 | 15 | 34 | 407 | 2 | 341 | 4.63e-14 | 74.7 |
MS.gene89955.t1 | AT3G56780 | 23.636 | 550 | 273 | 21 | 22 | 500 | 2 | 475 | 4.34e-13 | 72.0 |
MS.gene89955.t1 | AT1G66300 | 26.283 | 487 | 271 | 20 | 32 | 494 | 27 | 449 | 1.26e-12 | 70.5 |
MS.gene89955.t1 | AT5G22610 | 24.764 | 529 | 298 | 20 | 33 | 520 | 17 | 486 | 2.21e-12 | 69.7 |
MS.gene89955.t1 | AT5G22660 | 24.686 | 478 | 247 | 19 | 33 | 472 | 12 | 414 | 2.34e-12 | 69.3 |
MS.gene89955.t1 | AT3G59180 | 27.213 | 305 | 179 | 11 | 126 | 403 | 33 | 321 | 3.71e-12 | 68.9 |
MS.gene89955.t1 | AT5G56390 | 25.743 | 303 | 188 | 9 | 182 | 474 | 119 | 394 | 4.33e-12 | 68.6 |
MS.gene89955.t1 | AT3G26920 | 24.768 | 323 | 216 | 10 | 153 | 469 | 4 | 305 | 4.09e-11 | 65.1 |
MS.gene89955.t1 | AT3G26920 | 24.768 | 323 | 216 | 10 | 153 | 469 | 4 | 305 | 4.09e-11 | 65.1 |
MS.gene89955.t1 | AT5G56690 | 28.035 | 453 | 253 | 22 | 36 | 472 | 4 | 399 | 9.21e-11 | 64.3 |
Find 95 sgRNAs with CRISPR-Local
Find 142 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAAAGATTTGATTTCTTCTT+TGG | 0.182970 | 4.2:-47679762 | None:intergenic |
GGTTCCCAACCTCCTTTCTT+TGG | 0.200433 | 4.2:-47681292 | None:intergenic |
AGAAATCCTCCGTACTAGTA+TGG | 0.259970 | 4.2:+47681519 | MS.gene89955:CDS |
CTCGTTACATTTGAATTTGT+TGG | 0.281694 | 4.2:+47681362 | MS.gene89955:CDS |
ATTGCAAGATCCTTAAGTTT+TGG | 0.285282 | 4.2:-47680789 | None:intergenic |
CCGAAAATACATGCAATATA+AGG | 0.328311 | 4.2:+47679807 | MS.gene89955:CDS |
TCTATCTGCTTGCCCACATT+TGG | 0.329908 | 4.2:+47680231 | MS.gene89955:CDS |
GTTCCCAACCTCCTTTCTTT+GGG | 0.336189 | 4.2:-47681291 | None:intergenic |
GGCATTAGATCTCAAGGTTC+AGG | 0.347999 | 4.2:+47679991 | MS.gene89955:CDS |
ATCATGTGGCTGGCAGCCTT+TGG | 0.372716 | 4.2:-47679948 | None:intergenic |
AATAGAAGCTTCGTCAAGAT+TGG | 0.394736 | 4.2:-47680449 | None:intergenic |
ACTCGTGGTCTTAAAATTGC+GGG | 0.405693 | 4.2:+47680081 | MS.gene89955:CDS |
TTCTCTTGTTGATTATTCAT+CGG | 0.410824 | 4.2:+47680396 | MS.gene89955:CDS |
ACTTTCTAATGTCAAATCAT+TGG | 0.410912 | 4.2:+47680522 | MS.gene89955:CDS |
TAATGCAATTGAAGATCATA+TGG | 0.417269 | 4.2:+47681883 | MS.gene89955:CDS |
ACAGAATGCTCCAAAACTTA+AGG | 0.424972 | 4.2:+47680779 | MS.gene89955:CDS |
GGGTTGAAATATCTAAGAAT+TGG | 0.429733 | 4.2:+47680730 | MS.gene89955:CDS |
ATCTGCTTGCCCACATTTGG+AGG | 0.432114 | 4.2:+47680234 | MS.gene89955:CDS |
AAGTGAAAAGAGGTGTTGAT+AGG | 0.432321 | 4.2:-47680286 | None:intergenic |
ATTTCTTCTTTGGACATCAC+AGG | 0.436128 | 4.2:-47679752 | None:intergenic |
AAAGTCAAGGATGGGAATCT+TGG | 0.438367 | 4.2:-47679708 | None:intergenic |
AGTATAGTTATGACATGATC+AGG | 0.440154 | 4.2:-47679530 | None:intergenic |
GGAGGTTGGGAACCCGAGTT+GGG | 0.450492 | 4.2:+47681301 | MS.gene89955:CDS |
CGGATATGAAGAATCTTTAG+TGG | 0.452101 | 4.2:-47680151 | None:intergenic |
ACCCACATGTGTACATCATT+TGG | 0.460055 | 4.2:-47679854 | None:intergenic |
CAAGGTTCAGGAACTTGACC+TGG | 0.463856 | 4.2:+47680003 | MS.gene89955:CDS |
TTTCATGGAGAAACAAATCC+AGG | 0.472087 | 4.2:-47680021 | None:intergenic |
TATACTCAGGTGTTCAGCTC+AGG | 0.473745 | 4.2:+47679547 | MS.gene89955:CDS |
TGAAATCAATTCCCAAAGAA+AGG | 0.479071 | 4.2:+47681280 | MS.gene89955:CDS |
GAGAAAGAACTTCAAGTGAC+GGG | 0.479477 | 4.2:-47680378 | None:intergenic |
TCAAAACATAAAATCTGAGT+TGG | 0.495809 | 4.2:+47681388 | MS.gene89955:CDS |
AATTTGTATACATTCTTGAA+AGG | 0.500717 | 4.2:+47680499 | MS.gene89955:CDS |
ATTCCCAAAGAAAGGAGGTT+GGG | 0.501172 | 4.2:+47681288 | MS.gene89955:CDS |
TTCAAAGGCATTAGATCTCA+AGG | 0.505519 | 4.2:+47679985 | MS.gene89955:CDS |
TTTGTATAGTCATATTGTCT+AGG | 0.515461 | 4.2:-47680421 | None:intergenic |
AGGAGGTTGGGAACCCGAGT+TGG | 0.519909 | 4.2:+47681300 | MS.gene89955:CDS |
CAGAATACACCACAGTTTCA+CGG | 0.519980 | 4.2:-47680171 | None:intergenic |
TGTAGACATGTGGGTTTCAA+AGG | 0.525384 | 4.2:+47679970 | MS.gene89955:CDS |
GTGATACACACGTGGAAAGC+CGG | 0.527179 | 4.2:-47680060 | None:intergenic |
TGTACACATGTGGGTTTCAA+AGG | 0.528762 | 4.2:+47679862 | MS.gene89955:CDS |
CACTCGTGGTCTTAAAATTG+CGG | 0.528781 | 4.2:+47680080 | MS.gene89955:CDS |
ATCGATGGCTCCACCCAACT+CGG | 0.528979 | 4.2:-47681314 | None:intergenic |
AAATATCTAAGAATTGGAGT+TGG | 0.529322 | 4.2:+47680736 | MS.gene89955:CDS |
ATCACAGGGTCTGAAATCTC+TGG | 0.529937 | 4.2:-47679737 | None:intergenic |
CCGAAAATATAAGAAAACTA+AGG | 0.538047 | 4.2:+47679915 | MS.gene89955:CDS |
TCTCTTCAGTAAGTGAAAAG+AGG | 0.541882 | 4.2:-47680296 | None:intergenic |
CATGTGTTCTATCCACAAGA+TGG | 0.542093 | 4.2:+47679672 | MS.gene89955:CDS |
ACTTAAGGATCTTGCAATTG+CGG | 0.547599 | 4.2:+47680794 | MS.gene89955:CDS |
TGGTAATTGAAAGTCAAGGA+TGG | 0.547714 | 4.2:-47679717 | None:intergenic |
TTTCTTCTTTGGACATCACA+GGG | 0.548590 | 4.2:-47679751 | None:intergenic |
GAAATCCTCCGTACTAGTAT+GGG | 0.549114 | 4.2:+47681520 | MS.gene89955:CDS |
AATGTCAAATCATTGGCTCT+CGG | 0.552626 | 4.2:+47680529 | MS.gene89955:CDS |
TGTTATGCAGTTTCTCAGCA+TGG | 0.553413 | 4.2:+47680653 | MS.gene89955:intron |
GGTTGGGAACCCGAGTTGGG+TGG | 0.557765 | 4.2:+47681304 | MS.gene89955:CDS |
AGATCATATGGATGCCTTCG+AGG | 0.557833 | 4.2:+47681895 | MS.gene89955:CDS |
AAAAGAAGTTCCTCCAAATG+TGG | 0.558471 | 4.2:-47680244 | None:intergenic |
GGTGGAGCCATCGATATCTC+CGG | 0.559121 | 4.2:+47681322 | MS.gene89955:CDS |
CTAAGGCTTCATAGTGCCAA+AGG | 0.566503 | 4.2:+47679932 | MS.gene89955:CDS |
CAGGTGTTCAGCTCAGGTCA+TGG | 0.572339 | 4.2:+47679553 | MS.gene89955:CDS |
ACATGTGTACATCATTTGGC+TGG | 0.573480 | 4.2:-47679850 | None:intergenic |
GGTAATTGAAAGTCAAGGAT+GGG | 0.575836 | 4.2:-47679716 | None:intergenic |
ATGTGTTCTATCCACAAGAT+GGG | 0.579779 | 4.2:+47679673 | MS.gene89955:CDS |
AATTCCCAAAGAAAGGAGGT+TGG | 0.583914 | 4.2:+47681287 | MS.gene89955:CDS |
AGACTTCTTGTAAGACATGC+CGG | 0.584270 | 4.2:-47681341 | None:intergenic |
ACTTCGTACCCATACTAGTA+CGG | 0.591904 | 4.2:-47681528 | None:intergenic |
ACATGTCTACATCATGTGGC+TGG | 0.594462 | 4.2:-47679958 | None:intergenic |
AGAGAAAGAACTTCAAGTGA+CGG | 0.597674 | 4.2:-47680379 | None:intergenic |
ATCATGTCATAACTATACTC+AGG | 0.598552 | 4.2:+47679534 | MS.gene89955:CDS |
TCGATGGCTCCACCCAACTC+GGG | 0.600614 | 4.2:-47681313 | None:intergenic |
TCACTCAAGTAAGATAGAGA+AGG | 0.606573 | 4.2:+47681433 | MS.gene89955:CDS |
GCAGATTGACTCCCATCTTG+TGG | 0.609178 | 4.2:-47679684 | None:intergenic |
GCCAAATGATGTACACATGT+GGG | 0.612968 | 4.2:+47679853 | MS.gene89955:CDS |
GTATAACACTTAACAGAAGT+AGG | 0.613262 | 4.2:-47680340 | None:intergenic |
AAAGAAGTTCCTCCAAATGT+GGG | 0.614497 | 4.2:-47680243 | None:intergenic |
GCCACATGATGTAGACATGT+GGG | 0.625234 | 4.2:+47679961 | MS.gene89955:CDS |
AGGATTCAGTCAAGACCACT+CGG | 0.633306 | 4.2:+47681915 | MS.gene89955:CDS |
AATCAATTCCCAAAGAAAGG+AGG | 0.642579 | 4.2:+47681283 | MS.gene89955:CDS |
GGTCTTGACTGAATCCTCGA+AGG | 0.643014 | 4.2:-47681909 | None:intergenic |
GGTGTTGATAGGTAATGCAA+AGG | 0.643336 | 4.2:-47680275 | None:intergenic |
TCGTACCCATACTAGTACGG+AGG | 0.652397 | 4.2:-47681525 | None:intergenic |
TCTTCATATCCGTGAAACTG+TGG | 0.652986 | 4.2:+47680162 | MS.gene89955:CDS |
AGACATGCCGGAGATATCGA+TGG | 0.657183 | 4.2:-47681329 | None:intergenic |
TTCCACGTGTGTATCACTCG+TGG | 0.664048 | 4.2:+47680066 | MS.gene89955:CDS |
AGCCAAATGATGTACACATG+TGG | 0.670458 | 4.2:+47679852 | MS.gene89955:CDS |
CTCGTGGTCTTAAAATTGCG+GGG | 0.675930 | 4.2:+47680082 | MS.gene89955:CDS |
GTGCGTCTTAGGAGAGCAAG+CGG | 0.677611 | 4.2:-47679785 | None:intergenic |
ATATGAAGAATCTTTAGTGG+CGG | 0.681036 | 4.2:-47680148 | None:intergenic |
AGCCACATGATGTAGACATG+TGG | 0.682976 | 4.2:+47679960 | MS.gene89955:CDS |
ACCCACATGTCTACATCATG+TGG | 0.686980 | 4.2:-47679962 | None:intergenic |
TCTCTGGTAATTGAAAGTCA+AGG | 0.687787 | 4.2:-47679721 | None:intergenic |
ACACACGTGGAAAGCCGGAG+CGG | 0.688372 | 4.2:-47680055 | None:intergenic |
AGAAAGAACTTCAAGTGACG+GGG | 0.690617 | 4.2:-47680377 | None:intergenic |
TATGCAGTTTCTCAGCATGG+AGG | 0.703511 | 4.2:+47680656 | MS.gene89955:intron |
GACCACGAGTGATACACACG+TGG | 0.752738 | 4.2:-47680068 | None:intergenic |
ACTAGATTAAAAGTGCCGAG+TGG | 0.759153 | 4.2:-47681930 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTATTCAATATTTATTAC+AGG | + | chr4.2:47681856-47681875 | MS.gene89955:intron | 10.0% |
!! | ATATATTCAAAAAATTTAAG+AGG | - | chr4.2:47681777-47681796 | None:intergenic | 10.0% |
!!! | AAAATTCTAATGATAATTTT+TGG | + | chr4.2:47681238-47681257 | MS.gene89955:intron | 10.0% |
!!! | GTATTGATTTAATTAATTTA+TGG | - | chr4.2:47681117-47681136 | None:intergenic | 10.0% |
!!! | TCACAATTTATTATTTTTAT+GGG | + | chr4.2:47680710-47680729 | MS.gene89955:CDS | 10.0% |
!!! | TTCACAATTTATTATTTTTA+TGG | + | chr4.2:47680709-47680728 | MS.gene89955:CDS | 10.0% |
!!! | ACTTTCTTTTTTAATGAAAA+AGG | + | chr4.2:47681587-47681606 | MS.gene89955:intron | 15.0% |
!! | AAGTAAAATAGTTTGAAAGA+AGG | - | chr4.2:47681186-47681205 | None:intergenic | 20.0% |
!! | AAGTAGGCATATATAAAAAA+AGG | - | chr4.2:47680327-47680346 | None:intergenic | 20.0% |
!! | AATATAATAAGCTAAAAACC+TGG | + | chr4.2:47680869-47680888 | MS.gene89955:intron | 20.0% |
!! | AATTTGTATACATTCTTGAA+AGG | + | chr4.2:47680499-47680518 | MS.gene89955:CDS | 20.0% |
!! | ATGGAACTTGTAATTAAAAA+AGG | - | chr4.2:47680591-47680610 | None:intergenic | 20.0% |
!!! | ATATCTTTTGAATTTTTTCG+TGG | + | chr4.2:47681710-47681729 | MS.gene89955:intron | 20.0% |
!!! | CCTTAGTTTTCTTATATTTT+CGG | - | chr4.2:47679918-47679937 | None:intergenic | 20.0% |
!!! | TAAAGATTTGATTTCTTCTT+TGG | - | chr4.2:47679765-47679784 | None:intergenic | 20.0% |
!!! | TCTTTTTTAATGAAAAAGGT+TGG | + | chr4.2:47681591-47681610 | MS.gene89955:intron | 20.0% |
! | AAATATCTAAGAATTGGAGT+TGG | + | chr4.2:47680736-47680755 | MS.gene89955:CDS | 25.0% |
! | AAGATATAAACTTGTGTTGA+TGG | - | chr4.2:47681697-47681716 | None:intergenic | 25.0% |
! | AATGAGAATAGAATTGCATT+TGG | - | chr4.2:47680624-47680643 | None:intergenic | 25.0% |
! | ACTTTCTAATGTCAAATCAT+TGG | + | chr4.2:47680522-47680541 | MS.gene89955:CDS | 25.0% |
! | ATGAGAATAGAATTGCATTT+GGG | - | chr4.2:47680623-47680642 | None:intergenic | 25.0% |
! | CCGAAAATATAAGAAAACTA+AGG | + | chr4.2:47679915-47679934 | MS.gene89955:CDS | 25.0% |
! | CTTATATGCTATATATCAGT+TGG | + | chr4.2:47681215-47681234 | MS.gene89955:intron | 25.0% |
! | TAATGCAATTGAAGATCATA+TGG | + | chr4.2:47681883-47681902 | MS.gene89955:CDS | 25.0% |
! | TCAAAACATAAAATCTGAGT+TGG | + | chr4.2:47681388-47681407 | MS.gene89955:CDS | 25.0% |
! | TTTGTATAGTCATATTGTCT+AGG | - | chr4.2:47680424-47680443 | None:intergenic | 25.0% |
!! | AATTCTATGTATCTTTTGCT+AGG | - | chr4.2:47680912-47680931 | None:intergenic | 25.0% |
!! | ATAATGTCTAGAACAATAAG+AGG | - | chr4.2:47681668-47681687 | None:intergenic | 25.0% |
!! | CCTTATATTGCATGTATTTT+CGG | - | chr4.2:47679810-47679829 | None:intergenic | 25.0% |
!! | TATAAGACTCTTTTGTTGAT+AGG | - | chr4.2:47679649-47679668 | None:intergenic | 25.0% |
!! | TTCTCTTGTTGATTATTCAT+CGG | + | chr4.2:47680396-47680415 | MS.gene89955:CDS | 25.0% |
!!! | TATTTTTATTTGTAAGCGTG+TGG | + | chr4.2:47680468-47680487 | MS.gene89955:CDS | 25.0% |
AGTAGAAAAAAGTTTACGCA+AGG | + | chr4.2:47681490-47681509 | MS.gene89955:CDS | 30.0% | |
AGTATAGTTATGACATGATC+AGG | - | chr4.2:47679533-47679552 | None:intergenic | 30.0% | |
ATATGAAGAATCTTTAGTGG+CGG | - | chr4.2:47680151-47680170 | None:intergenic | 30.0% | |
ATCATGTCATAACTATACTC+AGG | + | chr4.2:47679534-47679553 | MS.gene89955:CDS | 30.0% | |
CCGAAAATACATGCAATATA+AGG | + | chr4.2:47679807-47679826 | MS.gene89955:CDS | 30.0% | |
CTCGTTACATTTGAATTTGT+TGG | + | chr4.2:47681362-47681381 | MS.gene89955:CDS | 30.0% | |
GGGTTGAAATATCTAAGAAT+TGG | + | chr4.2:47680730-47680749 | MS.gene89955:CDS | 30.0% | |
GTAGAAAAAAGTTTACGCAA+GGG | + | chr4.2:47681491-47681510 | MS.gene89955:CDS | 30.0% | |
GTATAACACTTAACAGAAGT+AGG | - | chr4.2:47680343-47680362 | None:intergenic | 30.0% | |
TAGAAAAAAGTTTACGCAAG+GGG | + | chr4.2:47681492-47681511 | MS.gene89955:CDS | 30.0% | |
TGAAAGAAGGTTAAATTGCA+AGG | - | chr4.2:47681173-47681192 | None:intergenic | 30.0% | |
TGAAATCAATTCCCAAAGAA+AGG | + | chr4.2:47681280-47681299 | MS.gene89955:CDS | 30.0% | |
! | ACTCTTCTTTTCATTGAACT+GGG | - | chr4.2:47681473-47681492 | None:intergenic | 30.0% |
! | ATTGCAAGATCCTTAAGTTT+TGG | - | chr4.2:47680792-47680811 | None:intergenic | 30.0% |
! | ATTTGTTGCTATGATGATGT+GGG | + | chr4.2:47681623-47681642 | MS.gene89955:intron | 30.0% |
! | GAAAGTATATAGACTCTGTA+TGG | - | chr4.2:47681573-47681592 | None:intergenic | 30.0% |
! | TACTCTTCTTTTCATTGAAC+TGG | - | chr4.2:47681474-47681493 | None:intergenic | 30.0% |
! | TAGACAGAGAAATTTTGCAT+TGG | + | chr4.2:47680971-47680990 | MS.gene89955:intron | 30.0% |
! | TATTTGTTGCTATGATGATG+TGG | + | chr4.2:47681622-47681641 | MS.gene89955:intron | 30.0% |
!!! | TTTTTTCGTGGTTGAGAATA+AGG | + | chr4.2:47681722-47681741 | MS.gene89955:intron | 30.0% |
AAAAAATCTTATTGCCGCTC+CGG | + | chr4.2:47680041-47680060 | MS.gene89955:CDS | 35.0% | |
AAAAGAAGTTCCTCCAAATG+TGG | - | chr4.2:47680247-47680266 | None:intergenic | 35.0% | |
AAAGAAGTTCCTCCAAATGT+GGG | - | chr4.2:47680246-47680265 | None:intergenic | 35.0% | |
AATAGAAGCTTCGTCAAGAT+TGG | - | chr4.2:47680452-47680471 | None:intergenic | 35.0% | |
AATCAATTCCCAAAGAAAGG+AGG | + | chr4.2:47681283-47681302 | MS.gene89955:CDS | 35.0% | |
ACAGAATGCTCCAAAACTTA+AGG | + | chr4.2:47680779-47680798 | MS.gene89955:CDS | 35.0% | |
ACTTAAGGATCTTGCAATTG+CGG | + | chr4.2:47680794-47680813 | MS.gene89955:CDS | 35.0% | |
AGAGAAAGAACTTCAAGTGA+CGG | - | chr4.2:47680382-47680401 | None:intergenic | 35.0% | |
ATGTGTTCTATCCACAAGAT+GGG | + | chr4.2:47679673-47679692 | MS.gene89955:CDS | 35.0% | |
ATTTCTTCTTTGGACATCAC+AGG | - | chr4.2:47679755-47679774 | None:intergenic | 35.0% | |
CGGATATGAAGAATCTTTAG+TGG | - | chr4.2:47680154-47680173 | None:intergenic | 35.0% | |
GGTAATTGAAAGTCAAGGAT+GGG | - | chr4.2:47679719-47679738 | None:intergenic | 35.0% | |
TCACTCAAGTAAGATAGAGA+AGG | + | chr4.2:47681433-47681452 | MS.gene89955:CDS | 35.0% | |
TCTCTGGTAATTGAAAGTCA+AGG | - | chr4.2:47679724-47679743 | None:intergenic | 35.0% | |
TCTCTTCAGTAAGTGAAAAG+AGG | - | chr4.2:47680299-47680318 | None:intergenic | 35.0% | |
TGCATTTGGGTGACTAAATA+TGG | - | chr4.2:47680610-47680629 | None:intergenic | 35.0% | |
TGGTAATTGAAAGTCAAGGA+TGG | - | chr4.2:47679720-47679739 | None:intergenic | 35.0% | |
TTTCATGGAGAAACAAATCC+AGG | - | chr4.2:47680024-47680043 | None:intergenic | 35.0% | |
TTTCTTCTTTGGACATCACA+GGG | - | chr4.2:47679754-47679773 | None:intergenic | 35.0% | |
! | TTTGTTGCTATGATGATGTG+GGG | + | chr4.2:47681624-47681643 | MS.gene89955:intron | 35.0% |
!! | AAGTGAAAAGAGGTGTTGAT+AGG | - | chr4.2:47680289-47680308 | None:intergenic | 35.0% |
!! | AATGTCAAATCATTGGCTCT+CGG | + | chr4.2:47680529-47680548 | MS.gene89955:CDS | 35.0% |
!! | TTATATTTTCGGTGCGTCTT+AGG | - | chr4.2:47679907-47679926 | None:intergenic | 35.0% |
!! | TTCAAAGGCATTAGATCTCA+AGG | + | chr4.2:47679985-47680004 | MS.gene89955:CDS | 35.0% |
!!! | GCGGCAATAAGATTTTTTCA+TGG | - | chr4.2:47680039-47680058 | None:intergenic | 35.0% |
AAAGTCAAGGATGGGAATCT+TGG | - | chr4.2:47679711-47679730 | None:intergenic | 40.0% | |
AATGCTTAACATGTGCCCTA+AGG | + | chr4.2:47681074-47681093 | MS.gene89955:intron | 40.0% | |
AATTCCCAAAGAAAGGAGGT+TGG | + | chr4.2:47681287-47681306 | MS.gene89955:CDS | 40.0% | |
ACATGTGTACATCATTTGGC+TGG | - | chr4.2:47679853-47679872 | None:intergenic | 40.0% | |
ACCCACATGTGTACATCATT+TGG | - | chr4.2:47679857-47679876 | None:intergenic | 40.0% | |
ACTTCGTACCCATACTAGTA+CGG | - | chr4.2:47681531-47681550 | None:intergenic | 40.0% | |
AGAAAGAACTTCAAGTGACG+GGG | - | chr4.2:47680380-47680399 | None:intergenic | 40.0% | |
AGAAATCCTCCGTACTAGTA+TGG | + | chr4.2:47681519-47681538 | MS.gene89955:CDS | 40.0% | |
AGACTTCTTGTAAGACATGC+CGG | - | chr4.2:47681344-47681363 | None:intergenic | 40.0% | |
AGCCAAATGATGTACACATG+TGG | + | chr4.2:47679852-47679871 | MS.gene89955:CDS | 40.0% | |
ATGCTTAACATGTGCCCTAA+GGG | + | chr4.2:47681075-47681094 | MS.gene89955:intron | 40.0% | |
ATTCCCAAAGAAAGGAGGTT+GGG | + | chr4.2:47681288-47681307 | MS.gene89955:CDS | 40.0% | |
CAGAATACACCACAGTTTCA+CGG | - | chr4.2:47680174-47680193 | None:intergenic | 40.0% | |
CATGTGTTCTATCCACAAGA+TGG | + | chr4.2:47679672-47679691 | MS.gene89955:CDS | 40.0% | |
GAAATCCTCCGTACTAGTAT+GGG | + | chr4.2:47681520-47681539 | MS.gene89955:CDS | 40.0% | |
GAGAAAGAACTTCAAGTGAC+GGG | - | chr4.2:47680381-47680400 | None:intergenic | 40.0% | |
GCCAAATGATGTACACATGT+GGG | + | chr4.2:47679853-47679872 | MS.gene89955:CDS | 40.0% | |
TCTTCATATCCGTGAAACTG+TGG | + | chr4.2:47680162-47680181 | MS.gene89955:CDS | 40.0% | |
TGTACACATGTGGGTTTCAA+AGG | + | chr4.2:47679862-47679881 | MS.gene89955:CDS | 40.0% | |
TGTAGACATGTGGGTTTCAA+AGG | + | chr4.2:47679970-47679989 | MS.gene89955:CDS | 40.0% | |
TGTTATGCAGTTTCTCAGCA+TGG | + | chr4.2:47680653-47680672 | MS.gene89955:intron | 40.0% | |
! | ACTCGTGGTCTTAAAATTGC+GGG | + | chr4.2:47680081-47680100 | MS.gene89955:CDS | 40.0% |
! | CACTCGTGGTCTTAAAATTG+CGG | + | chr4.2:47680080-47680099 | MS.gene89955:CDS | 40.0% |
!! | ATGTATTTTCGGTGCGTCTT+AGG | - | chr4.2:47679799-47679818 | None:intergenic | 40.0% |
!! | GGTGTTGATAGGTAATGCAA+AGG | - | chr4.2:47680278-47680297 | None:intergenic | 40.0% |
ACATGTCTACATCATGTGGC+TGG | - | chr4.2:47679961-47679980 | None:intergenic | 45.0% | |
ACCCACATGTCTACATCATG+TGG | - | chr4.2:47679965-47679984 | None:intergenic | 45.0% | |
AGATCATATGGATGCCTTCG+AGG | + | chr4.2:47681895-47681914 | MS.gene89955:CDS | 45.0% | |
AGCCACATGATGTAGACATG+TGG | + | chr4.2:47679960-47679979 | MS.gene89955:CDS | 45.0% | |
AGGATTCAGTCAAGACCACT+CGG | + | chr4.2:47681915-47681934 | MS.gene89955:CDS | 45.0% | |
CTAAGGCTTCATAGTGCCAA+AGG | + | chr4.2:47679932-47679951 | MS.gene89955:CDS | 45.0% | |
CTTGCAAACTTGTGCCCTTA+GGG | - | chr4.2:47681092-47681111 | None:intergenic | 45.0% | |
GCCACATGATGTAGACATGT+GGG | + | chr4.2:47679961-47679980 | MS.gene89955:CDS | 45.0% | |
GGCATTAGATCTCAAGGTTC+AGG | + | chr4.2:47679991-47680010 | MS.gene89955:CDS | 45.0% | |
GTTCCCAACCTCCTTTCTTT+GGG | - | chr4.2:47681294-47681313 | None:intergenic | 45.0% | |
TATACTCAGGTGTTCAGCTC+AGG | + | chr4.2:47679547-47679566 | MS.gene89955:CDS | 45.0% | |
TATGCAGTTTCTCAGCATGG+AGG | + | chr4.2:47680656-47680675 | MS.gene89955:intron | 45.0% | |
TCTATCTGCTTGCCCACATT+TGG | + | chr4.2:47680231-47680250 | MS.gene89955:CDS | 45.0% | |
TCTTGCAAACTTGTGCCCTT+AGG | - | chr4.2:47681093-47681112 | None:intergenic | 45.0% | |
! | ATCACAGGGTCTGAAATCTC+TGG | - | chr4.2:47679740-47679759 | None:intergenic | 45.0% |
! | CTCGTGGTCTTAAAATTGCG+GGG | + | chr4.2:47680082-47680101 | MS.gene89955:CDS | 45.0% |
!!! | GAATATATTAATTTTTTTAT+CGG | + | chr4.2:47681789-47681808 | MS.gene89955:intron | 5.0% |
!!! | TATTGATTTAATTAATTTAT+GGG | - | chr4.2:47681116-47681135 | None:intergenic | 5.0% |
AGACATGCCGGAGATATCGA+TGG | - | chr4.2:47681332-47681351 | None:intergenic | 50.0% | |
ATCTGCTTGCCCACATTTGG+AGG | + | chr4.2:47680234-47680253 | MS.gene89955:CDS | 50.0% | |
CAAGGTTCAGGAACTTGACC+TGG | + | chr4.2:47680003-47680022 | MS.gene89955:CDS | 50.0% | |
GGTCTTGACTGAATCCTCGA+AGG | - | chr4.2:47681912-47681931 | None:intergenic | 50.0% | |
GGTTCCCAACCTCCTTTCTT+TGG | - | chr4.2:47681295-47681314 | None:intergenic | 50.0% | |
GTCTTTGCTCTTCTTGTGCC+AGG | - | chr4.2:47680890-47680909 | None:intergenic | 50.0% | |
GTGATACACACGTGGAAAGC+CGG | - | chr4.2:47680063-47680082 | None:intergenic | 50.0% | |
TCGTACCCATACTAGTACGG+AGG | - | chr4.2:47681528-47681547 | None:intergenic | 50.0% | |
TTCCACGTGTGTATCACTCG+TGG | + | chr4.2:47680066-47680085 | MS.gene89955:CDS | 50.0% | |
! | GCAGATTGACTCCCATCTTG+TGG | - | chr4.2:47679687-47679706 | None:intergenic | 50.0% |
! | GTTGCTATGATGATGTGGGG+TGG | + | chr4.2:47681627-47681646 | MS.gene89955:intron | 50.0% |
ATCATGTGGCTGGCAGCCTT+TGG | - | chr4.2:47679951-47679970 | None:intergenic | 55.0% | |
ATCGATGGCTCCACCCAACT+CGG | - | chr4.2:47681317-47681336 | None:intergenic | 55.0% | |
CAGGTGTTCAGCTCAGGTCA+TGG | + | chr4.2:47679553-47679572 | MS.gene89955:CDS | 55.0% | |
GACCACGAGTGATACACACG+TGG | - | chr4.2:47680071-47680090 | None:intergenic | 55.0% | |
GGTGGAGCCATCGATATCTC+CGG | + | chr4.2:47681322-47681341 | MS.gene89955:CDS | 55.0% | |
GTGCGTCTTAGGAGAGCAAG+CGG | - | chr4.2:47679788-47679807 | None:intergenic | 55.0% | |
ACACACGTGGAAAGCCGGAG+CGG | - | chr4.2:47680058-47680077 | None:intergenic | 60.0% | |
AGGAGGTTGGGAACCCGAGT+TGG | + | chr4.2:47681300-47681319 | MS.gene89955:CDS | 60.0% | |
GGAGGTTGGGAACCCGAGTT+GGG | + | chr4.2:47681301-47681320 | MS.gene89955:CDS | 60.0% | |
TCGATGGCTCCACCCAACTC+GGG | - | chr4.2:47681316-47681335 | None:intergenic | 60.0% | |
! | GGTTGGGAACCCGAGTTGGG+TGG | + | chr4.2:47681304-47681323 | MS.gene89955:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 47679497 | 47681946 | 47679497 | ID=MS.gene89955 |
chr4.2 | mRNA | 47679497 | 47681946 | 47679497 | ID=MS.gene89955.t1;Parent=MS.gene89955 |
chr4.2 | exon | 47679497 | 47680567 | 47679497 | ID=MS.gene89955.t1.exon1;Parent=MS.gene89955.t1 |
chr4.2 | CDS | 47679497 | 47680567 | 47679497 | ID=cds.MS.gene89955.t1;Parent=MS.gene89955.t1 |
chr4.2 | exon | 47680663 | 47680815 | 47680663 | ID=MS.gene89955.t1.exon2;Parent=MS.gene89955.t1 |
chr4.2 | CDS | 47680663 | 47680815 | 47680663 | ID=cds.MS.gene89955.t1;Parent=MS.gene89955.t1 |
chr4.2 | exon | 47681272 | 47681541 | 47681272 | ID=MS.gene89955.t1.exon3;Parent=MS.gene89955.t1 |
chr4.2 | CDS | 47681272 | 47681541 | 47681272 | ID=cds.MS.gene89955.t1;Parent=MS.gene89955.t1 |
chr4.2 | exon | 47681878 | 47681946 | 47681878 | ID=MS.gene89955.t1.exon4;Parent=MS.gene89955.t1 |
chr4.2 | CDS | 47681878 | 47681946 | 47681878 | ID=cds.MS.gene89955.t1;Parent=MS.gene89955.t1 |
Gene Sequence |
Protein sequence |