Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91201.t1 | KEH29904.1 | 95.2 | 479 | 22 | 1 | 37 | 514 | 1 | 479 | 9.60E-237 | 829.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91201.t1 | Q84X02 | 27.8 | 454 | 267 | 12 | 45 | 492 | 2 | 400 | 2.1e-22 | 108.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91201.t1 | A0A072UJK1 | 95.2 | 479 | 22 | 1 | 37 | 514 | 1 | 479 | 6.9e-237 | 829.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91201.t1 | MTR_4g055990 | 95.407 | 479 | 21 | 1 | 37 | 514 | 1 | 479 | 0.0 | 914 |
MS.gene91201.t1 | MTR_4g055990 | 95.407 | 479 | 21 | 1 | 37 | 514 | 1 | 479 | 0.0 | 913 |
MS.gene91201.t1 | MTR_4g055580 | 84.134 | 479 | 71 | 1 | 36 | 514 | 91 | 564 | 0.0 | 791 |
MS.gene91201.t1 | MTR_4g056040 | 79.749 | 479 | 84 | 5 | 37 | 514 | 1 | 467 | 0.0 | 751 |
MS.gene91201.t1 | MTR_4g056020 | 80.585 | 479 | 50 | 4 | 37 | 514 | 1 | 437 | 0.0 | 749 |
MS.gene91201.t1 | MTR_4g056070 | 81.900 | 442 | 71 | 3 | 37 | 474 | 1 | 437 | 0.0 | 718 |
MS.gene91201.t1 | MTR_4g056030 | 75.992 | 479 | 72 | 4 | 37 | 514 | 1 | 437 | 0.0 | 706 |
MS.gene91201.t1 | MTR_1g038710 | 62.372 | 489 | 133 | 6 | 33 | 514 | 7 | 451 | 0.0 | 546 |
MS.gene91201.t1 | MTR_1g090883 | 57.761 | 393 | 124 | 6 | 38 | 427 | 12 | 365 | 7.17e-138 | 403 |
MS.gene91201.t1 | MTR_7g110920 | 56.145 | 358 | 104 | 5 | 172 | 514 | 1 | 320 | 1.10e-120 | 357 |
MS.gene91201.t1 | MTR_4g056020 | 82.877 | 146 | 20 | 1 | 369 | 514 | 1 | 141 | 5.96e-78 | 241 |
MS.gene91201.t1 | MTR_4g093690 | 48.553 | 311 | 113 | 7 | 35 | 340 | 8 | 276 | 1.53e-74 | 237 |
MS.gene91201.t1 | MTR_4g056010 | 91.000 | 100 | 9 | 0 | 141 | 240 | 1 | 100 | 1.60e-57 | 186 |
MS.gene91201.t1 | MTR_1g090900 | 53.271 | 214 | 60 | 4 | 37 | 247 | 1 | 177 | 3.44e-55 | 184 |
MS.gene91201.t1 | MTR_1g090890 | 63.333 | 90 | 27 | 2 | 428 | 514 | 30 | 116 | 3.11e-29 | 111 |
MS.gene91201.t1 | MTR_5g084070 | 29.870 | 462 | 244 | 16 | 41 | 493 | 9 | 399 | 1.45e-26 | 112 |
MS.gene91201.t1 | MTR_7g115270 | 25.840 | 476 | 239 | 14 | 45 | 506 | 12 | 387 | 2.63e-24 | 105 |
MS.gene91201.t1 | MTR_7g056433 | 27.412 | 456 | 218 | 17 | 40 | 488 | 7 | 356 | 3.60e-24 | 104 |
MS.gene91201.t1 | MTR_8g062270 | 26.293 | 464 | 267 | 16 | 45 | 488 | 16 | 424 | 4.49e-24 | 105 |
MS.gene91201.t1 | MTR_5g080710 | 28.687 | 495 | 256 | 19 | 23 | 493 | 4 | 425 | 5.43e-24 | 105 |
MS.gene91201.t1 | MTR_8g014260 | 26.223 | 511 | 258 | 15 | 42 | 511 | 13 | 445 | 5.10e-23 | 102 |
MS.gene91201.t1 | MTR_8g467800 | 28.970 | 466 | 253 | 18 | 31 | 477 | 6 | 412 | 1.38e-22 | 100 |
MS.gene91201.t1 | MTR_2g007400 | 26.087 | 483 | 242 | 22 | 45 | 510 | 12 | 396 | 4.42e-22 | 99.0 |
MS.gene91201.t1 | MTR_8g445780 | 27.130 | 446 | 239 | 14 | 45 | 473 | 13 | 389 | 9.57e-21 | 94.7 |
MS.gene91201.t1 | MTR_8g058970 | 26.176 | 489 | 286 | 18 | 40 | 500 | 14 | 455 | 1.35e-20 | 95.1 |
MS.gene91201.t1 | MTR_3g108560 | 27.692 | 455 | 206 | 20 | 42 | 488 | 17 | 356 | 1.59e-19 | 90.9 |
MS.gene91201.t1 | MTR_8g468840 | 26.134 | 463 | 267 | 18 | 45 | 488 | 14 | 420 | 8.43e-19 | 89.4 |
MS.gene91201.t1 | MTR_8g468810 | 26.824 | 466 | 267 | 18 | 40 | 488 | 20 | 428 | 7.27e-18 | 86.7 |
MS.gene91201.t1 | MTR_8g014160 | 29.683 | 347 | 178 | 12 | 40 | 366 | 36 | 336 | 1.45e-17 | 85.5 |
MS.gene91201.t1 | MTR_8g467800 | 30.117 | 342 | 173 | 12 | 41 | 366 | 16 | 307 | 3.60e-16 | 80.5 |
MS.gene91201.t1 | MTR_5g058100 | 25.265 | 471 | 236 | 18 | 37 | 500 | 1 | 362 | 3.84e-16 | 80.5 |
MS.gene91201.t1 | MTR_4g080773 | 26.230 | 488 | 277 | 19 | 30 | 488 | 1 | 434 | 5.43e-16 | 80.9 |
MS.gene91201.t1 | MTR_4g080773 | 26.380 | 489 | 275 | 20 | 30 | 488 | 1 | 434 | 7.47e-16 | 80.5 |
MS.gene91201.t1 | MTR_6g011460 | 27.252 | 433 | 250 | 17 | 45 | 464 | 46 | 426 | 1.34e-15 | 79.3 |
MS.gene91201.t1 | MTR_8g058965 | 26.403 | 481 | 249 | 19 | 45 | 489 | 13 | 424 | 1.49e-15 | 79.3 |
MS.gene91201.t1 | MTR_8g468810 | 28.274 | 336 | 182 | 14 | 40 | 362 | 20 | 309 | 7.48e-14 | 73.2 |
MS.gene91201.t1 | MTR_8g468810 | 28.274 | 336 | 182 | 14 | 40 | 362 | 20 | 309 | 7.76e-14 | 73.2 |
MS.gene91201.t1 | MTR_8g468810 | 28.274 | 336 | 182 | 14 | 40 | 362 | 20 | 309 | 8.18e-14 | 73.2 |
MS.gene91201.t1 | MTR_3g109982 | 25.407 | 492 | 261 | 17 | 43 | 488 | 11 | 442 | 9.44e-14 | 74.3 |
MS.gene91201.t1 | MTR_8g062310 | 30.081 | 246 | 118 | 10 | 45 | 286 | 25 | 220 | 1.00e-13 | 73.6 |
MS.gene91201.t1 | MTR_8g468810 | 28.274 | 336 | 182 | 14 | 40 | 362 | 20 | 309 | 1.54e-13 | 72.8 |
MS.gene91201.t1 | MTR_1g085120 | 26.281 | 449 | 224 | 23 | 45 | 488 | 92 | 438 | 1.63e-13 | 73.2 |
MS.gene91201.t1 | MTR_1g085120 | 26.281 | 449 | 224 | 23 | 45 | 488 | 167 | 513 | 2.58e-13 | 72.8 |
MS.gene91201.t1 | MTR_4g039440 | 24.319 | 477 | 238 | 19 | 45 | 511 | 34 | 397 | 5.23e-13 | 71.2 |
MS.gene91201.t1 | MTR_6g022390 | 32.911 | 158 | 81 | 6 | 45 | 202 | 5 | 137 | 1.31e-12 | 65.9 |
MS.gene91201.t1 | MTR_4g080787 | 24.853 | 511 | 280 | 23 | 30 | 504 | 1 | 443 | 1.46e-12 | 70.1 |
MS.gene91201.t1 | MTR_1g085120 | 32.287 | 223 | 109 | 12 | 45 | 266 | 179 | 360 | 1.71e-12 | 70.1 |
MS.gene91201.t1 | MTR_3g048290 | 24.740 | 481 | 262 | 18 | 41 | 488 | 19 | 432 | 2.15e-12 | 69.7 |
MS.gene91201.t1 | MTR_5g008950 | 32.432 | 111 | 65 | 2 | 383 | 490 | 233 | 336 | 7.89e-12 | 67.4 |
MS.gene91201.t1 | MTR_3g023630 | 22.545 | 448 | 233 | 14 | 45 | 488 | 8 | 345 | 1.11e-11 | 67.0 |
MS.gene91201.t1 | MTR_5g045170 | 30.222 | 225 | 107 | 10 | 47 | 266 | 16 | 195 | 2.33e-11 | 65.9 |
MS.gene91201.t1 | MTR_3g108560 | 32.159 | 227 | 101 | 11 | 42 | 266 | 17 | 192 | 7.14e-11 | 63.9 |
MS.gene91201.t1 | MTR_7g110910 | 57.407 | 54 | 23 | 0 | 21 | 74 | 142 | 195 | 8.12e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91201.t1 | AT5G38396 | 28.392 | 479 | 252 | 18 | 45 | 489 | 2 | 423 | 2.32e-26 | 112 |
MS.gene91201.t1 | AT4G00315 | 27.975 | 479 | 262 | 21 | 45 | 499 | 2 | 421 | 3.53e-26 | 111 |
MS.gene91201.t1 | AT5G62970 | 31.957 | 460 | 257 | 25 | 45 | 492 | 2 | 417 | 4.34e-26 | 111 |
MS.gene91201.t1 | AT2G26860 | 28.758 | 459 | 256 | 16 | 45 | 492 | 2 | 400 | 6.04e-26 | 110 |
MS.gene91201.t1 | AT2G26860 | 28.758 | 459 | 256 | 16 | 45 | 492 | 2 | 400 | 6.04e-26 | 110 |
MS.gene91201.t1 | AT4G14103 | 28.706 | 425 | 214 | 17 | 45 | 436 | 8 | 376 | 2.89e-25 | 108 |
MS.gene91201.t1 | AT3G59160 | 27.603 | 413 | 224 | 14 | 45 | 417 | 13 | 390 | 1.15e-24 | 107 |
MS.gene91201.t1 | AT4G14103 | 28.500 | 400 | 203 | 15 | 45 | 416 | 8 | 352 | 3.65e-24 | 104 |
MS.gene91201.t1 | AT4G14103 | 28.500 | 400 | 203 | 15 | 45 | 416 | 8 | 352 | 3.65e-24 | 104 |
MS.gene91201.t1 | AT3G50710 | 27.350 | 468 | 249 | 16 | 45 | 493 | 2 | 397 | 5.48e-24 | 104 |
MS.gene91201.t1 | AT4G10400 | 26.608 | 451 | 250 | 15 | 45 | 488 | 2 | 378 | 7.12e-24 | 104 |
MS.gene91201.t1 | AT4G10400 | 26.608 | 451 | 250 | 15 | 45 | 488 | 2 | 378 | 7.12e-24 | 104 |
MS.gene91201.t1 | AT4G10400 | 26.608 | 451 | 250 | 15 | 45 | 488 | 2 | 378 | 7.12e-24 | 104 |
MS.gene91201.t1 | AT4G00320 | 27.970 | 404 | 227 | 12 | 39 | 417 | 7 | 371 | 7.70e-24 | 105 |
MS.gene91201.t1 | AT4G26340 | 28.261 | 460 | 238 | 21 | 45 | 487 | 2 | 386 | 1.25e-23 | 103 |
MS.gene91201.t1 | AT3G59190 | 27.901 | 405 | 218 | 11 | 45 | 420 | 12 | 371 | 1.78e-23 | 102 |
MS.gene91201.t1 | AT5G56380 | 28.384 | 458 | 236 | 16 | 45 | 476 | 2 | 393 | 1.84e-23 | 103 |
MS.gene91201.t1 | AT5G56380 | 28.384 | 458 | 236 | 16 | 45 | 476 | 2 | 393 | 1.84e-23 | 103 |
MS.gene91201.t1 | AT3G59190 | 28.049 | 410 | 220 | 12 | 45 | 425 | 12 | 375 | 4.16e-23 | 103 |
MS.gene91201.t1 | AT1G55660 | 26.981 | 467 | 260 | 21 | 45 | 489 | 53 | 460 | 9.86e-23 | 101 |
MS.gene91201.t1 | AT5G41830 | 28.605 | 430 | 228 | 14 | 39 | 438 | 7 | 387 | 2.15e-22 | 100 |
MS.gene91201.t1 | AT4G14096 | 26.841 | 421 | 223 | 15 | 44 | 436 | 7 | 370 | 2.61e-22 | 100 |
MS.gene91201.t1 | AT4G14096 | 26.841 | 421 | 223 | 15 | 44 | 436 | 7 | 370 | 2.61e-22 | 100 |
MS.gene91201.t1 | AT3G59230 | 26.559 | 497 | 282 | 13 | 45 | 508 | 12 | 458 | 4.59e-22 | 99.8 |
MS.gene91201.t1 | AT5G41840 | 28.186 | 408 | 220 | 11 | 45 | 417 | 14 | 383 | 4.99e-22 | 99.8 |
MS.gene91201.t1 | AT1G51370 | 27.176 | 471 | 253 | 19 | 43 | 497 | 17 | 413 | 5.80e-22 | 99.0 |
MS.gene91201.t1 | AT1G58310 | 28.822 | 399 | 227 | 13 | 45 | 417 | 8 | 375 | 9.54e-22 | 99.0 |
MS.gene91201.t1 | AT5G38590 | 25.821 | 457 | 255 | 14 | 45 | 490 | 2 | 385 | 2.53e-21 | 96.7 |
MS.gene91201.t1 | AT4G13965 | 28.112 | 466 | 247 | 24 | 45 | 496 | 10 | 401 | 3.26e-21 | 96.7 |
MS.gene91201.t1 | AT5G60610 | 27.948 | 458 | 243 | 19 | 45 | 488 | 2 | 386 | 4.33e-21 | 95.5 |
MS.gene91201.t1 | AT5G60610 | 27.948 | 458 | 243 | 19 | 45 | 488 | 2 | 386 | 4.33e-21 | 95.5 |
MS.gene91201.t1 | AT3G03030 | 27.536 | 414 | 226 | 12 | 45 | 425 | 2 | 374 | 6.83e-21 | 95.9 |
MS.gene91201.t1 | AT4G13960 | 26.582 | 474 | 260 | 14 | 45 | 489 | 2 | 416 | 9.17e-21 | 95.5 |
MS.gene91201.t1 | AT4G13960 | 26.582 | 474 | 260 | 14 | 45 | 489 | 2 | 416 | 9.17e-21 | 95.5 |
MS.gene91201.t1 | AT3G59170 | 27.451 | 408 | 234 | 14 | 45 | 417 | 7 | 387 | 1.11e-20 | 95.5 |
MS.gene91201.t1 | AT4G26350 | 24.353 | 464 | 263 | 15 | 45 | 489 | 2 | 396 | 2.17e-20 | 94.0 |
MS.gene91201.t1 | AT3G59200 | 26.699 | 412 | 215 | 13 | 44 | 420 | 6 | 365 | 1.19e-19 | 90.9 |
MS.gene91201.t1 | AT2G26030 | 26.609 | 466 | 260 | 19 | 45 | 486 | 4 | 411 | 3.03e-19 | 90.9 |
MS.gene91201.t1 | AT4G22280 | 29.231 | 390 | 203 | 15 | 45 | 420 | 2 | 332 | 3.91e-19 | 89.0 |
MS.gene91201.t1 | AT3G59210 | 27.861 | 402 | 218 | 13 | 41 | 417 | 3 | 357 | 4.89e-19 | 90.5 |
MS.gene91201.t1 | AT3G59210 | 27.861 | 402 | 218 | 13 | 41 | 417 | 3 | 357 | 4.89e-19 | 90.5 |
MS.gene91201.t1 | AT3G59210 | 27.861 | 402 | 218 | 13 | 41 | 417 | 3 | 357 | 4.89e-19 | 90.5 |
MS.gene91201.t1 | AT3G59210 | 27.861 | 402 | 218 | 13 | 41 | 417 | 3 | 357 | 4.89e-19 | 90.5 |
MS.gene91201.t1 | AT3G59210 | 27.861 | 402 | 218 | 13 | 41 | 417 | 3 | 357 | 4.89e-19 | 90.5 |
MS.gene91201.t1 | AT4G22280 | 28.643 | 398 | 211 | 14 | 45 | 428 | 2 | 340 | 5.08e-19 | 89.7 |
MS.gene91201.t1 | AT1G52650 | 26.875 | 480 | 250 | 17 | 45 | 488 | 2 | 416 | 5.78e-19 | 90.1 |
MS.gene91201.t1 | AT3G58880 | 25.959 | 443 | 252 | 14 | 45 | 462 | 3 | 394 | 6.58e-19 | 89.7 |
MS.gene91201.t1 | AT3G59200 | 25.893 | 448 | 238 | 14 | 44 | 456 | 6 | 394 | 1.13e-18 | 89.4 |
MS.gene91201.t1 | AT3G58920 | 27.833 | 406 | 219 | 14 | 45 | 418 | 2 | 365 | 1.82e-18 | 88.6 |
MS.gene91201.t1 | AT3G62430 | 28.392 | 398 | 203 | 16 | 45 | 418 | 2 | 341 | 2.73e-18 | 87.8 |
MS.gene91201.t1 | AT1G32375 | 27.101 | 476 | 249 | 19 | 45 | 500 | 2 | 399 | 2.89e-18 | 87.4 |
MS.gene91201.t1 | AT1G32375 | 27.101 | 476 | 249 | 19 | 45 | 500 | 2 | 399 | 2.89e-18 | 87.4 |
MS.gene91201.t1 | AT3G58960 | 26.914 | 405 | 212 | 13 | 45 | 419 | 2 | 352 | 3.59e-18 | 87.8 |
MS.gene91201.t1 | AT5G56370 | 26.947 | 475 | 268 | 18 | 45 | 512 | 2 | 404 | 4.64e-18 | 87.0 |
MS.gene91201.t1 | AT5G56370 | 26.947 | 475 | 268 | 18 | 45 | 512 | 2 | 404 | 4.64e-18 | 87.0 |
MS.gene91201.t1 | AT3G03040 | 27.407 | 405 | 210 | 12 | 45 | 416 | 2 | 355 | 5.25e-18 | 87.0 |
MS.gene91201.t1 | AT3G52680 | 26.360 | 478 | 231 | 18 | 45 | 490 | 21 | 409 | 1.02e-17 | 86.3 |
MS.gene91201.t1 | AT4G10420 | 27.557 | 352 | 205 | 11 | 172 | 510 | 1 | 315 | 1.06e-17 | 84.7 |
MS.gene91201.t1 | AT2G26030 | 26.180 | 466 | 257 | 19 | 45 | 486 | 4 | 406 | 1.06e-17 | 85.9 |
MS.gene91201.t1 | AT2G26030 | 26.180 | 466 | 257 | 19 | 45 | 486 | 4 | 406 | 1.06e-17 | 85.9 |
MS.gene91201.t1 | AT3G03030 | 27.684 | 354 | 187 | 9 | 45 | 368 | 2 | 316 | 1.64e-17 | 84.3 |
MS.gene91201.t1 | AT3G58900 | 29.484 | 407 | 204 | 15 | 45 | 418 | 2 | 358 | 1.73e-17 | 85.5 |
MS.gene91201.t1 | AT3G58860 | 26.269 | 453 | 255 | 15 | 42 | 472 | 4 | 399 | 2.12e-17 | 85.1 |
MS.gene91201.t1 | AT1G06630 | 28.535 | 389 | 216 | 15 | 44 | 418 | 11 | 351 | 2.24e-17 | 84.7 |
MS.gene91201.t1 | AT1G06630 | 28.535 | 389 | 216 | 15 | 44 | 418 | 11 | 351 | 2.24e-17 | 84.7 |
MS.gene91201.t1 | AT1G06630 | 28.535 | 389 | 216 | 15 | 44 | 418 | 11 | 351 | 2.24e-17 | 84.7 |
MS.gene91201.t1 | AT1G06630 | 28.535 | 389 | 216 | 15 | 44 | 418 | 11 | 351 | 2.24e-17 | 84.7 |
MS.gene91201.t1 | AT3G59180 | 28.042 | 378 | 212 | 17 | 137 | 471 | 33 | 393 | 3.09e-17 | 84.7 |
MS.gene91201.t1 | AT1G06630 | 28.148 | 405 | 229 | 15 | 28 | 418 | 4 | 360 | 3.11e-17 | 84.3 |
MS.gene91201.t1 | AT5G56700 | 29.692 | 357 | 204 | 15 | 148 | 490 | 29 | 352 | 3.26e-17 | 83.6 |
MS.gene91201.t1 | AT1G55660 | 27.976 | 336 | 178 | 14 | 45 | 362 | 53 | 342 | 3.85e-17 | 83.6 |
MS.gene91201.t1 | AT1G51370 | 27.419 | 434 | 226 | 18 | 43 | 461 | 17 | 376 | 3.89e-17 | 84.0 |
MS.gene91201.t1 | AT1G06630 | 28.535 | 389 | 216 | 15 | 44 | 418 | 11 | 351 | 4.34e-17 | 84.3 |
MS.gene91201.t1 | AT5G56400 | 25.690 | 471 | 240 | 21 | 45 | 488 | 33 | 420 | 7.19e-17 | 83.6 |
MS.gene91201.t1 | AT1G78760 | 26.598 | 485 | 246 | 22 | 43 | 496 | 14 | 419 | 2.12e-16 | 82.0 |
MS.gene91201.t1 | AT1G55030 | 25.918 | 463 | 264 | 20 | 45 | 498 | 19 | 411 | 2.25e-16 | 81.6 |
MS.gene91201.t1 | AT5G56410 | 28.092 | 477 | 271 | 22 | 45 | 502 | 2 | 425 | 2.42e-16 | 82.0 |
MS.gene91201.t1 | AT1G55030 | 25.910 | 467 | 259 | 21 | 45 | 498 | 9 | 401 | 2.53e-16 | 81.6 |
MS.gene91201.t1 | AT3G26930 | 26.711 | 453 | 255 | 18 | 43 | 486 | 19 | 403 | 3.03e-16 | 81.6 |
MS.gene91201.t1 | AT5G38386 | 24.130 | 460 | 235 | 15 | 45 | 488 | 2 | 363 | 4.13e-16 | 80.9 |
MS.gene91201.t1 | AT5G38386 | 24.130 | 460 | 235 | 15 | 45 | 488 | 2 | 363 | 4.13e-16 | 80.9 |
MS.gene91201.t1 | AT1G51370 | 31.739 | 230 | 106 | 8 | 43 | 271 | 17 | 196 | 4.75e-16 | 80.1 |
MS.gene91201.t1 | AT3G42770 | 29.448 | 326 | 183 | 12 | 50 | 366 | 4 | 291 | 6.23e-16 | 80.9 |
MS.gene91201.t1 | AT5G22670 | 26.611 | 481 | 258 | 21 | 44 | 500 | 10 | 419 | 8.23e-16 | 80.1 |
MS.gene91201.t1 | AT5G53840 | 25.806 | 465 | 252 | 19 | 43 | 488 | 16 | 406 | 1.51e-15 | 79.3 |
MS.gene91201.t1 | AT4G15060 | 26.290 | 407 | 208 | 17 | 42 | 421 | 23 | 364 | 1.65e-15 | 79.0 |
MS.gene91201.t1 | AT2G29930 | 27.861 | 402 | 196 | 19 | 45 | 418 | 12 | 347 | 1.73e-15 | 79.3 |
MS.gene91201.t1 | AT2G29930 | 27.861 | 402 | 196 | 19 | 45 | 418 | 12 | 347 | 1.73e-15 | 79.3 |
MS.gene91201.t1 | AT2G42720 | 28.230 | 418 | 202 | 20 | 45 | 425 | 2 | 358 | 2.45e-15 | 78.6 |
MS.gene91201.t1 | AT3G59240 | 26.087 | 391 | 224 | 13 | 45 | 417 | 8 | 351 | 2.90e-15 | 79.0 |
MS.gene91201.t1 | AT3G26930 | 28.618 | 304 | 182 | 13 | 191 | 485 | 80 | 357 | 3.74e-15 | 77.8 |
MS.gene91201.t1 | AT5G22700 | 24.547 | 497 | 261 | 20 | 25 | 485 | 23 | 441 | 5.76e-15 | 77.8 |
MS.gene91201.t1 | AT1G66310 | 26.263 | 495 | 268 | 20 | 40 | 510 | 14 | 435 | 5.92e-15 | 77.4 |
MS.gene91201.t1 | AT1G78750 | 25.183 | 409 | 235 | 15 | 35 | 419 | 8 | 369 | 6.79e-15 | 77.4 |
MS.gene91201.t1 | AT1G78750 | 25.183 | 409 | 235 | 15 | 35 | 419 | 8 | 369 | 6.79e-15 | 77.4 |
MS.gene91201.t1 | AT2G42730 | 25.216 | 464 | 277 | 16 | 45 | 488 | 5 | 418 | 9.00e-15 | 77.0 |
MS.gene91201.t1 | AT3G56780 | 24.046 | 524 | 281 | 19 | 47 | 513 | 9 | 472 | 9.14e-15 | 77.0 |
MS.gene91201.t1 | AT3G49030 | 26.059 | 472 | 258 | 19 | 43 | 499 | 19 | 414 | 1.06e-14 | 76.6 |
MS.gene91201.t1 | AT4G15060 | 27.616 | 344 | 172 | 14 | 45 | 366 | 172 | 460 | 1.33e-14 | 76.6 |
MS.gene91201.t1 | AT1G05080 | 26.782 | 463 | 255 | 19 | 44 | 488 | 12 | 408 | 1.44e-14 | 76.3 |
MS.gene91201.t1 | AT3G58900 | 29.805 | 359 | 173 | 14 | 45 | 370 | 2 | 314 | 1.66e-14 | 75.1 |
MS.gene91201.t1 | AT3G58900 | 30.028 | 363 | 173 | 15 | 45 | 372 | 2 | 318 | 2.00e-14 | 74.7 |
MS.gene91201.t1 | AT3G58900 | 30.028 | 363 | 173 | 15 | 45 | 372 | 2 | 318 | 2.00e-14 | 74.7 |
MS.gene91201.t1 | AT1G66300 | 25.692 | 506 | 271 | 21 | 39 | 510 | 15 | 449 | 2.11e-14 | 75.9 |
MS.gene91201.t1 | AT5G56690 | 28.698 | 453 | 255 | 18 | 47 | 488 | 4 | 399 | 2.49e-14 | 75.5 |
MS.gene91201.t1 | AT1G69630 | 25.000 | 408 | 228 | 13 | 35 | 418 | 8 | 361 | 2.90e-14 | 75.5 |
MS.gene91201.t1 | AT5G22700 | 24.843 | 479 | 246 | 20 | 43 | 485 | 4 | 404 | 4.10e-14 | 74.7 |
MS.gene91201.t1 | AT5G22700 | 24.843 | 479 | 246 | 20 | 43 | 485 | 4 | 404 | 4.10e-14 | 74.7 |
MS.gene91201.t1 | AT5G22700 | 24.843 | 479 | 246 | 20 | 43 | 485 | 4 | 404 | 4.10e-14 | 74.7 |
MS.gene91201.t1 | AT5G22700 | 24.843 | 479 | 246 | 20 | 43 | 485 | 4 | 404 | 4.10e-14 | 74.7 |
MS.gene91201.t1 | AT5G25860 | 26.485 | 404 | 230 | 18 | 45 | 425 | 12 | 371 | 4.44e-14 | 74.7 |
MS.gene91201.t1 | AT1G13780 | 24.025 | 487 | 249 | 21 | 45 | 486 | 10 | 420 | 9.14e-14 | 73.9 |
MS.gene91201.t1 | AT5G56820 | 23.605 | 466 | 258 | 17 | 45 | 496 | 15 | 396 | 1.37e-13 | 73.2 |
MS.gene91201.t1 | AT3G26920 | 24.242 | 363 | 233 | 12 | 164 | 512 | 4 | 338 | 2.18e-13 | 72.0 |
MS.gene91201.t1 | AT3G26920 | 24.242 | 363 | 233 | 12 | 164 | 512 | 4 | 338 | 2.18e-13 | 72.0 |
MS.gene91201.t1 | AT5G44950 | 24.793 | 484 | 270 | 18 | 45 | 502 | 4 | 419 | 4.28e-13 | 71.6 |
MS.gene91201.t1 | AT4G09920 | 26.140 | 329 | 188 | 9 | 45 | 367 | 2 | 281 | 6.10e-13 | 70.1 |
MS.gene91201.t1 | AT4G09920 | 26.140 | 329 | 188 | 9 | 45 | 367 | 2 | 281 | 6.10e-13 | 70.1 |
MS.gene91201.t1 | AT5G38392 | 31.950 | 241 | 109 | 10 | 45 | 272 | 2 | 200 | 6.18e-13 | 68.6 |
MS.gene91201.t1 | AT5G53635 | 25.410 | 488 | 262 | 22 | 47 | 499 | 2 | 422 | 8.19e-13 | 70.9 |
MS.gene91201.t1 | AT1G48400 | 24.186 | 430 | 232 | 13 | 45 | 425 | 10 | 394 | 8.48e-13 | 70.9 |
MS.gene91201.t1 | AT1G66290 | 25.370 | 473 | 254 | 18 | 40 | 488 | 24 | 421 | 9.77e-13 | 70.5 |
MS.gene91201.t1 | AT3G54160 | 28.135 | 327 | 196 | 11 | 113 | 418 | 22 | 330 | 1.32e-12 | 70.1 |
MS.gene91201.t1 | AT4G09920 | 26.220 | 328 | 187 | 9 | 45 | 366 | 2 | 280 | 2.09e-12 | 68.2 |
MS.gene91201.t1 | AT4G09920 | 26.220 | 328 | 187 | 9 | 45 | 366 | 2 | 280 | 2.09e-12 | 68.2 |
MS.gene91201.t1 | AT4G09920 | 26.220 | 328 | 187 | 9 | 45 | 366 | 2 | 280 | 2.09e-12 | 68.2 |
MS.gene91201.t1 | AT5G35995 | 25.366 | 410 | 217 | 17 | 45 | 425 | 5 | 354 | 2.82e-12 | 69.3 |
MS.gene91201.t1 | AT5G35995 | 25.366 | 410 | 217 | 17 | 45 | 425 | 5 | 354 | 2.82e-12 | 69.3 |
MS.gene91201.t1 | AT5G22700 | 28.000 | 250 | 119 | 9 | 25 | 266 | 23 | 219 | 7.15e-12 | 67.8 |
MS.gene91201.t1 | AT2G29930 | 33.061 | 245 | 107 | 15 | 199 | 418 | 15 | 227 | 1.63e-11 | 66.2 |
MS.gene91201.t1 | AT3G60040 | 25.260 | 384 | 244 | 13 | 45 | 418 | 13 | 363 | 4.13e-11 | 65.9 |
MS.gene91201.t1 | AT3G60040 | 25.260 | 384 | 244 | 13 | 45 | 418 | 230 | 580 | 5.48e-11 | 65.5 |
MS.gene91201.t1 | AT3G60040 | 25.260 | 384 | 244 | 13 | 45 | 418 | 232 | 582 | 5.49e-11 | 65.5 |
MS.gene91201.t1 | AT3G60040 | 25.260 | 384 | 244 | 13 | 45 | 418 | 233 | 583 | 5.74e-11 | 65.9 |
MS.gene91201.t1 | AT3G60040 | 25.260 | 384 | 244 | 13 | 45 | 418 | 232 | 582 | 6.05e-11 | 65.5 |
MS.gene91201.t1 | AT1G66320 | 26.510 | 298 | 179 | 13 | 144 | 418 | 91 | 371 | 9.03e-11 | 64.7 |
Find 91 sgRNAs with CRISPR-Local
Find 146 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCATTACATTTGAATTTAA+AGG | 0.124626 | 4.1:-42104202 | MS.gene91201:CDS |
TGAAGATTTGATTTCTTCTT+TGG | 0.167215 | 4.1:+42105679 | None:intergenic |
CAATGTTCATGGATTCTAAA+TGG | 0.243177 | 4.1:-42106582 | MS.gene91201:CDS |
AGAAATCCTCCTTACTAGTA+TGG | 0.246783 | 4.1:-42104045 | MS.gene91201:CDS |
CTAAGGCTTGATAGCGAAAA+AGG | 0.263082 | 4.1:-42105509 | MS.gene91201:CDS |
ATTGCAAGATCCTTAAGTTT+TGG | 0.285282 | 4.1:+42104652 | None:intergenic |
GCAGATCGACTCCCATCTTT+TGG | 0.302315 | 4.1:+42105757 | None:intergenic |
TCTATCTGGTTGTCCACATT+TGG | 0.307537 | 4.1:-42105210 | MS.gene91201:CDS |
CTATATTCTCGGAGCGTCTT+TGG | 0.336573 | 4.1:+42105645 | None:intergenic |
GTTTCCAACCTCCTCTCTTC+GGG | 0.354469 | 4.1:+42104273 | None:intergenic |
TATTAGTTTGCCTATATTCT+CGG | 0.378070 | 4.1:+42105634 | None:intergenic |
AGTTTCCAACCTCCTCTCTT+CGG | 0.390900 | 4.1:+42104272 | None:intergenic |
GACAATGGTAGCAATGTTCA+TGG | 0.397699 | 4.1:-42106593 | None:intergenic |
TTTACTCAGGTGTTCAGCTC+AGG | 0.398055 | 4.1:-42105894 | MS.gene91201:CDS |
ACTCGTGGTCTTAAAATTGC+GGG | 0.408358 | 4.1:-42105360 | MS.gene91201:CDS |
TTTCTCTGATACCAAGTTCA+AGG | 0.409782 | 4.1:+42106518 | None:intergenic |
CAAAGACGCTCCGAGAATAT+AGG | 0.415150 | 4.1:-42105644 | MS.gene91201:CDS |
AAAGTGAAGGTTGGGAATCT+TGG | 0.417455 | 4.1:+42105733 | None:intergenic |
TTATACAAATTGTTAAAATC+CGG | 0.418633 | 4.1:+42104954 | None:intergenic |
ACAGATCCAAGTCAAGTTCC+TGG | 0.422138 | 4.1:+42105432 | None:intergenic |
ACAGAATGCTCCAAAACTTA+AGG | 0.424972 | 4.1:-42104662 | MS.gene91201:CDS |
ATCTGGTTGTCCACATTTGG+AGG | 0.433975 | 4.1:-42105207 | MS.gene91201:CDS |
ATTTCTTCTTTGGACATCAC+AGG | 0.436128 | 4.1:+42105689 | None:intergenic |
AGGAGGTTGGAAACTCTAGA+TGG | 0.436425 | 4.1:-42104264 | MS.gene91201:CDS |
TCAAAATATTAAAACTGAGT+TGG | 0.440622 | 4.1:-42104176 | MS.gene91201:CDS |
GGTAATTGAAAGTGAAGGTT+GGG | 0.443422 | 4.1:+42105725 | None:intergenic |
AATGTTCATGGATTCTAAAT+GGG | 0.451545 | 4.1:-42106581 | MS.gene91201:CDS |
CAAGGTCCAGGAACTTGACT+TGG | 0.457085 | 4.1:-42105438 | MS.gene91201:CDS |
ACTAATACTTGACAGTAAGA+TGG | 0.466673 | 4.1:-42105618 | MS.gene91201:CDS |
AAATTCAAATGTAATGAGAC+TGG | 0.466724 | 4.1:+42104207 | None:intergenic |
CATGTGTTCTATCCAAAAGA+TGG | 0.467948 | 4.1:-42105769 | MS.gene91201:CDS |
GTGACTCACACGTGGAAAGC+TGG | 0.470578 | 4.1:+42105381 | None:intergenic |
TCTTTGCATTTGCAAGCGTC+CGG | 0.481989 | 4.1:-42104973 | MS.gene91201:CDS |
GCCACATGATGTACACTTGT+GGG | 0.485379 | 4.1:-42105588 | MS.gene91201:CDS |
AAGGATCTTGCAATTGCGGT+TGG | 0.485603 | 4.1:-42104643 | MS.gene91201:CDS |
AATTTGTATAAACTCTTGAA+AGG | 0.493831 | 4.1:-42104942 | MS.gene91201:CDS |
AAGTAGGCATATATAACAAA+AGG | 0.493857 | 4.1:+42105117 | None:intergenic |
ACTTAAGGATCTTGCAATTG+CGG | 0.496044 | 4.1:-42104647 | MS.gene91201:CDS |
GGCATTAGATCTCAAGGTCC+AGG | 0.496808 | 4.1:-42105450 | MS.gene91201:CDS |
TGTACACTTGTGGGTTTCAA+AGG | 0.503354 | 4.1:-42105579 | MS.gene91201:CDS |
CTAATACTTGACAGTAAGAT+GGG | 0.504263 | 4.1:-42105617 | MS.gene91201:CDS |
AAATGTGAAAACCTTGAACT+TGG | 0.511512 | 4.1:-42106529 | MS.gene91201:intron |
TAGAATACGCCACAGTTTCA+CGG | 0.516230 | 4.1:+42105270 | None:intergenic |
GAAATCCTCCTTACTAGTAT+GGG | 0.519980 | 4.1:-42104044 | None:intergenic |
ACTTCGTACCCATACTAGTA+AGG | 0.520038 | 4.1:+42104036 | None:intergenic |
TCTCTTCAATAAGTGAAAAG+AGG | 0.524063 | 4.1:+42105145 | None:intergenic |
TGTACACATGTGGGTTTCAA+AGG | 0.528762 | 4.1:-42105471 | MS.gene91201:CDS |
ATCACAGGGTCTGAAATCTC+TGG | 0.529937 | 4.1:+42105704 | None:intergenic |
CCGAAAATATAAGAAAACTA+AGG | 0.538047 | 4.1:-42105526 | MS.gene91201:CDS |
CACTCGTGGTCTTAAAATTG+CGG | 0.539007 | 4.1:-42105361 | MS.gene91201:CDS |
TTCAAAGGCATTAGATCTCA+AGG | 0.542872 | 4.1:-42105456 | MS.gene91201:CDS |
AATGTCAAAACATTGGCTCT+CGG | 0.545588 | 4.1:-42104912 | MS.gene91201:CDS |
TTTCTTCTTTGGACATCACA+GGG | 0.548590 | 4.1:+42105690 | None:intergenic |
TGGTAATTGAAAGTGAAGGT+TGG | 0.551378 | 4.1:+42105724 | None:intergenic |
TGTTATGCAGTTTCTCAGCA+TGG | 0.553413 | 4.1:-42104788 | MS.gene91201:intron |
TGAAATCAATTCCCGAAGAG+AGG | 0.556742 | 4.1:-42104284 | MS.gene91201:CDS |
ATGTGTTCTATCCAAAAGAT+GGG | 0.563690 | 4.1:-42105768 | MS.gene91201:CDS |
ATCATGTCATAGCTTTACTC+AGG | 0.565108 | 4.1:-42105907 | MS.gene91201:intron |
GACGGGGCATTAATTTGTAG+TGG | 0.566180 | 4.1:+42105080 | None:intergenic |
ACTTTCTAATGTCAAAACAT+TGG | 0.567332 | 4.1:-42104919 | MS.gene91201:CDS |
CAGGTGTTCAGCTCAGGTCA+TGG | 0.572339 | 4.1:-42105888 | MS.gene91201:CDS |
GGACAACACTTAATAGAAGT+AGG | 0.574171 | 4.1:+42105101 | None:intergenic |
AAATATCTGAGAATTGCAGT+TGG | 0.586019 | 4.1:-42104705 | MS.gene91201:CDS |
TGAAAAGAAGAATTGAGTGT+TGG | 0.588267 | 4.1:+42105326 | None:intergenic |
AGACTGGTTGTAAGACATGC+CGG | 0.589947 | 4.1:+42104223 | None:intergenic |
AAGTGAAAAGAGGTGTTGAT+CGG | 0.590271 | 4.1:+42105155 | None:intergenic |
AAGAGCAGCTTCATCAAGAG+TGG | 0.591791 | 4.1:+42104992 | None:intergenic |
GGTGGAGCCATCAGTAACTC+CGG | 0.595318 | 4.1:-42104242 | MS.gene91201:CDS |
TCACACGTGGAAAGCTGGAG+CGG | 0.598731 | 4.1:+42105386 | None:intergenic |
TCACTCAAGTAAGTTGCAGA+AGG | 0.606565 | 4.1:-42104131 | MS.gene91201:CDS |
ACAAGTGTACATCATGTGGC+TGG | 0.606670 | 4.1:+42105591 | None:intergenic |
AATTCCCGAAGAGAGGAGGT+TGG | 0.607635 | 4.1:-42104277 | MS.gene91201:CDS |
AGACATGCCGGAGTTACTGA+TGG | 0.614504 | 4.1:+42104235 | None:intergenic |
GGAGGTTGGAAACTCTAGAT+GGG | 0.616468 | 4.1:-42104263 | MS.gene91201:CDS |
TCTTCATCTCCGTGAAACTG+TGG | 0.632446 | 4.1:-42105279 | MS.gene91201:CDS |
AATCAATTCCCGAAGAGAGG+AGG | 0.632647 | 4.1:-42104281 | MS.gene91201:CDS |
TTCCACGTGTGAGTCACTCG+TGG | 0.634670 | 4.1:-42105375 | MS.gene91201:CDS |
GGTTGGAAACTCTAGATGGG+TGG | 0.637888 | 4.1:-42104260 | MS.gene91201:CDS |
GGTGTTGATCGGTAATGCAA+AGG | 0.638827 | 4.1:+42105166 | None:intergenic |
AGCCACATGATGTACACTTG+TGG | 0.639873 | 4.1:-42105589 | MS.gene91201:CDS |
ACATGTGTACATCATGTGAC+TGG | 0.652666 | 4.1:+42105483 | None:intergenic |
AAAAGAAGTTCCTCCAAATG+TGG | 0.655154 | 4.1:+42105197 | None:intergenic |
CTCGTGGTCTTAAAATTGCG+GGG | 0.673910 | 4.1:-42105359 | MS.gene91201:CDS |
TCGTACCCATACTAGTAAGG+AGG | 0.674938 | 4.1:+42104039 | None:intergenic |
GTCACATGATGTACACATGT+GGG | 0.678429 | 4.1:-42105480 | MS.gene91201:CDS |
AGATGAAGAATCTTTAGCGA+CGG | 0.678834 | 4.1:+42105293 | None:intergenic |
GACCACGAGTGACTCACACG+TGG | 0.682798 | 4.1:+42105373 | None:intergenic |
ACCCACAAGTGTACATCATG+TGG | 0.692380 | 4.1:+42105587 | None:intergenic |
TCTCTGGTAATTGAAAGTGA+AGG | 0.696256 | 4.1:+42105720 | None:intergenic |
TATGCAGTTTCTCAGCATGG+AGG | 0.703511 | 4.1:-42104785 | MS.gene91201:intron |
AGTCACATGATGTACACATG+TGG | 0.706369 | 4.1:-42105481 | MS.gene91201:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | GAATTAATTAATTTGTTTAA+CGG | + | chr4.1:42106154-42106173 | None:intergenic | 10.0% |
!!! | TAAATACAAATGTTAATTTT+TGG | - | chr4.1:42106308-42106327 | MS.gene91201:intron | 10.0% |
!! | AGATAAAATTGTAAGTAAAA+TGG | + | chr4.1:42106240-42106259 | None:intergenic | 15.0% |
!! | TTATACAAATTGTTAAAATC+CGG | + | chr4.1:42105683-42105702 | None:intergenic | 15.0% |
!! | AAGTAAAATGGTTTAAAAGA+AGG | + | chr4.1:42106228-42106247 | None:intergenic | 20.0% |
!! | AATTTGTATAAACTCTTGAA+AGG | - | chr4.1:42105692-42105711 | MS.gene91201:CDS | 20.0% |
!! | CTCATTACATTTGAATTTAA+AGG | - | chr4.1:42106432-42106451 | MS.gene91201:intron | 20.0% |
!! | GATTGATAAATAGAAAATGA+TGG | + | chr4.1:42104613-42104632 | None:intergenic | 20.0% |
!! | TCAAAATATTAAAACTGAGT+TGG | - | chr4.1:42106458-42106477 | MS.gene91201:intron | 20.0% |
!!! | ATTTTTTATGAAGGGTAATA+TGG | - | chr4.1:42104348-42104367 | MS.gene91201:intron | 20.0% |
!!! | CCTTAGTTTTCTTATATTTT+CGG | + | chr4.1:42105111-42105130 | None:intergenic | 20.0% |
!!! | CTTTTAACATTTTCAAATCA+TGG | - | chr4.1:42104175-42104194 | MS.gene91201:CDS | 20.0% |
!!! | TTTTCACATTTTTCTGATAA+AGG | + | chr4.1:42104096-42104115 | None:intergenic | 20.0% |
!!! | TTTTTTATGAAGGGTAATAT+GGG | - | chr4.1:42104349-42104368 | MS.gene91201:intron | 20.0% |
! | AAATTCAAATGTAATGAGAC+TGG | + | chr4.1:42106430-42106449 | None:intergenic | 25.0% |
! | AAGTAACAAATCTTAGGAAT+AGG | + | chr4.1:42104644-42104663 | None:intergenic | 25.0% |
! | AAGTAGGCATATATAACAAA+AGG | + | chr4.1:42105520-42105539 | None:intergenic | 25.0% |
! | AATACCTAGTAAAAGATACA+TGG | - | chr4.1:42106113-42106132 | MS.gene91201:intron | 25.0% |
! | AATGAGAATAGAATTGCATA+TGG | + | chr4.1:42105817-42105836 | None:intergenic | 25.0% |
! | AATGTTCATGGATTCTAAAT+GGG | - | chr4.1:42104053-42104072 | MS.gene91201:CDS | 25.0% |
! | ACTTTCTAATGTCAAAACAT+TGG | - | chr4.1:42105715-42105734 | MS.gene91201:CDS | 25.0% |
! | AGTATATGCTATATATCAGT+TGG | - | chr4.1:42106285-42106304 | MS.gene91201:intron | 25.0% |
! | ATATGAAAAACTTCAAGTGA+CGG | + | chr4.1:42105575-42105594 | None:intergenic | 25.0% |
! | ATGAGAATAGAATTGCATAT+GGG | + | chr4.1:42105816-42105835 | None:intergenic | 25.0% |
! | CCGAAAATATAAGAAAACTA+AGG | - | chr4.1:42105108-42105127 | MS.gene91201:CDS | 25.0% |
! | TAAAAGAAGGTTAAATTGCT+AGG | + | chr4.1:42106215-42106234 | None:intergenic | 25.0% |
!! | TAGAAAATGATGGAAAATAG+AGG | + | chr4.1:42104603-42104622 | None:intergenic | 25.0% |
!! | TGAAGATTTGATTTCTTCTT+TGG | + | chr4.1:42104958-42104977 | None:intergenic | 25.0% |
!! | TTTGTGAAGTCATATTTTCT+AGG | + | chr4.1:42105617-42105636 | None:intergenic | 25.0% |
!!! | ATGTTGGTGATTTTTTATGA+AGG | - | chr4.1:42104339-42104358 | MS.gene91201:intron | 25.0% |
!!! | TAATTTTTGGTTTACATGCA+GGG | - | chr4.1:42106321-42106340 | MS.gene91201:intron | 25.0% |
!!! | TATTAGTTTGCCTATATTCT+CGG | + | chr4.1:42105003-42105022 | None:intergenic | 25.0% |
!!! | TGTTGGTGATTTTTTATGAA+GGG | - | chr4.1:42104340-42104359 | MS.gene91201:intron | 25.0% |
!!! | TTAATTTTTGGTTTACATGC+AGG | - | chr4.1:42106320-42106339 | MS.gene91201:intron | 25.0% |
AAATATCTGAGAATTGCAGT+TGG | - | chr4.1:42105929-42105948 | MS.gene91201:intron | 30.0% | |
AAATGTGAAAACCTTGAACT+TGG | - | chr4.1:42104105-42104124 | MS.gene91201:CDS | 30.0% | |
AACATAAGAAGCTGAAAATC+TGG | - | chr4.1:42106077-42106096 | MS.gene91201:intron | 30.0% | |
ACTAATACTTGACAGTAAGA+TGG | - | chr4.1:42105016-42105035 | MS.gene91201:CDS | 30.0% | |
AGTAGAAAAAAGTTTACGCA+AGG | - | chr4.1:42106560-42106579 | MS.gene91201:CDS | 30.0% | |
ATGTGTTCTATCCAAAAGAT+GGG | - | chr4.1:42104866-42104885 | MS.gene91201:intron | 30.0% | |
CAATGTTCATGGATTCTAAA+TGG | - | chr4.1:42104052-42104071 | MS.gene91201:CDS | 30.0% | |
CTAATACTTGACAGTAAGAT+GGG | - | chr4.1:42105017-42105036 | MS.gene91201:CDS | 30.0% | |
GTAGAAAAAAGTTTACGCAA+GGG | - | chr4.1:42106561-42106580 | MS.gene91201:CDS | 30.0% | |
TAGAAAAAAGTTTACGCAAG+GGG | - | chr4.1:42106562-42106581 | MS.gene91201:CDS | 30.0% | |
TATAGACATGATTTCGACAA+GGG | + | chr4.1:42104488-42104507 | None:intergenic | 30.0% | |
TATGAAAAACTTCAAGTGAC+GGG | + | chr4.1:42105574-42105593 | None:intergenic | 30.0% | |
TCTCTTCAATAAGTGAAAAG+AGG | + | chr4.1:42105492-42105511 | None:intergenic | 30.0% | |
TGAAAAGAAGAATTGAGTGT+TGG | + | chr4.1:42105311-42105330 | None:intergenic | 30.0% | |
TTATAGACATGATTTCGACA+AGG | + | chr4.1:42104489-42104508 | None:intergenic | 30.0% | |
TTCCAGAAGTAACAAATCTT+AGG | + | chr4.1:42104650-42104669 | None:intergenic | 30.0% | |
! | AACTCCATGTATCTTTTACT+AGG | + | chr4.1:42106120-42106139 | None:intergenic | 30.0% |
! | ACATTTTATCAGCTGAAACT+TGG | + | chr4.1:42104392-42104411 | None:intergenic | 30.0% |
! | ATTGCAAGATCCTTAAGTTT+TGG | + | chr4.1:42105985-42106004 | None:intergenic | 30.0% |
!! | TGAGGTTTTTCAAACAATGT+TGG | - | chr4.1:42104323-42104342 | MS.gene91201:intron | 30.0% |
!! | TTCCTAAGATTTGTTACTTC+TGG | - | chr4.1:42104645-42104664 | MS.gene91201:CDS | 30.0% |
AAAAGAAGTTCCTCCAAATG+TGG | + | chr4.1:42105440-42105459 | None:intergenic | 35.0% | |
AACAAGACAGAACAACATTC+AGG | - | chr4.1:42104274-42104293 | MS.gene91201:CDS | 35.0% | |
ACAGAATGCTCCAAAACTTA+AGG | - | chr4.1:42105972-42105991 | MS.gene91201:intron | 35.0% | |
ACATTTGTACAAACATTGCC+CGG | - | chr4.1:42104540-42104559 | MS.gene91201:intron | 35.0% | |
ACTTAAGGATCTTGCAATTG+CGG | - | chr4.1:42105987-42106006 | MS.gene91201:intron | 35.0% | |
AGAAATCCTCCTTACTAGTA+TGG | - | chr4.1:42106589-42106608 | MS.gene91201:CDS | 35.0% | |
AGATGAAGAATCTTTAGCGA+CGG | + | chr4.1:42105344-42105363 | None:intergenic | 35.0% | |
ATGAAAAACTTCAAGTGACG+GGG | + | chr4.1:42105573-42105592 | None:intergenic | 35.0% | |
ATGGTCCAAATCAAAAGCAA+TGG | - | chr4.1:42104194-42104213 | MS.gene91201:CDS | 35.0% | |
ATTTCTTCTTTGGACATCAC+AGG | + | chr4.1:42104948-42104967 | None:intergenic | 35.0% | |
CATGTGTTCTATCCAAAAGA+TGG | - | chr4.1:42104865-42104884 | MS.gene91201:intron | 35.0% | |
CTATCATTCCCTCAAAAGAT+GGG | + | chr4.1:42104244-42104263 | None:intergenic | 35.0% | |
CTGTATATAGAAGCAATGAC+CGG | + | chr4.1:42104562-42104581 | None:intergenic | 35.0% | |
GGACAACACTTAATAGAAGT+AGG | + | chr4.1:42105536-42105555 | None:intergenic | 35.0% | |
GGTAATTGAAAGTGAAGGTT+GGG | + | chr4.1:42104912-42104931 | None:intergenic | 35.0% | |
GTGAAAAAGAGACCTTAACA+AGG | + | chr4.1:42104424-42104443 | None:intergenic | 35.0% | |
TATCATTCCCTCAAAAGATG+GGG | + | chr4.1:42104243-42104262 | None:intergenic | 35.0% | |
TCTATCATTCCCTCAAAAGA+TGG | + | chr4.1:42104245-42104264 | None:intergenic | 35.0% | |
TCTCTGGTAATTGAAAGTGA+AGG | + | chr4.1:42104917-42104936 | None:intergenic | 35.0% | |
TGCATATGGGAGACTAAATA+TGG | + | chr4.1:42105803-42105822 | None:intergenic | 35.0% | |
TGGTAATTGAAAGTGAAGGT+TGG | + | chr4.1:42104913-42104932 | None:intergenic | 35.0% | |
TGTATATAGAAGCAATGACC+GGG | + | chr4.1:42104561-42104580 | None:intergenic | 35.0% | |
TTTCTCTGATACCAAGTTCA+AGG | + | chr4.1:42104119-42104138 | None:intergenic | 35.0% | |
TTTCTTCTTTGGACATCACA+GGG | + | chr4.1:42104947-42104966 | None:intergenic | 35.0% | |
! | ATCATGTCATAGCTTTACTC+AGG | - | chr4.1:42104727-42104746 | MS.gene91201:CDS | 35.0% |
! | GCTCTCAATGATTTTCTATC+TGG | - | chr4.1:42105410-42105429 | MS.gene91201:CDS | 35.0% |
!! | AAGTGAAAAGAGGTGTTGAT+CGG | + | chr4.1:42105482-42105501 | None:intergenic | 35.0% |
!! | AATGTCAAAACATTGGCTCT+CGG | - | chr4.1:42105722-42105741 | MS.gene91201:CDS | 35.0% |
!! | GGTTTCCATTGCTTTTGATT+TGG | + | chr4.1:42104202-42104221 | None:intergenic | 35.0% |
!! | TTATATTTTCGGTGCGTCTT+AGG | + | chr4.1:42105100-42105119 | None:intergenic | 35.0% |
!! | TTCAAAGGCATTAGATCTCA+AGG | - | chr4.1:42105178-42105197 | MS.gene91201:CDS | 35.0% |
!!! | GAACAACATTCAGGTTGTTT+TGG | - | chr4.1:42104283-42104302 | MS.gene91201:CDS | 35.0% |
!!! | GCGGCAATAAAACTTTTTCA+TGG | + | chr4.1:42105232-42105251 | None:intergenic | 35.0% |
!!! | TCAGGTTGTTTTGGTCTTTT+TGG | - | chr4.1:42104292-42104311 | MS.gene91201:CDS | 35.0% |
AAAGTGAAGGTTGGGAATCT+TGG | + | chr4.1:42104904-42104923 | None:intergenic | 40.0% | |
ACATGTGTACATCATGTGAC+TGG | + | chr4.1:42105154-42105173 | None:intergenic | 40.0% | |
AGTCACATGATGTACACATG+TGG | - | chr4.1:42105153-42105172 | MS.gene91201:CDS | 40.0% | |
GTCACATGATGTACACATGT+GGG | - | chr4.1:42105154-42105173 | MS.gene91201:CDS | 40.0% | |
TAGAATACGCCACAGTTTCA+CGG | + | chr4.1:42105367-42105386 | None:intergenic | 40.0% | |
TATCAGCTGAAACTTGGCTT+AGG | + | chr4.1:42104386-42104405 | None:intergenic | 40.0% | |
TCACTCAAGTAAGTTGCAGA+AGG | - | chr4.1:42106503-42106522 | MS.gene91201:intron | 40.0% | |
TCTATCTGGTTGTCCACATT+TGG | - | chr4.1:42105424-42105443 | MS.gene91201:CDS | 40.0% | |
TGAAATCAATTCCCGAAGAG+AGG | - | chr4.1:42106350-42106369 | MS.gene91201:intron | 40.0% | |
TGTACACATGTGGGTTTCAA+AGG | - | chr4.1:42105163-42105182 | MS.gene91201:CDS | 40.0% | |
TGTACACTTGTGGGTTTCAA+AGG | - | chr4.1:42105055-42105074 | MS.gene91201:CDS | 40.0% | |
TGTTATGCAGTTTCTCAGCA+TGG | - | chr4.1:42105846-42105865 | MS.gene91201:CDS | 40.0% | |
! | ACTCGTGGTCTTAAAATTGC+GGG | - | chr4.1:42105274-42105293 | MS.gene91201:CDS | 40.0% |
! | CACTCGTGGTCTTAAAATTG+CGG | - | chr4.1:42105273-42105292 | MS.gene91201:CDS | 40.0% |
! | TGTTGCTTGAGACCTTGTTA+AGG | - | chr4.1:42104409-42104428 | MS.gene91201:intron | 40.0% |
! | TTCTGAACCCCATCTTTTGA+GGG | - | chr4.1:42104233-42104252 | MS.gene91201:CDS | 40.0% |
!! | CTAAGGCTTGATAGCGAAAA+AGG | - | chr4.1:42105125-42105144 | MS.gene91201:CDS | 40.0% |
!! | GTCTTTTTGGCAGAAAGTTG+AGG | - | chr4.1:42104305-42104324 | MS.gene91201:intron | 40.0% |
AAGAGCAGCTTCATCAAGAG+TGG | + | chr4.1:42105645-42105664 | None:intergenic | 45.0% | |
AAGGATCTTGCAATTGCGGT+TGG | - | chr4.1:42105991-42106010 | MS.gene91201:intron | 45.0% | |
AATCAATTCCCGAAGAGAGG+AGG | - | chr4.1:42106353-42106372 | MS.gene91201:intron | 45.0% | |
ACAAGTGTACATCATGTGGC+TGG | + | chr4.1:42105046-42105065 | None:intergenic | 45.0% | |
ACAGATCCAAGTCAAGTTCC+TGG | + | chr4.1:42105205-42105224 | None:intergenic | 45.0% | |
ACCCACAAGTGTACATCATG+TGG | + | chr4.1:42105050-42105069 | None:intergenic | 45.0% | |
AGCCACATGATGTACACTTG+TGG | - | chr4.1:42105045-42105064 | MS.gene91201:CDS | 45.0% | |
AGGAGGTTGGAAACTCTAGA+TGG | - | chr4.1:42106370-42106389 | MS.gene91201:intron | 45.0% | |
AGTTTCCAACCTCCTCTCTT+CGG | + | chr4.1:42106365-42106384 | None:intergenic | 45.0% | |
ATCTGGTTGTCCACATTTGG+AGG | - | chr4.1:42105427-42105446 | MS.gene91201:CDS | 45.0% | |
CAAAGACGCTCCGAGAATAT+AGG | - | chr4.1:42104990-42105009 | MS.gene91201:CDS | 45.0% | |
GCCACATGATGTACACTTGT+GGG | - | chr4.1:42105046-42105065 | MS.gene91201:CDS | 45.0% | |
GGAGGTTGGAAACTCTAGAT+GGG | - | chr4.1:42106371-42106390 | MS.gene91201:intron | 45.0% | |
GGGTTCAGAACAAGACATCA+AGG | + | chr4.1:42104223-42104242 | None:intergenic | 45.0% | |
TATGCAGTTTCTCAGCATGG+AGG | - | chr4.1:42105849-42105868 | MS.gene91201:CDS | 45.0% | |
TCTTCATCTCCGTGAAACTG+TGG | - | chr4.1:42105355-42105374 | MS.gene91201:CDS | 45.0% | |
TCTTTGCATTTGCAAGCGTC+CGG | - | chr4.1:42105661-42105680 | MS.gene91201:CDS | 45.0% | |
TTTACTCAGGTGTTCAGCTC+AGG | - | chr4.1:42104740-42104759 | MS.gene91201:CDS | 45.0% | |
! | AGACTGGTTGTAAGACATGC+CGG | + | chr4.1:42106414-42106433 | None:intergenic | 45.0% |
! | ATCACAGGGTCTGAAATCTC+TGG | + | chr4.1:42104933-42104952 | None:intergenic | 45.0% |
! | CTATATTCTCGGAGCGTCTT+TGG | + | chr4.1:42104992-42105011 | None:intergenic | 45.0% |
! | CTCGTGGTCTTAAAATTGCG+GGG | - | chr4.1:42105275-42105294 | MS.gene91201:CDS | 45.0% |
!! | GACGGGGCATTAATTTGTAG+TGG | + | chr4.1:42105557-42105576 | None:intergenic | 45.0% |
!! | GGTGTTGATCGGTAATGCAA+AGG | + | chr4.1:42105471-42105490 | None:intergenic | 45.0% |
!! | GTTCTGAACCCCATCTTTTG+AGG | - | chr4.1:42104232-42104251 | MS.gene91201:CDS | 45.0% |
!! | ATTAAAAAAGAAAAATATTT+AGG | + | chr4.1:42105772-42105791 | None:intergenic | 5.0% |
AATTCCCGAAGAGAGGAGGT+TGG | - | chr4.1:42106357-42106376 | MS.gene91201:intron | 50.0% | |
AGACATGCCGGAGTTACTGA+TGG | + | chr4.1:42106402-42106421 | None:intergenic | 50.0% | |
CAAGGTCCAGGAACTTGACT+TGG | - | chr4.1:42105196-42105215 | MS.gene91201:CDS | 50.0% | |
GGCATTAGATCTCAAGGTCC+AGG | - | chr4.1:42105184-42105203 | MS.gene91201:CDS | 50.0% | |
GGTTGGAAACTCTAGATGGG+TGG | - | chr4.1:42106374-42106393 | MS.gene91201:intron | 50.0% | |
GTTTCCAACCTCCTCTCTTC+GGG | + | chr4.1:42106364-42106383 | None:intergenic | 50.0% | |
!! | GCAGATCGACTCCCATCTTT+TGG | + | chr4.1:42104880-42104899 | None:intergenic | 50.0% |
CAGGTGTTCAGCTCAGGTCA+TGG | - | chr4.1:42104746-42104765 | MS.gene91201:CDS | 55.0% | |
GGTGGAGCCATCAGTAACTC+CGG | - | chr4.1:42106392-42106411 | MS.gene91201:intron | 55.0% | |
GTGACTCACACGTGGAAAGC+TGG | + | chr4.1:42105256-42105275 | None:intergenic | 55.0% | |
TCACACGTGGAAAGCTGGAG+CGG | + | chr4.1:42105251-42105270 | None:intergenic | 55.0% | |
TTCCACGTGTGAGTCACTCG+TGG | - | chr4.1:42105259-42105278 | MS.gene91201:CDS | 55.0% | |
GACCACGAGTGACTCACACG+TGG | + | chr4.1:42105264-42105283 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 42104045 | 42106611 | 42104045 | ID=MS.gene91201 |
chr4.1 | mRNA | 42104045 | 42106611 | 42104045 | ID=MS.gene91201.t1;Parent=MS.gene91201 |
chr4.1 | exon | 42106530 | 42106611 | 42106530 | ID=MS.gene91201.t1.exon1;Parent=MS.gene91201.t1 |
chr4.1 | CDS | 42106530 | 42106611 | 42106530 | ID=cds.MS.gene91201.t1;Parent=MS.gene91201.t1 |
chr4.1 | exon | 42104896 | 42105917 | 42104896 | ID=MS.gene91201.t1.exon2;Parent=MS.gene91201.t1 |
chr4.1 | CDS | 42104896 | 42105917 | 42104896 | ID=cds.MS.gene91201.t1;Parent=MS.gene91201.t1 |
chr4.1 | exon | 42104633 | 42104800 | 42104633 | ID=MS.gene91201.t1.exon3;Parent=MS.gene91201.t1 |
chr4.1 | CDS | 42104633 | 42104800 | 42104633 | ID=cds.MS.gene91201.t1;Parent=MS.gene91201.t1 |
chr4.1 | exon | 42104045 | 42104314 | 42104045 | ID=MS.gene91201.t1.exon4;Parent=MS.gene91201.t1 |
chr4.1 | CDS | 42104045 | 42104314 | 42104045 | ID=cds.MS.gene91201.t1;Parent=MS.gene91201.t1 |
Gene Sequence |
Protein sequence |