AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene005795


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005795.t1 MTR_4g056040 61.053 475 146 6 1 440 1 471 0.0 528
MS.gene005795.t1 MTR_4g056020 62.585 441 156 5 1 436 1 437 0.0 513
MS.gene005795.t1 MTR_4g056030 61.905 441 159 5 1 436 1 437 1.14e-176 503
MS.gene005795.t1 MTR_1g038710 63.004 446 150 7 1 436 11 451 7.00e-175 498
MS.gene005795.t1 MTR_4g055580 59.205 478 148 8 1 436 92 564 5.03e-169 488
MS.gene005795.t1 MTR_4g055990 57.764 483 153 8 1 436 1 479 1.84e-168 483
MS.gene005795.t1 MTR_4g055990 57.764 483 153 8 1 436 1 479 6.17e-168 482
MS.gene005795.t1 MTR_1g090883 69.143 350 104 2 2 351 12 357 1.41e-166 474
MS.gene005795.t1 MTR_4g056070 58.730 441 134 7 1 397 1 437 3.03e-159 457
MS.gene005795.t1 MTR_1g090900 93.258 178 12 0 1 178 1 178 3.90e-114 333
MS.gene005795.t1 MTR_7g110920 52.368 359 109 6 101 436 1 320 5.74e-105 315
MS.gene005795.t1 MTR_4g093690 56.089 271 106 9 7 272 14 276 5.18e-78 244
MS.gene005795.t1 MTR_4g056020 64.539 141 45 2 301 436 1 141 7.22e-54 177
MS.gene005795.t1 MTR_4g056010 70.968 93 26 1 75 167 6 97 7.99e-34 122
MS.gene005795.t1 MTR_5g084070 30.841 428 255 15 5 421 7 404 4.33e-30 121
MS.gene005795.t1 MTR_1g090890 65.116 86 28 1 351 436 33 116 3.85e-29 110
MS.gene005795.t1 MTR_5g080710 29.691 421 253 16 11 416 33 425 1.09e-26 112
MS.gene005795.t1 MTR_8g445780 28.148 405 248 14 9 396 11 389 4.99e-25 106
MS.gene005795.t1 MTR_8g014260 26.582 474 278 16 8 453 13 444 5.06e-25 107
MS.gene005795.t1 MTR_4g032730 27.594 453 253 14 7 411 11 436 4.15e-24 104
MS.gene005795.t1 MTR_8g468810 28.341 434 274 18 6 418 20 437 3.58e-23 102
MS.gene005795.t1 MTR_8g467800 28.636 440 273 15 4 421 13 433 4.16e-23 101
MS.gene005795.t1 MTR_8g062270 28.074 431 258 17 11 411 16 424 2.21e-22 99.8
MS.gene005795.t1 MTR_6g011460 27.644 416 210 16 11 411 46 385 9.25e-22 97.4
MS.gene005795.t1 MTR_7g115270 27.644 416 230 15 10 411 11 369 1.50e-21 96.7
MS.gene005795.t1 MTR_7g034115 26.699 412 220 12 11 411 11 351 3.81e-21 95.1
MS.gene005795.t1 MTR_3g108560 28.851 409 217 15 8 411 17 356 7.90e-21 94.4
MS.gene005795.t1 MTR_3g107100 27.972 429 226 18 1 415 1 360 3.31e-20 92.8
MS.gene005795.t1 MTR_2g005990 25.959 443 231 16 11 424 6 380 8.57e-20 91.3
MS.gene005795.t1 MTR_4g080590 26.761 426 262 17 10 412 22 420 1.23e-19 91.3
MS.gene005795.t1 MTR_1g085120 27.483 433 220 16 11 423 92 450 2.50e-19 90.5
MS.gene005795.t1 MTR_8g468840 26.291 426 272 16 10 411 13 420 2.50e-19 90.5
MS.gene005795.t1 MTR_1g085120 27.252 433 221 16 11 423 167 525 4.38e-19 90.1
MS.gene005795.t1 MTR_0492s0020 27.451 408 223 14 6 411 81 417 8.30e-19 89.0
MS.gene005795.t1 MTR_0543s0010 27.451 408 223 14 6 411 81 417 1.07e-18 88.6
MS.gene005795.t1 MTR_4g039440 26.570 414 220 17 11 411 34 376 1.58e-18 87.8
MS.gene005795.t1 MTR_7g007080 27.869 427 211 20 9 412 2 354 2.10e-18 87.0
MS.gene005795.t1 MTR_3g108150 28.293 410 227 14 6 411 8 354 2.13e-18 87.0
MS.gene005795.t1 MTR_7g056433 25.298 419 231 14 6 411 7 356 5.40e-18 85.9
MS.gene005795.t1 MTR_8g058970 26.281 449 272 16 4 411 12 442 5.65e-18 86.7
MS.gene005795.t1 MTR_8g467800 30.994 342 200 14 5 332 14 333 7.91e-18 84.7
MS.gene005795.t1 MTR_7g033945 34.463 177 101 4 1 167 1 172 1.04e-17 81.3
MS.gene005795.t1 MTR_1g053025 25.173 433 245 12 11 424 2 374 1.09e-17 85.1
MS.gene005795.t1 MTR_5g039950 25.416 421 248 14 6 411 18 387 1.42e-17 85.1
MS.gene005795.t1 MTR_4g080590 29.121 364 210 15 10 350 22 360 1.83e-17 84.3
MS.gene005795.t1 MTR_1g041245 33.166 199 120 4 1 195 1 190 2.10e-17 84.0
MS.gene005795.t1 MTR_3g109982 26.211 454 270 13 10 416 12 447 2.89e-17 85.1
MS.gene005795.t1 MTR_2g083840 26.950 423 270 15 9 411 19 422 3.24e-17 84.0
MS.gene005795.t1 MTR_3g087260 26.549 452 254 14 10 416 11 429 7.12e-17 83.2
MS.gene005795.t1 MTR_6g022500 27.446 419 210 18 11 411 101 443 1.25e-16 82.4
MS.gene005795.t1 MTR_1g107385 26.846 447 236 17 5 424 26 408 1.88e-16 81.6
MS.gene005795.t1 MTR_3g048290 24.766 428 285 12 7 411 19 432 2.69e-16 81.3
MS.gene005795.t1 MTR_7g033990 25.000 424 232 14 1 411 1 351 2.98e-16 80.9
MS.gene005795.t1 MTR_7g098570 25.728 412 224 13 11 411 20 360 3.16e-16 81.3
MS.gene005795.t1 MTR_7g055943 25.459 436 234 15 11 426 40 404 5.10e-16 80.1
MS.gene005795.t1 MTR_7g056277 24.940 417 227 14 11 416 259 600 5.90e-16 80.9
MS.gene005795.t1 MTR_7g060470 26.218 431 237 18 11 422 3 371 6.20e-16 79.7
MS.gene005795.t1 MTR_7g088260 25.000 416 237 14 6 414 86 433 7.72e-16 79.7
MS.gene005795.t1 MTR_7g056287 24.824 427 235 15 11 426 3 354 8.33e-16 79.3
MS.gene005795.t1 MTR_3g023630 24.344 419 222 13 9 411 6 345 1.47e-15 78.6
MS.gene005795.t1 MTR_7g033915 35.948 153 86 3 1 143 1 151 1.79e-15 78.2
MS.gene005795.t1 MTR_8g468760 30.208 288 163 12 5 271 3 273 3.01e-15 77.8
MS.gene005795.t1 MTR_3g082890 25.776 419 238 15 8 411 94 454 6.64e-15 77.0
MS.gene005795.t1 MTR_2g007500 26.341 410 196 19 4 388 7 335 8.24e-15 75.9
MS.gene005795.t1 MTR_7g032380 32.203 177 110 3 1 172 1 172 8.93e-15 75.9
MS.gene005795.t1 MTR_3g099900 25.316 395 245 16 8 379 15 382 1.51e-14 75.5
MS.gene005795.t1 MTR_4g081030 29.118 340 196 14 7 327 13 326 3.40e-14 74.3
MS.gene005795.t1 MTR_1g085120 27.901 362 169 15 11 352 179 468 3.81e-14 74.7
MS.gene005795.t1 MTR_7g056447 35.323 201 111 7 4 198 2 189 6.42e-14 72.4
MS.gene005795.t1 MTR_4g080773 26.106 452 275 17 1 411 1 434 9.50e-14 73.6
MS.gene005795.t1 MTR_4g080773 26.106 452 275 17 1 411 1 434 1.03e-13 73.6
MS.gene005795.t1 MTR_3g014590 27.987 318 194 9 1 302 1 299 1.10e-13 72.8
MS.gene005795.t1 MTR_6g022360 29.437 231 116 9 11 221 43 246 1.94e-13 72.0
MS.gene005795.t1 MTR_8g062310 26.914 431 247 21 1 412 15 396 2.41e-13 72.0
MS.gene005795.t1 MTR_3g014550 27.129 317 199 7 1 302 1 300 2.52e-13 71.6
MS.gene005795.t1 MTR_5g005690 28.571 217 143 4 7 219 17 225 2.58e-13 72.0
MS.gene005795.t1 MTR_8g085430 28.169 213 131 5 11 211 11 213 3.31e-13 70.9
MS.gene005795.t1 MTR_4g045900 24.101 473 283 15 11 418 26 487 5.08e-13 71.2
MS.gene005795.t1 MTR_6g040270 25.061 411 221 16 13 411 10 345 5.97e-13 70.5
MS.gene005795.t1 MTR_5g058100 25.121 414 225 14 11 411 9 350 6.58e-13 70.5
MS.gene005795.t1 MTR_2g047848 25.607 453 247 19 6 419 2 403 6.87e-13 70.5
MS.gene005795.t1 MTR_4g050930 25.680 331 226 8 5 326 23 342 7.62e-13 70.5
MS.gene005795.t1 MTR_3g107120 26.573 429 228 15 4 411 2 364 1.40e-12 69.3
MS.gene005795.t1 MTR_5g073420 24.379 443 240 14 1 425 1 366 1.62e-12 69.3
MS.gene005795.t1 MTR_1g013560 24.490 441 245 17 7 409 15 405 1.73e-12 69.3
MS.gene005795.t1 MTR_5g040850 27.130 446 242 21 6 419 2 396 1.81e-12 69.3
MS.gene005795.t1 MTR_4g050930 25.994 327 222 8 9 326 27 342 2.13e-12 69.3
MS.gene005795.t1 MTR_7g033940 35.433 127 74 3 13 134 96 219 3.35e-12 66.2
MS.gene005795.t1 MTR_7g023310 23.697 422 291 13 6 411 21 427 4.28e-12 68.2
MS.gene005795.t1 MTR_1g108820 25.587 426 239 15 5 419 2 360 4.43e-12 67.8
MS.gene005795.t1 MTR_4g090940 27.193 342 210 10 5 326 153 475 5.40e-12 68.2
MS.gene005795.t1 MTR_7g039630 28.338 367 187 14 10 350 22 338 6.11e-12 67.0
MS.gene005795.t1 MTR_3g107160 23.628 419 244 12 4 411 3 356 8.65e-12 67.0
MS.gene005795.t1 MTR_4g092300 26.190 336 227 6 5 326 19 347 1.14e-11 67.4
MS.gene005795.t1 MTR_4g051480 26.190 336 227 6 5 326 19 347 1.16e-11 67.4
MS.gene005795.t1 MTR_8g014160 28.391 317 185 12 4 295 34 333 1.24e-11 66.6
MS.gene005795.t1 MTR_7g017280 24.928 345 227 11 4 324 141 477 1.32e-11 67.0
MS.gene005795.t1 MTR_5g045170 29.167 168 103 5 257 420 212 367 1.37e-11 66.2
MS.gene005795.t1 MTR_4g045680 26.349 315 204 11 8 308 13 313 1.81e-11 65.9
MS.gene005795.t1 MTR_4g092430 24.219 384 255 10 7 371 39 405 1.92e-11 66.2
MS.gene005795.t1 MTR_4g024680 30.612 196 107 8 7 201 518 685 1.95e-11 66.6
MS.gene005795.t1 MTR_3g108560 28.693 352 177 15 8 354 17 299 1.98e-11 65.5
MS.gene005795.t1 MTR_4g024780 29.612 206 131 8 2 201 136 333 2.67e-11 65.9
MS.gene005795.t1 MTR_1089s0010 23.040 421 231 13 5 411 2 343 3.51e-11 65.1
MS.gene005795.t1 MTR_7g098510 33.529 170 99 5 11 173 18 180 3.96e-11 65.1
MS.gene005795.t1 MTR_7g056430 27.465 426 206 13 4 416 2 337 4.36e-11 65.9
MS.gene005795.t1 MTR_4g130200 24.819 415 235 15 10 416 19 364 5.54e-11 64.7
MS.gene005795.t1 MTR_7g032370 32.258 155 96 4 22 172 1 150 5.72e-11 64.3
MS.gene005795.t1 MTR_7g056420 27.465 426 206 13 4 416 2 337 5.84e-11 65.5
MS.gene005795.t1 MTR_7g034110 33.613 119 74 3 1 117 1 116 7.90e-11 63.9
MS.gene005795.t1 MTR_1g021820 26.214 412 234 18 6 395 23 386 9.92e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005795.t1 AT4G10400 31.553 412 236 17 11 411 2 378 2.81e-31 124
MS.gene005795.t1 AT4G10400 31.553 412 236 17 11 411 2 378 2.81e-31 124
MS.gene005795.t1 AT4G10400 31.553 412 236 17 11 411 2 378 2.81e-31 124
MS.gene005795.t1 AT4G26340 28.941 425 260 16 11 422 2 397 7.58e-31 123
MS.gene005795.t1 AT2G26860 29.187 418 258 14 10 411 1 396 5.28e-29 118
MS.gene005795.t1 AT2G26860 29.187 418 258 14 10 411 1 396 5.28e-29 118
MS.gene005795.t1 AT4G00315 28.736 435 258 19 11 416 2 413 6.01e-29 118
MS.gene005795.t1 AT5G60610 29.384 422 240 17 11 411 2 386 6.90e-28 114
MS.gene005795.t1 AT5G60610 29.384 422 240 17 11 411 2 386 6.90e-28 114
MS.gene005795.t1 AT3G59190 31.733 375 208 13 10 351 11 370 7.39e-28 114
MS.gene005795.t1 AT3G59190 31.733 375 208 13 10 351 11 370 1.28e-27 115
MS.gene005795.t1 AT1G55660 28.018 439 256 21 11 416 53 464 4.21e-27 114
MS.gene005795.t1 AT3G59230 27.902 448 263 16 10 412 11 443 4.38e-27 114
MS.gene005795.t1 AT5G56370 28.673 422 254 18 11 420 2 388 1.71e-26 111
MS.gene005795.t1 AT5G56370 28.673 422 254 18 11 420 2 388 1.71e-26 111
MS.gene005795.t1 AT5G56400 27.700 426 265 14 1 411 23 420 4.42e-25 107
MS.gene005795.t1 AT4G26350 27.002 437 262 17 11 422 2 406 2.32e-24 105
MS.gene005795.t1 AT5G56420 28.438 429 261 17 10 426 5 399 2.80e-24 104
MS.gene005795.t1 AT5G56420 28.438 429 261 17 10 426 5 399 2.80e-24 104
MS.gene005795.t1 AT5G56420 28.438 429 261 17 10 426 5 399 2.80e-24 104
MS.gene005795.t1 AT5G38590 28.641 412 257 15 11 413 2 385 1.40e-23 102
MS.gene005795.t1 AT4G14103 29.428 367 216 14 10 351 7 355 1.80e-23 102
MS.gene005795.t1 AT4G14103 29.428 367 216 14 10 351 7 355 1.80e-23 102
MS.gene005795.t1 AT2G04230 27.155 464 274 16 9 443 11 439 1.84e-23 102
MS.gene005795.t1 AT5G62970 27.564 468 261 21 11 432 2 437 2.36e-23 102
MS.gene005795.t1 AT5G41840 27.907 387 218 11 11 351 14 385 3.04e-23 102
MS.gene005795.t1 AT4G14103 29.428 367 216 14 10 351 7 355 3.47e-23 102
MS.gene005795.t1 AT3G26930 28.571 420 260 16 2 409 12 403 2.30e-22 99.8
MS.gene005795.t1 AT5G53635 28.571 427 252 18 13 411 2 403 2.38e-22 99.4
MS.gene005795.t1 AT5G56380 25.285 439 281 11 11 424 2 418 2.57e-22 99.4
MS.gene005795.t1 AT5G56380 25.285 439 281 11 11 424 2 418 2.57e-22 99.4
MS.gene005795.t1 AT2G42720 30.518 367 208 14 11 351 2 347 2.75e-22 99.4
MS.gene005795.t1 AT3G50710 28.087 413 256 13 11 407 2 389 5.84e-22 98.2
MS.gene005795.t1 AT3G52680 29.358 436 244 17 9 421 19 413 5.96e-22 98.6
MS.gene005795.t1 AT5G56440 27.506 429 250 16 11 411 2 397 7.85e-22 97.8
MS.gene005795.t1 AT1G51370 27.400 427 259 16 3 411 11 404 1.40e-21 97.1
MS.gene005795.t1 AT4G00160 28.266 421 256 12 10 413 15 406 1.73e-21 97.1
MS.gene005795.t1 AT4G14096 27.021 433 264 18 10 412 7 417 1.84e-21 97.1
MS.gene005795.t1 AT4G14096 27.021 433 264 18 10 412 7 417 1.84e-21 97.1
MS.gene005795.t1 AT5G41830 28.421 380 222 14 7 351 9 373 2.01e-21 97.4
MS.gene005795.t1 AT4G09920 31.081 296 183 10 10 299 1 281 4.16e-21 93.6
MS.gene005795.t1 AT4G09920 31.081 296 183 10 10 299 1 281 4.16e-21 93.6
MS.gene005795.t1 AT4G09920 31.081 296 183 10 10 299 1 281 4.16e-21 93.6
MS.gene005795.t1 AT5G44950 25.676 444 270 17 10 421 3 418 8.87e-21 94.7
MS.gene005795.t1 AT4G00320 26.471 408 247 13 7 378 9 399 9.36e-21 95.1
MS.gene005795.t1 AT1G32375 26.179 424 267 14 11 417 2 396 1.84e-20 93.6
MS.gene005795.t1 AT1G32375 26.179 424 267 14 11 417 2 396 1.84e-20 93.6
MS.gene005795.t1 AT4G09920 31.058 293 181 10 11 297 2 279 2.84e-20 91.7
MS.gene005795.t1 AT4G09920 31.058 293 181 10 11 297 2 279 2.84e-20 91.7
MS.gene005795.t1 AT1G78760 27.434 452 255 18 9 426 14 426 5.93e-20 92.4
MS.gene005795.t1 AT5G56370 29.226 349 205 16 10 350 1 315 6.06e-20 90.9
MS.gene005795.t1 AT3G58960 25.330 454 271 16 11 413 2 438 9.41e-20 92.0
MS.gene005795.t1 AT3G59200 28.947 380 211 15 10 351 6 364 1.08e-19 90.9
MS.gene005795.t1 AT3G59250 26.879 439 253 16 10 426 6 398 1.12e-19 91.3
MS.gene005795.t1 AT3G59200 28.871 381 212 15 10 352 6 365 1.94e-19 91.3
MS.gene005795.t1 AT3G59160 24.757 412 237 13 10 365 12 406 2.29e-19 90.9
MS.gene005795.t1 AT3G49030 27.578 417 261 16 10 413 20 408 3.87e-19 89.7
MS.gene005795.t1 AT4G13965 27.674 430 252 21 9 420 8 396 5.12e-19 89.4
MS.gene005795.t1 AT5G53840 27.465 426 261 17 4 411 11 406 6.16e-19 89.4
MS.gene005795.t1 AT5G22610 26.739 460 269 18 3 433 10 430 7.50e-19 89.4
MS.gene005795.t1 AT3G26930 27.792 385 238 16 37 409 2 358 1.42e-18 87.8
MS.gene005795.t1 AT1G55660 28.972 321 181 15 10 301 52 354 1.70e-18 87.0
MS.gene005795.t1 AT3G59210 27.467 375 224 11 7 351 3 359 2.01e-18 87.8
MS.gene005795.t1 AT3G59210 27.467 375 224 11 7 351 3 359 2.01e-18 87.8
MS.gene005795.t1 AT3G59210 27.467 375 224 11 7 351 3 359 2.01e-18 87.8
MS.gene005795.t1 AT3G59210 27.467 375 224 11 7 351 3 359 2.01e-18 87.8
MS.gene005795.t1 AT3G59210 27.467 375 224 11 7 351 3 359 2.01e-18 87.8
MS.gene005795.t1 AT3G54910 28.319 339 214 10 77 411 29 342 2.13e-18 87.0
MS.gene005795.t1 AT3G54910 28.319 339 214 10 77 411 29 342 2.13e-18 87.0
MS.gene005795.t1 AT3G54910 28.319 339 214 10 77 411 29 342 2.13e-18 87.0
MS.gene005795.t1 AT5G56410 25.821 457 281 17 11 433 2 434 2.14e-18 87.8
MS.gene005795.t1 AT5G18770 26.327 452 287 15 10 433 23 456 3.02e-18 87.4
MS.gene005795.t1 AT5G18780 25.952 420 268 16 10 409 10 406 5.90e-18 86.3
MS.gene005795.t1 AT5G18780 25.952 420 268 16 10 409 10 406 5.90e-18 86.3
MS.gene005795.t1 AT5G22610 26.695 472 284 19 3 433 10 460 7.22e-18 86.3
MS.gene005795.t1 AT2G42730 26.991 452 269 19 10 424 4 431 8.86e-18 85.9
MS.gene005795.t1 AT4G13960 26.058 449 271 16 11 422 2 426 1.13e-17 85.5
MS.gene005795.t1 AT4G13960 26.058 449 271 16 11 422 2 426 1.13e-17 85.5
MS.gene005795.t1 AT4G10420 28.972 321 188 12 101 411 1 291 1.14e-17 84.3
MS.gene005795.t1 AT5G22730 25.701 428 268 16 10 409 27 432 1.16e-17 85.5
MS.gene005795.t1 AT5G22730 25.701 428 268 16 10 409 27 432 1.16e-17 85.5
MS.gene005795.t1 AT5G38570 24.760 416 246 12 11 422 2 354 2.10e-17 84.0
MS.gene005795.t1 AT3G58860 25.265 471 285 15 8 439 4 446 3.36e-17 84.0
MS.gene005795.t1 AT5G50270 25.882 425 274 16 11 419 2 401 5.85e-17 83.2
MS.gene005795.t1 AT5G22700 28.066 424 254 16 11 408 6 404 5.89e-17 83.2
MS.gene005795.t1 AT5G22700 28.066 424 254 16 11 408 6 404 5.89e-17 83.2
MS.gene005795.t1 AT5G22700 28.066 424 254 16 11 408 6 404 5.89e-17 83.2
MS.gene005795.t1 AT5G22700 28.066 424 254 16 11 408 6 404 5.89e-17 83.2
MS.gene005795.t1 AT5G22700 28.066 424 254 16 11 408 43 441 1.33e-16 82.4
MS.gene005795.t1 AT1G51370 27.068 399 241 15 3 384 11 376 1.43e-16 82.0
MS.gene005795.t1 AT1G58310 24.843 479 280 17 10 426 7 467 1.46e-16 82.4
MS.gene005795.t1 AT3G03040 26.542 373 226 12 11 351 2 358 1.47e-16 82.0
MS.gene005795.t1 AT3G49150 23.448 435 289 13 10 412 15 437 2.08e-16 81.6
MS.gene005795.t1 AT1G51370 29.388 245 148 7 3 244 11 233 2.16e-16 80.9
MS.gene005795.t1 AT5G56810 26.730 419 258 13 11 411 15 402 3.07e-16 80.9
MS.gene005795.t1 AT5G27750 25.056 443 267 15 11 411 5 424 3.89e-16 80.9
MS.gene005795.t1 AT5G38590 30.508 295 181 12 10 298 1 277 4.33e-16 79.0
MS.gene005795.t1 AT5G44490 26.667 480 278 20 6 444 12 458 4.59e-16 80.5
MS.gene005795.t1 AT4G22280 29.834 362 225 11 10 362 1 342 6.05e-16 80.1
MS.gene005795.t1 AT1G16930 25.057 435 275 14 5 416 9 415 7.03e-16 80.1
MS.gene005795.t1 AT1G16930 25.057 435 275 14 5 416 9 415 7.03e-16 80.1
MS.gene005795.t1 AT1G16930 25.057 435 275 14 5 416 9 415 7.03e-16 80.1
MS.gene005795.t1 AT5G44490 26.829 451 263 19 6 422 12 429 7.21e-16 80.1
MS.gene005795.t1 AT5G22660 25.995 427 267 15 10 411 12 414 9.08e-16 79.7
MS.gene005795.t1 AT3G03030 25.266 376 232 12 11 351 2 363 9.39e-16 79.7
MS.gene005795.t1 AT4G22280 30.484 351 215 11 10 351 1 331 1.64e-15 77.8
MS.gene005795.t1 AT5G56820 26.256 438 236 18 4 411 8 388 1.68e-15 79.0
MS.gene005795.t1 AT3G51530 26.761 426 265 16 10 421 29 421 1.85e-15 78.6
MS.gene005795.t1 AT5G56690 27.098 417 265 15 13 411 4 399 2.54e-15 78.2
MS.gene005795.t1 AT1G06630 29.609 358 220 13 10 351 11 352 2.69e-15 77.4
MS.gene005795.t1 AT1G06630 29.609 358 220 13 10 351 11 352 2.69e-15 77.4
MS.gene005795.t1 AT2G29930 29.396 364 209 16 10 351 11 348 3.05e-15 78.2
MS.gene005795.t1 AT2G29930 29.396 364 209 16 10 351 11 348 3.05e-15 78.2
MS.gene005795.t1 AT1G06630 29.526 359 219 14 10 351 11 352 3.81e-15 77.4
MS.gene005795.t1 AT1G06630 29.526 359 219 14 10 351 11 352 3.81e-15 77.4
MS.gene005795.t1 AT1G06630 29.526 359 219 14 10 351 11 352 3.81e-15 77.4
MS.gene005795.t1 AT1G06630 29.526 359 219 14 10 351 11 352 3.81e-15 77.4
MS.gene005795.t1 AT1G06630 29.526 359 219 14 10 351 11 352 5.45e-15 77.4
MS.gene005795.t1 AT1G06630 29.526 359 219 14 10 351 20 361 5.68e-15 77.0
MS.gene005795.t1 AT1G66310 26.535 456 274 17 5 432 13 435 6.49e-15 77.0
MS.gene005795.t1 AT3G58980 25.635 433 276 15 10 413 1 416 6.91e-15 77.4
MS.gene005795.t1 AT3G59000 24.439 446 273 16 11 413 2 426 8.94e-15 76.6
MS.gene005795.t1 AT5G22670 25.814 430 274 14 1 408 1 407 9.25e-15 76.6
MS.gene005795.t1 AT3G26920 26.761 355 217 15 93 429 4 333 1.09e-14 75.5
MS.gene005795.t1 AT3G26920 26.761 355 217 15 93 429 4 333 1.09e-14 75.5
MS.gene005795.t1 AT4G15060 25.882 425 240 19 8 395 23 409 1.13e-14 76.3
MS.gene005795.t1 AT1G05080 28.009 432 246 16 10 411 12 408 1.48e-14 75.9
MS.gene005795.t1 AT3G58900 25.000 448 267 17 11 413 2 425 1.56e-14 75.9
MS.gene005795.t1 AT1G69630 25.607 453 278 19 4 426 11 434 1.57e-14 75.9
MS.gene005795.t1 AT3G58920 25.926 378 230 12 11 351 2 366 1.68e-14 75.9
MS.gene005795.t1 AT2G26030 25.059 423 273 12 11 409 4 406 1.73e-14 75.9
MS.gene005795.t1 AT2G26030 25.059 423 273 12 11 409 4 406 1.73e-14 75.9
MS.gene005795.t1 AT1G13780 25.404 433 267 17 11 409 10 420 1.82e-14 75.9
MS.gene005795.t1 AT5G56390 26.066 422 264 15 11 413 2 394 1.89e-14 75.5
MS.gene005795.t1 AT1G66290 26.304 441 261 20 6 418 24 428 2.69e-14 75.1
MS.gene005795.t1 AT3G44060 27.920 351 219 16 16 350 4 336 2.97e-14 74.7
MS.gene005795.t1 AT3G42770 29.363 361 202 15 16 341 4 346 3.88e-14 75.1
MS.gene005795.t1 AT3G52680 29.640 361 198 14 9 350 19 342 4.72e-14 73.9
MS.gene005795.t1 AT3G56780 24.324 444 280 12 13 412 9 440 4.80e-14 74.3
MS.gene005795.t1 AT5G56560 26.559 433 257 20 8 418 2 395 1.47e-13 72.8
MS.gene005795.t1 AT5G18780 26.111 360 225 14 10 350 10 347 1.47e-13 72.4
MS.gene005795.t1 AT5G18780 26.111 360 225 14 10 350 10 347 1.47e-13 72.4
MS.gene005795.t1 AT5G41630 25.581 387 224 13 10 351 11 378 1.68e-13 72.8
MS.gene005795.t1 AT1G66320 24.362 431 272 15 6 411 25 426 1.73e-13 72.8
MS.gene005795.t1 AT2G26030 25.000 428 272 13 11 409 4 411 2.22e-13 72.4
MS.gene005795.t1 AT3G49030 26.024 415 244 16 10 413 20 382 2.29e-13 72.0
MS.gene005795.t1 AT3G03030 36.364 143 80 3 11 143 2 143 2.70e-13 71.2
MS.gene005795.t1 AT5G56700 28.613 346 216 13 77 413 29 352 2.71e-13 71.6
MS.gene005795.t1 AT5G18770 26.816 358 223 12 10 346 23 362 2.82e-13 71.6
MS.gene005795.t1 AT3G59240 26.648 364 230 13 10 352 7 354 3.34e-13 72.0
MS.gene005795.t1 AT1G66300 25.918 463 272 18 5 432 23 449 7.14e-13 70.9
MS.gene005795.t1 AT3G58930 24.935 385 228 12 11 351 2 369 8.07e-13 70.5
MS.gene005795.t1 AT3G58930 24.935 385 228 12 11 351 2 369 8.07e-13 70.5
MS.gene005795.t1 AT3G58930 24.935 385 228 12 11 351 2 369 8.07e-13 70.5
MS.gene005795.t1 AT5G22720 24.943 441 273 15 2 409 15 430 9.47e-13 70.5
MS.gene005795.t1 AT3G58880 25.729 377 223 11 11 354 3 355 1.17e-12 70.1
MS.gene005795.t1 AT1G55030 25.000 404 273 14 11 409 9 387 1.17e-12 70.1
MS.gene005795.t1 AT1G55030 25.000 404 273 14 11 409 19 397 1.18e-12 70.1
MS.gene005795.t1 AT4G15060 27.215 316 179 15 9 298 170 460 1.54e-12 70.1
MS.gene005795.t1 AT4G03220 23.714 447 289 15 11 411 24 464 1.56e-12 69.7
MS.gene005795.t1 AT5G27750 24.672 381 233 11 11 354 5 368 1.86e-12 68.9
MS.gene005795.t1 AT4G10410 26.807 332 156 12 25 349 1 252 2.13e-12 67.8
MS.gene005795.t1 AT3G26922 27.740 292 190 10 9 295 12 287 2.56e-12 67.8
MS.gene005795.t1 AT3G26922 27.740 292 190 10 9 295 12 287 2.56e-12 67.8
MS.gene005795.t1 AT2G29910 25.815 368 215 13 10 339 4 351 2.60e-12 68.6
MS.gene005795.t1 AT2G29910 25.815 368 215 13 10 339 4 351 2.60e-12 68.6
MS.gene005795.t1 AT2G29910 25.815 368 215 13 10 339 4 351 2.60e-12 68.6
MS.gene005795.t1 AT2G29910 25.815 368 215 13 10 339 4 351 2.60e-12 68.6
MS.gene005795.t1 AT4G13985 26.260 377 233 15 1 350 9 367 2.96e-12 68.9
MS.gene005795.t1 AT2G29910 25.815 368 215 13 10 339 28 375 4.05e-12 68.2
MS.gene005795.t1 AT1G78750 24.359 468 278 18 4 429 11 444 5.18e-12 68.2
MS.gene005795.t1 AT1G78750 24.359 468 278 18 4 429 11 444 5.18e-12 68.2
MS.gene005795.t1 AT5G22730 26.287 369 224 15 10 350 27 375 5.94e-12 67.4
MS.gene005795.t1 AT5G15620 25.833 360 231 11 10 351 1 342 6.90e-12 67.8
MS.gene005795.t1 AT5G38392 33.495 206 112 6 11 200 2 198 7.10e-12 65.1
MS.gene005795.t1 AT2G29910 26.453 344 204 11 10 322 4 329 9.26e-12 66.6
MS.gene005795.t1 AT2G29910 26.453 344 204 11 10 322 4 329 9.26e-12 66.6
MS.gene005795.t1 AT1G60400 25.753 365 244 12 11 363 14 363 1.19e-11 66.6
MS.gene005795.t1 AT3G49480 25.754 431 272 15 10 417 11 416 1.48e-11 66.6
MS.gene005795.t1 AT3G60040 27.056 377 216 15 10 351 229 581 1.82e-11 66.6
MS.gene005795.t1 AT3G60040 27.056 377 216 15 10 351 12 364 1.84e-11 66.6
MS.gene005795.t1 AT3G60040 27.056 377 216 15 10 351 232 584 2.19e-11 66.6
MS.gene005795.t1 AT3G60040 27.056 377 216 15 10 351 231 583 2.25e-11 66.6
MS.gene005795.t1 AT3G60040 27.056 377 216 15 10 351 231 583 2.27e-11 66.6
MS.gene005795.t1 AT1G80470 23.310 429 273 17 9 411 13 411 2.44e-11 65.9
MS.gene005795.t1 AT5G56810 29.249 253 144 9 11 247 15 248 3.12e-11 64.7
MS.gene005795.t1 AT5G22700 26.585 410 237 15 11 408 43 400 4.26e-11 65.1
MS.gene005795.t1 AT5G56570 23.981 417 278 14 8 418 33 416 4.74e-11 65.1
MS.gene005795.t1 AT1G26890 23.786 412 257 14 9 392 36 418 5.58e-11 64.7
MS.gene005795.t1 AT3G49020 25.058 431 286 16 9 430 20 422 8.38e-11 64.3
MS.gene005795.t1 AT3G44810 25.485 361 237 11 13 354 9 356 9.86e-11 63.9

Find 90 sgRNAs with CRISPR-Local

Find 115 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCACAATTTATCATCTTTA+TGG 0.083639 1.1:+66611447 MS.gene005795:CDS
TCTACTGGTTTGTTTGAATT+TGG 0.121921 1.1:-66612225 None:intergenic
ACAAATCCTCCGTCCTAATA+TGG 0.177207 1.1:+66612271 MS.gene005795:CDS
CAAGGTTGAGGAACTTGAAT+TGG 0.292646 1.1:+66610744 MS.gene005795:CDS
TAGAGTTGAACACAATAAAT+TGG 0.294013 1.1:-66610915 None:intergenic
AAGAGGTTGAAAACAAAGTT+TGG 0.294970 1.1:+66612055 MS.gene005795:CDS
TCACAATTTATCATCTTTAT+GGG 0.300522 1.1:+66611448 MS.gene005795:CDS
TTGAACGATTTATAATATAT+CGG 0.310061 1.1:-66612173 None:intergenic
ATGGCAAGATCCCTAAGTTT+TGG 0.321820 1.1:-66611527 None:intergenic
AAGTTAATATCTGGAGCAAT+AGG 0.345584 1.1:-66612422 None:intergenic
AAAGTCAAGGTTGGGGATCT+TGG 0.348543 1.1:-66610560 None:intergenic
GGTAATTCAAAGTCAAGGTT+GGG 0.367483 1.1:-66610568 None:intergenic
GCTCGTGGTCTTAAAATTGC+GGG 0.380788 1.1:+66610825 MS.gene005795:CDS
GTAAACTTCATACCCATATT+AGG 0.383168 1.1:-66612284 None:intergenic
AGTTTGTATTCACTCTTAAG+AGG 0.386556 1.1:+66611249 MS.gene005795:CDS
TCAAGTAAGCTTCTTTCTAC+TGG 0.389300 1.1:-66612240 None:intergenic
AGCCTAAGGGGCAATAAGAT+TGG 0.402731 1.1:-66610787 None:intergenic
TTTACATGACTGCATGAAAC+AGG 0.406869 1.1:+66611008 MS.gene005795:CDS
AAATATCCGAAAATTGTTGT+TGG 0.407540 1.1:+66611474 MS.gene005795:CDS
AGTTAATATCTGGAGCAATA+GGG 0.421254 1.1:-66612421 None:intergenic
GACATAGGGTCTGTAGTCTT+TGG 0.423895 1.1:-66610589 None:intergenic
ATCTTGATCTTCATCAGATT+CGG 0.426913 1.1:-66610428 None:intergenic
AAGAGTAGCTCGATTGAGAT+TGG 0.434112 1.1:-66611199 None:intergenic
GACCACGAGCGACTTAGAAA+TGG 0.441343 1.1:-66610812 None:intergenic
TGATGGTCAAAGTTAATATC+TGG 0.443718 1.1:-66612431 None:intergenic
ACCATATGATATGCACTTGT+GGG 0.445487 1.1:+66610702 MS.gene005795:CDS
CAAATCCTCCGTCCTAATAT+GGG 0.447942 1.1:+66612272 MS.gene005795:CDS
TACAGAATGCTCCAAAACTT+AGG 0.453885 1.1:+66611516 MS.gene005795:CDS
GGAGAGCTGCATATACAGAT+TGG 0.456055 1.1:-66610624 None:intergenic
ACAGAATGCTCCAAAACTTA+GGG 0.466812 1.1:+66611517 MS.gene005795:CDS
TGAACGATTTATAATATATC+GGG 0.470435 1.1:-66612172 None:intergenic
AGGAACTTGAATTGGATTGT+TGG 0.484585 1.1:+66610752 MS.gene005795:CDS
AGAGGTTGAAAACAAAGTTT+GGG 0.485976 1.1:+66612056 MS.gene005795:CDS
ACCCACAAGTGCATATCATA+TGG 0.486209 1.1:-66610703 None:intergenic
GTAGAAAGAAGCTTACTTGA+GGG 0.493554 1.1:+66612243 MS.gene005795:CDS
ACTTAGGGATCTTGCCATTG+AGG 0.495226 1.1:+66611532 MS.gene005795:CDS
TGGTAATTCAAAGTCAAGGT+TGG 0.495646 1.1:-66610569 None:intergenic
AATTTGCACTGGACAAATGT+TGG 0.499634 1.1:-66611100 None:intergenic
AATGAATACTCTCTTTAATG+AGG 0.503823 1.1:-66611052 None:intergenic
CTCTAAATTCAAAAGTAATG+AGG 0.506008 1.1:-66612116 None:intergenic
GGATTGCTTTGAACGACATA+GGG 0.506791 1.1:-66610603 None:intergenic
CAAATGTTGGACTCAACAAA+AGG 0.508165 1.1:-66611087 None:intergenic
TGGATTGCTTTGAACGACAT+AGG 0.509111 1.1:-66610604 None:intergenic
ACTTAGAAATGGAAAGCCTA+AGG 0.512993 1.1:-66610801 None:intergenic
AACCAATCTTATTGCCCCTT+AGG 0.520921 1.1:+66610785 MS.gene005795:CDS
TCGTTCAAGTAATTTGAAGA+AGG 0.521522 1.1:+66612188 MS.gene005795:CDS
TTGTAGATAGAACACTTGTT+CGG 0.523361 1.1:-66610519 None:intergenic
TCAAAACGTACAAACTGAGT+TGG 0.523905 1.1:+66612143 MS.gene005795:CDS
GATGGGGCATTAATTTGCAC+TGG 0.524036 1.1:-66611111 None:intergenic
CAAGTGTTCTATCTACAAGA+TGG 0.524434 1.1:+66610524 MS.gene005795:CDS
ATCTCGTTGTCGACATCTTG+AGG 0.524833 1.1:+66610978 MS.gene005795:CDS
TGAACACAATAAATTGGAGC+TGG 0.528466 1.1:-66610909 None:intergenic
AGCATTAGACCTCAAGGTTG+AGG 0.528928 1.1:+66610732 MS.gene005795:CDS
TTCAAAAGCATTAGACCTCA+AGG 0.530430 1.1:+66610726 MS.gene005795:CDS
CCGAAAACTTAAGAAAACTA+AGG 0.530981 1.1:+66610656 MS.gene005795:CDS
TCTTCGCATTTCTAAGCATG+TGG 0.534563 1.1:+66611218 MS.gene005795:CDS
TACGAAGAACATCAAGTGAT+GGG 0.535779 1.1:-66611128 None:intergenic
GTTAATATCTGGAGCAATAG+GGG 0.538194 1.1:-66612420 None:intergenic
AATATTCATACACACCTCAA+TGG 0.541265 1.1:-66611546 None:intergenic
CGCTCGTGGTCTTAAAATTG+CGG 0.545262 1.1:+66610824 MS.gene005795:CDS
GTAATTCAAAGTCAAGGTTG+GGG 0.549481 1.1:-66610567 None:intergenic
CTTAGAAATGGAAAGCCTAA+GGG 0.556919 1.1:-66610800 None:intergenic
TTCCATTTCTAAGTCGCTCG+TGG 0.557905 1.1:+66610810 MS.gene005795:CDS
CACCATATGATATGCACTTG+TGG 0.561872 1.1:+66610701 MS.gene005795:CDS
CTAAGGCTCTATAGTGACAA+TGG 0.568620 1.1:+66610673 MS.gene005795:CDS
ATGAATACTCTCTTTAATGA+GGG 0.572741 1.1:-66611051 None:intergenic
CAATAAGATTGGTTTCTCGA+TGG 0.573973 1.1:-66610776 None:intergenic
AAGTGTTCTATCTACAAGAT+GGG 0.574630 1.1:+66610525 MS.gene005795:CDS
AGCTGGAGAATCTTTAGTGA+CGG 0.576222 1.1:-66610892 None:intergenic
TATTGTGTTCAACTCTATCG+TGG 0.590909 1.1:+66610921 MS.gene005795:CDS
ATTCAAGTTCCTCAACCTTG+AGG 0.595725 1.1:-66610741 None:intergenic
TATTTGTTAGTATGATGTGT+GGG 0.597464 1.1:+66612375 MS.gene005795:intron
AGACATGTCGGAGTTTCAGA+TGG 0.606369 1.1:-66612084 None:intergenic
TCTTTGGTAATTCAAAGTCA+AGG 0.608733 1.1:-66610573 None:intergenic
TCTGGAGCAATAGGGGAGGG+TGG 0.609458 1.1:-66612413 None:intergenic
ATACGAAGAACATCAAGTGA+TGG 0.610166 1.1:-66611129 None:intergenic
GGTTGAAAACAAAGTTTGGG+TGG 0.610776 1.1:+66612059 MS.gene005795:CDS
AGTAGAAAGAAGCTTACTTG+AGG 0.634399 1.1:+66612242 MS.gene005795:CDS
AGGTTGTTTAAAAGACATGT+CGG 0.638005 1.1:-66612096 None:intergenic
TGTTAGTATGATGTGTGGGA+TGG 0.639262 1.1:+66612379 MS.gene005795:intron
ATATTTGTTAGTATGATGTG+TGG 0.644090 1.1:+66612374 MS.gene005795:intron
TAGAAAGAAGCTTACTTGAG+GGG 0.654250 1.1:+66612244 MS.gene005795:CDS
TTAGAAATGGAAAGCCTAAG+GGG 0.656773 1.1:-66610799 None:intergenic
CTCGTGGTCTTAAAATTGCG+GGG 0.659340 1.1:+66610826 MS.gene005795:CDS
ACTTCATACCCATATTAGGA+CGG 0.662848 1.1:-66612280 None:intergenic
AATATCTGGAGCAATAGGGG+AGG 0.666143 1.1:-66612417 None:intergenic
TATGCAGTTTCTAAGCATGG+AGG 0.674218 1.1:+66611394 MS.gene005795:intron
TCATACCCATATTAGGACGG+AGG 0.675321 1.1:-66612277 None:intergenic
ACGAAGAACATCAAGTGATG+GGG 0.677592 1.1:-66611127 None:intergenic
ATATCTGGAGCAATAGGGGA+GGG 0.678434 1.1:-66612416 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTTTTTTTTTTTTA+TGG - chr1.1:66611664-66611683 None:intergenic 0.0%
!! TAATGAAAAGTTATAATAAA+TGG + chr1.1:66611859-66611878 MS.gene005795:intron 10.0%
!!! TTTTTTTTTTTTTTATGGTT+GGG - chr1.1:66611659-66611678 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTTATGGT+TGG - chr1.1:66611660-66611679 None:intergenic 10.0%
!! ATAAAAAACTAACAAAAACA+TGG - chr1.1:66611930-66611949 None:intergenic 15.0%
!! GTATATAAATTCAAGTATTA+AGG - chr1.1:66612322-66612341 None:intergenic 15.0%
!! TTGAACGATTTATAATATAT+CGG - chr1.1:66612176-66612195 None:intergenic 15.0%
!!! ATATAGTTTTAATTGTGTAT+CGG - chr1.1:66611742-66611761 None:intergenic 15.0%
!!! TGCACAATTTTAAAAAAAAA+TGG + chr1.1:66611581-66611600 MS.gene005795:intron 15.0%
!!! TTTGTAAACTTATATTTTCT+GGG - chr1.1:66611174-66611193 None:intergenic 15.0%
!!! TTTTTTTTTTTTTATGGTTG+GGG - chr1.1:66611658-66611677 None:intergenic 15.0%
!! TCACAATTTATCATCTTTAT+GGG + chr1.1:66611448-66611467 MS.gene005795:CDS 20.0%
!! TGAACGATTTATAATATATC+GGG - chr1.1:66612175-66612194 None:intergenic 20.0%
!! TGCATATGAGTAAATAAATA+TGG - chr1.1:66611361-66611380 None:intergenic 20.0%
!! TTAATTACTACTACAAGTAT+AGG - chr1.1:66611769-66611788 None:intergenic 20.0%
!! TTCACAATTTATCATCTTTA+TGG + chr1.1:66611447-66611466 MS.gene005795:CDS 20.0%
!!! GTTTGTAAACTTATATTTTC+TGG - chr1.1:66611175-66611194 None:intergenic 20.0%
! AAATATCCGAAAATTGTTGT+TGG + chr1.1:66611474-66611493 MS.gene005795:CDS 25.0%
! AAGATTGAGCAAAAGATATT+TGG + chr1.1:66611701-66611720 MS.gene005795:intron 25.0%
! AATGAATACTCTCTTTAATG+AGG - chr1.1:66611055-66611074 None:intergenic 25.0%
! ATCATAGATAGTCTATATGA+CGG - chr1.1:66611803-66611822 None:intergenic 25.0%
! ATGAATACTCTCTTTAATGA+GGG - chr1.1:66611054-66611073 None:intergenic 25.0%
! CTCTAAATTCAAAAGTAATG+AGG - chr1.1:66612119-66612138 None:intergenic 25.0%
! GTAAACGATACCAAATATTA+TGG - chr1.1:66612013-66612032 None:intergenic 25.0%
! TAGAGTTGAACACAATAAAT+TGG - chr1.1:66610918-66610937 None:intergenic 25.0%
!! ATATTTGTTAGTATGATGTG+TGG + chr1.1:66612374-66612393 MS.gene005795:intron 25.0%
!! GAAGTTCTAACCATAATATT+TGG + chr1.1:66612000-66612019 MS.gene005795:intron 25.0%
!! TATTTGTTAGTATGATGTGT+GGG + chr1.1:66612375-66612394 MS.gene005795:intron 25.0%
!!! CCTTAGTTTTCTTAAGTTTT+CGG - chr1.1:66610659-66610678 None:intergenic 25.0%
!!! CTCATTACTTTTGAATTTAG+AGG + chr1.1:66612117-66612136 MS.gene005795:CDS 25.0%
AAGAGGTTGAAAACAAAGTT+TGG + chr1.1:66612055-66612074 MS.gene005795:CDS 30.0%
AAGTGTTCTATCTACAAGAT+GGG + chr1.1:66610525-66610544 MS.gene005795:CDS 30.0%
AATATTCATACACACCTCAA+TGG - chr1.1:66611549-66611568 None:intergenic 30.0%
AGAGGTTGAAAACAAAGTTT+GGG + chr1.1:66612056-66612075 MS.gene005795:CDS 30.0%
AGGTTGTTTAAAAGACATGT+CGG - chr1.1:66612099-66612118 None:intergenic 30.0%
AGTTTGTATTCACTCTTAAG+AGG + chr1.1:66611249-66611268 MS.gene005795:CDS 30.0%
ATCTTGATCTTCATCAGATT+CGG - chr1.1:66610431-66610450 None:intergenic 30.0%
CCGAAAACTTAAGAAAACTA+AGG + chr1.1:66610656-66610675 MS.gene005795:CDS 30.0%
GCTTCATGTATTGTTTACTT+GGG - chr1.1:66611956-66611975 None:intergenic 30.0%
GTAAACTTCATACCCATATT+AGG - chr1.1:66612287-66612306 None:intergenic 30.0%
TCGTTCAAGTAATTTGAAGA+AGG + chr1.1:66612188-66612207 MS.gene005795:CDS 30.0%
TGCTTCATGTATTGTTTACT+TGG - chr1.1:66611957-66611976 None:intergenic 30.0%
TTGTAGATAGAACACTTGTT+CGG - chr1.1:66610522-66610541 None:intergenic 30.0%
TTTATGAACGAGAGAATTGT+TGG + chr1.1:66612344-66612363 MS.gene005795:intron 30.0%
! CACATTCCAACAACAATTTT+CGG - chr1.1:66611483-66611502 None:intergenic 30.0%
! GAAAAAATTTGAAACCGAAG+AGG + chr1.1:66612038-66612057 MS.gene005795:intron 30.0%
! TCTTTGGTAATTCAAAGTCA+AGG - chr1.1:66610576-66610595 None:intergenic 30.0%
! TTTTATGCAGTTTCTAAGCA+TGG + chr1.1:66611391-66611410 MS.gene005795:intron 30.0%
!! TCTACTGGTTTGTTTGAATT+TGG - chr1.1:66612228-66612247 None:intergenic 30.0%
!!! AACTTTGTTTTCAACCTCTT+CGG - chr1.1:66612055-66612074 None:intergenic 30.0%
AATTTGCACTGGACAAATGT+TGG - chr1.1:66611103-66611122 None:intergenic 35.0%
ACAGAATGCTCCAAAACTTA+GGG + chr1.1:66611517-66611536 MS.gene005795:CDS 35.0%
ACCATATGATATGCACTTGT+GGG + chr1.1:66610702-66610721 MS.gene005795:CDS 35.0%
ACTTAGAAATGGAAAGCCTA+AGG - chr1.1:66610804-66610823 None:intergenic 35.0%
ACTTCATACCCATATTAGGA+CGG - chr1.1:66612283-66612302 None:intergenic 35.0%
AGGAACTTGAATTGGATTGT+TGG + chr1.1:66610752-66610771 MS.gene005795:CDS 35.0%
AGTAGAAAGAAGCTTACTTG+AGG + chr1.1:66612242-66612261 MS.gene005795:CDS 35.0%
ATACGAAGAACATCAAGTGA+TGG - chr1.1:66611132-66611151 None:intergenic 35.0%
CAAATGTTGGACTCAACAAA+AGG - chr1.1:66611090-66611109 None:intergenic 35.0%
CAAGTGTTCTATCTACAAGA+TGG + chr1.1:66610524-66610543 MS.gene005795:CDS 35.0%
CTTAGAAATGGAAAGCCTAA+GGG - chr1.1:66610803-66610822 None:intergenic 35.0%
GGTAATTCAAAGTCAAGGTT+GGG - chr1.1:66610571-66610590 None:intergenic 35.0%
GTAATTCAAAGTCAAGGTTG+GGG - chr1.1:66610570-66610589 None:intergenic 35.0%
GTAGAAAGAAGCTTACTTGA+GGG + chr1.1:66612243-66612262 MS.gene005795:CDS 35.0%
TACAGAATGCTCCAAAACTT+AGG + chr1.1:66611516-66611535 MS.gene005795:CDS 35.0%
TACGAAGAACATCAAGTGAT+GGG - chr1.1:66611131-66611150 None:intergenic 35.0%
TAGAAAGAAGCTTACTTGAG+GGG + chr1.1:66612244-66612263 MS.gene005795:CDS 35.0%
TATTGTGTTCAACTCTATCG+TGG + chr1.1:66610921-66610940 MS.gene005795:CDS 35.0%
TCAAAACGTACAAACTGAGT+TGG + chr1.1:66612143-66612162 MS.gene005795:CDS 35.0%
TCAAGTAAGCTTCTTTCTAC+TGG - chr1.1:66612243-66612262 None:intergenic 35.0%
TGAACACAATAAATTGGAGC+TGG - chr1.1:66610912-66610931 None:intergenic 35.0%
TGGTAATTCAAAGTCAAGGT+TGG - chr1.1:66610572-66610591 None:intergenic 35.0%
TTAGAAATGGAAAGCCTAAG+GGG - chr1.1:66610802-66610821 None:intergenic 35.0%
TTTACATGACTGCATGAAAC+AGG + chr1.1:66611008-66611027 MS.gene005795:CDS 35.0%
!! CAATAAGATTGGTTTCTCGA+TGG - chr1.1:66610779-66610798 None:intergenic 35.0%
!! TTCAAAAGCATTAGACCTCA+AGG + chr1.1:66610726-66610745 MS.gene005795:CDS 35.0%
AACCAATCTTATTGCCCCTT+AGG + chr1.1:66610785-66610804 MS.gene005795:CDS 40.0%
AAGAGTAGCTCGATTGAGAT+TGG - chr1.1:66611202-66611221 None:intergenic 40.0%
AATCTATCACAAGACGTTCG+AGG + chr1.1:66611626-66611645 MS.gene005795:intron 40.0%
ACAAATCCTCCGTCCTAATA+TGG + chr1.1:66612271-66612290 MS.gene005795:CDS 40.0%
ACCCACAAGTGCATATCATA+TGG - chr1.1:66610706-66610725 None:intergenic 40.0%
ACGAAGAACATCAAGTGATG+GGG - chr1.1:66611130-66611149 None:intergenic 40.0%
AGCTGGAGAATCTTTAGTGA+CGG - chr1.1:66610895-66610914 None:intergenic 40.0%
CAAATCCTCCGTCCTAATAT+GGG + chr1.1:66612272-66612291 MS.gene005795:CDS 40.0%
CAAGGTTGAGGAACTTGAAT+TGG + chr1.1:66610744-66610763 MS.gene005795:CDS 40.0%
CACCATATGATATGCACTTG+TGG + chr1.1:66610701-66610720 MS.gene005795:CDS 40.0%
CTAAGGCTCTATAGTGACAA+TGG + chr1.1:66610673-66610692 MS.gene005795:CDS 40.0%
GGTTGAAAACAAAGTTTGGG+TGG + chr1.1:66612059-66612078 MS.gene005795:CDS 40.0%
TATGCAGTTTCTAAGCATGG+AGG + chr1.1:66611394-66611413 MS.gene005795:intron 40.0%
TCTTCGCATTTCTAAGCATG+TGG + chr1.1:66611218-66611237 MS.gene005795:CDS 40.0%
TGTTAGTATGATGTGTGGGA+TGG + chr1.1:66612379-66612398 MS.gene005795:intron 40.0%
! ATGGCAAGATCCCTAAGTTT+TGG - chr1.1:66611530-66611549 None:intergenic 40.0%
! ATTCAAGTTCCTCAACCTTG+AGG - chr1.1:66610744-66610763 None:intergenic 40.0%
! GGATTGCTTTGAACGACATA+GGG - chr1.1:66610606-66610625 None:intergenic 40.0%
! TGGATTGCTTTGAACGACAT+AGG - chr1.1:66610607-66610626 None:intergenic 40.0%
!! GGTAAGACTCTTTTGTTGTC+AGG - chr1.1:66610501-66610520 None:intergenic 40.0%
!! TTAAGTTTTCGGTGCGTCTT+AGG - chr1.1:66610648-66610667 None:intergenic 40.0%
AAAGTCAAGGTTGGGGATCT+TGG - chr1.1:66610563-66610582 None:intergenic 45.0%
ACTTAGGGATCTTGCCATTG+AGG + chr1.1:66611532-66611551 MS.gene005795:CDS 45.0%
AGACATGTCGGAGTTTCAGA+TGG - chr1.1:66612087-66612106 None:intergenic 45.0%
AGCATTAGACCTCAAGGTTG+AGG + chr1.1:66610732-66610751 MS.gene005795:CDS 45.0%
AGCCTAAGGGGCAATAAGAT+TGG - chr1.1:66610790-66610809 None:intergenic 45.0%
ATCTCGTTGTCGACATCTTG+AGG + chr1.1:66610978-66610997 MS.gene005795:CDS 45.0%
GACATAGGGTCTGTAGTCTT+TGG - chr1.1:66610592-66610611 None:intergenic 45.0%
GGAGAGCTGCATATACAGAT+TGG - chr1.1:66610627-66610646 None:intergenic 45.0%
TCATACCCATATTAGGACGG+AGG - chr1.1:66612280-66612299 None:intergenic 45.0%
TTCCATTTCTAAGTCGCTCG+TGG + chr1.1:66610810-66610829 MS.gene005795:CDS 45.0%
! AATATCTGGAGCAATAGGGG+AGG - chr1.1:66612420-66612439 None:intergenic 45.0%
! ATATCTGGAGCAATAGGGGA+GGG - chr1.1:66612419-66612438 None:intergenic 45.0%
! CGCTCGTGGTCTTAAAATTG+CGG + chr1.1:66610824-66610843 MS.gene005795:CDS 45.0%
! CTCGTGGTCTTAAAATTGCG+GGG + chr1.1:66610826-66610845 MS.gene005795:CDS 45.0%
! GCTCGTGGTCTTAAAATTGC+GGG + chr1.1:66610825-66610844 MS.gene005795:CDS 45.0%
!! GATGGGGCATTAATTTGCAC+TGG - chr1.1:66611114-66611133 None:intergenic 45.0%
GACCACGAGCGACTTAGAAA+TGG - chr1.1:66610815-66610834 None:intergenic 50.0%
! TCTGGAGCAATAGGGGAGGG+TGG - chr1.1:66612416-66612435 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 66610418 66612441 66610418 ID=MS.gene005795
chr1.1 mRNA 66610418 66612441 66610418 ID=MS.gene005795.t1;Parent=MS.gene005795
chr1.1 exon 66610418 66611317 66610418 ID=MS.gene005795.t1.exon1;Parent=MS.gene005795.t1
chr1.1 CDS 66610418 66611317 66610418 ID=cds.MS.gene005795.t1;Parent=MS.gene005795.t1
chr1.1 exon 66611401 66611553 66611401 ID=MS.gene005795.t1.exon2;Parent=MS.gene005795.t1
chr1.1 CDS 66611401 66611553 66611401 ID=cds.MS.gene005795.t1;Parent=MS.gene005795.t1
chr1.1 exon 66612039 66612293 66612039 ID=MS.gene005795.t1.exon3;Parent=MS.gene005795.t1
chr1.1 CDS 66612039 66612293 66612039 ID=cds.MS.gene005795.t1;Parent=MS.gene005795.t1
chr1.1 exon 66612385 66612441 66612385 ID=MS.gene005795.t1.exon4;Parent=MS.gene005795.t1
chr1.1 CDS 66612385 66612441 66612385 ID=cds.MS.gene005795.t1;Parent=MS.gene005795.t1
Gene Sequence

>MS.gene005795

ATGGCATGCTCCGAATCTGATGAAGATCAAGATCGATTAAGCAATCTCGAAGACGAATTGATTATTCATATTTTGTCTTTCCTGACAACAAAAGAGTCTTACCGAACAAGTGTTCTATCTACAAGATGGGAGTCGATCTGCACCAAGATCCCCAACCTTGACTTTGAATTACCAAAGACTACAGACCCTATGTCGTTCAAAGCAATCCAATCTGTATATGCAGCTCTCCTAAGACGCACCGAAAACTTAAGAAAACTAAGGCTCTATAGTGACAATGGTTGCACACCATATGATATGCACTTGTGGGTTTCAAAAGCATTAGACCTCAAGGTTGAGGAACTTGAATTGGATTGTTGGTCCATCGAGAAACCAATCTTATTGCCCCTTAGGCTTTCCATTTCTAAGTCGCTCGTGGTCTTAAAATTGCGGGGCAGAACTCAGCTAAGACTTAATTCTTCGTCTGATGTGTGTTTTCCGTCACTAAAGATTCTCCAGCTCCAATTTATTGTGTTCAACTCTATCGTGGATGATCATAGTGAGTATGATCTCGCTAATTTTCTATCTCGTTGTCGACATCTTGAGGAATTTGTTTTACATGACTGCATGAAACAGGCAATCAATATTGTTTCTTTTCCCTCATTAAAGAGAGTATTCATTTGTTTATTTATGCCTTTTGTTGAGTCCAACATTTGTCCAGTGCAAATTAATGCCCCATCACTTGATGTTCTTCGTATTGTTGATACTTCATTTTCTCCCAGAAAATATAAGTTTACAAACTTGTCCAATCTCAATCGAGCTACTCTTCGCATTTCTAAGCATGTGGATTTTAACAGTTTGTATTCACTCTTAAGAGGACTTTCTAATGTTAAATCATTGACTATCAGTTCTGAAATTATTCATGTAAGTTTCATAATTTTTTTTATTTTTTTAATGATAAGTTCCATATTTATTTACTCATATGCAATACTTTTTTTTTTATGCAGTTTCTAAGCATGGAGGATAATATTGAAAATCTACATCTTCTCACTTTTCACAATTTATCATCTTTATGGGTTGAAATATCCGAAAATTGTTGTTGGAATGTGCTTGTTAGCATACTACAGAATGCTCCAAAACTTAGGGATCTTGCCATTGAGGTGTGTATGAATATTCTTTACTACATTTGCACAATTTTAAAAAAAAATGGTAAAATATATTAATAAGCTTAAAATCTATCACAAGACGTTCGAGGTTCAAACCCCAACCATAAAAAAAAAAAAAAAAAATCTATCACATGACGTGCAAAGATTGAGCAAAAGATATTTGGAATTTGCATATAAAACCGATACACAATTAAAACTATATTTAACCTATACTTGTAGTAGTAATTAAAATTAATTTAGCCGTCATATAGACTATCTATGATCTTAAAGTGAATAGATGTTTGCATGCATGCTAGTTCTAATGAAAAGTTATAATAAATGGTTCAGTAATTATAAGTTATTTATGATAAGATGCATTTAATAATATCCATGTTTTTGTTAGTTTTTTATTTGCCCAAGTAAACAATACATGAAGCAATCATGTGTCGTATATCAGTTGAGAAGTTCTAACCATAATATTTGGTATCGTTTACATGCAGAAAAAATTTGAAACCGAAGAGGTTGAAAACAAAGTTTGGGTGGAGCCATCTGAAACTCCGACATGTCTTTTAAACAACCTCATTACTTTTGAATTTAGAGGAATTCAAAACGTACAAACTGAGTTGGACTTTACCCGATATATTATAAATCGTTCAAGTAATTTGAAGAAGGTAAAGATTTTCACTCCAAATTCAAACAAACCAGTAGAAAGAAGCTTACTTGAGGGGTCAAACAAATCCTCCGTCCTAATATGGGTATGAAGTTTACACACTTTCTTTTCCTTAATACTTGAATTTATATACTTTTTATGAACGAGAGAATTGTTGGTATGTTAATATTTGTTAGTATGATGTGTGGGATGGTAATAGAACTTCCACCCTCCCCTATTGCTCCAGATATTAA

Protein sequence

>MS.gene005795.t1

MACSESDEDQDRLSNLEDELIIHILSFLTTKESYRTSVLSTRWESICTKIPNLDFELPKTTDPMSFKAIQSVYAALLRRTENLRKLRLYSDNGCTPYDMHLWVSKALDLKVEELELDCWSIEKPILLPLRLSISKSLVVLKLRGRTQLRLNSSSDVCFPSLKILQLQFIVFNSIVDDHSEYDLANFLSRCRHLEEFVLHDCMKQAINIVSFPSLKRVFICLFMPFVESNICPVQINAPSLDVLRIVDTSFSPRKYKFTNLSNLNRATLRISKHVDFNSLYSLLRGLSNVKSLTISSEIIHFLSMEDNIENLHLLTFHNLSSLWVEISENCCWNVLVSILQNAPKLRDLAIEKKFETEEVENKVWVEPSETPTCLLNNLITFEFRGIQNVQTELDFTRYIINRSSNLKKVKIFTPNSNKPVERSLLEGSNKSSVLIWYDVWDGNRTSTLPYCSRY