AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene054411


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054411.t1 MTR_4g056040 69.181 464 105 4 165 590 5 468 0.0 595
MS.gene054411.t1 MTR_4g056020 69.495 436 125 2 161 588 1 436 0.0 583
MS.gene054411.t1 MTR_4g056030 69.213 432 125 3 165 588 5 436 0.0 571
MS.gene054411.t1 MTR_4g055990 64.792 480 119 4 161 590 1 480 0.0 561
MS.gene054411.t1 MTR_4g055990 64.854 478 118 4 161 588 1 478 0.0 561
MS.gene054411.t1 MTR_1g038710 68.421 456 121 7 150 588 1 450 0.0 560
MS.gene054411.t1 MTR_4g055580 61.133 512 145 5 130 588 53 563 0.0 555
MS.gene054411.t1 MTR_4g056070 65.596 436 103 2 161 549 1 436 0.0 536
MS.gene054411.t1 MTR_1g090883 62.707 362 119 6 150 500 1 357 9.80e-137 403
MS.gene054411.t1 MTR_7g110920 57.703 357 92 5 252 587 1 319 4.51e-118 353
MS.gene054411.t1 MTR_4g093690 59.480 269 97 6 160 419 9 274 4.42e-87 271
MS.gene054411.t1 MTR_1g090900 66.474 173 50 2 165 329 7 179 5.73e-64 209
MS.gene054411.t1 MTR_4g056020 70.504 139 40 1 451 588 2 140 1.45e-60 198
MS.gene054411.t1 MTR_4g056010 77.551 98 22 0 223 320 3 100 7.01e-42 146
MS.gene054411.t1 MTR_1g090890 66.667 87 27 1 504 590 33 117 4.55e-30 114
MS.gene054411.t1 MTR_5g084070 30.806 422 244 14 165 569 9 399 6.90e-30 122
MS.gene054411.t1 MTR_8g445780 31.514 403 228 16 169 549 13 389 1.51e-28 118
MS.gene054411.t1 MTR_5g080710 29.120 443 264 14 146 565 6 421 2.37e-27 115
MS.gene054411.t1 MTR_3g107100 29.117 419 215 14 165 567 7 359 2.43e-26 112
MS.gene054411.t1 MTR_3g108560 30.120 415 205 20 163 564 14 356 1.89e-25 108
MS.gene054411.t1 MTR_7g056433 28.434 415 216 17 165 564 8 356 2.09e-23 102
MS.gene054411.t1 MTR_1g041245 27.805 410 216 14 169 564 11 354 3.57e-22 99.4
MS.gene054411.t1 MTR_2g007450 25.268 467 258 17 155 585 2 413 1.15e-21 98.2
MS.gene054411.t1 MTR_2g007500 29.306 389 192 15 169 541 14 335 2.02e-21 96.3
MS.gene054411.t1 MTR_1g053025 25.942 451 240 14 169 590 2 387 3.62e-21 96.3
MS.gene054411.t1 MTR_7g115270 27.857 420 217 16 169 564 12 369 1.68e-20 94.4
MS.gene054411.t1 MTR_4g032730 27.233 459 248 17 162 564 8 436 1.09e-19 92.8
MS.gene054411.t1 MTR_3g048290 27.816 435 258 15 165 564 19 432 1.29e-19 92.4
MS.gene054411.t1 MTR_2g007400 25.163 461 233 19 169 589 12 400 5.23e-19 90.1
MS.gene054411.t1 MTR_8g062270 29.330 433 245 20 169 564 16 424 2.45e-18 88.6
MS.gene054411.t1 MTR_3g107120 27.523 436 212 15 161 564 1 364 3.32e-18 87.4
MS.gene054411.t1 MTR_7g033915 25.653 421 218 13 169 578 11 347 6.45e-18 86.3
MS.gene054411.t1 MTR_3g082890 25.391 512 294 18 81 564 3 454 2.65e-17 85.5
MS.gene054411.t1 MTR_8g014260 27.442 430 261 15 166 566 13 420 3.06e-17 85.1
MS.gene054411.t1 MTR_4g039440 27.924 419 217 18 163 564 26 376 3.61e-17 84.3
MS.gene054411.t1 MTR_0492s0020 35.204 196 98 8 169 352 86 264 1.52e-16 82.8
MS.gene054411.t1 MTR_0543s0010 35.204 196 98 8 169 352 86 264 1.87e-16 82.4
MS.gene054411.t1 MTR_3g107160 26.619 417 223 13 165 564 6 356 2.82e-16 81.6
MS.gene054411.t1 MTR_5g045170 33.168 202 87 8 171 346 16 195 3.01e-16 81.6
MS.gene054411.t1 MTR_8g058970 27.333 450 255 18 165 564 15 442 3.94e-16 81.6
MS.gene054411.t1 MTR_3g108560 29.545 352 167 18 163 501 14 297 7.75e-16 79.3
MS.gene054411.t1 MTR_8g468840 27.650 434 251 17 168 564 13 420 1.07e-15 80.1
MS.gene054411.t1 MTR_2g083840 28.868 433 240 18 169 564 21 422 2.22e-15 79.3
MS.gene054411.t1 MTR_1g085120 25.116 430 229 16 169 576 167 525 2.69e-15 79.3
MS.gene054411.t1 MTR_8g058965 26.106 452 270 15 150 565 1 424 2.79e-15 79.0
MS.gene054411.t1 MTR_1g085120 25.116 430 229 16 169 576 92 450 3.23e-15 79.0
MS.gene054411.t1 MTR_2g008320 25.227 440 245 15 169 590 52 425 3.68e-15 78.6
MS.gene054411.t1 MTR_5g039950 27.229 415 233 16 169 564 23 387 5.99e-15 77.8
MS.gene054411.t1 MTR_7g026500 25.701 428 211 16 168 564 13 364 6.79e-15 77.4
MS.gene054411.t1 MTR_8g014160 27.546 432 213 17 162 564 33 393 7.36e-15 77.4
MS.gene054411.t1 MTR_5g058100 25.986 431 216 15 155 564 2 350 9.53e-15 76.6
MS.gene054411.t1 MTR_2g036470 26.168 428 226 18 169 574 14 373 9.83e-15 76.6
MS.gene054411.t1 MTR_4g050930 26.829 328 211 9 166 475 26 342 1.07e-14 76.6
MS.gene054411.t1 MTR_7g033990 24.000 425 238 14 169 578 11 365 1.09e-14 77.0
MS.gene054411.t1 MTR_8g468810 27.700 426 256 18 169 564 25 428 2.18e-14 76.3
MS.gene054411.t1 MTR_5g073340 23.656 372 204 10 169 536 8 303 2.33e-14 74.7
MS.gene054411.t1 MTR_4g050930 26.911 327 210 9 167 475 27 342 2.75e-14 75.9
MS.gene054411.t1 MTR_3g023270 28.875 329 194 13 165 473 8 316 3.55e-14 74.7
MS.gene054411.t1 MTR_8g467800 28.846 416 250 16 165 553 16 412 3.98e-14 75.5
MS.gene054411.t1 MTR_7g007080 32.569 218 106 10 167 359 2 203 4.40e-14 74.7
MS.gene054411.t1 MTR_6g011460 26.777 422 201 16 169 564 46 385 5.13e-14 74.7
MS.gene054411.t1 MTR_6g022360 35.106 188 105 6 169 352 43 217 5.80e-14 74.3
MS.gene054411.t1 MTR_7g098570 34.759 187 106 5 169 346 20 199 9.43e-14 74.3
MS.gene054411.t1 MTR_4g045900 25.532 470 275 15 169 571 26 487 1.01e-13 74.3
MS.gene054411.t1 MTR_5g045510 32.984 191 104 9 169 346 12 191 1.06e-13 73.6
MS.gene054411.t1 MTR_7g055943 26.464 427 205 20 169 564 40 388 1.68e-13 73.2
MS.gene054411.t1 MTR_4g080787 26.697 442 249 20 169 564 19 431 1.69e-13 73.6
MS.gene054411.t1 MTR_7g056447 33.333 189 109 5 169 348 9 189 4.63e-13 70.5
MS.gene054411.t1 MTR_1g108820 25.424 413 223 16 169 564 8 352 5.25e-13 71.2
MS.gene054411.t1 MTR_3g082890 26.682 431 251 17 166 564 14 411 6.35e-13 71.6
MS.gene054411.t1 MTR_4g092430 25.714 385 251 12 148 510 22 393 6.81e-13 71.6
MS.gene054411.t1 MTR_8g062310 31.884 207 121 8 169 366 25 220 7.09e-13 71.2
MS.gene054411.t1 MTR_1g048340 26.748 329 202 10 162 481 9 307 7.39e-13 70.1
MS.gene054411.t1 MTR_7g032380 29.167 216 128 5 169 370 11 215 8.43e-13 70.5
MS.gene054411.t1 MTR_8g469020 26.711 453 236 21 169 565 7 419 1.01e-12 70.9
MS.gene054411.t1 MTR_7g098510 34.759 187 106 6 169 346 18 197 1.38e-12 70.1
MS.gene054411.t1 MTR_6g022500 26.027 438 228 19 164 578 93 457 1.61e-12 70.5
MS.gene054411.t1 MTR_7g023310 23.364 428 276 15 166 564 23 427 1.84e-12 70.1
MS.gene054411.t1 MTR_7g110910 64.151 53 18 1 150 202 148 199 1.98e-12 67.0
MS.gene054411.t1 MTR_1g085120 31.658 199 110 8 169 352 179 366 2.26e-12 69.7
MS.gene054411.t1 MTR_7g034115 33.673 196 97 9 169 346 11 191 2.56e-12 69.3
MS.gene054411.t1 MTR_8g085430 27.796 313 175 13 169 450 11 303 3.25e-12 68.6
MS.gene054411.t1 MTR_3g087260 26.984 441 249 15 169 564 12 424 3.41e-12 69.3
MS.gene054411.t1 MTR_4g080590 25.952 420 266 18 169 565 23 420 3.81e-12 68.9
MS.gene054411.t1 MTR_3g036250 33.333 192 111 6 166 346 2 187 6.29e-12 67.8
MS.gene054411.t1 MTR_3g108150 33.155 187 105 7 169 346 13 188 8.91e-12 67.4
MS.gene054411.t1 MTR_5g008950 35.514 107 62 3 464 566 233 336 1.08e-11 67.4
MS.gene054411.t1 MTR_3g463830 29.885 174 110 3 155 316 49 222 1.36e-11 66.6
MS.gene054411.t1 MTR_7g033945 35.119 168 82 8 169 316 11 171 1.64e-11 63.9
MS.gene054411.t1 MTR_3g099900 27.356 329 206 12 166 474 15 330 2.38e-11 66.2
MS.gene054411.t1 MTR_4g080773 26.424 439 257 16 169 564 19 434 2.52e-11 66.6
MS.gene054411.t1 MTR_4g080773 25.968 439 259 15 169 564 19 434 2.53e-11 66.6
MS.gene054411.t1 MTR_8g066650 25.595 336 215 14 163 477 74 395 6.62e-11 65.1
MS.gene054411.t1 MTR_6g088700 26.954 371 231 14 165 510 10 365 7.15e-11 64.7
MS.gene054411.t1 MTR_4g050250 33.624 229 105 10 151 346 12 226 8.12e-11 64.7
MS.gene054411.t1 MTR_4g047950 34.132 167 91 6 165 316 9 171 8.41e-11 64.7
MS.gene054411.t1 MTR_1g108820 31.818 198 112 7 169 355 8 193 8.62e-11 64.3
MS.gene054411.t1 MTR_8g468810 29.677 310 174 14 169 451 25 317 8.95e-11 63.9
MS.gene054411.t1 MTR_4g080590 28.249 354 215 16 169 499 23 360 9.13e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054411.t1 AT4G00315 30.505 436 244 19 169 569 2 413 5.49e-30 123
MS.gene054411.t1 AT1G55660 29.817 436 247 19 169 569 53 464 2.91e-28 119
MS.gene054411.t1 AT4G26340 28.505 428 253 18 169 575 2 397 6.28e-28 117
MS.gene054411.t1 AT3G59230 29.325 474 249 20 169 583 12 458 1.96e-26 113
MS.gene054411.t1 AT4G14103 29.659 381 204 12 169 509 8 364 3.10e-26 111
MS.gene054411.t1 AT4G14103 29.659 381 204 12 169 509 8 364 3.10e-26 111
MS.gene054411.t1 AT5G62970 29.655 435 247 19 169 564 2 416 1.59e-25 110
MS.gene054411.t1 AT3G59190 27.660 376 211 10 169 500 12 370 5.16e-25 107
MS.gene054411.t1 AT3G59190 28.000 375 211 10 169 500 12 370 5.54e-25 109
MS.gene054411.t1 AT4G14103 29.491 373 199 12 168 500 7 355 7.13e-25 108
MS.gene054411.t1 AT4G10400 26.794 418 243 13 169 564 2 378 1.51e-24 106
MS.gene054411.t1 AT4G10400 26.794 418 243 13 169 564 2 378 1.51e-24 106
MS.gene054411.t1 AT4G10400 26.794 418 243 13 169 564 2 378 1.51e-24 106
MS.gene054411.t1 AT4G13960 27.191 445 254 13 169 569 2 420 3.12e-24 106
MS.gene054411.t1 AT4G13960 27.191 445 254 13 169 569 2 420 3.12e-24 106
MS.gene054411.t1 AT1G06630 31.579 361 200 13 168 500 11 352 7.53e-24 103
MS.gene054411.t1 AT1G06630 31.579 361 200 13 168 500 11 352 7.53e-24 103
MS.gene054411.t1 AT1G06630 31.579 361 200 13 168 500 11 352 7.86e-24 104
MS.gene054411.t1 AT1G06630 31.579 361 200 13 168 500 11 352 7.86e-24 104
MS.gene054411.t1 AT1G06630 31.579 361 200 13 168 500 11 352 7.86e-24 104
MS.gene054411.t1 AT1G06630 31.579 361 200 13 168 500 11 352 7.86e-24 104
MS.gene054411.t1 AT1G06630 31.579 361 200 13 168 500 20 361 9.12e-24 104
MS.gene054411.t1 AT1G06630 31.579 361 200 13 168 500 11 352 1.01e-23 105
MS.gene054411.t1 AT2G26860 29.904 418 248 16 169 564 2 396 1.58e-23 103
MS.gene054411.t1 AT2G26860 29.904 418 248 16 169 564 2 396 1.58e-23 103
MS.gene054411.t1 AT2G42720 31.720 372 188 16 169 500 2 347 2.45e-23 103
MS.gene054411.t1 AT5G38590 26.573 429 266 13 169 579 2 399 4.85e-23 102
MS.gene054411.t1 AT3G59250 28.401 419 227 17 169 565 7 374 8.73e-23 101
MS.gene054411.t1 AT5G56440 28.736 435 252 17 169 572 2 409 1.09e-22 101
MS.gene054411.t1 AT5G56380 28.066 424 241 14 169 556 2 397 1.28e-22 101
MS.gene054411.t1 AT5G56380 28.066 424 241 14 169 556 2 397 1.28e-22 101
MS.gene054411.t1 AT5G56400 27.578 446 265 17 144 564 8 420 2.80e-22 100
MS.gene054411.t1 AT1G58310 27.083 480 252 18 164 573 3 454 2.87e-22 100
MS.gene054411.t1 AT5G60610 29.854 412 238 19 169 560 2 382 3.12e-22 99.4
MS.gene054411.t1 AT5G60610 29.854 412 238 19 169 560 2 382 3.12e-22 99.4
MS.gene054411.t1 AT3G62430 31.073 354 209 13 169 500 2 342 1.06e-21 98.6
MS.gene054411.t1 AT4G14096 27.704 379 209 11 168 509 7 357 1.33e-21 98.6
MS.gene054411.t1 AT4G14096 27.704 379 209 11 168 509 7 357 1.33e-21 98.6
MS.gene054411.t1 AT3G59160 27.251 411 215 15 169 513 13 405 2.35e-21 97.8
MS.gene054411.t1 AT4G26350 25.467 428 275 15 169 575 2 406 4.60e-21 96.7
MS.gene054411.t1 AT5G38396 29.474 380 197 14 169 500 2 358 5.01e-21 96.7
MS.gene054411.t1 AT2G26030 26.577 444 254 18 169 569 4 418 5.58e-21 96.7
MS.gene054411.t1 AT2G26030 26.351 444 250 18 169 569 4 413 8.30e-21 95.9
MS.gene054411.t1 AT2G26030 26.351 444 250 18 169 569 4 413 8.30e-21 95.9
MS.gene054411.t1 AT3G59000 27.394 449 251 14 169 566 2 426 8.56e-21 96.3
MS.gene054411.t1 AT1G55660 34.008 247 132 12 169 396 53 287 2.04e-20 93.6
MS.gene054411.t1 AT1G32375 28.571 420 245 19 169 564 2 390 2.06e-20 94.4
MS.gene054411.t1 AT1G32375 28.571 420 245 19 169 564 2 390 2.06e-20 94.4
MS.gene054411.t1 AT1G16930 28.713 404 233 16 156 531 2 378 2.39e-20 94.7
MS.gene054411.t1 AT1G16930 28.713 404 233 16 156 531 2 378 2.39e-20 94.7
MS.gene054411.t1 AT1G16930 28.713 404 233 16 156 531 2 378 2.39e-20 94.7
MS.gene054411.t1 AT1G52650 25.113 442 258 14 169 564 2 416 2.65e-20 94.7
MS.gene054411.t1 AT3G59200 27.143 420 220 15 168 532 6 394 2.93e-20 94.7
MS.gene054411.t1 AT3G50710 26.291 426 242 12 169 560 2 389 4.03e-20 93.6
MS.gene054411.t1 AT1G13780 26.591 440 248 17 169 562 10 420 5.09e-20 93.6
MS.gene054411.t1 AT1G51370 27.594 424 245 14 167 564 17 404 5.69e-20 93.2
MS.gene054411.t1 AT2G29930 28.767 365 209 13 169 505 12 353 1.19e-19 92.4
MS.gene054411.t1 AT2G29930 28.767 365 209 13 169 505 12 353 1.19e-19 92.4
MS.gene054411.t1 AT3G62440 29.337 392 213 17 169 514 2 375 1.46e-19 92.4
MS.gene054411.t1 AT1G66300 27.974 454 261 19 167 585 27 449 2.02e-19 91.7
MS.gene054411.t1 AT3G52680 28.571 427 240 17 168 566 20 409 2.53e-19 91.7
MS.gene054411.t1 AT5G38390 27.191 445 251 18 169 570 2 416 3.20e-19 91.3
MS.gene054411.t1 AT4G00160 29.551 423 241 17 169 566 16 406 3.26e-19 91.3
MS.gene054411.t1 AT3G59210 28.796 382 219 12 165 509 3 368 3.53e-19 91.3
MS.gene054411.t1 AT3G59210 28.796 382 219 12 165 509 3 368 3.53e-19 91.3
MS.gene054411.t1 AT3G59210 28.796 382 219 12 165 509 3 368 3.53e-19 91.3
MS.gene054411.t1 AT3G59210 28.796 382 219 12 165 509 3 368 3.53e-19 91.3
MS.gene054411.t1 AT3G59210 28.796 382 219 12 165 509 3 368 3.53e-19 91.3
MS.gene054411.t1 AT4G22280 31.405 363 215 12 169 515 2 346 4.49e-19 90.5
MS.gene054411.t1 AT1G69630 27.609 460 272 19 154 579 2 434 6.15e-19 90.1
MS.gene054411.t1 AT3G26930 28.467 411 249 15 169 562 21 403 6.32e-19 90.1
MS.gene054411.t1 AT5G44490 28.571 448 255 19 154 564 2 421 1.05e-18 89.7
MS.gene054411.t1 AT1G05080 29.426 418 253 14 168 564 12 408 1.18e-18 89.4
MS.gene054411.t1 AT5G41830 27.612 402 218 13 164 514 8 387 1.23e-18 89.7
MS.gene054411.t1 AT5G44490 28.571 448 255 19 154 564 2 421 1.26e-18 89.4
MS.gene054411.t1 AT5G44950 27.160 405 230 15 168 537 3 377 1.56e-18 89.0
MS.gene054411.t1 AT3G03030 26.790 377 216 11 169 500 2 363 2.26e-18 88.6
MS.gene054411.t1 AT1G78760 26.696 457 247 19 167 579 14 426 2.61e-18 88.2
MS.gene054411.t1 AT3G59200 27.720 386 199 14 168 500 6 364 2.72e-18 87.4
MS.gene054411.t1 AT3G58960 28.686 373 219 13 169 508 2 360 3.48e-18 88.2
MS.gene054411.t1 AT5G56420 25.416 421 276 13 168 575 5 400 3.88e-18 87.4
MS.gene054411.t1 AT5G56420 25.416 421 276 13 168 575 5 400 3.88e-18 87.4
MS.gene054411.t1 AT5G56420 25.416 421 276 13 168 575 5 400 3.88e-18 87.4
MS.gene054411.t1 AT3G58880 28.457 376 205 13 169 503 3 355 4.41e-18 87.8
MS.gene054411.t1 AT5G56370 27.660 423 254 15 169 574 2 389 4.66e-18 87.4
MS.gene054411.t1 AT5G56370 27.660 423 254 15 169 574 2 389 4.66e-18 87.4
MS.gene054411.t1 AT5G53840 29.078 423 253 16 162 564 11 406 5.38e-18 87.4
MS.gene054411.t1 AT3G59170 27.251 422 214 15 169 518 7 407 8.73e-18 87.0
MS.gene054411.t1 AT3G58920 26.455 378 225 10 169 503 2 369 1.05e-17 86.7
MS.gene054411.t1 AT1G51370 28.283 396 223 13 167 537 17 376 1.07e-17 86.3
MS.gene054411.t1 AT3G26930 27.604 384 233 15 196 562 3 358 1.75e-17 85.5
MS.gene054411.t1 AT4G22280 31.897 348 203 12 169 500 2 331 1.90e-17 84.3
MS.gene054411.t1 AT3G49030 26.698 427 249 17 167 566 19 408 2.08e-17 85.5
MS.gene054411.t1 AT3G58900 27.295 414 242 11 169 538 2 400 5.52e-17 84.3
MS.gene054411.t1 AT5G41840 25.693 397 223 12 169 509 14 394 5.58e-17 84.7
MS.gene054411.t1 AT5G22670 27.251 422 255 17 168 561 10 407 5.62e-17 84.3
MS.gene054411.t1 AT1G66290 27.231 437 246 20 162 564 23 421 9.89e-17 83.6
MS.gene054411.t1 AT3G58860 26.374 364 210 11 166 497 4 341 1.16e-16 83.2
MS.gene054411.t1 AT4G10420 28.125 320 194 11 252 564 1 291 1.24e-16 81.6
MS.gene054411.t1 AT3G03040 26.810 373 216 9 169 500 2 358 1.59e-16 82.8
MS.gene054411.t1 AT4G00320 26.440 382 220 11 164 500 8 373 1.66e-16 83.2
MS.gene054411.t1 AT3G59240 25.629 437 274 13 169 573 8 425 2.17e-16 82.8
MS.gene054411.t1 AT1G51370 32.661 248 127 8 167 399 17 239 2.55e-16 81.3
MS.gene054411.t1 AT5G56560 26.555 418 249 16 166 560 2 384 2.91e-16 81.6
MS.gene054411.t1 AT3G56780 25.111 450 264 16 171 565 9 440 4.86e-16 81.6
MS.gene054411.t1 AT3G58980 27.200 375 229 13 169 511 2 364 5.20e-16 82.0
MS.gene054411.t1 AT2G04230 27.602 442 262 15 169 583 13 423 5.96e-16 80.9
MS.gene054411.t1 AT1G78750 25.532 470 281 18 150 579 1 441 8.02e-16 80.9
MS.gene054411.t1 AT1G78750 25.532 470 281 18 150 579 1 441 8.02e-16 80.9
MS.gene054411.t1 AT1G80470 24.641 418 272 16 167 562 13 409 8.39e-16 80.5
MS.gene054411.t1 AT1G55030 27.073 410 252 17 169 562 19 397 9.04e-16 80.5
MS.gene054411.t1 AT4G13985 27.110 391 243 12 152 512 2 380 9.21e-16 80.5
MS.gene054411.t1 AT5G56700 31.339 351 202 18 228 566 29 352 1.30e-15 79.3
MS.gene054411.t1 AT1G55030 27.073 410 252 17 169 562 9 387 1.32e-15 79.7
MS.gene054411.t1 AT5G53635 29.323 399 231 18 171 538 2 380 1.64e-15 79.3
MS.gene054411.t1 AT4G15060 27.749 382 214 19 152 500 10 362 1.81e-15 79.3
MS.gene054411.t1 AT1G66310 26.720 378 222 15 154 499 2 356 2.52e-15 79.0
MS.gene054411.t1 AT2G42730 26.810 373 202 16 169 497 5 350 3.99e-15 78.6
MS.gene054411.t1 AT5G18780 25.117 426 257 14 169 562 11 406 4.21e-15 78.2
MS.gene054411.t1 AT5G18780 25.117 426 257 14 169 562 11 406 4.21e-15 78.2
MS.gene054411.t1 AT2G29910 28.814 354 189 16 164 474 24 357 5.45e-15 77.4
MS.gene054411.t1 AT2G29910 28.857 350 186 16 168 474 4 333 9.87e-15 76.3
MS.gene054411.t1 AT2G29910 28.857 350 186 16 168 474 4 333 9.87e-15 76.3
MS.gene054411.t1 AT2G29910 28.857 350 186 16 168 474 4 333 9.87e-15 76.3
MS.gene054411.t1 AT2G29910 28.857 350 186 16 168 474 4 333 9.87e-15 76.3
MS.gene054411.t1 AT4G13960 26.359 368 218 11 229 569 10 351 1.04e-14 76.6
MS.gene054411.t1 AT4G13960 26.359 368 218 11 229 569 10 351 1.04e-14 76.6
MS.gene054411.t1 AT5G22730 24.706 425 269 12 169 562 28 432 1.17e-14 77.0
MS.gene054411.t1 AT5G22730 24.706 425 269 12 169 562 28 432 1.17e-14 77.0
MS.gene054411.t1 AT3G42770 29.412 357 178 15 174 488 4 328 1.20e-14 77.4
MS.gene054411.t1 AT5G22660 25.390 449 283 17 169 586 13 440 1.88e-14 76.3
MS.gene054411.t1 AT5G18770 26.291 426 259 15 169 562 24 426 2.91e-14 75.9
MS.gene054411.t1 AT3G58940 25.627 359 218 10 169 500 2 338 3.21e-14 76.3
MS.gene054411.t1 AT3G58940 25.627 359 218 10 169 500 2 338 3.21e-14 76.3
MS.gene054411.t1 AT5G22700 28.000 400 219 18 169 531 6 373 3.47e-14 75.5
MS.gene054411.t1 AT5G22700 28.000 400 219 18 169 531 6 373 3.47e-14 75.5
MS.gene054411.t1 AT5G22700 28.000 400 219 18 169 531 6 373 3.47e-14 75.5
MS.gene054411.t1 AT5G22700 28.000 400 219 18 169 531 6 373 3.47e-14 75.5
MS.gene054411.t1 AT5G56820 25.121 414 252 15 169 564 15 388 5.36e-14 74.7
MS.gene054411.t1 AT5G22700 27.483 433 233 21 169 561 43 434 7.58e-14 74.7
MS.gene054411.t1 AT1G66320 24.842 475 275 18 151 585 18 450 7.86e-14 74.3
MS.gene054411.t1 AT5G15620 28.354 395 245 13 169 538 2 383 9.25e-14 74.3
MS.gene054411.t1 AT3G54910 28.571 336 208 12 232 564 36 342 1.12e-13 73.6
MS.gene054411.t1 AT3G54910 28.571 336 208 12 232 564 36 342 1.12e-13 73.6
MS.gene054411.t1 AT3G54910 28.571 336 208 12 232 564 36 342 1.12e-13 73.6
MS.gene054411.t1 AT5G56810 26.824 425 245 15 169 564 15 402 1.45e-13 73.6
MS.gene054411.t1 AT3G03030 27.217 327 182 10 169 450 2 317 1.69e-13 72.4
MS.gene054411.t1 AT5G38590 27.759 299 173 11 169 447 2 277 1.80e-13 71.6
MS.gene054411.t1 AT3G44060 28.499 393 228 21 174 538 4 371 2.11e-13 72.8
MS.gene054411.t1 AT1G48400 24.566 403 224 11 168 509 9 392 2.21e-13 73.2
MS.gene054411.t1 AT3G44810 28.889 360 211 14 171 500 9 353 2.82e-13 72.8
MS.gene054411.t1 AT3G52680 29.609 358 189 15 169 499 21 342 3.13e-13 72.0
MS.gene054411.t1 AT4G09920 27.124 306 173 9 169 449 2 282 3.59e-13 71.2
MS.gene054411.t1 AT4G09920 27.124 306 173 9 169 449 2 282 3.59e-13 71.2
MS.gene054411.t1 AT2G29930 32.444 225 121 9 294 505 27 233 4.30e-13 71.2
MS.gene054411.t1 AT5G44970 25.659 417 223 15 167 563 2 351 5.26e-13 71.6
MS.gene054411.t1 AT4G15060 27.811 338 184 15 166 465 169 484 5.30e-13 72.0
MS.gene054411.t1 AT1G21990 28.424 387 207 17 169 509 9 371 8.63e-13 71.2
MS.gene054411.t1 AT3G59180 26.289 388 222 14 228 573 48 413 9.14e-13 71.2
MS.gene054411.t1 AT3G58900 27.554 323 184 8 169 451 2 314 9.73e-13 70.1
MS.gene054411.t1 AT1G22000 26.790 433 255 19 162 564 22 422 1.33e-12 70.5
MS.gene054411.t1 AT5G35995 27.034 381 217 18 168 515 4 356 2.07e-12 70.1
MS.gene054411.t1 AT5G35995 27.034 381 217 18 168 515 4 356 2.07e-12 70.1
MS.gene054411.t1 AT5G38392 34.483 203 110 6 169 352 2 200 2.25e-12 67.0
MS.gene054411.t1 AT3G49150 23.491 464 301 17 167 589 14 464 2.80e-12 69.7
MS.gene054411.t1 AT3G58900 27.385 325 180 8 169 450 2 313 2.85e-12 68.6
MS.gene054411.t1 AT3G58900 27.385 325 180 8 169 450 2 313 2.85e-12 68.6
MS.gene054411.t1 AT3G26922 31.429 245 142 12 169 399 14 246 3.62e-12 68.2
MS.gene054411.t1 AT3G26922 31.429 245 142 12 169 399 14 246 3.62e-12 68.2
MS.gene054411.t1 AT4G09920 26.974 304 172 9 169 447 2 280 3.66e-12 67.8
MS.gene054411.t1 AT4G09920 26.974 304 172 9 169 447 2 280 3.66e-12 67.8
MS.gene054411.t1 AT4G09920 26.974 304 172 9 169 447 2 280 3.66e-12 67.8
MS.gene054411.t1 AT5G22610 26.545 437 255 17 169 562 18 431 4.18e-12 69.3
MS.gene054411.t1 AT4G03220 24.390 451 276 14 169 564 24 464 4.93e-12 68.9
MS.gene054411.t1 AT5G18780 24.586 362 217 10 169 499 11 347 5.85e-12 68.2
MS.gene054411.t1 AT5G18780 24.586 362 217 10 169 499 11 347 5.85e-12 68.2
MS.gene054411.t1 AT2G29910 30.712 267 152 13 168 417 4 254 5.94e-12 67.8
MS.gene054411.t1 AT2G29910 30.712 267 152 13 168 417 4 254 5.94e-12 67.8
MS.gene054411.t1 AT3G56780 24.823 423 245 16 171 538 9 413 6.92e-12 68.2
MS.gene054411.t1 AT5G22610 26.714 423 242 17 169 562 18 401 8.68e-12 68.2
MS.gene054411.t1 AT5G18770 26.816 358 212 13 169 495 24 362 1.05e-11 67.4
MS.gene054411.t1 AT2G26030 25.496 353 194 15 253 569 21 340 3.07e-11 65.9
MS.gene054411.t1 AT5G22730 27.007 274 165 8 169 418 28 290 4.14e-11 65.5
MS.gene054411.t1 AT1G16940 26.801 347 212 15 168 499 10 329 4.24e-11 65.9
MS.gene054411.t1 AT3G58930 25.549 364 209 13 169 500 2 335 6.18e-11 65.5
MS.gene054411.t1 AT3G58930 25.549 364 209 13 169 500 2 335 6.18e-11 65.5

Find 107 sgRNAs with CRISPR-Local

Find 144 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCATTACATTTGAATTTAA+AGG 0.124626 7.4:+4348408 MS.gene054411:CDS
GTTTACAACCTCATATATTA+TGG 0.172229 7.4:-4347763 None:intergenic
TATTGCCGCTTAGGCTTTCT+AGG 0.227353 7.4:+4347388 MS.gene054411:CDS
TCACAATTTATTATCTTTAT+CGG 0.257922 7.4:+4348053 MS.gene054411:CDS
ATGGCAAGATCCTTAAGTTT+TGG 0.281670 7.4:-4348132 None:intergenic
TTCTACTACTTTCTCTGAAT+CGG 0.286108 7.4:-4348517 None:intergenic
CATCCGAGAGATTGCTTAAT+CGG 0.321375 7.4:-4346627 None:intergenic
CTATAGGCATGAATAAATAA+AGG 0.338690 7.4:-4347662 None:intergenic
TTCCATGGAGCAACAATTCC+AGG 0.342388 7.4:-4347359 None:intergenic
CGTCCGAGAGATTGCTTAAT+CGG 0.359389 7.4:-4346759 None:intergenic
CGTCTGAGAGGTTGCTTAAT+CGG 0.364741 7.4:-4347068 None:intergenic
CGTCCGAGAGATCGCTTAAT+CGG 0.370383 7.4:-4346966 None:intergenic
CGTCCGAGAGATTGCTTAAT+CGG 0.375246 7.4:-4346729 None:intergenic
TCTATCCGGTTGTCCACATC+TGG 0.385568 7.4:+4347569 MS.gene054411:CDS
AGAAAGCCTAAGCGGCAATA+AGG 0.385894 7.4:-4347385 None:intergenic
ACTTGTGGTCTTGAAGTTGC+GGG 0.396664 7.4:+4347419 MS.gene054411:CDS
TAAGACGCACCGAAAATATC+AGG 0.397351 7.4:+4347244 MS.gene054411:CDS
TCTACTACTTTCTCTGAATC+GGG 0.403758 7.4:-4348516 None:intergenic
TAAGAGAAAGGAGATATTGA+TGG 0.410077 7.4:-4347625 None:intergenic
GGTAATTCAAAGTGAAGGTC+AGG 0.410851 7.4:-4347186 None:intergenic
AAGAGTAGCTTCATCAAGAT+TGG 0.412017 7.4:-4347790 None:intergenic
ACAATTCCAGGTCAAGTTCC+TGG 0.413747 7.4:-4347347 None:intergenic
ACCCACATGTGTACATCTTC+TGG 0.416507 7.4:-4347300 None:intergenic
ACATAATACTCCAAAACTTA+AGG 0.417295 7.4:+4348122 MS.gene054411:CDS
AAAGTGAAGGTCAGGGATCT+TGG 0.422327 7.4:-4347178 None:intergenic
TTTACAACCTCATATATTAT+GGG 0.427764 7.4:-4347762 None:intergenic
ACAGATTGGTATGGAATCTC+TGG 0.431531 7.4:-4347207 None:intergenic
CATACTCCAACTGCAATTCT+CGG 0.432105 7.4:-4348085 None:intergenic
ATCTTCGCCCATAATATATG+AGG 0.437696 7.4:+4347755 MS.gene054411:CDS
AATGTCAAATCATTGACTCT+TGG 0.439784 7.4:+4347870 MS.gene054411:CDS
GTTGGAAACTCGAGTTGGGT+GGG 0.456767 7.4:+4348351 MS.gene054411:CDS
TTCCTCCAGATGTGGACAAC+CGG 0.460395 7.4:-4347574 None:intergenic
CACTTGTGGTCTTGAAGTTG+CGG 0.461529 7.4:+4347418 MS.gene054411:CDS
ACTTAAGGATCTTGCCATTG+AGG 0.465062 7.4:+4348137 MS.gene054411:CDS
AAATTCAAATGTAATGAGAC+TGG 0.466724 7.4:-4348403 None:intergenic
GTCAGGGATCTTGGTGCAGA+TGG 0.469848 7.4:-4347169 None:intergenic
TATAGGCATGAATAAATAAA+GGG 0.474257 7.4:-4347661 None:intergenic
TTCATATATATCAAGGATTG+AGG 0.474301 7.4:+4346552 MS.gene054411:intron
TGAAAGACATGTCGGAGTTA+CGG 0.477178 7.4:-4348379 None:intergenic
TCAAAAGAAGAACTGAATCC+TGG 0.483175 7.4:-4347453 None:intergenic
CCAATGTGAGATGCAACTAT+AGG 0.493695 7.4:-4347678 None:intergenic
TAATCTCTTTAATAAGAGAA+AGG 0.493855 7.4:-4347637 None:intergenic
CAAGGTCCAGGAACTTGACC+TGG 0.494419 7.4:+4347341 MS.gene054411:CDS
GATCTCGATAAATTTCTATC+CGG 0.494922 7.4:+4347555 MS.gene054411:CDS
GGCATTAGATCTCAAGGTCC+AGG 0.496808 7.4:+4347329 MS.gene054411:CDS
GAAATCCTCGGTACTAGTAT+TGG 0.498768 7.4:+4348563 MS.gene054411:CDS
ATCAGCATGGAGGACAAACT+TGG 0.502251 7.4:+4348009 MS.gene054411:CDS
TAGAAAGAACTTCAAGTGAC+GGG 0.502699 7.4:-4347719 None:intergenic
TTCTAGGTGTGAGTCACTTG+TGG 0.504741 7.4:+4347404 MS.gene054411:CDS
GGAGGTTGGAAACTCGAGTT+GGG 0.509671 7.4:+4348347 MS.gene054411:CDS
TGTACACATGTGGGTTTCAA+AGG 0.516400 7.4:+4347308 MS.gene054411:CDS
GAAGAGCAGCATATACAGAT+TGG 0.520233 7.4:-4347221 None:intergenic
AGTAGAAAGAAGTTTACTCA+AGG 0.539582 7.4:+4348533 MS.gene054411:CDS
CTAAGTCTCGATAGTGTGGT+AGG 0.540995 7.4:+4347270 MS.gene054411:CDS
TTCAAAGGCATTAGATCTCA+AGG 0.542872 7.4:+4347323 MS.gene054411:CDS
GTAGAAAGAAGTTTACTCAA+GGG 0.543204 7.4:+4348534 MS.gene054411:CDS
AAACATCATACATACCTCAA+TGG 0.547505 7.4:-4348151 None:intergenic
AGACGAGAATTCTGAAACAG+TGG 0.550727 7.4:+4346579 MS.gene054411:CDS
GCAGCATATACAGATTGGTA+TGG 0.551486 7.4:-4347216 None:intergenic
AATTCTCAAAGAAAGGAGGT+TGG 0.554584 7.4:+4348333 MS.gene054411:CDS
GACCTGGAATTGTTGCTCCA+TGG 0.556784 7.4:+4347357 MS.gene054411:CDS
GACGGGGCATTAATTTGCAC+AGG 0.557868 7.4:-4347702 None:intergenic
GGTGCAGATGGATCCCCACC+TGG 0.563183 7.4:-4347157 None:intergenic
AGACGAGAATTCTGAAACAG+TGG 0.563383 7.4:+4346681 MS.gene054411:CDS
AGACGAGAATTCTGAAACAG+TGG 0.563383 7.4:+4347020 MS.gene054411:CDS
TTGGAAACTCGAGTTGGGTG+GGG 0.565472 7.4:+4348352 MS.gene054411:CDS
AGGAGGTTGGAAACTCGAGT+TGG 0.571978 7.4:+4348346 MS.gene054411:CDS
TCACTCAAGGAAGTTAGAGC+GGG 0.572851 7.4:+4348479 MS.gene054411:CDS
GATCCGATTAAGCAATCTCT+CGG 0.573432 7.4:+4346756 MS.gene054411:CDS
AAAAGTAATTCCTCCAGATG+TGG 0.578065 7.4:-4347582 None:intergenic
AAGAGAAAGGAGATATTGAT+GGG 0.580175 7.4:-4347624 None:intergenic
TGTTATGCAGATTATCAGCA+TGG 0.581338 7.4:+4347996 MS.gene054411:intron
TGCGTTCTATCCACCAGGTG+GGG 0.581772 7.4:+4347144 MS.gene054411:CDS
TGACCGATTAAGCAATCTCT+CGG 0.587870 7.4:+4346624 MS.gene054411:CDS
TTGCGGGGCAGAATTCGTCC+AGG 0.590859 7.4:+4347435 MS.gene054411:CDS
CGAGAATTCTGAAACAGTGG+TGG 0.596138 7.4:+4347023 MS.gene054411:CDS
ATAGAAAGAACTTCAAGTGA+CGG 0.600777 7.4:-4347720 None:intergenic
ATCCGGTTGTCCACATCTGG+AGG 0.605027 7.4:+4347572 MS.gene054411:CDS
TGACCGATTAAGCGATCTCT+CGG 0.605594 7.4:+4346963 MS.gene054411:CDS
CCTATAGTTGCATCTCACAT+TGG 0.605957 7.4:+4347678 MS.gene054411:CDS
GGTTGGAAACTCGAGTTGGG+TGG 0.608269 7.4:+4348350 MS.gene054411:CDS
TGTATATTATAAATCACTCA+AGG 0.609042 7.4:+4348466 MS.gene054411:CDS
TAGAAAGAAGTTTACTCAAG+GGG 0.610799 7.4:+4348535 MS.gene054411:CDS
ATGCGTTCTATCCACCAGGT+GGG 0.613886 7.4:+4347143 MS.gene054411:CDS
AAATATCCGAGAATTGCAGT+TGG 0.613915 7.4:+4348079 MS.gene054411:CDS
ATCACTCAAGGAAGTTAGAG+CGG 0.615827 7.4:+4348478 MS.gene054411:CDS
TGACCGATTAAGCAATCTCT+CGG 0.617269 7.4:+4346726 MS.gene054411:CDS
GAAACTAAGTCTCGATAGTG+TGG 0.619964 7.4:+4347266 MS.gene054411:CDS
AAACATGCGTTCTATCCACC+AGG 0.623128 7.4:+4347139 MS.gene054411:CDS
AACCAGAAGATGTACACATG+TGG 0.628998 7.4:+4347298 MS.gene054411:CDS
AGACATGTCGGAGTTACGGA+TGG 0.631627 7.4:-4348375 None:intergenic
TCTCTGGTAATTCAAAGTGA+AGG 0.632891 7.4:-4347191 None:intergenic
ACCAGAAGATGTACACATGT+GGG 0.637381 7.4:+4347299 MS.gene054411:CDS
CTTGTGGTCTTGAAGTTGCG+GGG 0.638622 7.4:+4347420 MS.gene054411:CDS
GAGAATTCTGAAACAGTGGT+GGG 0.640621 7.4:+4347024 MS.gene054411:CDS
AGATGAAGAATCTTTAGTGA+CGG 0.643601 7.4:-4347486 None:intergenic
AGTCTGTATACACTCATGAA+AGG 0.644670 7.4:+4347840 MS.gene054411:CDS
TCATACCAATACTAGTACCG+AGG 0.645128 7.4:-4348568 None:intergenic
GTAATTCAAAGTGAAGGTCA+GGG 0.646636 7.4:-4347185 None:intergenic
CAAGGGGTCAGAGAAATCCT+CGG 0.659059 7.4:+4348551 MS.gene054411:CDS
AGACTGGTTGAAAGACATGT+CGG 0.659512 7.4:-4348387 None:intergenic
CATGCGTTCTATCCACCAGG+TGG 0.680902 7.4:+4347142 MS.gene054411:CDS
TCACACCTAGAAAGCCTAAG+CGG 0.681212 7.4:-4347393 None:intergenic
AGACGAGAATTATGAAACAG+TGG 0.690294 7.4:+4346813 MS.gene054411:CDS
AGAAAGAACTTCAAGTGACG+GGG 0.690501 7.4:-4347718 None:intergenic
GCAGATGGATCCCCACCTGG+TGG 0.714103 7.4:-4347154 None:intergenic
TATGCAGATTATCAGCATGG+AGG 0.721753 7.4:+4347999 MS.gene054411:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGATTTGATTTTTAATATT+AGG + chr7.4:4346647-4346666 MS.gene054411:CDS 10.0%
!! TCACAATTTATTATCTTTAT+CGG + chr7.4:4348053-4348072 MS.gene054411:CDS 15.0%
!!! AAGATTCTAATGATAATTTT+TGG + chr7.4:4348279-4348298 MS.gene054411:intron 15.0%
!!! ATGATTTGACTTTTAATATT+AGG + chr7.4:4346881-4346900 MS.gene054411:CDS 15.0%
!!! ATTTGCACAAATTTTTAAAA+AGG + chr7.4:4348184-4348203 MS.gene054411:intron 15.0%
!! CTCATTACATTTGAATTTAA+AGG + chr7.4:4348408-4348427 MS.gene054411:CDS 20.0%
!! TAATCTCTTTAATAAGAGAA+AGG - chr7.4:4347640-4347659 None:intergenic 20.0%
!! TATAGGCATGAATAAATAAA+GGG - chr7.4:4347664-4347683 None:intergenic 20.0%
!! TGAAAAAAATTCTCAAAGAA+AGG + chr7.4:4348326-4348345 MS.gene054411:CDS 20.0%
!! TGTATATTATAAATCACTCA+AGG + chr7.4:4348466-4348485 MS.gene054411:CDS 20.0%
!! TTGATATATATGAAAGAGAA+CGG - chr7.4:4346546-4346565 None:intergenic 20.0%
!! TTTACAACCTCATATATTAT+GGG - chr7.4:4347765-4347784 None:intergenic 20.0%
!!! ACGATTTGATTTTTCATATT+AGG + chr7.4:4346779-4346798 MS.gene054411:CDS 20.0%
!!! ATGTAATTTGTGTTTGTTTT+TGG + chr7.4:4346478-4346497 MS.gene054411:intron 20.0%
!!! GATTTTTAATATTAGGATTG+AGG + chr7.4:4346654-4346673 MS.gene054411:CDS 20.0%
! AAAAAATTCTCAAAGAAAGG+AGG + chr7.4:4348329-4348348 MS.gene054411:CDS 25.0%
! AAATTCAAATGTAATGAGAC+TGG - chr7.4:4348406-4348425 None:intergenic 25.0%
! AATGAAAAGAGATTTGCATA+TGG - chr7.4:4347967-4347986 None:intergenic 25.0%
! ACATAATACTCCAAAACTTA+AGG + chr7.4:4348122-4348141 MS.gene054411:CDS 25.0%
! ATACAAAACCCTAAATGAAA+AGG - chr7.4:4346393-4346412 None:intergenic 25.0%
! ATAGTTTAGAGACGAAATAA+TGG + chr7.4:4346319-4346338 MS.gene054411:intron 25.0%
! ATGAAAAGAGATTTGCATAT+GGG - chr7.4:4347966-4347985 None:intergenic 25.0%
! CTATAGGCATGAATAAATAA+AGG - chr7.4:4347665-4347684 None:intergenic 25.0%
! GTTCTCTTTCATATATATCA+AGG + chr7.4:4346545-4346564 MS.gene054411:intron 25.0%
! GTTTACAACCTCATATATTA+TGG - chr7.4:4347766-4347785 None:intergenic 25.0%
! TCAAAACATAAAAACTGAGT+TGG + chr7.4:4348434-4348453 MS.gene054411:CDS 25.0%
! TTCATATATATCAAGGATTG+AGG + chr7.4:4346552-4346571 MS.gene054411:intron 25.0%
!! ACTTAGTTTCCTGATATTTT+CGG - chr7.4:4347256-4347275 None:intergenic 25.0%
!! GACTTTTAATATTAGGATTG+AGG + chr7.4:4346888-4346907 MS.gene054411:CDS 25.0%
!! GATTTTTCATATTAGGATTG+AGG + chr7.4:4346786-4346805 MS.gene054411:CDS 25.0%
!! TATAAGACTCTTTTGTTGAT+AGG - chr7.4:4347119-4347138 None:intergenic 25.0%
AAACATCATACATACCTCAA+TGG - chr7.4:4348154-4348173 None:intergenic 30.0%
AAGAGAAAGGAGATATTGAT+GGG - chr7.4:4347627-4347646 None:intergenic 30.0%
AGATGAAGAATCTTTAGTGA+CGG - chr7.4:4347489-4347508 None:intergenic 30.0%
AGTAGAAAGAAGTTTACTCA+AGG + chr7.4:4348533-4348552 MS.gene054411:CDS 30.0%
ATAGAAAGAACTTCAAGTGA+CGG - chr7.4:4347723-4347742 None:intergenic 30.0%
GATCTCGATAAATTTCTATC+CGG + chr7.4:4347555-4347574 MS.gene054411:CDS 30.0%
GTAGAAAGAAGTTTACTCAA+GGG + chr7.4:4348534-4348553 MS.gene054411:CDS 30.0%
GTATACAGACTGTAAAAATC+TGG - chr7.4:4347831-4347850 None:intergenic 30.0%
TAAGAGAAAGGAGATATTGA+TGG - chr7.4:4347628-4347647 None:intergenic 30.0%
TAGAAAGAAGTTTACTCAAG+GGG + chr7.4:4348535-4348554 MS.gene054411:CDS 30.0%
TTCTACTACTTTCTCTGAAT+CGG - chr7.4:4348520-4348539 None:intergenic 30.0%
! TTTTCATATTAGGATTGAGG+AGG + chr7.4:4346789-4346808 MS.gene054411:CDS 30.0%
!! AATGTCAAATCATTGACTCT+TGG + chr7.4:4347870-4347889 MS.gene054411:CDS 30.0%
!! TTCATCCTGTGTTTTTATGA+AGG + chr7.4:4346361-4346380 MS.gene054411:intron 30.0%
AAAAGAGATTTGCATATGGG+TGG - chr7.4:4347963-4347982 None:intergenic 35.0%
AAAAGTAATTCCTCCAGATG+TGG - chr7.4:4347585-4347604 None:intergenic 35.0%
AAATATCCGAGAATTGCAGT+TGG + chr7.4:4348079-4348098 MS.gene054411:CDS 35.0%
AAGACCAAGTAAAAGATACG+CGG + chr7.4:4348249-4348268 MS.gene054411:intron 35.0%
AAGAGTAGCTTCATCAAGAT+TGG - chr7.4:4347793-4347812 None:intergenic 35.0%
AATGGTGTGTGAACTTAGAT+AGG + chr7.4:4346337-4346356 MS.gene054411:intron 35.0%
AATTCTCAAAGAAAGGAGGT+TGG + chr7.4:4348333-4348352 MS.gene054411:CDS 35.0%
AGACGAGAATTATGAAACAG+TGG + chr7.4:4346813-4346832 MS.gene054411:CDS 35.0%
AGTCTGTATACACTCATGAA+AGG + chr7.4:4347840-4347859 MS.gene054411:CDS 35.0%
ATCTTCGCCCATAATATATG+AGG + chr7.4:4347755-4347774 MS.gene054411:CDS 35.0%
CAATGCCTTCATAAAAACAC+AGG - chr7.4:4346369-4346388 None:intergenic 35.0%
CGTCTCTAAACTATCTATGA+TGG - chr7.4:4346313-4346332 None:intergenic 35.0%
GAAAAATCAAATCGTCTGAG+AGG - chr7.4:4347083-4347102 None:intergenic 35.0%
GTAATTCAAAGTGAAGGTCA+GGG - chr7.4:4347188-4347207 None:intergenic 35.0%
TAATCGATGCATGTATGACA+TGG + chr7.4:4346418-4346437 MS.gene054411:intron 35.0%
TAGAAAGAACTTCAAGTGAC+GGG - chr7.4:4347722-4347741 None:intergenic 35.0%
TCAAAAGAAGAACTGAATCC+TGG - chr7.4:4347456-4347475 None:intergenic 35.0%
TCTACTACTTTCTCTGAATC+GGG - chr7.4:4348519-4348538 None:intergenic 35.0%
TCTCTGGTAATTCAAAGTGA+AGG - chr7.4:4347194-4347213 None:intergenic 35.0%
TGTTATGCAGATTATCAGCA+TGG + chr7.4:4347996-4348015 MS.gene054411:intron 35.0%
! ATGGCAAGATCCTTAAGTTT+TGG - chr7.4:4348135-4348154 None:intergenic 35.0%
! GATTTTTCATATCACGATCG+AGG + chr7.4:4346993-4347012 MS.gene054411:CDS 35.0%
!! TCTGGAGGAATTACTTTTAG+AGG + chr7.4:4347587-4347606 MS.gene054411:CDS 35.0%
!! TTCAAAGGCATTAGATCTCA+AGG + chr7.4:4347323-4347342 MS.gene054411:CDS 35.0%
!!! AGGCATTGACCTTTTCATTT+AGG + chr7.4:4346381-4346400 MS.gene054411:intron 35.0%
!!! GGCATTGACCTTTTCATTTA+GGG + chr7.4:4346382-4346401 MS.gene054411:intron 35.0%
AACCAGAAGATGTACACATG+TGG + chr7.4:4347298-4347317 MS.gene054411:CDS 40.0%
ACAGATTGGTATGGAATCTC+TGG - chr7.4:4347210-4347229 None:intergenic 40.0%
ACCAGAAGATGTACACATGT+GGG + chr7.4:4347299-4347318 MS.gene054411:CDS 40.0%
ACTTAAGGATCTTGCCATTG+AGG + chr7.4:4348137-4348156 MS.gene054411:CDS 40.0%
AGAAAGAACTTCAAGTGACG+GGG - chr7.4:4347721-4347740 None:intergenic 40.0%
AGTAAAAGATACGCGGAGTT+TGG + chr7.4:4348256-4348275 MS.gene054411:intron 40.0%
ATCACTCAAGGAAGTTAGAG+CGG + chr7.4:4348478-4348497 MS.gene054411:CDS 40.0%
CATACTCCAACTGCAATTCT+CGG - chr7.4:4348088-4348107 None:intergenic 40.0%
CATCCGAGAGATTGCTTAAT+CGG - chr7.4:4346630-4346649 None:intergenic 40.0%
CCAATGTGAGATGCAACTAT+AGG - chr7.4:4347681-4347700 None:intergenic 40.0%
CCTATAGTTGCATCTCACAT+TGG + chr7.4:4347678-4347697 MS.gene054411:CDS 40.0%
GAAACTAAGTCTCGATAGTG+TGG + chr7.4:4347266-4347285 MS.gene054411:CDS 40.0%
GAAATCCTCGGTACTAGTAT+TGG + chr7.4:4348563-4348582 MS.gene054411:CDS 40.0%
GAAGAGCAGCATATACAGAT+TGG - chr7.4:4347224-4347243 None:intergenic 40.0%
GATCCGATTAAGCAATCTCT+CGG + chr7.4:4346756-4346775 MS.gene054411:CDS 40.0%
GCAGCATATACAGATTGGTA+TGG - chr7.4:4347219-4347238 None:intergenic 40.0%
GGTAATTCAAAGTGAAGGTC+AGG - chr7.4:4347189-4347208 None:intergenic 40.0%
TAAGACGCACCGAAAATATC+AGG + chr7.4:4347244-4347263 MS.gene054411:CDS 40.0%
TATGCAGATTATCAGCATGG+AGG + chr7.4:4347999-4348018 MS.gene054411:intron 40.0%
TCATACCAATACTAGTACCG+AGG - chr7.4:4348571-4348590 None:intergenic 40.0%
TGAAAGACATGTCGGAGTTA+CGG - chr7.4:4348382-4348401 None:intergenic 40.0%
TGACCGATTAAGCAATCTCT+CGG + chr7.4:4346624-4346643 MS.gene054411:CDS 40.0%
TGCATATGGGTGGCAAAATA+TGG - chr7.4:4347953-4347972 None:intergenic 40.0%
TGTACACATGTGGGTTTCAA+AGG + chr7.4:4347308-4347327 MS.gene054411:CDS 40.0%
! AACTATCTATGATGGTGCTC+AGG - chr7.4:4346305-4346324 None:intergenic 40.0%
! AACTCCGCGTATCTTTTACT+TGG - chr7.4:4348256-4348275 None:intergenic 40.0%
! ACTATCTATGATGGTGCTCA+GGG - chr7.4:4346304-4346323 None:intergenic 40.0%
! AGACTGGTTGAAAGACATGT+CGG - chr7.4:4348390-4348409 None:intergenic 40.0%
! GAAAAACCTTATTGCCGCTT+AGG + chr7.4:4347379-4347398 MS.gene054411:CDS 40.0%
!! AGACGAGAATTCTGAAACAG+TGG + chr7.4:4346579-4346598 MS.gene054411:CDS 40.0%
!! GAGAATTCTGAAACAGTGGT+GGG + chr7.4:4346583-4346602 MS.gene054411:CDS 40.0%
AAACATGCGTTCTATCCACC+AGG + chr7.4:4347139-4347158 MS.gene054411:CDS 45.0%
AAAGTGAAGGTCAGGGATCT+TGG - chr7.4:4347181-4347200 None:intergenic 45.0%
ACAATTCCAGGTCAAGTTCC+TGG - chr7.4:4347350-4347369 None:intergenic 45.0%
ACCCACATGTGTACATCTTC+TGG - chr7.4:4347303-4347322 None:intergenic 45.0%
AGAAAGCCTAAGCGGCAATA+AGG - chr7.4:4347388-4347407 None:intergenic 45.0%
ATCAGCATGGAGGACAAACT+TGG + chr7.4:4348009-4348028 MS.gene054411:CDS 45.0%
CGTCCGAGAGATTGCTTAAT+CGG - chr7.4:4346732-4346751 None:intergenic 45.0%
CGTCTGAGAGGTTGCTTAAT+CGG - chr7.4:4347071-4347090 None:intergenic 45.0%
CTAAGTCTCGATAGTGTGGT+AGG + chr7.4:4347270-4347289 MS.gene054411:CDS 45.0%
TCACACCTAGAAAGCCTAAG+CGG - chr7.4:4347396-4347415 None:intergenic 45.0%
TCACTCAAGGAAGTTAGAGC+GGG + chr7.4:4348479-4348498 MS.gene054411:CDS 45.0%
TGACCGATTAAGCGATCTCT+CGG + chr7.4:4346963-4346982 MS.gene054411:CDS 45.0%
TTCCATGGAGCAACAATTCC+AGG - chr7.4:4347362-4347381 None:intergenic 45.0%
TTCTAGGTGTGAGTCACTTG+TGG + chr7.4:4347404-4347423 MS.gene054411:CDS 45.0%
! ACTTGTGGTCTTGAAGTTGC+GGG + chr7.4:4347419-4347438 MS.gene054411:CDS 45.0%
! CACTTGTGGTCTTGAAGTTG+CGG + chr7.4:4347418-4347437 MS.gene054411:CDS 45.0%
! GCGGCAATAAGGTTTTTCCA+TGG - chr7.4:4347377-4347396 None:intergenic 45.0%
! TATTGCCGCTTAGGCTTTCT+AGG + chr7.4:4347388-4347407 MS.gene054411:CDS 45.0%
!! CGAGAATTCTGAAACAGTGG+TGG + chr7.4:4346582-4346601 MS.gene054411:CDS 45.0%
AGACATGTCGGAGTTACGGA+TGG - chr7.4:4348378-4348397 None:intergenic 50.0%
AGGAGGTTGGAAACTCGAGT+TGG + chr7.4:4348346-4348365 MS.gene054411:CDS 50.0%
ATGCGTTCTATCCACCAGGT+GGG + chr7.4:4347143-4347162 MS.gene054411:CDS 50.0%
CAAGGGGTCAGAGAAATCCT+CGG + chr7.4:4348551-4348570 MS.gene054411:CDS 50.0%
CGTCCGAGAGATCGCTTAAT+CGG - chr7.4:4346969-4346988 None:intergenic 50.0%
GACCTGGAATTGTTGCTCCA+TGG + chr7.4:4347357-4347376 MS.gene054411:CDS 50.0%
GGAGGTTGGAAACTCGAGTT+GGG + chr7.4:4348347-4348366 MS.gene054411:CDS 50.0%
GGCATTAGATCTCAAGGTCC+AGG + chr7.4:4347329-4347348 MS.gene054411:CDS 50.0%
TCTATCCGGTTGTCCACATC+TGG + chr7.4:4347569-4347588 MS.gene054411:CDS 50.0%
TTCCTCCAGATGTGGACAAC+CGG - chr7.4:4347577-4347596 None:intergenic 50.0%
! CTTGTGGTCTTGAAGTTGCG+GGG + chr7.4:4347420-4347439 MS.gene054411:CDS 50.0%
!! GACGGGGCATTAATTTGCAC+AGG - chr7.4:4347705-4347724 None:intergenic 50.0%
!! GTTGGAAACTCGAGTTGGGT+GGG + chr7.4:4348351-4348370 MS.gene054411:CDS 50.0%
!! TTGGAAACTCGAGTTGGGTG+GGG + chr7.4:4348352-4348371 MS.gene054411:CDS 50.0%
ATCCGGTTGTCCACATCTGG+AGG + chr7.4:4347572-4347591 MS.gene054411:CDS 55.0%
CAAGGTCCAGGAACTTGACC+TGG + chr7.4:4347341-4347360 MS.gene054411:CDS 55.0%
CATGCGTTCTATCCACCAGG+TGG + chr7.4:4347142-4347161 MS.gene054411:CDS 55.0%
TGCGTTCTATCCACCAGGTG+GGG + chr7.4:4347144-4347163 MS.gene054411:CDS 55.0%
! GTCAGGGATCTTGGTGCAGA+TGG - chr7.4:4347172-4347191 None:intergenic 55.0%
!! GGTTGGAAACTCGAGTTGGG+TGG + chr7.4:4348350-4348369 MS.gene054411:CDS 55.0%
TTGCGGGGCAGAATTCGTCC+AGG + chr7.4:4347435-4347454 MS.gene054411:CDS 60.0%
GCAGATGGATCCCCACCTGG+TGG - chr7.4:4347157-4347176 None:intergenic 65.0%
GGTGCAGATGGATCCCCACC+TGG - chr7.4:4347160-4347179 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 4346262 4348590 4346262 ID=MS.gene054411
chr7.4 mRNA 4346262 4348590 4346262 ID=MS.gene054411.t1;Parent=MS.gene054411
chr7.4 exon 4346262 4346266 4346262 ID=MS.gene054411.t1.exon1;Parent=MS.gene054411.t1
chr7.4 CDS 4346262 4346266 4346262 ID=cds.MS.gene054411.t1;Parent=MS.gene054411.t1
chr7.4 exon 4346567 4347908 4346567 ID=MS.gene054411.t1.exon2;Parent=MS.gene054411.t1
chr7.4 CDS 4346567 4347908 4346567 ID=cds.MS.gene054411.t1;Parent=MS.gene054411.t1
chr7.4 exon 4348006 4348158 4348006 ID=MS.gene054411.t1.exon3;Parent=MS.gene054411.t1
chr7.4 CDS 4348006 4348158 4348006 ID=cds.MS.gene054411.t1;Parent=MS.gene054411.t1
chr7.4 exon 4348318 4348590 4348318 ID=MS.gene054411.t1.exon4;Parent=MS.gene054411.t1
chr7.4 CDS 4348318 4348590 4348318 ID=cds.MS.gene054411.t1;Parent=MS.gene054411.t1
Gene Sequence

>MS.gene054411

ATGAGGTAAGTTTTTTTCTCAATGTTAATTTTGTTTTAACCCTGAGCACCATCATAGATAGTTTAGAGACGAAATAATGGTGTGTGAACTTAGATAGGATTCATCCTGTGTTTTTATGAAGGCATTGACCTTTTCATTTAGGGTTTTGTATTTTCATAATCGATGCATGTATGACATGGACATGATATTATATGATTTTTCTTTTCTTTTTGAGTAATGTAATTTGTGTTTGTTTTTGGATCAGACTTTGAATAATTCTATGAAAGCATTTTTTTTAGTAACCGTTCTCTTTCATATATATCAAGGATTGAGGAAGTAGACGAGAATTCTGAAACAGTGGTGTGCTCTTACGAAGAAGAACATGACCGATTAAGCAATCTCTCGGATGATTTGATTTTTAATATTAGGATTGAGGAAGCAGACGAGAATTCTGAAACAGTGGTGTGCTCTTACGATGAAGAACATGACCGATTAAGCAATCTCTCGGACGATTTGATCCGATTAAGCAATCTCTCGGACGATTTGATTTTTCATATTAGGATTGAGGAGGTAGACGAGAATTATGAAACAGTGGTGTGCTCTTACGAAGAAGAACATGATCGATTAAGCAATTTCTCAGATGATTTGACTTTTAATATTAGGATTGAGGAAGCAGAAGAGAATTATTCTGAAACAGCAGTGTGCTCGTACGATGAAGAACATGACCGATTAAGCGATCTCTCGGACGATTTGATTTTTCATATCACGATCGAGGAAGCAGACGAGAATTCTGAAACAGTGGTGGGCTCTTACGATGAAGAACATGACCGATTAAGCAACCTCTCAGACGATTTGATTTTTCATATTTTGTCTTTCCTATCAACAAAAGAGTCTTATAAAACATGCGTTCTATCCACCAGGTGGGGATCCATCTGCACCAAGATCCCTGACCTTCACTTTGAATTACCAGAGATTCCATACCAATCTGTATATGCTGCTCTTCTAAGACGCACCGAAAATATCAGGAAACTAAGTCTCGATAGTGTGGTAGGCTGTCAACCAGAAGATGTACACATGTGGGTTTCAAAGGCATTAGATCTCAAGGTCCAGGAACTTGACCTGGAATTGTTGCTCCATGGAAAAACCTTATTGCCGCTTAGGCTTTCTAGGTGTGAGTCACTTGTGGTCTTGAAGTTGCGGGGCAGAATTCGTCCAGGATTCAGTTCTTCTTTTGATGTATATTTACCGTCACTAAAGATTCTTCATCTTCGATTAACTGTGTTACTTTCTATGTTTGACGATCATATCGAGTATGATCTCGATAAATTTCTATCCGGTTGTCCACATCTGGAGGAATTACTTTTAGAGGACATCTTTCAACAACCCATCAATATCTCCTTTCTCTTATTAAAGAGATTAACCCTTTATTTATTCATGCCTATAGTTGCATCTCACATTGGTCCTGTGCAAATTAATGCCCCGTCACTTGAAGTTCTTTCTATTACTGATTATTCATCTTCGCCCATAATATATGAGGTTGTAAACTTGTCCAATCTTGATGAAGCTACTCTTTTCATTGATCAGCTTCCAGATTTTTACAGTCTGTATACACTCATGAAAGGACTTTCTAATGTCAAATCATTGACTCTTGGTTCTAAAGCTTTTGATGTAAGTTTAATAATTTTTTCTTTCTTTTTTAATGATAATTTCCATATTTTGCCACCCATATGCAAATCTCTTTTCATTCTTTAATCTTGTTATGCAGATTATCAGCATGGAGGACAAACTTGGAAAAGTACATCTTCTCACTTTTCACAATTTATTATCTTTATCGGTTGAAATATCCGAGAATTGCAGTTGGAGTATGCTTGTTTGCTTTCTACATAATACTCCAAAACTTAAGGATCTTGCCATTGAGGTATGTATGATGTTTTCTCAACTATATTTGCACAAATTTTTAAAAAGGTAAAATATATTAATAAGCTCAAAATCTAGCACAAGAAATGCAAAGACCAAGTAAAAGATACGCGGAGTTTGGAAGATTCTAATGATAATTTTTGGTGTTGTTTACATGCAGAAAGAAATTGAAAAAAATTCTCAAAGAAAGGAGGTTGGAAACTCGAGTTGGGTGGGGCCATCCGTAACTCCGACATGTCTTTCAACCAGTCTCATTACATTTGAATTTAAAGGAATTCAAAACATAAAAACTGAGTTGGACTTTGCGCTGTATATTATAAATCACTCAAGGAAGTTAGAGCGGGTAAAGATTTTCACACCCGATTCAGAGAAAGTAGTAGAAAGAAGTTTACTCAAGGGGTCAGAGAAATCCTCGGTACTAGTATTGGTATGA

Protein sequence

>MS.gene054411.t1

MRIEEVDENSETVVCSYEEEHDRLSNLSDDLIFNIRIEEADENSETVVCSYDEEHDRLSNLSDDLIRLSNLSDDLIFHIRIEEVDENYETVVCSYEEEHDRLSNFSDDLTFNIRIEEAEENYSETAVCSYDEEHDRLSDLSDDLIFHITIEEADENSETVVGSYDEEHDRLSNLSDDLIFHILSFLSTKESYKTCVLSTRWGSICTKIPDLHFELPEIPYQSVYAALLRRTENIRKLSLDSVVGCQPEDVHMWVSKALDLKVQELDLELLLHGKTLLPLRLSRCESLVVLKLRGRIRPGFSSSFDVYLPSLKILHLRLTVLLSMFDDHIEYDLDKFLSGCPHLEELLLEDIFQQPINISFLLLKRLTLYLFMPIVASHIGPVQINAPSLEVLSITDYSSSPIIYEVVNLSNLDEATLFIDQLPDFYSLYTLMKGLSNVKSLTLGSKAFDIISMEDKLGKVHLLTFHNLLSLSVEISENCSWSMLVCFLHNTPKLKDLAIEKEIEKNSQRKEVGNSSWVGPSVTPTCLSTSLITFEFKGIQNIKTELDFALYIINHSRKLERVKIFTPDSEKVVERSLLKGSEKSSVLVLV