AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene03759


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03759.t1 MTR_4g056020 76.510 298 50 1 1 278 1 298 1.18e-157 447
MS.gene03759.t1 MTR_4g056030 73.154 298 60 1 1 278 1 298 3.00e-147 421
MS.gene03759.t1 MTR_4g056070 65.976 338 55 2 1 278 1 338 1.35e-144 413
MS.gene03759.t1 MTR_4g055580 67.463 335 51 5 1 278 92 425 1.75e-143 416
MS.gene03759.t1 MTR_4g056040 66.463 328 60 2 1 278 1 328 6.06e-142 409
MS.gene03759.t1 MTR_4g055990 66.269 335 56 3 1 278 1 335 2.44e-138 399
MS.gene03759.t1 MTR_4g055990 66.269 335 56 3 1 278 1 335 4.15e-138 399
MS.gene03759.t1 MTR_1g038710 60.855 304 93 3 1 278 11 314 1.02e-112 333
MS.gene03759.t1 MTR_1g090883 54.849 299 111 4 2 278 12 308 1.66e-97 291
MS.gene03759.t1 MTR_4g093690 56.031 257 106 5 1 253 10 263 5.56e-79 240
MS.gene03759.t1 MTR_1g090900 66.667 177 56 2 1 174 1 177 1.40e-71 219
MS.gene03759.t1 MTR_4g056010 86.869 99 13 0 69 167 2 100 6.85e-55 173
MS.gene03759.t1 MTR_7g110920 40.299 201 63 3 100 278 2 167 1.28e-33 125
MS.gene03759.t1 MTR_5g080710 37.788 217 114 8 9 215 33 238 4.10e-21 92.8
MS.gene03759.t1 MTR_1g041245 36.316 190 107 6 9 193 11 191 8.26e-21 91.3
MS.gene03759.t1 MTR_5g084070 37.963 216 117 9 5 215 9 212 1.47e-20 90.9
MS.gene03759.t1 MTR_8g014260 31.022 274 161 8 6 261 13 276 1.10e-19 88.6
MS.gene03759.t1 MTR_8g467800 31.613 310 162 9 5 278 16 311 2.37e-19 86.7
MS.gene03759.t1 MTR_8g467800 31.310 313 165 9 5 281 16 314 9.19e-19 85.9
MS.gene03759.t1 MTR_8g445780 30.142 282 162 8 7 272 11 273 1.03e-17 82.4
MS.gene03759.t1 MTR_8g062310 36.139 202 105 11 9 204 25 208 5.53e-17 80.9
MS.gene03759.t1 MTR_3g107100 34.184 196 112 7 5 193 7 192 9.58e-17 79.7
MS.gene03759.t1 MTR_7g034115 36.269 193 103 7 9 193 11 191 9.94e-17 79.7
MS.gene03759.t1 MTR_3g108560 36.598 194 109 7 6 198 17 197 1.01e-16 79.0
MS.gene03759.t1 MTR_7g098570 36.458 192 103 7 9 193 20 199 1.16e-16 80.1
MS.gene03759.t1 MTR_4g032730 33.071 254 135 13 9 241 15 254 1.44e-16 79.7
MS.gene03759.t1 MTR_8g062270 29.137 278 162 10 9 265 16 279 1.45e-16 79.7
MS.gene03759.t1 MTR_3g108560 36.598 194 109 7 6 198 17 197 1.55e-16 79.3
MS.gene03759.t1 MTR_2g083840 32.281 285 145 13 9 267 21 283 1.62e-16 79.3
MS.gene03759.t1 MTR_8g469020 32.129 249 137 12 9 233 7 247 2.22e-16 79.0
MS.gene03759.t1 MTR_5g073420 32.308 195 112 6 9 193 11 195 2.58e-16 78.6
MS.gene03759.t1 MTR_0492s0020 35.354 198 102 9 9 199 86 264 2.75e-16 78.6
MS.gene03759.t1 MTR_6g022360 32.836 201 111 6 3 199 37 217 3.03e-16 78.6
MS.gene03759.t1 MTR_0543s0010 35.354 198 102 9 9 199 86 264 3.31e-16 78.6
MS.gene03759.t1 MTR_8g014160 34.286 210 112 6 2 193 34 235 4.13e-16 78.2
MS.gene03759.t1 MTR_7g007080 33.168 202 106 8 7 193 2 189 7.89e-16 77.0
MS.gene03759.t1 MTR_7g032380 32.461 191 113 6 9 193 11 191 1.74e-15 75.9
MS.gene03759.t1 MTR_5g045510 34.359 195 103 12 9 193 12 191 3.03e-15 75.5
MS.gene03759.t1 MTR_8g468760 30.034 293 166 12 1 270 1 277 3.08e-15 75.5
MS.gene03759.t1 MTR_1g013560 30.476 210 125 5 1 198 11 211 3.24e-15 75.1
MS.gene03759.t1 MTR_6g011460 32.093 215 123 7 9 213 46 247 3.98e-15 75.1
MS.gene03759.t1 MTR_7g115270 32.673 202 116 7 9 198 12 205 4.31e-15 75.1
MS.gene03759.t1 MTR_1g013560 30.476 210 125 5 1 198 11 211 4.42e-15 75.1
MS.gene03759.t1 MTR_8g468810 29.412 289 157 11 4 267 20 286 5.81e-15 74.3
MS.gene03759.t1 MTR_8g085430 31.683 202 107 6 9 193 11 198 6.63e-15 73.9
MS.gene03759.t1 MTR_8g468810 29.412 289 157 11 4 267 20 286 7.29e-15 73.9
MS.gene03759.t1 MTR_8g468810 29.412 289 157 11 4 267 20 286 7.38e-15 73.9
MS.gene03759.t1 MTR_8g468810 29.412 289 157 11 4 267 20 286 1.08e-14 73.6
MS.gene03759.t1 MTR_7g098510 28.627 255 148 6 9 247 18 254 1.12e-14 73.9
MS.gene03759.t1 MTR_8g468810 29.412 289 157 11 4 267 20 286 1.14e-14 73.9
MS.gene03759.t1 MTR_4g050930 31.641 256 152 10 6 252 26 267 1.39e-14 73.6
MS.gene03759.t1 MTR_1g053025 32.353 204 117 8 9 199 2 197 1.68e-14 73.2
MS.gene03759.t1 MTR_8g062010 33.168 202 113 7 1 191 1 191 1.79e-14 73.2
MS.gene03759.t1 MTR_7g033945 36.095 169 90 6 9 165 11 173 1.92e-14 70.5
MS.gene03759.t1 MTR_8g058970 28.763 299 163 10 4 267 14 297 2.12e-14 73.2
MS.gene03759.t1 MTR_7g055943 31.373 204 121 7 3 198 34 226 2.52e-14 72.8
MS.gene03759.t1 MTR_4g050930 31.641 256 152 10 6 252 26 267 2.75e-14 72.8
MS.gene03759.t1 MTR_7g033915 32.035 231 122 11 9 232 11 213 3.07e-14 72.4
MS.gene03759.t1 MTR_2g005990 31.884 207 117 8 9 198 6 205 3.58e-14 72.4
MS.gene03759.t1 MTR_4g039440 33.673 196 110 8 9 198 34 215 3.59e-14 72.4
MS.gene03759.t1 MTR_2g007500 33.000 200 101 7 9 198 14 190 4.42e-14 71.6
MS.gene03759.t1 MTR_7g034110 30.348 201 129 6 9 204 11 205 6.61e-14 71.2
MS.gene03759.t1 MTR_4g045680 31.317 281 163 12 6 275 13 274 7.66e-14 71.2
MS.gene03759.t1 MTR_5g061680 34.359 195 106 9 9 193 11 193 1.90e-13 69.7
MS.gene03759.t1 MTR_4g047950 31.522 184 119 5 5 183 9 190 1.97e-13 70.1
MS.gene03759.t1 MTR_8g070950 33.503 197 111 6 6 193 12 197 2.00e-13 70.1
MS.gene03759.t1 MTR_3g107160 30.198 202 121 5 2 193 3 194 2.56e-13 69.7
MS.gene03759.t1 MTR_7g033990 28.500 200 124 5 9 199 11 200 2.95e-13 69.7
MS.gene03759.t1 MTR_7g056447 35.323 201 112 9 1 195 1 189 2.98e-13 68.9
MS.gene03759.t1 MTR_6g045333 33.673 196 108 9 9 193 61 245 3.27e-13 69.7
MS.gene03759.t1 MTR_6g022500 33.010 206 119 10 9 206 101 295 3.29e-13 69.7
MS.gene03759.t1 MTR_7g007340 33.333 195 104 5 4 198 8 176 3.96e-13 68.9
MS.gene03759.t1 MTR_1g066830 31.250 192 114 8 9 193 8 188 5.57e-13 68.6
MS.gene03759.t1 MTR_5g007410 32.836 201 96 11 11 193 28 207 6.16e-13 68.9
MS.gene03759.t1 MTR_3g040700 31.414 191 117 5 9 193 43 225 6.67e-13 68.6
MS.gene03759.t1 MTR_3g108150 33.333 192 115 7 7 196 11 191 6.68e-13 68.6
MS.gene03759.t1 MTR_2g047848 31.754 211 115 8 4 198 2 199 7.50e-13 68.6
MS.gene03759.t1 MTR_1g021820 34.314 204 112 8 4 197 23 214 8.84e-13 68.2
MS.gene03759.t1 MTR_1g085120 31.658 199 117 8 9 199 179 366 1.26e-12 67.8
MS.gene03759.t1 MTR_7g026500 31.100 209 116 9 8 200 13 209 1.41e-12 67.8
MS.gene03759.t1 MTR_3g036250 31.532 222 131 5 6 218 2 211 1.45e-12 67.4
MS.gene03759.t1 MTR_1g085120 31.658 199 117 8 9 199 167 354 1.70e-12 67.8
MS.gene03759.t1 MTR_7g056433 32.500 200 119 8 4 196 7 197 1.71e-12 67.4
MS.gene03759.t1 MTR_1g085120 31.658 199 117 8 9 199 92 279 1.83e-12 67.4
MS.gene03759.t1 MTR_7g084080 31.694 183 108 7 4 176 12 187 2.55e-12 66.2
MS.gene03759.t1 MTR_1g108820 32.161 199 117 8 9 202 8 193 2.85e-12 66.6
MS.gene03759.t1 MTR_3g048290 25.987 304 180 10 5 271 19 314 3.32e-12 66.6
MS.gene03759.t1 MTR_8g017280 31.222 221 127 7 7 219 34 237 6.12e-12 65.1
MS.gene03759.t1 MTR_1g021825 30.500 200 120 5 4 195 83 271 6.35e-12 65.9
MS.gene03759.t1 MTR_2g007400 31.579 209 118 8 9 199 12 213 7.41e-12 65.5
MS.gene03759.t1 MTR_1g108820 32.161 199 117 8 9 202 8 193 7.52e-12 65.5
MS.gene03759.t1 MTR_1g021825 30.500 200 120 5 4 195 12 200 9.08e-12 65.1
MS.gene03759.t1 MTR_8g017280 31.364 220 126 7 8 219 35 237 1.11e-11 65.1
MS.gene03759.t1 MTR_3g107120 31.604 212 116 6 1 193 1 202 1.14e-11 64.7
MS.gene03759.t1 MTR_8g058965 32.857 210 120 10 9 200 13 219 1.49e-11 64.7
MS.gene03759.t1 MTR_1g107385 33.816 207 107 8 9 193 32 230 1.83e-11 64.3
MS.gene03759.t1 MTR_2g036470 27.305 282 164 13 9 270 14 274 1.97e-11 64.3
MS.gene03759.t1 MTR_5g040850 31.100 209 119 7 4 198 2 199 1.99e-11 64.3
MS.gene03759.t1 MTR_7g110910 81.579 38 7 0 1 38 158 195 2.83e-11 62.0
MS.gene03759.t1 MTR_7g021630 30.918 207 103 8 6 192 14 200 4.10e-11 63.2
MS.gene03759.t1 MTR_7g021630 30.918 207 103 8 6 192 14 200 4.51e-11 62.8
MS.gene03759.t1 MTR_1g014450 31.100 209 120 8 4 198 11 209 4.62e-11 63.2
MS.gene03759.t1 MTR_8g468840 27.857 280 164 11 8 265 13 276 5.05e-11 63.2
MS.gene03759.t1 MTR_1089s0010 32.828 198 109 9 6 193 5 188 5.15e-11 62.8
MS.gene03759.t1 MTR_1g115245 31.548 168 105 3 4 163 21 186 5.42e-11 62.4
MS.gene03759.t1 MTR_2g082800 33.333 183 113 6 4 181 22 200 5.73e-11 62.8
MS.gene03759.t1 MTR_3g023630 31.053 190 117 6 9 193 8 188 5.79e-11 62.8
MS.gene03759.t1 MTR_5g008950 31.980 197 97 9 11 193 1 174 6.15e-11 62.8
MS.gene03759.t1 MTR_1g013840 31.472 197 108 8 7 187 54 239 6.78e-11 62.8
MS.gene03759.t1 MTR_7g075820 29.954 217 122 8 9 201 6 216 7.85e-11 62.4
MS.gene03759.t1 MTR_3g099900 32.000 175 100 6 6 169 15 181 8.08e-11 62.4
MS.gene03759.t1 MTR_7g060470 29.500 200 110 6 9 193 3 186 8.35e-11 62.4
MS.gene03759.t1 MTR_4g134150 27.957 186 122 5 8 193 13 186 8.88e-11 60.8
MS.gene03759.t1 MTR_3g071850 30.348 201 122 6 9 200 24 215 9.20e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03759.t1 AT4G14103 30.323 310 169 9 9 278 8 310 1.42e-24 102
MS.gene03759.t1 AT4G14103 30.323 310 169 9 9 278 8 310 1.42e-24 102
MS.gene03759.t1 AT4G14103 30.225 311 170 9 8 278 7 310 2.41e-24 102
MS.gene03759.t1 AT4G14096 31.939 263 144 10 8 253 7 251 6.37e-22 95.1
MS.gene03759.t1 AT4G14096 31.939 263 144 10 8 253 7 251 6.37e-22 95.1
MS.gene03759.t1 AT3G50710 32.197 264 137 13 9 252 2 243 6.22e-21 92.0
MS.gene03759.t1 AT4G13960 32.075 265 148 7 9 261 2 246 8.95e-21 92.0
MS.gene03759.t1 AT4G13960 32.075 265 148 7 9 261 2 246 8.95e-21 92.0
MS.gene03759.t1 AT3G59210 32.453 265 150 10 5 253 3 254 3.98e-20 90.1
MS.gene03759.t1 AT3G59210 32.453 265 150 10 5 253 3 254 3.98e-20 90.1
MS.gene03759.t1 AT3G59210 32.453 265 150 10 5 253 3 254 3.98e-20 90.1
MS.gene03759.t1 AT3G59210 32.453 265 150 10 5 253 3 254 3.98e-20 90.1
MS.gene03759.t1 AT3G59210 32.453 265 150 10 5 253 3 254 3.98e-20 90.1
MS.gene03759.t1 AT3G59190 30.041 243 132 6 9 241 12 226 4.61e-20 89.4
MS.gene03759.t1 AT3G59190 30.041 243 132 7 9 241 12 226 9.96e-20 89.0
MS.gene03759.t1 AT3G59230 33.921 227 118 6 9 213 12 228 1.34e-19 88.6
MS.gene03759.t1 AT3G59160 30.000 290 144 12 9 253 13 288 2.37e-19 87.8
MS.gene03759.t1 AT1G55660 34.010 197 114 7 9 197 53 241 3.64e-19 86.7
MS.gene03759.t1 AT4G00315 36.224 196 109 7 9 196 2 189 5.18e-19 86.7
MS.gene03759.t1 AT1G55660 34.184 196 113 7 9 196 53 240 1.05e-18 85.9
MS.gene03759.t1 AT1G58310 33.333 231 122 5 9 213 8 232 1.91e-18 85.1
MS.gene03759.t1 AT1G51370 35.567 194 103 7 7 195 17 193 1.07e-17 82.0
MS.gene03759.t1 AT5G56380 31.884 276 149 10 9 255 2 267 1.88e-17 82.0
MS.gene03759.t1 AT5G56380 31.884 276 149 10 9 255 2 267 1.88e-17 82.0
MS.gene03759.t1 AT1G51370 34.536 194 105 6 7 195 17 193 2.57e-17 81.6
MS.gene03759.t1 AT1G51370 34.536 194 105 6 7 195 17 193 2.81e-17 81.6
MS.gene03759.t1 AT5G41830 33.962 212 113 6 3 195 7 210 6.30e-17 80.9
MS.gene03759.t1 AT3G58920 31.970 269 149 10 9 253 2 260 1.17e-16 80.1
MS.gene03759.t1 AT5G38590 29.310 290 167 10 9 274 2 277 1.25e-16 78.6
MS.gene03759.t1 AT4G15060 32.184 261 141 11 6 248 23 265 1.30e-16 79.7
MS.gene03759.t1 AT5G56440 31.418 261 150 10 9 252 2 250 2.24e-16 79.0
MS.gene03759.t1 AT5G22670 35.751 193 102 8 8 193 10 187 2.36e-16 79.0
MS.gene03759.t1 AT3G58860 33.500 200 115 6 6 195 4 195 2.38e-16 79.0
MS.gene03759.t1 AT5G38590 29.412 289 166 10 9 273 2 276 3.26e-16 78.6
MS.gene03759.t1 AT5G41840 31.760 233 123 8 9 213 14 238 3.33e-16 78.6
MS.gene03759.t1 AT3G03040 31.599 269 140 9 9 253 2 250 3.58e-16 78.6
MS.gene03759.t1 AT3G03030 33.663 202 110 6 9 195 2 194 4.16e-16 77.4
MS.gene03759.t1 AT5G53840 30.169 295 167 12 7 275 16 297 5.85e-16 77.8
MS.gene03759.t1 AT5G38392 34.975 203 116 6 9 199 2 200 6.50e-16 75.1
MS.gene03759.t1 AT4G00320 32.558 215 112 7 3 195 7 210 6.87e-16 77.8
MS.gene03759.t1 AT4G15060 31.923 260 141 11 7 248 170 411 7.70e-16 77.8
MS.gene03759.t1 AT3G03030 33.663 202 110 6 9 195 2 194 8.37e-16 77.4
MS.gene03759.t1 AT3G59200 33.659 205 110 9 8 198 6 198 9.11e-16 77.0
MS.gene03759.t1 AT5G56400 31.641 256 151 10 9 252 33 276 1.31e-15 76.6
MS.gene03759.t1 AT4G10400 34.375 192 114 7 9 196 2 185 1.67e-15 76.3
MS.gene03759.t1 AT4G10400 34.375 192 114 7 9 196 2 185 1.67e-15 76.3
MS.gene03759.t1 AT4G10400 34.375 192 114 7 9 196 2 185 1.67e-15 76.3
MS.gene03759.t1 AT4G22280 38.298 188 104 7 9 193 2 180 2.65e-15 75.1
MS.gene03759.t1 AT5G38396 30.916 262 154 9 9 253 2 253 2.76e-15 75.9
MS.gene03759.t1 AT3G59200 33.659 205 110 9 8 198 6 198 4.20e-15 75.5
MS.gene03759.t1 AT4G09920 32.984 191 116 6 9 195 2 184 4.76e-15 74.3
MS.gene03759.t1 AT4G09920 32.984 191 116 6 9 195 2 184 4.76e-15 74.3
MS.gene03759.t1 AT4G26340 31.020 245 140 9 9 241 2 229 4.88e-15 75.1
MS.gene03759.t1 AT4G09920 32.984 191 116 6 9 195 2 184 5.60e-15 73.9
MS.gene03759.t1 AT4G09920 32.984 191 116 6 9 195 2 184 5.60e-15 73.9
MS.gene03759.t1 AT4G09920 32.984 191 116 6 9 195 2 184 5.60e-15 73.9
MS.gene03759.t1 AT4G22280 33.871 248 143 9 9 252 2 232 6.10e-15 74.7
MS.gene03759.t1 AT5G60610 34.555 191 110 7 9 196 2 180 6.43e-15 74.3
MS.gene03759.t1 AT5G60610 34.555 191 110 7 9 196 2 180 6.43e-15 74.3
MS.gene03759.t1 AT3G44060 34.450 209 118 10 14 213 4 202 7.01e-15 74.7
MS.gene03759.t1 AT2G26030 31.088 193 116 7 9 195 4 185 1.16e-14 73.9
MS.gene03759.t1 AT2G26030 31.088 193 116 7 9 195 4 185 1.16e-14 73.9
MS.gene03759.t1 AT2G26030 31.088 193 116 7 9 195 4 185 1.37e-14 73.9
MS.gene03759.t1 AT2G42720 36.000 200 110 10 9 197 2 194 1.37e-14 73.9
MS.gene03759.t1 AT3G58900 30.534 262 152 8 9 253 2 250 1.46e-14 73.2
MS.gene03759.t1 AT3G58900 30.534 262 152 8 9 253 2 250 1.46e-14 73.2
MS.gene03759.t1 AT3G58900 30.534 262 152 8 9 253 2 250 1.71e-14 72.8
MS.gene03759.t1 AT3G56780 32.632 190 110 7 11 195 9 185 1.90e-14 73.2
MS.gene03759.t1 AT1G06630 28.479 309 172 10 8 280 11 306 2.85e-14 72.4
MS.gene03759.t1 AT1G06630 28.479 309 172 10 8 280 11 306 2.85e-14 72.4
MS.gene03759.t1 AT1G06630 30.916 262 152 9 8 253 11 259 2.94e-14 72.0
MS.gene03759.t1 AT3G56780 32.632 190 110 7 11 195 9 185 3.11e-14 72.8
MS.gene03759.t1 AT3G58900 30.534 262 152 8 9 253 2 250 3.31e-14 72.8
MS.gene03759.t1 AT1G06630 28.479 309 172 10 8 280 20 315 3.57e-14 72.4
MS.gene03759.t1 AT3G56780 32.632 190 110 7 11 195 9 185 3.66e-14 72.4
MS.gene03759.t1 AT1G06630 28.479 309 172 10 8 280 11 306 3.85e-14 72.4
MS.gene03759.t1 AT1G06630 28.479 309 172 10 8 280 11 306 3.85e-14 72.4
MS.gene03759.t1 AT1G06630 28.479 309 172 10 8 280 11 306 3.85e-14 72.4
MS.gene03759.t1 AT1G06630 28.479 309 172 10 8 280 11 306 3.85e-14 72.4
MS.gene03759.t1 AT1G16930 34.826 201 97 9 9 195 15 195 4.29e-14 72.4
MS.gene03759.t1 AT1G16930 34.826 201 97 9 9 195 15 195 4.29e-14 72.4
MS.gene03759.t1 AT1G16930 34.826 201 97 9 9 195 15 195 4.29e-14 72.4
MS.gene03759.t1 AT4G00160 32.549 255 142 9 9 247 16 256 5.20e-14 72.0
MS.gene03759.t1 AT5G22700 33.663 202 108 7 9 201 6 190 7.45e-14 71.6
MS.gene03759.t1 AT5G22700 33.663 202 108 7 9 201 6 190 7.45e-14 71.6
MS.gene03759.t1 AT5G22700 33.663 202 108 7 9 201 6 190 7.45e-14 71.6
MS.gene03759.t1 AT5G22700 33.663 202 108 7 9 201 6 190 7.45e-14 71.6
MS.gene03759.t1 AT5G22700 33.663 202 108 7 9 201 43 227 7.61e-14 71.6
MS.gene03759.t1 AT5G22700 33.663 202 108 7 9 201 43 227 8.19e-14 71.2
MS.gene03759.t1 AT3G58880 28.931 318 165 10 9 278 3 307 1.07e-13 71.2
MS.gene03759.t1 AT4G26350 31.633 196 111 6 9 195 2 183 1.90e-13 70.5
MS.gene03759.t1 AT3G58960 32.474 194 111 7 9 193 2 184 1.91e-13 70.5
MS.gene03759.t1 AT3G59000 33.728 169 97 5 9 163 2 169 2.21e-13 70.1
MS.gene03759.t1 AT3G42770 29.503 322 142 14 14 279 4 296 2.47e-13 70.1
MS.gene03759.t1 AT3G59000 37.500 128 69 4 9 126 2 128 2.52e-13 69.7
MS.gene03759.t1 AT2G29910 27.900 319 172 12 8 277 4 313 2.54e-13 69.3
MS.gene03759.t1 AT2G29910 27.900 319 172 12 8 277 4 313 2.54e-13 69.3
MS.gene03759.t1 AT2G29910 27.900 319 172 12 8 277 4 313 3.43e-13 69.3
MS.gene03759.t1 AT2G29910 27.900 319 172 12 8 277 4 313 3.43e-13 69.3
MS.gene03759.t1 AT2G29910 27.900 319 172 12 8 277 4 313 3.43e-13 69.3
MS.gene03759.t1 AT2G29910 27.900 319 172 12 8 277 4 313 3.43e-13 69.3
MS.gene03759.t1 AT3G62440 29.259 270 146 11 9 249 2 255 3.56e-13 69.7
MS.gene03759.t1 AT5G56420 34.375 192 113 8 8 195 5 187 3.97e-13 69.3
MS.gene03759.t1 AT5G56420 34.375 192 113 8 8 195 5 187 3.97e-13 69.3
MS.gene03759.t1 AT5G56420 34.375 192 113 8 8 195 5 187 3.97e-13 69.3
MS.gene03759.t1 AT2G29910 27.900 319 172 12 8 277 28 337 4.30e-13 68.9
MS.gene03759.t1 AT1G69630 26.183 317 183 8 2 278 11 316 4.88e-13 69.3
MS.gene03759.t1 AT1G78760 30.204 245 148 10 7 241 14 245 5.12e-13 68.9
MS.gene03759.t1 AT5G53635 35.079 191 103 9 11 193 2 179 5.44e-13 68.9
MS.gene03759.t1 AT1G52650 31.500 200 112 6 9 195 2 189 6.91e-13 68.9
MS.gene03759.t1 AT1G32375 30.620 258 144 12 9 247 2 243 7.40e-13 68.6
MS.gene03759.t1 AT1G32375 30.620 258 144 12 9 247 2 243 7.40e-13 68.6
MS.gene03759.t1 AT3G58980 30.093 216 136 6 9 215 2 211 8.06e-13 68.6
MS.gene03759.t1 AT3G52680 34.872 195 107 7 9 195 21 203 8.21e-13 68.2
MS.gene03759.t1 AT5G53640 30.526 190 116 7 7 193 20 196 9.91e-13 66.6
MS.gene03759.t1 AT3G58820 28.819 288 161 9 9 272 2 269 1.36e-12 67.8
MS.gene03759.t1 AT5G18780 34.118 170 88 6 9 167 11 167 1.41e-12 67.4
MS.gene03759.t1 AT5G18780 34.118 170 88 6 9 167 11 167 1.41e-12 67.4
MS.gene03759.t1 AT5G38570 27.143 280 139 10 9 274 2 230 1.45e-12 67.4
MS.gene03759.t1 AT5G44950 31.606 193 113 7 8 193 3 183 1.83e-12 67.4
MS.gene03759.t1 AT5G22720 32.487 197 115 7 4 193 18 203 1.98e-12 67.4
MS.gene03759.t1 AT5G22730 30.244 205 124 7 8 205 27 219 2.34e-12 67.0
MS.gene03759.t1 AT5G25850 32.323 198 112 8 9 200 20 201 2.38e-12 67.0
MS.gene03759.t1 AT3G52680 35.025 197 106 8 8 195 20 203 2.42e-12 67.0
MS.gene03759.t1 AT5G44490 30.348 201 116 6 4 193 12 199 2.44e-12 67.0
MS.gene03759.t1 AT5G56370 33.690 187 110 7 9 191 2 178 2.67e-12 66.2
MS.gene03759.t1 AT2G26860 33.679 193 112 6 9 193 2 186 2.84e-12 66.6
MS.gene03759.t1 AT2G26860 33.679 193 112 6 9 193 2 186 2.84e-12 66.6
MS.gene03759.t1 AT5G18780 34.503 171 88 6 8 167 10 167 2.95e-12 66.6
MS.gene03759.t1 AT5G18780 34.503 171 88 6 8 167 10 167 2.95e-12 66.6
MS.gene03759.t1 AT5G44490 30.846 201 115 6 4 193 12 199 3.05e-12 67.0
MS.gene03759.t1 AT2G42730 27.969 261 157 10 9 252 5 251 3.93e-12 66.6
MS.gene03759.t1 AT5G22730 30.244 205 124 7 8 205 27 219 4.09e-12 66.6
MS.gene03759.t1 AT5G22730 30.244 205 124 7 8 205 27 219 4.09e-12 66.6
MS.gene03759.t1 AT5G56370 34.759 187 108 8 9 191 2 178 5.96e-12 65.9
MS.gene03759.t1 AT5G56370 34.759 187 108 8 9 191 2 178 5.96e-12 65.9
MS.gene03759.t1 AT5G38590 30.263 152 101 3 9 155 2 153 6.56e-12 65.1
MS.gene03759.t1 AT5G56810 29.804 255 152 10 9 248 15 257 6.78e-12 65.1
MS.gene03759.t1 AT5G56810 29.804 255 152 10 9 248 15 257 8.95e-12 65.5
MS.gene03759.t1 AT1G66300 31.658 199 115 7 4 195 24 208 9.88e-12 65.1
MS.gene03759.t1 AT3G59240 27.957 279 174 10 9 276 8 270 1.03e-11 65.5
MS.gene03759.t1 AT5G38386 23.841 302 149 8 9 278 2 254 1.20e-11 64.7
MS.gene03759.t1 AT5G38386 23.841 302 149 8 9 278 2 254 1.20e-11 64.7
MS.gene03759.t1 AT5G56410 28.328 293 164 13 9 268 2 281 1.44e-11 64.7
MS.gene03759.t1 AT5G22610 33.000 200 116 7 8 198 17 207 1.69e-11 64.7
MS.gene03759.t1 AT3G59150 31.220 205 113 9 9 197 13 205 1.90e-11 64.3
MS.gene03759.t1 AT5G22610 33.000 200 116 7 8 198 17 207 2.15e-11 64.3
MS.gene03759.t1 AT1G66310 25.080 311 184 8 4 278 14 311 2.55e-11 63.9
MS.gene03759.t1 AT5G41630 29.902 204 118 4 9 195 12 207 2.82e-11 63.9
MS.gene03759.t1 AT5G38390 32.487 197 110 9 9 199 2 181 4.61e-11 63.2
MS.gene03759.t1 AT2G04230 30.364 247 150 8 8 241 12 249 5.37e-11 63.2

Find 44 sgRNAs with CRISPR-Local

Find 70 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCACAAATTTGATTTCTT+TGG 0.190993 4.3:-45223492 None:intergenic
TCTATCTGGTTGTCCACATT+TGG 0.307537 4.3:+45223850 MS.gene03759:CDS
ACTCGTGGTCTTAAAATTGC+AGG 0.389689 4.3:+45223700 MS.gene03759:CDS
AAAGTGAAGGTTGGGAATCT+TGG 0.417455 4.3:-45223438 None:intergenic
ACAGATCCAAGTCAAGTTCC+TGG 0.422138 4.3:-45223628 None:intergenic
CTAAGTCTTCATAGTGAGAA+AGG 0.431631 4.3:+45223551 MS.gene03759:CDS
ATCTGGTTGTCCACATTTGG+AGG 0.433975 4.3:+45223853 MS.gene03759:CDS
GGTAATTGAAAGTGAAGGTT+GGG 0.443422 4.3:-45223446 None:intergenic
CAAGGTCCAGGAACTTGACT+TGG 0.457085 4.3:+45223622 MS.gene03759:CDS
TGATTTCTTTGGACAACAAA+GGG 0.475263 4.3:-45223481 None:intergenic
ACAGATTAAGGCCCCATCAC+TGG 0.478967 4.3:+45223988 MS.gene03759:CDS
TGAATGAAGGTTAAGTTGCT+AGG 0.490883 4.3:-45224562 None:intergenic
GGCATTAGATCTCAAGGTCC+AGG 0.506392 4.3:+45223610 MS.gene03759:CDS
TAAGTGAAGAGAAATGTTGA+TGG 0.512029 4.3:-45223906 None:intergenic
TAGAAAGAACTTCCAGTGAT+GGG 0.514358 4.3:-45224000 None:intergenic
AACAAAGGGTCTGAAATCTC+TGG 0.515254 4.3:-45223467 None:intergenic
TTGATTTCTTTGGACAACAA+AGG 0.522569 4.3:-45223482 None:intergenic
GTATACACACTGTTCAAATC+CGG 0.532076 4.3:-45224049 None:intergenic
CATGTGTTCTATCCACAAGA+TGG 0.542093 4.3:+45223402 MS.gene03759:CDS
TTCAGAGGCATTAGATCTCA+AGG 0.542872 4.3:+45223604 MS.gene03759:CDS
AATGTTAAATCATTGGCTCT+CGG 0.545124 4.3:+45224091 MS.gene03759:CDS
TGGTAATTGAAAGTGAAGGT+TGG 0.551378 4.3:-45223447 None:intergenic
ATAGAAAGAACTTCCAGTGA+TGG 0.555701 4.3:-45224001 None:intergenic
TAGAACATCTCACAGTTTCA+CGG 0.569419 4.3:-45223790 None:intergenic
ATGTGTTCTATCCACAAGAT+GGG 0.579779 4.3:+45223403 MS.gene03759:CDS
AAAAGAAGTTCCTCCAAATG+TGG 0.584570 4.3:-45223863 None:intergenic
TCGAAAGACGAACTGAGTGC+TGG 0.586394 4.3:-45223734 None:intergenic
AAGTGAAGAGAAATGTTGAT+GGG 0.590364 4.3:-45223905 None:intergenic
TGTACACGCGTGGGTTTCAG+AGG 0.593991 4.3:+45223589 MS.gene03759:CDS
GATGGGGCCTTAATCTGTAG+TGG 0.594949 4.3:-45223983 None:intergenic
AACCACATGATGTACACGCG+TGG 0.598110 4.3:+45223579 MS.gene03759:CDS
CTCGTGGTCTTAAAATTGCA+GGG 0.606982 4.3:+45223701 MS.gene03759:CDS
GCAGATTGACTCCCATCTTG+TGG 0.609178 4.3:-45223414 None:intergenic
TTCCACGTGTGAGTCACTCG+TGG 0.631019 4.3:+45223685 MS.gene03759:CDS
ACGCGTGTACATCATGTGGT+TGG 0.647837 4.3:-45223577 None:intergenic
AGAAAGAACTTCCAGTGATG+GGG 0.648540 4.3:-45223999 None:intergenic
AGATGAAGAATCTTTAGTGA+CGG 0.657169 4.3:-45223767 None:intergenic
AGATGTTCTATGTTTGATGA+CGG 0.657979 4.3:+45223803 MS.gene03759:CDS
ACCACATGATGTACACGCGT+GGG 0.669636 4.3:+45223580 MS.gene03759:CDS
GACCACGAGTGACTCACACG+TGG 0.682798 4.3:-45223687 None:intergenic
AGTGTGTATACACTCATGAG+AGG 0.688233 4.3:+45224061 MS.gene03759:CDS
TCTCTGGTAATTGAAAGTGA+AGG 0.696256 4.3:-45223451 None:intergenic
TCACACGTGGAAAGCCTAAG+CGG 0.701582 4.3:-45223674 None:intergenic
ACCCACGCGTGTACATCATG+TGG 0.716780 4.3:-45223581 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTCTTTTTTAATTACA+AGG + chr4.3:45224149-45224168 MS.gene03759:intron 10.0%
!!! ACTTAGTTTTCTTATATTTT+CGG - chr4.3:45223537-45223556 None:intergenic 15.0%
!!! TCACAATTTATTATTTTTGT+GGG + chr4.3:45224276-45224295 MS.gene03759:intron 15.0%
!!! TTCACAATTTATTATTTTTG+TGG + chr4.3:45224275-45224294 MS.gene03759:intron 15.0%
!!! TTTGCACAATTTTTATTTTA+AGG + chr4.3:45224409-45224428 MS.gene03759:intron 15.0%
!!! TTTTTCAAATGTTAAATCAT+TGG + chr4.3:45224084-45224103 MS.gene03759:CDS 15.0%
!!! ATTCACAAATTTGATTTCTT+TGG - chr4.3:45223495-45223514 None:intergenic 20.0%
!!! GTTCTTTCTATTTTCTATTT+TGG + chr4.3:45224013-45224032 MS.gene03759:CDS 20.0%
! AATATAATAAGCTCAATACC+TGG + chr4.3:45224436-45224455 MS.gene03759:intron 25.0%
! AATGAGAATAGAATTGCATA+TGG - chr4.3:45224190-45224209 None:intergenic 25.0%
! ATGAGAATAGAATTGCATAT+GGG - chr4.3:45224189-45224208 None:intergenic 25.0%
! TTAAAAACAGAAGTAGTCAT+AGG - chr4.3:45223956-45223975 None:intergenic 25.0%
!! ATTACAAGATCCTTAAGTTT+TGG - chr4.3:45224358-45224377 None:intergenic 25.0%
!! GATCTCAATAATTTTCTATC+TGG + chr4.3:45223836-45223855 MS.gene03759:CDS 25.0%
!! TATAACACTCTTTTGTTGAT+AGG - chr4.3:45223379-45223398 None:intergenic 25.0%
AAATATCTGAGAATTGCAGT+TGG + chr4.3:45224302-45224321 MS.gene03759:intron 30.0%
AAGTGAAGAGAAATGTTGAT+GGG - chr4.3:45223908-45223927 None:intergenic 30.0%
ACTTAAGGATCTTGTAATTG+CGG + chr4.3:45224360-45224379 MS.gene03759:intron 30.0%
AGATGAAGAATCTTTAGTGA+CGG - chr4.3:45223770-45223789 None:intergenic 30.0%
AGATGTTCTATGTTTGATGA+CGG + chr4.3:45223803-45223822 MS.gene03759:CDS 30.0%
TAAGTGAAGAGAAATGTTGA+TGG - chr4.3:45223909-45223928 None:intergenic 30.0%
TGATTTCTTTGGACAACAAA+GGG - chr4.3:45223484-45223503 None:intergenic 30.0%
TTGATTTCTTTGGACAACAA+AGG - chr4.3:45223485-45223504 None:intergenic 30.0%
! AAAAAATCTTATTGCCGCTT+AGG + chr4.3:45223660-45223679 MS.gene03759:CDS 30.0%
! AACTATACGTATCTTTTGCT+AGG - chr4.3:45224479-45224498 None:intergenic 30.0%
!! AATGTTAAATCATTGGCTCT+CGG + chr4.3:45224091-45224110 MS.gene03759:CDS 30.0%
AAAAGAAGTTCCTCCAAATG+TGG - chr4.3:45223866-45223885 None:intergenic 35.0%
ATAGAAAGAACTTCCAGTGA+TGG - chr4.3:45224004-45224023 None:intergenic 35.0%
ATGTGTTCTATCCACAAGAT+GGG + chr4.3:45223403-45223422 MS.gene03759:CDS 35.0%
CTAAGTCTTCATAGTGAGAA+AGG + chr4.3:45223551-45223570 MS.gene03759:CDS 35.0%
GGTAATTGAAAGTGAAGGTT+GGG - chr4.3:45223449-45223468 None:intergenic 35.0%
GTATACACACTGTTCAAATC+CGG - chr4.3:45224052-45224071 None:intergenic 35.0%
TAGAAAGAACTTCCAGTGAT+GGG - chr4.3:45224003-45224022 None:intergenic 35.0%
TAGAACATCTCACAGTTTCA+CGG - chr4.3:45223793-45223812 None:intergenic 35.0%
TCTCTGGTAATTGAAAGTGA+AGG - chr4.3:45223454-45223473 None:intergenic 35.0%
TGCATATGGGTGACTAAATA+TGG - chr4.3:45224176-45224195 None:intergenic 35.0%
TGGTAATTGAAAGTGAAGGT+TGG - chr4.3:45223450-45223469 None:intergenic 35.0%
! ACAGAGTGTTCCAAAACTTA+AGG + chr4.3:45224345-45224364 MS.gene03759:intron 35.0%
! GTTTTGTCCACTACAGATTA+AGG + chr4.3:45223976-45223995 MS.gene03759:CDS 35.0%
!! TTATATTTTCGGTGCGTCTT+AGG - chr4.3:45223526-45223545 None:intergenic 35.0%
!!! GCGGCAATAAGATTTTTTCA+TGG - chr4.3:45223658-45223677 None:intergenic 35.0%
!!! TTTTGGCTTTTGTGAGTATC+CGG + chr4.3:45224030-45224049 MS.gene03759:CDS 35.0%
AAAGTGAAGGTTGGGAATCT+TGG - chr4.3:45223441-45223460 None:intergenic 40.0%
AGAAAGAACTTCCAGTGATG+GGG - chr4.3:45224002-45224021 None:intergenic 40.0%
AGTGTGTATACACTCATGAG+AGG + chr4.3:45224061-45224080 MS.gene03759:CDS 40.0%
CATGTGTTCTATCCACAAGA+TGG + chr4.3:45223402-45223421 MS.gene03759:CDS 40.0%
TCTATCTGGTTGTCCACATT+TGG + chr4.3:45223850-45223869 MS.gene03759:CDS 40.0%
TGTTATGCAGTTTCTCAGCA+TGG + chr4.3:45224219-45224238 MS.gene03759:intron 40.0%
! AACAAAGGGTCTGAAATCTC+TGG - chr4.3:45223470-45223489 None:intergenic 40.0%
! ACTCGTGGTCTTAAAATTGC+AGG + chr4.3:45223700-45223719 MS.gene03759:CDS 40.0%
! CTCGTGGTCTTAAAATTGCA+GGG + chr4.3:45223701-45223720 MS.gene03759:CDS 40.0%
!! TTCAGAGGCATTAGATCTCA+AGG + chr4.3:45223604-45223623 MS.gene03759:CDS 40.0%
ACAGATCCAAGTCAAGTTCC+TGG - chr4.3:45223631-45223650 None:intergenic 45.0%
ATCTGGTTGTCCACATTTGG+AGG + chr4.3:45223853-45223872 MS.gene03759:CDS 45.0%
TATGCAGTTTCTCAGCATGG+AGG + chr4.3:45224222-45224241 MS.gene03759:intron 45.0%
AACCACATGATGTACACGCG+TGG + chr4.3:45223579-45223598 MS.gene03759:CDS 50.0%
ACAGATTAAGGCCCCATCAC+TGG + chr4.3:45223988-45224007 MS.gene03759:CDS 50.0%
ACCACATGATGTACACGCGT+GGG + chr4.3:45223580-45223599 MS.gene03759:CDS 50.0%
ACGCGTGTACATCATGTGGT+TGG - chr4.3:45223580-45223599 None:intergenic 50.0%
CAAGGTCCAGGAACTTGACT+TGG + chr4.3:45223622-45223641 MS.gene03759:CDS 50.0%
GATGGGGCCTTAATCTGTAG+TGG - chr4.3:45223986-45224005 None:intergenic 50.0%
GGCATTAGATCTCAAGGTCC+AGG + chr4.3:45223610-45223629 MS.gene03759:CDS 50.0%
TCACACGTGGAAAGCCTAAG+CGG - chr4.3:45223677-45223696 None:intergenic 50.0%
TCGAAAGACGAACTGAGTGC+TGG - chr4.3:45223737-45223756 None:intergenic 50.0%
! GCAGATTGACTCCCATCTTG+TGG - chr4.3:45223417-45223436 None:intergenic 50.0%
! GTCTTTTCTCTTCTCGTGCC+AGG - chr4.3:45224457-45224476 None:intergenic 50.0%
ACCCACGCGTGTACATCATG+TGG - chr4.3:45223584-45223603 None:intergenic 55.0%
TGTACACGCGTGGGTTTCAG+AGG + chr4.3:45223589-45223608 MS.gene03759:CDS 55.0%
TTCCACGTGTGAGTCACTCG+TGG + chr4.3:45223685-45223704 MS.gene03759:CDS 55.0%
GACCACGAGTGACTCACACG+TGG - chr4.3:45223690-45223709 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 45223302 45224574 45223302 ID=MS.gene03759
chr4.3 mRNA 45223302 45224574 45223302 ID=MS.gene03759.t1;Parent=MS.gene03759
chr4.3 exon 45223302 45224129 45223302 ID=MS.gene03759.t1.exon1;Parent=MS.gene03759.t1
chr4.3 CDS 45223302 45224129 45223302 ID=cds.MS.gene03759.t1;Parent=MS.gene03759.t1
chr4.3 exon 45224557 45224574 45224557 ID=MS.gene03759.t1.exon2;Parent=MS.gene03759.t1
chr4.3 CDS 45224557 45224574 45224557 ID=cds.MS.gene03759.t1;Parent=MS.gene03759.t1
Gene Sequence

>MS.gene03759

ATGGCGTGCTCTGATGAAGAACATGATCGATTAAGCAATCTCTCAGATGATTTGATTTGTCATATTTTGTCTTTCCTATCAACAAAAGAGTGTTATAGAACATGTGTTCTATCCACAAGATGGGAGTCAATCTGCACCAAGATTCCCAACCTTCACTTTCAATTACCAGAGATTTCAGACCCTTTGTTGTCCAAAGAAATCAAATTTGTGAATGTTGCTCTCCTAAGACGCACCGAAAATATAAGAAAACTAAGTCTTCATAGTGAGAAAGGCTGCCAACCACATGATGTACACGCGTGGGTTTCAGAGGCATTAGATCTCAAGGTCCAGGAACTTGACTTGGATCTGTTTCGCCATGAAAAAATCTTATTGCCGCTTAGGCTTTCCACGTGTGAGTCACTCGTGGTCTTAAAATTGCAGGGCAGAATTCAACCAGCACTCAGTTCGTCTTTCGATGTATATTTACCGTCACTAAAGATTCTTCATCTCCGTGAAACTGTGAGATGTTCTATGTTTGATGACGGTAAAGAGTATGATCTCAATAATTTTCTATCTGGTTGTCCACATTTGGAGGAACTTCTTTTAGATGAGATCTTTTCGATACCCATCAACATTTCTCTTCACTTATTGAAGAGATTATTCGTTTATTTACCTATGACTACTTCTGTTTTTAAGTTTTGTCCACTACAGATTAAGGCCCCATCACTGGAAGTTCTTTCTATTTTCTATTTTGGCTTTTGTGAGTATCCGGATTTGAACAGTGTGTATACACTCATGAGAGGTTTTTCAAATGTTAAATCATTGGCTCTCGGATCTAAAACTTTACATGTAAGCTTAATAAATAAATATTTTTCTTTTTTAATTACAAGGTCCATATTTAGTCACCCATATGCAATTCTATTCTCATTTTATAATTTTGTTATGCAGTTTCTCAGCATGGAGGACAAACTTGACAACTTACATCTTCTCACTTTTCACAATTTATTATTTTTGTGGGTTGAAATATCTGAGAATTGCAGTTGGAATATGCTCGTCAGCTTTCTACAGAGTGTTCCAAAACTTAAGGATCTTGTAATTGCGGTGTGTACGACGTTTTTTTAAACTATATTTGCACAATTTTTATTTTAAGGATAAAATATAATAAGCTCAATACCTGGCACGAGAAGAGAAAAGACCTAGCAAAAGATACGTATAGTTTGCAAATAAAACAGATCAATAAATTAATTAATTCAAAACAATCTCTATATTTGTGTAGATTGTCCTAGCAACTTAA

Protein sequence

>MS.gene03759.t1

MACSDEEHDRLSNLSDDLICHILSFLSTKECYRTCVLSTRWESICTKIPNLHFQLPEISDPLLSKEIKFVNVALLRRTENIRKLSLHSEKGCQPHDVHAWVSEALDLKVQELDLDLFRHEKILLPLRLSTCESLVVLKLQGRIQPALSSSFDVYLPSLKILHLRETVRCSMFDDGKEYDLNNFLSGCPHLEELLLDEIFSIPINISLHLLKRLFVYLPMTTSVFKFCPLQIKAPSLEVLSIFYFGFCEYPDLNSVYTLMRGFSNVKSLALGSKTLHIVLAT