AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene07664


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07664.t1 MTR_4g056020 91.554 296 25 0 1 296 1 296 0.0 551
MS.gene07664.t1 MTR_4g056030 87.162 296 38 0 1 296 1 296 0.0 521
MS.gene07664.t1 MTR_4g055990 80.180 333 29 2 1 296 1 333 2.18e-180 508
MS.gene07664.t1 MTR_4g055990 80.180 333 29 2 1 296 1 333 4.59e-180 507
MS.gene07664.t1 MTR_4g055580 78.679 333 33 3 1 296 92 423 1.62e-179 509
MS.gene07664.t1 MTR_4g056070 75.893 336 41 1 1 296 1 336 7.85e-176 494
MS.gene07664.t1 MTR_4g056040 76.074 326 48 1 1 296 1 326 1.26e-174 493
MS.gene07664.t1 MTR_1g038710 69.536 302 86 2 1 296 11 312 6.15e-136 393
MS.gene07664.t1 MTR_1g090883 61.953 297 109 3 2 296 12 306 5.97e-115 337
MS.gene07664.t1 MTR_4g093690 57.353 272 107 6 1 268 10 276 1.17e-87 264
MS.gene07664.t1 MTR_1g090900 67.797 177 54 2 1 174 1 177 1.81e-70 218
MS.gene07664.t1 MTR_4g056010 91.919 99 8 0 69 167 2 100 8.86e-59 184
MS.gene07664.t1 MTR_7g110920 53.500 200 56 2 99 296 1 165 4.39e-58 190
MS.gene07664.t1 MTR_1g041245 36.842 190 106 6 9 193 11 191 2.06e-23 99.4
MS.gene07664.t1 MTR_8g468810 32.500 320 170 15 4 297 20 319 1.22e-22 96.3
MS.gene07664.t1 MTR_8g468810 32.390 318 169 15 4 295 20 317 3.48e-22 95.1
MS.gene07664.t1 MTR_4g032730 32.899 307 160 14 9 290 15 300 8.09e-22 95.9
MS.gene07664.t1 MTR_8g468810 32.258 310 167 14 4 290 20 309 1.38e-21 94.0
MS.gene07664.t1 MTR_5g084070 31.875 320 180 13 5 311 9 303 2.15e-21 94.4
MS.gene07664.t1 MTR_8g468810 32.258 310 167 14 4 290 20 309 2.18e-21 93.6
MS.gene07664.t1 MTR_8g468810 32.258 310 167 14 4 290 20 309 2.21e-21 94.4
MS.gene07664.t1 MTR_5g080710 35.688 269 141 11 9 266 33 280 2.38e-21 94.4
MS.gene07664.t1 MTR_2g083840 32.143 308 171 14 9 294 21 312 2.91e-21 94.0
MS.gene07664.t1 MTR_8g445780 31.353 303 172 9 9 294 13 296 3.21e-20 90.5
MS.gene07664.t1 MTR_8g467800 33.333 306 174 11 5 294 16 307 3.35e-20 90.1
MS.gene07664.t1 MTR_8g062310 35.071 211 116 9 9 213 25 220 1.14e-19 89.4
MS.gene07664.t1 MTR_8g467800 33.333 306 174 11 5 294 16 307 1.30e-19 89.4
MS.gene07664.t1 MTR_0492s0020 36.923 195 103 9 9 199 86 264 3.49e-19 87.8
MS.gene07664.t1 MTR_0543s0010 36.923 195 103 9 9 199 86 264 3.92e-19 87.8
MS.gene07664.t1 MTR_3g107100 33.163 196 114 5 5 193 7 192 5.54e-19 87.0
MS.gene07664.t1 MTR_8g468840 31.169 308 178 13 8 294 13 307 5.63e-19 87.4
MS.gene07664.t1 MTR_7g034115 37.824 193 100 7 9 193 11 191 5.86e-19 86.7
MS.gene07664.t1 MTR_8g062270 31.494 308 176 11 9 294 16 310 7.59e-19 87.0
MS.gene07664.t1 MTR_8g014160 29.674 337 179 13 2 304 34 346 1.23e-18 86.3
MS.gene07664.t1 MTR_8g058970 30.878 353 179 16 4 312 14 345 1.92e-18 85.9
MS.gene07664.t1 MTR_8g014260 32.819 259 136 9 6 241 13 256 9.46e-18 84.0
MS.gene07664.t1 MTR_7g007080 30.345 290 155 13 7 279 2 261 2.04e-17 82.4
MS.gene07664.t1 MTR_7g032380 33.158 190 113 5 9 193 11 191 2.47e-17 82.0
MS.gene07664.t1 MTR_2g005990 31.401 207 114 7 9 196 6 203 3.81e-17 81.6
MS.gene07664.t1 MTR_2g007500 35.417 192 97 7 9 193 14 185 5.51e-17 80.5
MS.gene07664.t1 MTR_7g098570 35.789 190 107 6 9 193 20 199 8.89e-17 80.9
MS.gene07664.t1 MTR_7g115270 35.025 197 108 9 9 193 12 200 9.40e-17 80.5
MS.gene07664.t1 MTR_8g062080 33.493 209 115 8 1 196 15 212 9.50e-17 80.9
MS.gene07664.t1 MTR_8g085430 34.158 202 102 8 9 193 11 198 1.07e-16 79.7
MS.gene07664.t1 MTR_6g022360 32.821 195 107 6 3 193 37 211 1.11e-16 80.5
MS.gene07664.t1 MTR_7g033945 36.628 172 85 7 9 165 11 173 1.42e-16 76.6
MS.gene07664.t1 MTR_1g053025 33.010 206 113 9 9 199 2 197 1.99e-16 79.7
MS.gene07664.t1 MTR_7g056447 34.742 213 122 8 1 206 1 203 2.10e-16 78.6
MS.gene07664.t1 MTR_1g013560 32.683 205 117 5 5 197 15 210 2.30e-16 79.0
MS.gene07664.t1 MTR_3g108560 38.342 193 97 8 6 193 17 192 3.26e-16 78.2
MS.gene07664.t1 MTR_3g108560 38.342 193 97 8 6 193 17 192 3.97e-16 78.6
MS.gene07664.t1 MTR_6g011460 33.778 225 122 10 9 223 46 253 4.18e-16 79.0
MS.gene07664.t1 MTR_7g033915 34.392 189 97 8 9 193 11 176 4.33e-16 78.2
MS.gene07664.t1 MTR_8g468760 33.218 289 149 14 1 264 1 270 5.05e-16 78.6
MS.gene07664.t1 MTR_1g013560 32.057 209 121 5 1 197 11 210 5.08e-16 78.6
MS.gene07664.t1 MTR_8g062010 35.149 202 109 8 1 191 1 191 5.55e-16 78.6
MS.gene07664.t1 MTR_8g469020 34.783 207 110 10 9 193 7 210 5.63e-16 78.6
MS.gene07664.t1 MTR_7g034110 31.383 188 121 4 9 193 11 193 6.52e-16 77.8
MS.gene07664.t1 MTR_4g050250 33.962 212 107 9 9 193 21 226 6.79e-16 78.2
MS.gene07664.t1 MTR_5g045510 33.161 193 108 9 9 193 12 191 8.20e-16 77.8
MS.gene07664.t1 MTR_2g007400 32.701 211 113 9 9 199 12 213 8.40e-16 77.8
MS.gene07664.t1 MTR_5g073420 31.282 195 114 5 9 193 11 195 1.39e-15 77.0
MS.gene07664.t1 MTR_3g107160 30.693 202 120 6 2 193 3 194 3.27e-15 75.9
MS.gene07664.t1 MTR_6g045333 33.503 197 113 7 9 196 61 248 4.92e-15 75.9
MS.gene07664.t1 MTR_1g085120 34.184 196 104 11 9 193 179 360 5.55e-15 75.5
MS.gene07664.t1 MTR_8g070950 33.163 196 113 5 6 193 12 197 6.88e-15 75.1
MS.gene07664.t1 MTR_1g085120 34.184 196 104 11 9 193 167 348 7.20e-15 75.5
MS.gene07664.t1 MTR_7g055943 32.857 210 117 9 3 204 34 227 7.95e-15 75.1
MS.gene07664.t1 MTR_7g026500 31.841 201 111 8 8 193 13 202 9.24e-15 74.7
MS.gene07664.t1 MTR_1g085120 34.184 196 104 11 9 193 92 273 1.09e-14 74.7
MS.gene07664.t1 MTR_7g056433 33.810 210 123 9 4 206 7 207 1.86e-14 73.6
MS.gene07664.t1 MTR_7g033990 29.000 200 123 5 9 199 11 200 2.12e-14 73.6
MS.gene07664.t1 MTR_7g060470 31.019 216 127 7 9 214 3 206 3.71e-14 72.8
MS.gene07664.t1 MTR_7g098510 32.275 189 119 3 7 193 16 197 4.04e-14 72.8
MS.gene07664.t1 MTR_3g108150 34.574 188 110 7 8 193 12 188 4.48e-14 72.4
MS.gene07664.t1 MTR_1g108820 33.158 190 111 7 9 194 8 185 4.50e-14 72.4
MS.gene07664.t1 MTR_8g058965 33.498 203 116 8 9 193 13 214 5.68e-14 72.4
MS.gene07664.t1 MTR_3g023630 31.579 190 116 6 9 193 8 188 5.73e-14 72.0
MS.gene07664.t1 MTR_2g007450 30.317 221 126 7 1 199 8 222 9.02e-14 72.0
MS.gene07664.t1 MTR_1g108820 33.158 190 111 7 9 194 8 185 1.21e-13 71.2
MS.gene07664.t1 MTR_2g047848 31.905 210 116 9 4 198 2 199 1.41e-13 71.2
MS.gene07664.t1 MTR_5g007410 31.863 204 110 10 11 201 28 215 1.52e-13 71.2
MS.gene07664.t1 MTR_4g039440 34.031 191 106 9 9 193 34 210 2.00e-13 70.9
MS.gene07664.t1 MTR_2g008320 30.964 197 119 6 9 197 52 239 2.40e-13 70.5
MS.gene07664.t1 MTR_6g022500 33.679 193 109 10 9 193 101 282 3.07e-13 70.5
MS.gene07664.t1 MTR_5g061680 34.359 195 106 10 9 193 11 193 3.11e-13 69.7
MS.gene07664.t1 MTR_1g066830 31.771 192 113 9 9 193 8 188 5.43e-13 69.3
MS.gene07664.t1 MTR_5g021550 36.486 148 79 5 5 137 15 162 5.87e-13 66.2
MS.gene07664.t1 MTR_5g058100 31.500 200 119 9 1 193 1 189 7.64e-13 68.9
MS.gene07664.t1 MTR_7g007340 33.333 192 102 5 4 195 8 173 7.70e-13 68.9
MS.gene07664.t1 MTR_8g017280 31.905 210 118 7 8 209 35 227 9.84e-13 67.8
MS.gene07664.t1 MTR_2g036470 30.876 217 111 11 9 207 14 209 1.36e-12 68.2
MS.gene07664.t1 MTR_3g023270 32.778 180 104 6 5 177 8 177 1.40e-12 67.8
MS.gene07664.t1 MTR_8g017280 31.905 210 118 7 8 209 35 227 1.95e-12 67.8
MS.gene07664.t1 MTR_5g058350 31.892 185 96 6 9 193 8 162 2.10e-12 65.1
MS.gene07664.t1 MTR_4g134150 29.032 186 120 4 8 193 13 186 2.27e-12 65.9
MS.gene07664.t1 MTR_1g115245 30.814 172 101 4 4 163 21 186 2.47e-12 67.0
MS.gene07664.t1 MTR_1g014450 31.308 214 119 8 4 201 11 212 2.72e-12 67.4
MS.gene07664.t1 MTR_4g050930 28.195 266 171 8 7 264 27 280 2.80e-12 67.4
MS.gene07664.t1 MTR_5g045170 28.846 208 95 6 11 193 16 195 2.95e-12 67.0
MS.gene07664.t1 MTR_3g040700 30.102 196 123 6 4 193 38 225 3.03e-12 67.4
MS.gene07664.t1 MTR_3g107120 31.604 212 116 6 1 193 1 202 3.35e-12 67.0
MS.gene07664.t1 MTR_2g047858 33.816 207 104 8 9 198 115 305 3.51e-12 67.4
MS.gene07664.t1 MTR_4g024780 31.765 170 99 8 5 164 142 304 4.38e-12 67.0
MS.gene07664.t1 MTR_3g036250 30.500 200 113 6 6 193 2 187 4.44e-12 66.6
MS.gene07664.t1 MTR_2g008310 30.000 200 123 7 9 202 2 190 4.54e-12 66.6
MS.gene07664.t1 MTR_4g050930 28.195 266 171 8 7 264 27 280 5.67e-12 66.6
MS.gene07664.t1 MTR_5g058000 30.570 193 115 8 9 194 8 188 6.30e-12 66.2
MS.gene07664.t1 MTR_3g071850 32.995 197 114 7 9 196 24 211 6.48e-12 66.6
MS.gene07664.t1 MTR_5g008950 31.937 191 105 8 11 193 1 174 7.60e-12 65.9
MS.gene07664.t1 MTR_6g040270 34.211 190 107 9 11 193 10 188 7.61e-12 65.9
MS.gene07664.t1 MTR_5g040850 30.435 207 119 7 4 196 2 197 7.71e-12 65.9
MS.gene07664.t1 MTR_1089s0010 32.995 197 110 9 6 193 5 188 8.82e-12 65.9
MS.gene07664.t1 MTR_1g016340 28.972 214 124 6 5 201 16 218 1.03e-11 65.9
MS.gene07664.t1 MTR_1g107385 33.171 205 111 7 9 193 32 230 1.06e-11 65.5
MS.gene07664.t1 MTR_1g016340 28.972 214 124 6 5 201 11 213 1.11e-11 65.5
MS.gene07664.t1 MTR_2g082800 35.714 168 92 7 4 163 22 181 1.12e-11 65.5
MS.gene07664.t1 MTR_7g098480 29.707 239 150 5 7 234 16 247 1.18e-11 65.5
MS.gene07664.t1 MTR_1g021825 30.500 200 120 5 4 195 12 200 1.25e-11 65.5
MS.gene07664.t1 MTR_1g021825 30.500 200 120 5 4 195 83 271 1.27e-11 65.5
MS.gene07664.t1 MTR_3g110010 34.197 193 113 6 4 193 8 189 1.29e-11 65.9
MS.gene07664.t1 MTR_3g114200 30.405 148 90 4 7 146 17 159 1.37e-11 62.4
MS.gene07664.t1 MTR_1g013840 31.795 195 106 8 9 187 56 239 1.55e-11 65.1
MS.gene07664.t1 MTR_5g039950 26.974 304 169 9 4 297 18 278 1.55e-11 65.1
MS.gene07664.t1 MTR_7g033940 34.259 108 69 1 11 116 96 203 1.58e-11 63.5
MS.gene07664.t1 MTR_6g022390 33.088 136 73 6 9 129 5 137 1.60e-11 62.0
MS.gene07664.t1 MTR_3g109982 34.197 193 113 6 4 193 8 189 1.69e-11 65.5
MS.gene07664.t1 MTR_1g021820 33.824 204 113 8 4 197 23 214 1.79e-11 65.1
MS.gene07664.t1 MTR_7g021630 32.000 200 110 7 6 192 14 200 1.90e-11 64.7
MS.gene07664.t1 MTR_7g023310 27.551 196 128 8 4 195 22 207 1.97e-11 64.7
MS.gene07664.t1 MTR_7g021630 32.000 200 110 7 6 192 14 200 2.13e-11 64.3
MS.gene07664.t1 MTR_8g077460 33.953 215 118 7 1 198 1 208 2.49e-11 64.3
MS.gene07664.t1 MTR_2g082880 34.507 142 87 4 4 141 5 144 3.27e-11 63.9
MS.gene07664.t1 MTR_3g099900 34.146 164 99 5 6 163 15 175 3.51e-11 63.9
MS.gene07664.t1 MTR_8g467790 34.634 205 99 10 9 193 148 337 3.91e-11 63.9
MS.gene07664.t1 MTR_5g040130 77.143 35 8 0 8 42 60 94 4.14e-11 59.3
MS.gene07664.t1 MTR_1g013630 30.924 249 138 10 5 229 35 273 4.17e-11 63.5
MS.gene07664.t1 MTR_7g075820 31.797 217 118 9 9 201 6 216 4.28e-11 63.5
MS.gene07664.t1 MTR_1g013580 27.751 209 126 4 1 195 11 208 4.31e-11 63.9
MS.gene07664.t1 MTR_5g065100 31.250 192 108 8 11 193 10 186 4.72e-11 63.5
MS.gene07664.t1 MTR_4g047950 31.707 164 106 4 5 163 9 171 4.96e-11 63.5
MS.gene07664.t1 MTR_3g463820 55.102 49 22 0 3 51 7 55 5.20e-11 62.8
MS.gene07664.t1 MTR_2g007100 39.024 82 46 1 9 90 2 79 5.24e-11 58.5
MS.gene07664.t1 MTR_5g083890 31.897 232 118 10 8 208 5 227 5.28e-11 63.5
MS.gene07664.t1 MTR_3g082890 33.333 144 80 5 6 141 14 149 5.92e-11 63.5
MS.gene07664.t1 MTR_3g082890 33.333 144 80 5 6 141 94 229 7.61e-11 63.2
MS.gene07664.t1 MTR_2g099980 31.928 166 102 5 6 163 35 197 7.78e-11 63.2
MS.gene07664.t1 MTR_7g088260 30.102 196 118 7 4 193 86 268 8.68e-11 62.8
MS.gene07664.t1 MTR_0009s0080 31.500 200 109 9 7 193 16 200 8.69e-11 62.8
MS.gene07664.t1 MTR_7g017280 30.588 170 102 6 6 164 145 309 8.99e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07664.t1 AT4G14103 32.288 319 169 11 9 297 8 309 5.87e-27 109
MS.gene07664.t1 AT4G14103 32.288 319 169 11 9 297 8 309 5.87e-27 109
MS.gene07664.t1 AT4G14103 32.288 319 169 11 9 297 8 309 1.26e-26 109
MS.gene07664.t1 AT4G00315 32.792 308 163 13 9 290 2 291 3.93e-26 107
MS.gene07664.t1 AT1G55660 31.475 305 171 12 9 290 53 342 4.03e-26 106
MS.gene07664.t1 AT1G55660 31.475 305 171 12 9 290 53 342 8.51e-26 107
MS.gene07664.t1 AT4G14096 29.260 311 184 10 8 297 7 302 7.64e-23 98.6
MS.gene07664.t1 AT4G14096 29.260 311 184 10 8 297 7 302 7.64e-23 98.6
MS.gene07664.t1 AT3G59190 30.154 325 178 12 9 297 12 323 1.71e-22 97.1
MS.gene07664.t1 AT3G59190 30.154 325 178 12 9 297 12 323 2.53e-22 97.4
MS.gene07664.t1 AT4G22280 34.237 295 164 12 9 292 2 277 6.54e-22 94.7
MS.gene07664.t1 AT1G51370 37.306 193 107 6 7 198 17 196 1.41e-21 94.0
MS.gene07664.t1 AT3G58920 29.969 327 174 11 9 294 2 314 1.94e-21 94.7
MS.gene07664.t1 AT4G22280 34.130 293 167 11 9 292 2 277 2.59e-21 94.0
MS.gene07664.t1 AT1G51370 37.113 194 108 6 7 199 17 197 3.13e-21 93.6
MS.gene07664.t1 AT5G38396 31.056 322 176 12 9 296 2 311 3.61e-21 94.0
MS.gene07664.t1 AT1G51370 37.113 194 108 6 7 199 17 197 3.70e-21 93.6
MS.gene07664.t1 AT4G10400 28.808 302 180 10 9 298 2 280 4.35e-21 93.2
MS.gene07664.t1 AT4G10400 28.808 302 180 10 9 298 2 280 4.35e-21 93.2
MS.gene07664.t1 AT4G10400 28.808 302 180 10 9 298 2 280 4.35e-21 93.2
MS.gene07664.t1 AT4G00320 28.746 327 189 10 3 294 7 324 5.47e-21 93.6
MS.gene07664.t1 AT3G03030 28.834 326 185 10 9 297 2 317 7.04e-21 91.7
MS.gene07664.t1 AT5G56380 32.776 299 160 12 9 279 2 287 9.81e-21 92.4
MS.gene07664.t1 AT5G56380 32.776 299 160 12 9 279 2 287 9.81e-21 92.4
MS.gene07664.t1 AT3G59210 32.000 325 175 12 5 297 3 313 1.25e-20 92.4
MS.gene07664.t1 AT3G59210 32.000 325 175 12 5 297 3 313 1.25e-20 92.4
MS.gene07664.t1 AT3G59210 32.000 325 175 12 5 297 3 313 1.25e-20 92.4
MS.gene07664.t1 AT3G59210 32.000 325 175 12 5 297 3 313 1.25e-20 92.4
MS.gene07664.t1 AT3G59210 32.000 325 175 12 5 297 3 313 1.25e-20 92.4
MS.gene07664.t1 AT3G03030 28.834 326 185 10 9 297 2 317 1.89e-20 92.0
MS.gene07664.t1 AT5G41840 29.143 350 191 11 9 311 14 353 3.18e-20 91.3
MS.gene07664.t1 AT3G58860 29.677 310 185 11 6 297 4 298 5.45e-20 90.5
MS.gene07664.t1 AT3G59230 33.784 222 125 5 9 213 12 228 5.48e-20 90.5
MS.gene07664.t1 AT5G41830 30.650 323 180 10 3 290 7 320 7.00e-20 90.5
MS.gene07664.t1 AT4G15060 28.882 322 187 13 6 305 23 324 1.14e-19 89.4
MS.gene07664.t1 AT3G03040 28.882 322 183 7 9 296 2 311 1.18e-19 89.4
MS.gene07664.t1 AT4G15060 28.302 318 187 11 9 304 172 470 2.36e-19 89.0
MS.gene07664.t1 AT5G38392 36.364 209 105 7 9 199 2 200 2.51e-19 85.1
MS.gene07664.t1 AT1G58310 29.290 338 176 11 9 297 8 331 4.16e-19 88.2
MS.gene07664.t1 AT4G13960 35.859 198 107 5 9 196 2 189 4.87e-19 87.8
MS.gene07664.t1 AT4G13960 35.859 198 107 5 9 196 2 189 4.87e-19 87.8
MS.gene07664.t1 AT5G56440 31.855 248 145 8 9 245 2 236 5.17e-19 87.4
MS.gene07664.t1 AT3G50710 31.890 254 139 11 9 244 2 239 5.24e-19 87.4
MS.gene07664.t1 AT3G59160 26.724 348 182 11 9 297 13 346 6.77e-19 87.4
MS.gene07664.t1 AT4G09920 27.986 293 192 9 9 295 2 281 2.40e-18 84.3
MS.gene07664.t1 AT4G09920 27.986 293 192 9 9 295 2 281 2.40e-18 84.3
MS.gene07664.t1 AT4G09920 27.907 301 198 9 9 303 2 289 2.62e-18 84.0
MS.gene07664.t1 AT4G09920 27.907 301 198 9 9 303 2 289 2.62e-18 84.0
MS.gene07664.t1 AT4G09920 27.907 301 198 9 9 303 2 289 2.62e-18 84.0
MS.gene07664.t1 AT3G59200 29.091 330 177 14 8 297 6 318 3.44e-18 84.3
MS.gene07664.t1 AT5G56400 29.900 301 181 12 9 298 33 314 4.93e-18 84.7
MS.gene07664.t1 AT5G22670 35.938 192 103 8 8 193 10 187 7.77e-18 84.0
MS.gene07664.t1 AT5G38590 27.961 304 191 10 9 303 2 286 1.60e-17 81.6
MS.gene07664.t1 AT3G59200 29.394 330 176 15 8 297 6 318 1.92e-17 83.2
MS.gene07664.t1 AT3G62440 29.968 317 177 14 9 290 2 308 3.84e-17 82.0
MS.gene07664.t1 AT3G59000 33.645 214 113 9 9 195 2 213 4.33e-17 81.3
MS.gene07664.t1 AT4G00160 34.286 245 140 9 9 243 16 249 4.49e-17 82.0
MS.gene07664.t1 AT3G58980 27.660 329 202 10 9 312 2 319 4.93e-17 82.0
MS.gene07664.t1 AT5G38590 28.094 299 187 10 9 298 2 281 5.12e-17 81.6
MS.gene07664.t1 AT2G26030 33.508 191 114 7 9 195 4 185 6.24e-17 81.3
MS.gene07664.t1 AT2G26030 33.508 191 114 7 9 195 4 185 6.24e-17 81.3
MS.gene07664.t1 AT3G58900 29.538 325 180 9 9 297 2 313 6.82e-17 80.5
MS.gene07664.t1 AT3G58900 29.538 325 180 9 9 297 2 313 6.82e-17 80.5
MS.gene07664.t1 AT3G42770 31.596 307 165 12 14 294 4 291 7.00e-17 81.6
MS.gene07664.t1 AT2G26030 33.508 191 114 7 9 195 4 185 7.03e-17 81.3
MS.gene07664.t1 AT3G58900 29.814 322 183 9 9 297 2 313 7.26e-17 80.1
MS.gene07664.t1 AT5G22700 29.102 323 167 13 7 294 4 299 7.75e-17 81.3
MS.gene07664.t1 AT5G22700 29.102 323 167 13 7 294 4 299 7.75e-17 81.3
MS.gene07664.t1 AT5G22700 29.102 323 167 13 7 294 4 299 7.75e-17 81.3
MS.gene07664.t1 AT5G22700 29.102 323 167 13 7 294 4 299 7.75e-17 81.3
MS.gene07664.t1 AT3G26922 33.198 247 140 11 8 244 13 244 8.75e-17 79.7
MS.gene07664.t1 AT3G26922 33.198 247 140 11 8 244 13 244 8.75e-17 79.7
MS.gene07664.t1 AT1G06630 29.630 351 185 15 8 316 11 341 9.26e-17 80.1
MS.gene07664.t1 AT1G06630 29.630 351 185 15 8 316 11 341 9.26e-17 80.1
MS.gene07664.t1 AT1G69630 27.679 336 210 10 2 315 11 335 9.61e-17 80.9
MS.gene07664.t1 AT5G22700 29.412 323 166 13 7 294 41 336 9.78e-17 80.9
MS.gene07664.t1 AT3G58900 29.814 322 183 9 9 297 2 313 1.23e-16 80.5
MS.gene07664.t1 AT5G60610 36.649 191 104 8 9 195 2 179 1.33e-16 80.1
MS.gene07664.t1 AT5G60610 36.649 191 104 8 9 195 2 179 1.33e-16 80.1
MS.gene07664.t1 AT3G58960 28.479 309 186 11 9 292 2 300 1.48e-16 80.5
MS.gene07664.t1 AT2G26860 30.584 291 179 10 9 290 2 278 1.51e-16 80.1
MS.gene07664.t1 AT2G26860 30.584 291 179 10 9 290 2 278 1.51e-16 80.1
MS.gene07664.t1 AT4G26340 28.720 289 182 11 9 290 2 273 1.64e-16 80.1
MS.gene07664.t1 AT1G06630 32.459 305 163 14 9 290 12 296 1.64e-16 79.0
MS.gene07664.t1 AT1G06630 29.630 351 185 15 8 316 11 341 1.64e-16 80.1
MS.gene07664.t1 AT1G06630 29.630 351 185 15 8 316 11 341 1.64e-16 80.1
MS.gene07664.t1 AT1G06630 29.630 351 185 15 8 316 11 341 1.64e-16 80.1
MS.gene07664.t1 AT1G06630 29.630 351 185 15 8 316 11 341 1.64e-16 80.1
MS.gene07664.t1 AT1G06630 29.630 351 185 15 8 316 20 350 1.86e-16 79.7
MS.gene07664.t1 AT2G42720 37.000 200 108 10 9 197 2 194 2.04e-16 79.7
MS.gene07664.t1 AT1G78760 28.344 314 184 15 7 297 14 309 2.52e-16 79.7
MS.gene07664.t1 AT3G62430 30.872 298 183 12 9 292 2 290 3.07e-16 79.3
MS.gene07664.t1 AT5G22700 35.000 200 96 8 7 193 41 219 4.01e-16 79.0
MS.gene07664.t1 AT1G06630 29.714 350 184 15 9 316 12 341 4.57e-16 79.0
MS.gene07664.t1 AT3G58880 26.300 327 208 8 9 311 3 320 7.55e-16 78.2
MS.gene07664.t1 AT5G53840 35.025 197 109 8 7 198 16 198 1.17e-15 77.8
MS.gene07664.t1 AT3G59000 35.795 176 96 6 9 169 2 175 1.22e-15 77.8
MS.gene07664.t1 AT5G56370 34.409 186 110 6 9 191 2 178 1.95e-15 76.3
MS.gene07664.t1 AT5G56420 35.417 192 111 8 8 195 5 187 2.38e-15 76.6
MS.gene07664.t1 AT5G56420 35.417 192 111 8 8 195 5 187 2.38e-15 76.6
MS.gene07664.t1 AT5G56420 35.417 192 111 8 8 195 5 187 2.38e-15 76.6
MS.gene07664.t1 AT5G56370 34.409 186 110 6 9 191 2 178 3.35e-15 76.3
MS.gene07664.t1 AT5G56370 34.409 186 110 6 9 191 2 178 3.35e-15 76.3
MS.gene07664.t1 AT3G59150 29.338 317 184 14 9 297 13 317 3.60e-15 76.3
MS.gene07664.t1 AT5G53635 30.195 308 174 14 11 295 2 291 3.81e-15 75.9
MS.gene07664.t1 AT1G16930 35.500 200 99 9 9 196 15 196 4.39e-15 75.9
MS.gene07664.t1 AT1G16930 35.500 200 99 9 9 196 15 196 4.39e-15 75.9
MS.gene07664.t1 AT1G16930 35.500 200 99 9 9 196 15 196 4.39e-15 75.9
MS.gene07664.t1 AT3G44060 34.272 213 121 11 14 217 4 206 4.48e-15 75.9
MS.gene07664.t1 AT5G44950 32.245 245 143 11 9 243 4 235 4.51e-15 75.9
MS.gene07664.t1 AT5G38386 24.752 303 163 10 9 297 2 253 7.27e-15 75.1
MS.gene07664.t1 AT5G38386 24.752 303 163 10 9 297 2 253 7.27e-15 75.1
MS.gene07664.t1 AT3G59240 27.393 303 189 10 9 290 8 300 8.62e-15 75.1
MS.gene07664.t1 AT5G18780 34.302 172 87 7 8 167 10 167 3.08e-14 73.2
MS.gene07664.t1 AT5G18780 34.302 172 87 7 8 167 10 167 3.08e-14 73.2
MS.gene07664.t1 AT5G44490 31.527 203 111 7 4 193 12 199 3.89e-14 73.2
MS.gene07664.t1 AT5G44490 31.527 203 111 7 4 193 12 199 4.64e-14 72.8
MS.gene07664.t1 AT3G52680 35.204 196 105 7 9 195 21 203 4.90e-14 72.4
MS.gene07664.t1 AT3G58930 26.727 333 189 9 9 297 2 323 6.30e-14 72.4
MS.gene07664.t1 AT3G58930 26.727 333 189 9 9 297 2 323 6.30e-14 72.4
MS.gene07664.t1 AT3G58930 26.727 333 189 9 9 297 2 323 6.30e-14 72.4
MS.gene07664.t1 AT3G56780 31.746 189 113 6 11 195 9 185 6.58e-14 72.0
MS.gene07664.t1 AT3G56780 31.746 189 113 6 11 195 9 185 6.60e-14 72.4
MS.gene07664.t1 AT3G56780 31.746 189 113 6 11 195 9 185 6.99e-14 72.4
MS.gene07664.t1 AT5G18780 34.302 172 87 7 8 167 10 167 8.86e-14 72.0
MS.gene07664.t1 AT5G18780 34.302 172 87 7 8 167 10 167 8.86e-14 72.0
MS.gene07664.t1 AT3G52680 35.204 196 105 7 9 195 21 203 9.08e-14 72.0
MS.gene07664.t1 AT4G26350 31.606 193 117 5 9 196 2 184 1.11e-13 71.6
MS.gene07664.t1 AT1G52650 31.658 199 113 6 9 195 2 189 1.25e-13 71.6
MS.gene07664.t1 AT3G49150 27.673 318 187 12 7 297 14 315 1.32e-13 71.6
MS.gene07664.t1 AT1G66300 31.754 211 115 8 3 198 15 211 1.55e-13 71.2
MS.gene07664.t1 AT1G78750 26.708 322 198 12 9 303 18 328 1.66e-13 71.2
MS.gene07664.t1 AT1G78750 26.708 322 198 12 9 303 18 328 1.66e-13 71.2
MS.gene07664.t1 AT1G66290 27.640 322 192 12 4 303 24 326 2.14e-13 70.9
MS.gene07664.t1 AT5G56690 31.295 278 158 12 11 271 4 265 2.19e-13 70.5
MS.gene07664.t1 AT1G48400 28.929 280 160 10 9 266 10 272 2.50e-13 70.9
MS.gene07664.t1 AT5G38570 29.236 301 177 10 9 290 2 285 2.95e-13 70.1
MS.gene07664.t1 AT2G29930 29.283 321 166 17 9 296 12 304 2.96e-13 70.5
MS.gene07664.t1 AT2G29930 29.283 321 166 17 9 296 12 304 2.96e-13 70.5
MS.gene07664.t1 AT5G22720 32.487 197 115 6 4 193 18 203 3.16e-13 70.5
MS.gene07664.t1 AT1G48400 29.137 278 158 10 9 264 10 270 3.57e-13 70.1
MS.gene07664.t1 AT5G38590 33.582 134 87 2 9 140 2 135 4.79e-13 68.6
MS.gene07664.t1 AT5G53640 30.688 189 117 6 7 193 20 196 5.63e-13 67.8
MS.gene07664.t1 AT5G22730 31.313 198 119 6 8 199 27 213 5.63e-13 69.3
MS.gene07664.t1 AT5G22730 31.313 198 119 6 8 199 27 213 6.43e-13 69.3
MS.gene07664.t1 AT5G22730 31.313 198 119 6 8 199 27 213 6.43e-13 69.3
MS.gene07664.t1 AT3G58940 27.273 308 186 8 9 296 2 291 6.65e-13 69.7
MS.gene07664.t1 AT3G58940 27.273 308 186 8 9 296 2 291 6.65e-13 69.7
MS.gene07664.t1 AT3G60040 28.000 325 194 10 9 305 13 325 6.96e-13 69.7
MS.gene07664.t1 AT3G60040 28.000 325 194 10 9 305 230 542 8.34e-13 69.3
MS.gene07664.t1 AT3G60040 28.000 325 194 10 9 305 232 544 8.58e-13 69.3
MS.gene07664.t1 AT2G29910 31.579 190 116 6 9 195 5 183 9.23e-13 68.6
MS.gene07664.t1 AT2G29910 31.579 190 116 6 9 195 5 183 9.23e-13 68.6
MS.gene07664.t1 AT2G29910 31.579 190 116 6 9 195 5 183 9.23e-13 68.6
MS.gene07664.t1 AT2G29910 31.579 190 116 6 9 195 5 183 9.23e-13 68.6
MS.gene07664.t1 AT2G29910 31.579 190 116 6 9 195 29 207 1.01e-12 68.6
MS.gene07664.t1 AT5G38390 33.333 198 107 10 9 199 2 181 1.05e-12 68.9
MS.gene07664.t1 AT2G29910 31.250 192 118 6 7 195 3 183 1.09e-12 68.2
MS.gene07664.t1 AT2G29910 31.250 192 118 6 7 195 3 183 1.09e-12 68.2
MS.gene07664.t1 AT3G60040 28.000 325 194 10 9 305 232 544 1.13e-12 68.9
MS.gene07664.t1 AT3G60040 28.000 325 194 10 9 305 233 545 1.16e-12 68.9
MS.gene07664.t1 AT4G13965 29.545 308 152 15 9 290 10 278 1.85e-12 67.8
MS.gene07664.t1 AT5G22610 33.000 200 114 9 8 197 17 206 1.93e-12 68.2
MS.gene07664.t1 AT5G35995 27.950 322 170 15 9 297 5 297 2.09e-12 67.8
MS.gene07664.t1 AT5G35995 27.950 322 170 15 9 297 5 297 2.09e-12 67.8
MS.gene07664.t1 AT5G22610 33.000 200 114 9 8 197 17 206 2.10e-12 67.8
MS.gene07664.t1 AT5G56560 32.308 195 121 6 6 198 2 187 2.43e-12 67.4
MS.gene07664.t1 AT4G13985 33.005 203 114 10 4 193 14 207 2.56e-12 67.8
MS.gene07664.t1 AT2G04230 30.315 254 141 9 8 241 12 249 2.93e-12 67.4
MS.gene07664.t1 AT5G25850 32.984 191 106 8 9 193 20 194 4.07e-12 67.0
MS.gene07664.t1 AT5G18770 26.821 302 196 8 9 294 24 316 4.26e-12 66.6
MS.gene07664.t1 AT5G56560 32.308 195 121 6 6 198 2 187 4.86e-12 67.0
MS.gene07664.t1 AT1G32375 30.522 249 146 10 9 243 2 237 5.86e-12 66.2
MS.gene07664.t1 AT1G32375 30.522 249 146 10 9 243 2 237 5.86e-12 66.2
MS.gene07664.t1 AT5G18770 26.733 303 197 8 8 294 23 316 7.58e-12 66.2
MS.gene07664.t1 AT5G41630 26.269 335 181 12 9 294 12 329 1.09e-11 65.9
MS.gene07664.t1 AT5G56410 28.889 270 141 12 9 245 2 253 1.30e-11 65.5
MS.gene07664.t1 AT1G66320 26.582 316 193 13 4 296 25 324 1.31e-11 65.5
MS.gene07664.t1 AT1G66310 26.019 319 201 10 4 303 14 316 1.51e-11 65.1
MS.gene07664.t1 AT1G55030 28.044 271 156 11 9 264 9 255 1.62e-11 65.1
MS.gene07664.t1 AT1G55030 28.044 271 156 11 9 264 19 265 1.62e-11 65.1
MS.gene07664.t1 AT3G58820 33.333 159 92 3 9 153 2 160 1.77e-11 65.1
MS.gene07664.t1 AT5G56820 31.579 190 110 7 9 193 15 189 1.94e-11 64.7
MS.gene07664.t1 AT3G49030 31.076 251 144 9 7 244 19 253 2.80e-11 64.3
MS.gene07664.t1 AT1G05080 32.540 252 144 11 8 246 12 250 4.22e-11 63.9
MS.gene07664.t1 AT3G49030 31.076 251 144 9 7 244 19 253 4.96e-11 63.5
MS.gene07664.t1 AT5G15620 28.990 307 172 11 9 290 2 287 5.31e-11 63.5
MS.gene07664.t1 AT5G22660 25.796 314 189 11 8 295 12 307 5.34e-11 63.2
MS.gene07664.t1 AT2G42730 30.348 201 122 7 9 197 5 199 5.83e-11 63.5
MS.gene07664.t1 AT3G44810 28.664 307 179 11 11 292 9 300 8.64e-11 62.8

Find 55 sgRNAs with CRISPR-Local

Find 74 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCACAAATTTGATTTCTT+TGG 0.190993 4.1:-42426583 None:intergenic
ACTCGTGGTGTTAAAATTGC+GGG 0.388609 4.1:+42426791 MS.gene07664:CDS
ATATAATAGGCTCAAAAGTC+TGG 0.400206 4.1:+42427589 MS.gene07664:intron
AAAGTGAAGGTTGGGAATCT+TGG 0.417455 4.1:-42426529 None:intergenic
ACAGATCCAAGTCAAGTTCC+TGG 0.422138 4.1:-42426719 None:intergenic
ATATGACAAATCAAATCGTC+TGG 0.437735 4.1:-42426435 None:intergenic
GGTAATTGAAAGTGAAGGTT+GGG 0.443422 4.1:-42426537 None:intergenic
CAAGGTCCAGGAACTTGACT+TGG 0.457085 4.1:+42426713 MS.gene07664:CDS
AAGTGAAAAGAGGTGTTGAT+AGG 0.462824 4.1:-42426996 None:intergenic
GTATACAAATTGTTAAAATC+CGG 0.478212 4.1:-42427200 None:intergenic
AAGTAGGCATATATAAAGTA+AGG 0.479565 4.1:-42427034 None:intergenic
TTGATTTCTTTGGACAACTC+AGG 0.483223 4.1:-42426573 None:intergenic
GGCATTAGATCTCAAGGTCC+AGG 0.496808 4.1:+42426701 MS.gene07664:CDS
TCTTTGCATTTGTAAGCGTC+CGG 0.498367 4.1:+42427181 MS.gene07664:CDS
AATTTGTATACACTCTTGAA+AGG 0.500652 4.1:+42427212 MS.gene07664:CDS
TGATTTCTTTGGACAACTCA+GGG 0.514750 4.1:-42426572 None:intergenic
AACTCAGGGTCTGAAATCTC+TGG 0.516045 4.1:-42426558 None:intergenic
TAGAATACGCCACAGTTTCA+CGG 0.516230 4.1:-42426881 None:intergenic
TACTTTATATATGCCTACTT+CGG 0.518831 4.1:+42427037 MS.gene07664:CDS
TCTCTTCAATAAGTGAAAAG+AGG 0.524063 4.1:-42427006 None:intergenic
TGTACACATGTGGGTTTCAA+AGG 0.528762 4.1:+42426680 MS.gene07664:CDS
GATAGGTAATGCAAAGGTCT+CGG 0.536969 4.1:-42426979 None:intergenic
CACTCGTGGTGTTAAAATTG+CGG 0.539050 4.1:+42426790 MS.gene07664:CDS
TAGAAAGAACTTCAAGTGAA+GGG 0.540099 4.1:-42427091 None:intergenic
CATGTGTTCTATCCACAAGA+TGG 0.542093 4.1:+42426493 MS.gene07664:CDS
TTCAAAGGCATTAGATCTCA+AGG 0.542872 4.1:+42426695 MS.gene07664:CDS
CAACACTTAATAACCGAAGT+AGG 0.548618 4.1:-42427050 None:intergenic
TGGTAATTGAAAGTGAAGGT+TGG 0.551378 4.1:-42426538 None:intergenic
CTAAGTCTTGATAGCAACAA+AGG 0.551526 4.1:+42426642 MS.gene07664:CDS
ATAGAAAGAACTTCAAGTGA+AGG 0.561374 4.1:-42427092 None:intergenic
GAAGGGGCATTAATTTGTAG+TGG 0.570310 4.1:-42427074 None:intergenic
GCAGATCGACTCCCATCTTG+TGG 0.572297 4.1:-42426505 None:intergenic
GCACTAGAAGAGCAAAGACT+TGG 0.574185 4.1:+42427611 MS.gene07664:CDS
ATGTGTTCTATCCACAAGAT+GGG 0.579779 4.1:+42426494 MS.gene07664:CDS
AAGACTTGGCGAAATATACA+TGG 0.582588 4.1:+42427625 MS.gene07664:CDS
AAAAGAAGTTCCTCTAGATG+TGG 0.586225 4.1:-42426954 None:intergenic
ATCTGGTTGTCCACATCTAG+AGG 0.586521 4.1:+42426944 MS.gene07664:CDS
AATGTCAAAACAATGGCTCT+CGG 0.589429 4.1:+42427242 MS.gene07664:CDS
TGAAATGAAGAATTGAGTGT+TGG 0.595088 4.1:-42426825 None:intergenic
AGAAAGAACTTCAAGTGAAG+GGG 0.603765 4.1:-42427090 None:intergenic
TATGACAAATCAAATCGTCT+GGG 0.610234 4.1:-42426434 None:intergenic
TCTTCATCTCCGTGAAACTG+TGG 0.632446 4.1:+42426872 MS.gene07664:CDS
GGTGTTGATAGGTAATGCAA+AGG 0.643336 4.1:-42426985 None:intergenic
AAGAGCAGCTTCATCAACAG+TGG 0.644416 4.1:-42427162 None:intergenic
ACTTTCTAATGTCAAAACAA+TGG 0.645666 4.1:+42427235 MS.gene07664:CDS
GCCACATGATGTACACATGT+GGG 0.650684 4.1:+42426671 MS.gene07664:CDS
ACATGTGTACATCATGTGGC+TGG 0.656362 4.1:-42426668 None:intergenic
AGATGAAGAATCTTTAGTGA+CGG 0.657169 4.1:-42426858 None:intergenic
TTCCACGTGTGAGTCACTCG+TGG 0.657233 4.1:+42426776 MS.gene07664:CDS
CACCACGAGTGACTCACACG+TGG 0.657543 4.1:-42426778 None:intergenic
CTCGTGGTGTTAAAATTGCG+GGG 0.670217 4.1:+42426792 MS.gene07664:CDS
ACCCACATGTGTACATCATG+TGG 0.672342 4.1:-42426672 None:intergenic
AGCCACATGATGTACACATG+TGG 0.685172 4.1:+42426670 MS.gene07664:CDS
TCTCTGGTAATTGAAAGTGA+AGG 0.696256 4.1:-42426542 None:intergenic
TCACACGTGGAAAGCCTAAG+CGG 0.701582 4.1:-42426765 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAGATGAAATATAAT+AGG + chr4.1:42427576-42427595 MS.gene07664:intron 10.0%
!!! ACTTAGTTTTCTTATATTTT+CGG - chr4.1:42426628-42426647 None:intergenic 15.0%
!! ATAATAAATTGTGAAAAGTG+AGG - chr4.1:42427417-42427436 None:intergenic 20.0%
!! GTATACAAATTGTTAAAATC+CGG - chr4.1:42427203-42427222 None:intergenic 20.0%
!!! ATTCACAAATTTGATTTCTT+TGG - chr4.1:42426586-42426605 None:intergenic 20.0%
!!! TTCTATTGTTGATTTTTCAT+TGG + chr4.1:42427109-42427128 MS.gene07664:CDS 20.0%
!!! TTTGTAAAGTCATATTTTCT+TGG - chr4.1:42427137-42427156 None:intergenic 20.0%
! AAGTAGGCATATATAAAGTA+AGG - chr4.1:42427037-42427056 None:intergenic 25.0%
! AATGAGAATAGAATTGCATA+TGG - chr4.1:42427337-42427356 None:intergenic 25.0%
! AATTTGTATACACTCTTGAA+AGG + chr4.1:42427212-42427231 MS.gene07664:CDS 25.0%
! ACTTTCTAATGTCAAAACAA+TGG + chr4.1:42427235-42427254 MS.gene07664:CDS 25.0%
! ATGAGAATAGAATTGCATAT+GGG - chr4.1:42427336-42427355 None:intergenic 25.0%
! TACTTTATATATGCCTACTT+CGG + chr4.1:42427037-42427056 MS.gene07664:CDS 25.0%
!! ACTTAAGGATTTTGCAATTA+TGG + chr4.1:42427507-42427526 MS.gene07664:intron 25.0%
!! ATTGCAAAATCCTTAAGTTT+TGG - chr4.1:42427505-42427524 None:intergenic 25.0%
!! GATCTCAATAATTTTCTATC+TGG + chr4.1:42426927-42426946 MS.gene07664:CDS 25.0%
!! TATAAGACTCTTTTGTTGAT+AGG - chr4.1:42426470-42426489 None:intergenic 25.0%
AAATATCTGAGAATTGCAGT+TGG + chr4.1:42427449-42427468 MS.gene07664:intron 30.0%
AGATGAAGAATCTTTAGTGA+CGG - chr4.1:42426861-42426880 None:intergenic 30.0%
ATAGAAAGAACTTCAAGTGA+AGG - chr4.1:42427095-42427114 None:intergenic 30.0%
ATATAATAGGCTCAAAAGTC+TGG + chr4.1:42427589-42427608 MS.gene07664:intron 30.0%
ATATGACAAATCAAATCGTC+TGG - chr4.1:42426438-42426457 None:intergenic 30.0%
TAGAAAGAACTTCAAGTGAA+GGG - chr4.1:42427094-42427113 None:intergenic 30.0%
TATGACAAATCAAATCGTCT+GGG - chr4.1:42426437-42426456 None:intergenic 30.0%
TCTCTTCAATAAGTGAAAAG+AGG - chr4.1:42427009-42427028 None:intergenic 30.0%
TGAAATGAAGAATTGAGTGT+TGG - chr4.1:42426828-42426847 None:intergenic 30.0%
! AAAAAATCTTATTGCCGCTT+AGG + chr4.1:42426751-42426770 MS.gene07664:CDS 30.0%
AAAAGAAGTTCCTCTAGATG+TGG - chr4.1:42426957-42426976 None:intergenic 35.0%
AAGACTTGGCGAAATATACA+TGG + chr4.1:42427625-42427644 MS.gene07664:CDS 35.0%
AATGTCAAAACAATGGCTCT+CGG + chr4.1:42427242-42427261 MS.gene07664:CDS 35.0%
ACAGAATGCTCCAAAACTTA+AGG + chr4.1:42427492-42427511 MS.gene07664:intron 35.0%
AGAAAGAACTTCAAGTGAAG+GGG - chr4.1:42427093-42427112 None:intergenic 35.0%
ATGTGTTCTATCCACAAGAT+GGG + chr4.1:42426494-42426513 MS.gene07664:CDS 35.0%
CAACACTTAATAACCGAAGT+AGG - chr4.1:42427053-42427072 None:intergenic 35.0%
GGTAATTGAAAGTGAAGGTT+GGG - chr4.1:42426540-42426559 None:intergenic 35.0%
TCTCTGGTAATTGAAAGTGA+AGG - chr4.1:42426545-42426564 None:intergenic 35.0%
TGATTTCTTTGGACAACTCA+GGG - chr4.1:42426575-42426594 None:intergenic 35.0%
TGCATATGGGTGACTAAATA+TGG - chr4.1:42427323-42427342 None:intergenic 35.0%
TGGTAATTGAAAGTGAAGGT+TGG - chr4.1:42426541-42426560 None:intergenic 35.0%
TGTTATGCAGTTTCTCAACA+TGG + chr4.1:42427366-42427385 MS.gene07664:intron 35.0%
TTGATTTCTTTGGACAACTC+AGG - chr4.1:42426576-42426595 None:intergenic 35.0%
! CTAAGTCTTGATAGCAACAA+AGG + chr4.1:42426642-42426661 MS.gene07664:CDS 35.0%
!! AAGTGAAAAGAGGTGTTGAT+AGG - chr4.1:42426999-42427018 None:intergenic 35.0%
!! TTATATTTTCGGTGCGTCTT+AGG - chr4.1:42426617-42426636 None:intergenic 35.0%
!! TTCAAAGGCATTAGATCTCA+AGG + chr4.1:42426695-42426714 MS.gene07664:CDS 35.0%
!!! GCGGCAATAAGATTTTTTCA+TGG - chr4.1:42426749-42426768 None:intergenic 35.0%
AAAGTGAAGGTTGGGAATCT+TGG - chr4.1:42426532-42426551 None:intergenic 40.0%
CATGTGTTCTATCCACAAGA+TGG + chr4.1:42426493-42426512 MS.gene07664:CDS 40.0%
GATAGGTAATGCAAAGGTCT+CGG - chr4.1:42426982-42427001 None:intergenic 40.0%
TAGAATACGCCACAGTTTCA+CGG - chr4.1:42426884-42426903 None:intergenic 40.0%
TATGCAGTTTCTCAACATGG+AGG + chr4.1:42427369-42427388 MS.gene07664:intron 40.0%
TCTTTGCATTTGTAAGCGTC+CGG + chr4.1:42427181-42427200 MS.gene07664:CDS 40.0%
TGTACACATGTGGGTTTCAA+AGG + chr4.1:42426680-42426699 MS.gene07664:CDS 40.0%
! ACTCGTGGTGTTAAAATTGC+GGG + chr4.1:42426791-42426810 MS.gene07664:CDS 40.0%
! CACTCGTGGTGTTAAAATTG+CGG + chr4.1:42426790-42426809 MS.gene07664:CDS 40.0%
!! GAAGGGGCATTAATTTGTAG+TGG - chr4.1:42427077-42427096 None:intergenic 40.0%
!! GGTGTTGATAGGTAATGCAA+AGG - chr4.1:42426988-42427007 None:intergenic 40.0%
AAGAGCAGCTTCATCAACAG+TGG - chr4.1:42427165-42427184 None:intergenic 45.0%
ACAGATCCAAGTCAAGTTCC+TGG - chr4.1:42426722-42426741 None:intergenic 45.0%
ACATGTGTACATCATGTGGC+TGG - chr4.1:42426671-42426690 None:intergenic 45.0%
ACCCACATGTGTACATCATG+TGG - chr4.1:42426675-42426694 None:intergenic 45.0%
AGCCACATGATGTACACATG+TGG + chr4.1:42426670-42426689 MS.gene07664:CDS 45.0%
ATCTGGTTGTCCACATCTAG+AGG + chr4.1:42426944-42426963 MS.gene07664:CDS 45.0%
GCACTAGAAGAGCAAAGACT+TGG + chr4.1:42427611-42427630 MS.gene07664:CDS 45.0%
GCCACATGATGTACACATGT+GGG + chr4.1:42426671-42426690 MS.gene07664:CDS 45.0%
TCTTCATCTCCGTGAAACTG+TGG + chr4.1:42426872-42426891 MS.gene07664:CDS 45.0%
! AACTCAGGGTCTGAAATCTC+TGG - chr4.1:42426561-42426580 None:intergenic 45.0%
! CTCGTGGTGTTAAAATTGCG+GGG + chr4.1:42426792-42426811 MS.gene07664:CDS 45.0%
CAAGGTCCAGGAACTTGACT+TGG + chr4.1:42426713-42426732 MS.gene07664:CDS 50.0%
GGCATTAGATCTCAAGGTCC+AGG + chr4.1:42426701-42426720 MS.gene07664:CDS 50.0%
TCACACGTGGAAAGCCTAAG+CGG - chr4.1:42426768-42426787 None:intergenic 50.0%
TTCCACGTGTGAGTCACTCG+TGG + chr4.1:42426776-42426795 MS.gene07664:CDS 55.0%
! GCAGATCGACTCCCATCTTG+TGG - chr4.1:42426508-42426527 None:intergenic 55.0%
CACCACGAGTGACTCACACG+TGG - chr4.1:42426781-42426800 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 42426393 42427660 42426393 ID=MS.gene07664
chr4.1 mRNA 42426393 42427660 42426393 ID=MS.gene07664.t1;Parent=MS.gene07664
chr4.1 exon 42426393 42427280 42426393 ID=MS.gene07664.t1.exon1;Parent=MS.gene07664.t1
chr4.1 CDS 42426393 42427280 42426393 ID=cds.MS.gene07664.t1;Parent=MS.gene07664.t1
chr4.1 exon 42427598 42427660 42427598 ID=MS.gene07664.t1.exon2;Parent=MS.gene07664.t1
chr4.1 CDS 42427598 42427660 42427598 ID=cds.MS.gene07664.t1;Parent=MS.gene07664.t1
Gene Sequence

>MS.gene07664

ATGGCATGCTCTGATGAAAAACATGATCGATTAAGCAATCTCCCAGACGATTTGATTTGTCATATTCTGTCTTTCCTATCAACAAAAGAGTCTTATAGAACATGTGTTCTATCCACAAGATGGGAGTCGATCTGCACCAAGATTCCCAACCTTCACTTTCAATTACCAGAGATTTCAGACCCTGAGTTGTCCAAAGAAATCAAATTTGTGAATGTCGCTCTCCTAAGACGCACCGAAAATATAAGAAAACTAAGTCTTGATAGCAACAAAGGCTGCCAGCCACATGATGTACACATGTGGGTTTCAAAGGCATTAGATCTCAAGGTCCAGGAACTTGACTTGGATCTGTTTCTCCATGAAAAAATCTTATTGCCGCTTAGGCTTTCCACGTGTGAGTCACTCGTGGTGTTAAAATTGCGGGGCAGAATTCAACCAACACTCAATTCTTCATTTCATGTATATTTACCGTCACTAAAGATTCTTCATCTCCGTGAAACTGTGGCGTATTCTATCTTTGATGATCGTAGAGAGTATGATCTCAATAATTTTCTATCTGGTTGTCCACATCTAGAGGAACTTCTTTTAGCCGAGACCTTTGCATTACCTATCAACACCTCTTTTCACTTATTGAAGAGATTATTCCTTACTTTATATATGCCTACTTCGGTTATTAAGTGTTGTCCACTACAAATTAATGCCCCTTCACTTGAAGTTCTTTCTATTGTTGATTTTTCATTGGCTCCAAGAAAATATGACTTTACAAACTTATCCACTGTTGATGAAGCTGCTCTTTGCATTTGTAAGCGTCCGGATTTTAACAATTTGTATACACTCTTGAAAGGACTTTCTAATGTCAAAACAATGGCTCTCGGTGCTAAAACTTTTCATGTAAGTTTCATAAATATGTTTCTTTTTTAATTACAAGTTCCATATTTAGTCACCCATATGCAATTCTATTCTCATTTTATAATTTTGTTATGCAGTTTCTCAACATGGAGGACAAACTTGACAACTTACATCTCCTCACTTTTCACAATTTATTATATTTAACGATTGAAATATCTGAGAATTGCAGTTGGAATATGCTAGTCAGCTTTCTACAGAATGCTCCAAAACTTAAGGATTTTGCAATTATGGTGTGTATGATGTTCTTTTAACTATATTTGCACAATATTTTTTTTTAAAAAAAAGATGAAATATAATAGGCTCAAAAGTCTGGCACTAGAAGAGCAAAGACTTGGCGAAATATACATGGAGTTTGCAAATAA

Protein sequence

>MS.gene07664.t1

MACSDEKHDRLSNLPDDLICHILSFLSTKESYRTCVLSTRWESICTKIPNLHFQLPEISDPELSKEIKFVNVALLRRTENIRKLSLDSNKGCQPHDVHMWVSKALDLKVQELDLDLFLHEKILLPLRLSTCESLVVLKLRGRIQPTLNSSFHVYLPSLKILHLRETVAYSIFDDRREYDLNNFLSGCPHLEELLLAETFALPINTSFHLLKRLFLTLYMPTSVIKCCPLQINAPSLEVLSIVDFSLAPRKYDFTNLSTVDEAALCICKRPDFNNLYTLLKGLSNVKTMALGAKTFHAQKSGTRRAKTWRNIHGVCK