AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene60521


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene60521.t1 MTR_4g056040 61.684 475 143 6 1 440 1 471 0.0 533
MS.gene60521.t1 MTR_4g056020 63.265 441 153 5 1 436 1 437 0.0 516
MS.gene60521.t1 MTR_4g056030 62.585 441 156 5 1 436 1 437 6.17e-178 506
MS.gene60521.t1 MTR_1g038710 63.677 446 147 7 1 436 11 451 3.48e-176 501
MS.gene60521.t1 MTR_4g055990 58.385 483 150 8 1 436 1 479 7.54e-170 487
MS.gene60521.t1 MTR_4g055580 59.623 478 146 8 1 436 92 564 1.21e-169 489
MS.gene60521.t1 MTR_4g055990 58.385 483 150 8 1 436 1 479 1.66e-169 486
MS.gene60521.t1 MTR_1g090883 69.714 350 102 2 2 351 12 357 6.21e-168 477
MS.gene60521.t1 MTR_4g056070 59.184 441 132 7 1 397 1 437 1.74e-160 461
MS.gene60521.t1 MTR_1g090900 92.697 178 13 0 1 178 1 178 2.54e-113 332
MS.gene60521.t1 MTR_7g110920 53.203 359 106 6 101 436 1 320 2.34e-106 318
MS.gene60521.t1 MTR_4g093690 56.618 272 105 9 6 272 13 276 1.58e-79 248
MS.gene60521.t1 MTR_4g056020 65.957 141 43 2 301 436 1 141 8.67e-55 180
MS.gene60521.t1 MTR_4g056010 70.968 93 26 1 75 167 6 97 8.24e-34 122
MS.gene60521.t1 MTR_5g084070 31.075 428 254 15 5 421 7 404 1.21e-30 123
MS.gene60521.t1 MTR_1g090890 66.279 86 27 1 351 436 33 116 2.46e-29 111
MS.gene60521.t1 MTR_5g080710 29.929 421 252 16 11 416 33 425 3.85e-27 113
MS.gene60521.t1 MTR_8g445780 28.395 405 247 14 9 396 11 389 1.59e-25 108
MS.gene60521.t1 MTR_8g014260 26.793 474 277 16 8 453 13 444 1.87e-25 108
MS.gene60521.t1 MTR_4g032730 26.362 459 251 14 7 411 11 436 2.93e-24 105
MS.gene60521.t1 MTR_8g468810 28.538 431 271 18 9 418 23 437 1.69e-23 103
MS.gene60521.t1 MTR_8g467800 28.767 438 275 15 4 421 13 433 4.65e-23 101
MS.gene60521.t1 MTR_8g062270 28.074 431 258 17 11 411 16 424 1.77e-22 99.8
MS.gene60521.t1 MTR_7g115270 28.365 416 227 17 10 411 11 369 1.14e-21 97.1
MS.gene60521.t1 MTR_6g011460 27.644 416 210 16 11 411 46 385 1.28e-21 97.1
MS.gene60521.t1 MTR_7g034115 26.456 412 221 11 11 411 11 351 3.53e-21 95.1
MS.gene60521.t1 MTR_3g108560 28.851 409 217 15 8 411 17 356 9.10e-21 94.4
MS.gene60521.t1 MTR_7g098570 26.942 412 219 13 11 411 20 360 1.67e-20 94.4
MS.gene60521.t1 MTR_8g468840 26.526 426 271 16 10 411 13 420 4.05e-20 92.8
MS.gene60521.t1 MTR_3g107100 28.132 423 221 18 7 415 7 360 4.93e-20 92.0
MS.gene60521.t1 MTR_4g080590 26.761 426 262 17 10 412 22 420 1.55e-19 91.3
MS.gene60521.t1 MTR_2g005990 25.734 443 232 16 11 424 6 380 2.93e-19 89.7
MS.gene60521.t1 MTR_1g085120 27.252 433 221 15 11 423 92 450 7.26e-19 89.4
MS.gene60521.t1 MTR_7g007080 29.040 427 206 21 9 412 2 354 1.19e-18 87.8
MS.gene60521.t1 MTR_1g085120 27.027 444 227 16 3 423 156 525 1.21e-18 89.0
MS.gene60521.t1 MTR_4g039440 26.570 414 220 17 11 411 34 376 1.82e-18 87.4
MS.gene60521.t1 MTR_5g045170 25.527 427 224 16 13 420 16 367 2.17e-18 87.0
MS.gene60521.t1 MTR_0492s0020 26.914 405 223 13 9 411 84 417 2.83e-18 87.0
MS.gene60521.t1 MTR_3g108150 28.256 407 225 14 9 411 11 354 2.89e-18 86.7
MS.gene60521.t1 MTR_5g039950 25.899 417 243 14 10 411 22 387 3.79e-18 86.7
MS.gene60521.t1 MTR_0543s0010 26.914 405 223 13 9 411 84 417 4.45e-18 86.7
MS.gene60521.t1 MTR_1g053025 25.173 433 245 12 11 424 2 374 4.74e-18 86.3
MS.gene60521.t1 MTR_2g083840 27.187 423 269 15 9 411 19 422 5.67e-18 86.3
MS.gene60521.t1 MTR_7g056433 26.014 419 226 15 7 411 8 356 6.20e-18 85.9
MS.gene60521.t1 MTR_8g058970 26.398 447 274 15 4 411 12 442 6.71e-18 86.3
MS.gene60521.t1 MTR_8g467800 30.994 342 200 14 5 332 14 333 1.13e-17 84.3
MS.gene60521.t1 MTR_4g080590 29.121 364 210 15 10 350 22 360 2.27e-17 84.0
MS.gene60521.t1 MTR_3g109982 26.211 454 270 13 10 416 12 447 2.35e-17 85.1
MS.gene60521.t1 MTR_1g041245 33.862 189 112 4 11 195 11 190 3.12e-17 83.6
MS.gene60521.t1 MTR_7g033945 35.329 167 93 4 11 167 11 172 4.13e-17 79.3
MS.gene60521.t1 MTR_3g087260 26.770 452 253 14 10 416 11 429 5.33e-17 83.6
MS.gene60521.t1 MTR_6g022500 27.378 431 216 19 2 411 89 443 5.58e-17 83.6
MS.gene60521.t1 MTR_3g048290 25.000 428 284 12 7 411 19 432 5.92e-17 83.6
MS.gene60521.t1 MTR_7g060470 26.450 431 236 18 11 422 3 371 1.02e-16 82.0
MS.gene60521.t1 MTR_1g107385 27.149 442 231 17 10 424 31 408 1.35e-16 82.0
MS.gene60521.t1 MTR_7g055943 25.459 436 234 15 11 426 40 404 3.13e-16 80.9
MS.gene60521.t1 MTR_7g056277 24.940 417 227 14 11 416 259 600 4.73e-16 80.9
MS.gene60521.t1 MTR_7g033990 25.121 414 224 14 11 411 11 351 5.10e-16 80.1
MS.gene60521.t1 MTR_7g056287 24.824 427 235 15 11 426 3 354 6.45e-16 79.3
MS.gene60521.t1 MTR_3g023630 24.823 423 223 13 5 411 2 345 9.72e-16 79.0
MS.gene60521.t1 MTR_7g088260 24.939 413 235 14 9 414 89 433 2.23e-15 78.6
MS.gene60521.t1 MTR_3g082890 25.776 419 238 15 8 411 94 454 3.71e-15 77.8
MS.gene60521.t1 MTR_7g033915 37.063 143 78 3 11 143 11 151 4.72e-15 76.6
MS.gene60521.t1 MTR_4g081030 29.412 340 195 14 7 327 13 326 1.04e-14 75.9
MS.gene60521.t1 MTR_2g007500 25.806 403 193 19 11 388 14 335 1.38e-14 75.1
MS.gene60521.t1 MTR_7g032380 32.934 167 102 3 11 172 11 172 1.66e-14 75.1
MS.gene60521.t1 MTR_3g099900 25.316 395 245 16 8 379 15 382 2.15e-14 75.1
MS.gene60521.t1 MTR_4g080773 26.498 434 268 16 11 411 19 434 2.50e-14 75.5
MS.gene60521.t1 MTR_4g080773 26.498 434 268 16 11 411 19 434 2.58e-14 75.5
MS.gene60521.t1 MTR_3g014590 27.987 318 194 9 1 302 1 299 8.01e-14 73.2
MS.gene60521.t1 MTR_1g085120 27.614 373 175 15 3 352 168 468 1.39e-13 72.8
MS.gene60521.t1 MTR_4g045900 24.313 473 282 15 11 418 26 487 1.62e-13 72.8
MS.gene60521.t1 MTR_3g107160 24.344 419 241 13 4 411 3 356 1.65e-13 72.4
MS.gene60521.t1 MTR_3g014550 25.890 309 213 5 1 302 1 300 1.73e-13 72.0
MS.gene60521.t1 MTR_6g022360 29.437 231 116 9 11 221 43 246 1.79e-13 72.4
MS.gene60521.t1 MTR_5g005690 28.571 217 143 4 7 219 17 225 2.51e-13 72.0
MS.gene60521.t1 MTR_8g085430 27.354 223 140 5 1 211 1 213 2.76e-13 71.2
MS.gene60521.t1 MTR_7g056447 34.826 201 112 7 4 198 2 189 3.74e-13 70.1
MS.gene60521.t1 MTR_5g058100 24.460 417 224 12 11 411 9 350 5.91e-13 70.5
MS.gene60521.t1 MTR_8g062310 26.914 431 247 21 1 412 15 396 6.06e-13 70.9
MS.gene60521.t1 MTR_6g040270 25.061 411 221 16 13 411 10 345 6.47e-13 70.5
MS.gene60521.t1 MTR_4g050930 25.994 327 222 8 9 326 27 342 1.01e-12 70.1
MS.gene60521.t1 MTR_2g047848 25.664 452 246 19 7 419 3 403 1.12e-12 70.1
MS.gene60521.t1 MTR_3g107120 26.950 423 220 15 11 411 9 364 1.31e-12 69.7
MS.gene60521.t1 MTR_5g040850 27.191 445 241 21 7 419 3 396 1.67e-12 69.3
MS.gene60521.t1 MTR_7g039630 28.610 367 186 14 10 350 22 338 1.73e-12 68.9
MS.gene60521.t1 MTR_1g013560 25.056 443 240 18 7 409 15 405 1.89e-12 69.3
MS.gene60521.t1 MTR_4g050930 25.994 327 222 8 9 326 27 342 2.50e-12 68.9
MS.gene60521.t1 MTR_7g033940 34.921 126 76 2 13 134 96 219 3.35e-12 66.2
MS.gene60521.t1 MTR_1g108820 25.952 420 233 15 11 419 8 360 3.95e-12 68.2
MS.gene60521.t1 MTR_7g023310 21.546 427 290 12 8 411 23 427 7.96e-12 67.4
MS.gene60521.t1 MTR_4g045680 26.646 319 205 12 4 308 10 313 1.04e-11 66.6
MS.gene60521.t1 MTR_4g090940 27.139 339 208 10 8 326 156 475 1.08e-11 67.4
MS.gene60521.t1 MTR_5g073420 24.018 433 234 14 11 425 11 366 1.25e-11 66.6
MS.gene60521.t1 MTR_4g024680 30.612 196 107 8 7 201 518 685 1.98e-11 66.6
MS.gene60521.t1 MTR_3g108560 28.693 352 177 15 8 354 17 299 2.03e-11 65.5
MS.gene60521.t1 MTR_8g014160 28.391 317 185 12 4 295 34 333 2.07e-11 65.9
MS.gene60521.t1 MTR_4g092300 26.347 334 225 6 7 326 21 347 2.11e-11 66.6
MS.gene60521.t1 MTR_7g017280 25.220 341 223 11 8 324 145 477 2.11e-11 66.2
MS.gene60521.t1 MTR_4g051480 26.347 334 225 6 7 326 21 347 2.11e-11 66.6
MS.gene60521.t1 MTR_4g092430 24.219 384 255 10 7 371 39 405 2.32e-11 66.2
MS.gene60521.t1 MTR_4g130200 24.819 415 235 15 10 416 19 364 2.83e-11 65.5
MS.gene60521.t1 MTR_7g098510 33.529 170 99 5 11 173 18 180 4.41e-11 64.7
MS.gene60521.t1 MTR_4g024780 29.949 197 125 7 10 201 145 333 5.22e-11 65.1
MS.gene60521.t1 MTR_4g080787 23.788 433 278 16 11 411 19 431 5.40e-11 65.1
MS.gene60521.t1 MTR_7g032370 32.258 155 96 4 22 172 1 150 6.32e-11 63.9
MS.gene60521.t1 MTR_1089s0010 23.040 421 231 13 5 411 2 343 7.31e-11 63.9
MS.gene60521.t1 MTR_7g056430 27.725 422 198 14 10 416 8 337 7.82e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene60521.t1 AT4G10400 31.553 412 236 17 11 411 2 378 2.62e-31 124
MS.gene60521.t1 AT4G10400 31.553 412 236 17 11 411 2 378 2.62e-31 124
MS.gene60521.t1 AT4G10400 31.553 412 236 17 11 411 2 378 2.62e-31 124
MS.gene60521.t1 AT4G26340 28.941 425 260 16 11 422 2 397 2.92e-31 124
MS.gene60521.t1 AT2G26860 29.187 418 258 14 10 411 1 396 4.30e-29 118
MS.gene60521.t1 AT2G26860 29.187 418 258 14 10 411 1 396 4.30e-29 118
MS.gene60521.t1 AT4G00315 28.736 435 258 19 11 416 2 413 5.09e-29 119
MS.gene60521.t1 AT3G59190 31.733 375 208 13 10 351 11 370 4.90e-28 115
MS.gene60521.t1 AT5G60610 29.412 425 236 18 11 411 2 386 5.90e-28 115
MS.gene60521.t1 AT5G60610 29.412 425 236 18 11 411 2 386 5.90e-28 115
MS.gene60521.t1 AT3G59190 31.733 375 208 13 10 351 11 370 9.10e-28 116
MS.gene60521.t1 AT1G55660 28.018 439 256 21 11 416 53 464 3.08e-27 114
MS.gene60521.t1 AT3G59230 27.902 448 263 16 10 412 11 443 4.26e-27 114
MS.gene60521.t1 AT5G56370 28.673 422 254 18 11 420 2 388 1.04e-26 112
MS.gene60521.t1 AT5G56370 28.673 422 254 18 11 420 2 388 1.04e-26 112
MS.gene60521.t1 AT5G56400 27.700 426 265 14 1 411 23 420 7.30e-25 107
MS.gene60521.t1 AT5G56420 28.505 428 262 16 10 426 5 399 2.01e-24 105
MS.gene60521.t1 AT5G56420 28.505 428 262 16 10 426 5 399 2.01e-24 105
MS.gene60521.t1 AT5G56420 28.505 428 262 16 10 426 5 399 2.01e-24 105
MS.gene60521.t1 AT4G26350 27.002 437 262 17 11 422 2 406 3.27e-24 104
MS.gene60521.t1 AT5G38590 28.883 412 256 15 11 413 2 385 3.91e-24 104
MS.gene60521.t1 AT2G04230 27.455 448 264 15 9 430 11 423 1.46e-23 103
MS.gene60521.t1 AT5G62970 27.706 462 256 21 11 426 2 431 1.55e-23 103
MS.gene60521.t1 AT4G14103 28.962 366 219 13 10 351 7 355 1.60e-23 102
MS.gene60521.t1 AT4G14103 28.962 366 219 13 10 351 7 355 1.60e-23 102
MS.gene60521.t1 AT5G41840 27.907 387 218 11 11 351 14 385 2.07e-23 103
MS.gene60521.t1 AT4G14103 29.428 367 216 14 10 351 7 355 3.04e-23 102
MS.gene60521.t1 AT5G56440 27.739 429 249 16 11 411 2 397 1.39e-22 100
MS.gene60521.t1 AT5G56380 25.285 439 281 11 11 424 2 418 1.92e-22 99.8
MS.gene60521.t1 AT5G56380 25.285 439 281 11 11 424 2 418 1.92e-22 99.8
MS.gene60521.t1 AT2G42720 30.518 367 208 14 11 351 2 347 1.98e-22 99.8
MS.gene60521.t1 AT3G52680 29.358 436 244 17 9 421 19 413 4.73e-22 98.6
MS.gene60521.t1 AT3G50710 28.087 413 256 13 11 407 2 389 5.03e-22 98.2
MS.gene60521.t1 AT3G26930 28.333 420 261 16 2 409 12 403 5.36e-22 98.6
MS.gene60521.t1 AT5G41830 28.346 381 223 14 6 351 8 373 5.78e-22 99.0
MS.gene60521.t1 AT5G53635 28.337 427 253 18 13 411 2 403 6.60e-22 98.2
MS.gene60521.t1 AT1G51370 27.400 427 259 16 3 411 11 404 7.37e-22 97.8
MS.gene60521.t1 AT4G14096 26.852 432 266 18 10 412 7 417 1.09e-21 97.8
MS.gene60521.t1 AT4G14096 26.852 432 266 18 10 412 7 417 1.09e-21 97.8
MS.gene60521.t1 AT4G00160 28.266 421 256 12 10 413 15 406 1.10e-21 97.4
MS.gene60521.t1 AT4G09920 31.419 296 182 10 10 299 1 281 1.33e-21 95.1
MS.gene60521.t1 AT4G09920 31.419 296 182 10 10 299 1 281 1.33e-21 95.1
MS.gene60521.t1 AT4G09920 31.419 296 182 10 10 299 1 281 1.33e-21 95.1
MS.gene60521.t1 AT4G00320 26.406 409 248 13 6 378 8 399 3.15e-21 96.7
MS.gene60521.t1 AT1G32375 26.118 425 266 14 11 417 2 396 3.57e-21 95.9
MS.gene60521.t1 AT1G32375 26.118 425 266 14 11 417 2 396 3.57e-21 95.9
MS.gene60521.t1 AT5G44950 25.676 444 270 17 10 421 3 418 4.99e-21 95.5
MS.gene60521.t1 AT4G09920 31.399 293 180 10 11 297 2 279 1.14e-20 92.8
MS.gene60521.t1 AT4G09920 31.399 293 180 10 11 297 2 279 1.14e-20 92.8
MS.gene60521.t1 AT1G78760 27.655 452 254 18 9 426 14 426 2.02e-20 94.0
MS.gene60521.t1 AT5G56370 29.226 349 205 16 10 350 1 315 4.47e-20 91.3
MS.gene60521.t1 AT3G58960 25.330 454 271 16 11 413 2 438 8.58e-20 92.0
MS.gene60521.t1 AT3G59200 28.684 380 212 14 10 351 6 364 8.69e-20 90.9
MS.gene60521.t1 AT3G59250 26.651 439 254 15 10 426 6 398 9.08e-20 91.7
MS.gene60521.t1 AT3G59160 24.450 409 242 12 10 365 12 406 1.51e-19 91.3
MS.gene60521.t1 AT3G59200 28.609 381 213 14 10 352 6 365 1.93e-19 91.3
MS.gene60521.t1 AT3G49030 27.578 417 261 16 10 413 20 408 2.83e-19 90.1
MS.gene60521.t1 AT5G18770 26.201 458 292 15 4 433 17 456 3.08e-19 90.5
MS.gene60521.t1 AT5G53840 27.465 426 261 17 4 411 11 406 4.31e-19 89.7
MS.gene60521.t1 AT4G13965 27.674 430 252 21 9 420 8 396 5.83e-19 89.4
MS.gene60521.t1 AT3G26930 27.792 385 238 16 37 409 2 358 6.07e-19 89.0
MS.gene60521.t1 AT5G22610 27.074 458 270 17 3 433 10 430 6.37e-19 89.4
MS.gene60521.t1 AT1G55660 28.972 321 181 15 10 301 52 354 1.02e-18 87.8
MS.gene60521.t1 AT3G59210 27.467 375 224 11 7 351 3 359 1.28e-18 88.6
MS.gene60521.t1 AT3G59210 27.467 375 224 11 7 351 3 359 1.28e-18 88.6
MS.gene60521.t1 AT3G59210 27.467 375 224 11 7 351 3 359 1.28e-18 88.6
MS.gene60521.t1 AT3G59210 27.467 375 224 11 7 351 3 359 1.28e-18 88.6
MS.gene60521.t1 AT3G59210 27.467 375 224 11 7 351 3 359 1.28e-18 88.6
MS.gene60521.t1 AT3G54910 28.319 339 214 10 77 411 29 342 1.40e-18 87.4
MS.gene60521.t1 AT3G54910 28.319 339 214 10 77 411 29 342 1.40e-18 87.4
MS.gene60521.t1 AT3G54910 28.319 339 214 10 77 411 29 342 1.40e-18 87.4
MS.gene60521.t1 AT5G56410 25.821 457 281 17 11 433 2 434 1.41e-18 88.6
MS.gene60521.t1 AT5G22730 25.935 428 267 16 10 409 27 432 1.57e-18 88.2
MS.gene60521.t1 AT5G22730 25.935 428 267 16 10 409 27 432 1.57e-18 88.2
MS.gene60521.t1 AT4G10420 29.283 321 187 12 101 411 1 291 3.65e-18 85.5
MS.gene60521.t1 AT5G22610 27.273 473 280 19 3 433 10 460 5.81e-18 86.7
MS.gene60521.t1 AT5G18780 25.952 420 268 16 10 409 10 406 7.15e-18 85.9
MS.gene60521.t1 AT5G18780 25.952 420 268 16 10 409 10 406 7.15e-18 85.9
MS.gene60521.t1 AT2G42730 26.991 452 269 19 10 424 4 431 7.73e-18 85.9
MS.gene60521.t1 AT4G13960 25.835 449 272 15 11 422 2 426 1.15e-17 85.5
MS.gene60521.t1 AT4G13960 25.835 449 272 15 11 422 2 426 1.15e-17 85.5
MS.gene60521.t1 AT5G38570 24.760 416 246 12 11 422 2 354 1.69e-17 84.3
MS.gene60521.t1 AT5G50270 26.118 425 273 16 11 419 2 401 2.71e-17 84.0
MS.gene60521.t1 AT3G58860 25.053 471 286 15 8 439 4 446 3.58e-17 84.0
MS.gene60521.t1 AT5G22700 28.066 424 254 16 11 408 6 404 4.28e-17 83.6
MS.gene60521.t1 AT5G22700 28.066 424 254 16 11 408 6 404 4.28e-17 83.6
MS.gene60521.t1 AT5G22700 28.066 424 254 16 11 408 6 404 4.28e-17 83.6
MS.gene60521.t1 AT5G22700 28.066 424 254 16 11 408 6 404 4.28e-17 83.6
MS.gene60521.t1 AT1G51370 27.068 399 241 15 3 384 11 376 6.31e-17 82.8
MS.gene60521.t1 AT1G51370 29.388 245 148 7 3 244 11 233 9.40e-17 81.6
MS.gene60521.t1 AT5G27750 25.282 443 266 15 11 411 5 424 1.05e-16 82.4
MS.gene60521.t1 AT5G22700 28.066 424 254 16 11 408 43 441 1.08e-16 82.8
MS.gene60521.t1 AT1G58310 24.380 484 286 16 5 426 2 467 1.09e-16 82.8
MS.gene60521.t1 AT5G38590 30.847 295 180 12 10 298 1 277 1.45e-16 80.5
MS.gene60521.t1 AT3G03040 26.273 373 227 11 11 351 2 358 1.81e-16 82.0
MS.gene60521.t1 AT3G49150 23.908 435 287 14 10 412 15 437 1.95e-16 81.6
MS.gene60521.t1 AT5G56810 26.730 419 258 13 11 411 15 402 2.36e-16 81.3
MS.gene60521.t1 AT1G16930 25.740 439 267 16 5 416 9 415 4.85e-16 80.5
MS.gene60521.t1 AT1G16930 25.740 439 267 16 5 416 9 415 4.85e-16 80.5
MS.gene60521.t1 AT1G16930 25.740 439 267 16 5 416 9 415 4.85e-16 80.5
MS.gene60521.t1 AT5G22660 25.995 427 267 15 10 411 12 414 7.51e-16 80.1
MS.gene60521.t1 AT5G44490 26.514 479 278 20 7 444 13 458 7.74e-16 80.1
MS.gene60521.t1 AT1G06630 29.888 358 219 13 10 351 11 352 8.76e-16 79.0
MS.gene60521.t1 AT1G06630 29.888 358 219 13 10 351 11 352 8.76e-16 79.0
MS.gene60521.t1 AT5G44490 26.711 453 265 19 7 425 13 432 1.23e-15 79.3
MS.gene60521.t1 AT4G22280 29.558 362 226 11 10 362 1 342 1.30e-15 79.0
MS.gene60521.t1 AT3G03030 25.000 376 233 11 11 351 2 363 1.42e-15 79.3
MS.gene60521.t1 AT5G56820 26.218 431 231 18 11 411 15 388 1.43e-15 79.0
MS.gene60521.t1 AT1G06630 29.805 359 218 14 10 351 11 352 1.44e-15 78.6
MS.gene60521.t1 AT1G06630 29.805 359 218 14 10 351 11 352 1.44e-15 78.6
MS.gene60521.t1 AT1G06630 29.805 359 218 14 10 351 11 352 1.44e-15 78.6
MS.gene60521.t1 AT1G06630 29.805 359 218 14 10 351 11 352 1.44e-15 78.6
MS.gene60521.t1 AT1G06630 29.805 359 218 14 10 351 20 361 1.82e-15 78.6
MS.gene60521.t1 AT3G51530 26.995 426 264 16 10 421 29 421 1.82e-15 79.0
MS.gene60521.t1 AT5G56390 26.540 422 262 15 11 413 2 394 2.02e-15 78.6
MS.gene60521.t1 AT1G06630 29.805 359 218 14 10 351 11 352 2.03e-15 78.6
MS.gene60521.t1 AT5G56690 27.098 417 265 15 13 411 4 399 2.18e-15 78.2
MS.gene60521.t1 AT4G22280 30.199 351 216 11 10 351 1 331 3.77e-15 76.6
MS.gene60521.t1 AT1G13780 25.635 433 266 17 11 409 10 420 3.81e-15 77.8
MS.gene60521.t1 AT2G26030 25.296 423 272 12 11 409 4 406 5.37e-15 77.4
MS.gene60521.t1 AT2G26030 25.296 423 272 12 11 409 4 406 5.37e-15 77.4
MS.gene60521.t1 AT2G29930 29.121 364 210 16 10 351 11 348 6.04e-15 77.0
MS.gene60521.t1 AT2G29930 29.121 364 210 16 10 351 11 348 6.04e-15 77.0
MS.gene60521.t1 AT3G26920 26.761 355 217 15 93 429 4 333 8.45e-15 75.9
MS.gene60521.t1 AT3G26920 26.761 355 217 15 93 429 4 333 8.45e-15 75.9
MS.gene60521.t1 AT3G58980 25.635 433 276 15 10 413 1 416 9.10e-15 77.0
MS.gene60521.t1 AT4G15060 25.882 425 240 19 8 395 23 409 1.11e-14 76.3
MS.gene60521.t1 AT3G59000 24.215 446 274 15 11 413 2 426 1.44e-14 76.3
MS.gene60521.t1 AT3G58920 25.926 378 230 12 11 351 2 366 1.71e-14 75.9
MS.gene60521.t1 AT3G58900 25.446 448 265 16 11 413 2 425 1.96e-14 75.5
MS.gene60521.t1 AT3G44060 27.920 351 219 16 16 350 4 336 1.97e-14 75.5
MS.gene60521.t1 AT1G05080 28.009 432 246 16 10 411 12 408 2.93e-14 75.1
MS.gene60521.t1 AT5G22670 25.891 421 267 14 10 408 10 407 2.97e-14 75.1
MS.gene60521.t1 AT1G69630 25.835 449 274 19 8 426 15 434 2.98e-14 75.1
MS.gene60521.t1 AT5G18770 26.648 364 228 12 4 346 17 362 3.18e-14 74.3
MS.gene60521.t1 AT3G52680 29.640 361 198 14 9 350 19 342 4.00e-14 73.9
MS.gene60521.t1 AT5G41630 25.255 392 229 13 5 351 6 378 4.80e-14 74.3
MS.gene60521.t1 AT3G42770 29.642 307 175 12 16 299 4 292 6.10e-14 74.3
MS.gene60521.t1 AT1G66310 26.096 456 276 17 5 432 13 435 6.23e-14 73.9
MS.gene60521.t1 AT2G26030 25.234 428 271 13 11 409 4 411 7.79e-14 73.6
MS.gene60521.t1 AT1G66290 26.196 439 260 20 8 418 26 428 8.92e-14 73.6
MS.gene60521.t1 AT3G56780 24.550 444 279 12 13 412 9 440 1.06e-13 73.6
MS.gene60521.t1 AT5G56560 26.389 432 259 19 8 418 2 395 1.51e-13 72.8
MS.gene60521.t1 AT5G18780 26.111 360 225 14 10 350 10 347 1.56e-13 72.4
MS.gene60521.t1 AT5G18780 26.111 360 225 14 10 350 10 347 1.56e-13 72.4
MS.gene60521.t1 AT5G56700 28.613 346 216 13 77 413 29 352 2.20e-13 71.6
MS.gene60521.t1 AT1G66320 24.419 430 271 15 7 411 26 426 2.25e-13 72.4
MS.gene60521.t1 AT3G59240 26.648 364 230 13 10 352 7 354 2.40e-13 72.4
MS.gene60521.t1 AT3G49030 26.024 415 244 16 10 413 20 382 2.60e-13 72.0
MS.gene60521.t1 AT3G03030 36.364 143 80 3 11 143 2 143 2.63e-13 71.2
MS.gene60521.t1 AT5G27750 24.934 381 232 11 11 354 5 368 4.97e-13 70.9
MS.gene60521.t1 AT1G55030 25.000 404 273 14 11 409 9 387 7.77e-13 70.5
MS.gene60521.t1 AT4G10410 27.108 332 155 12 25 349 1 252 7.94e-13 68.9
MS.gene60521.t1 AT3G58880 25.729 377 223 11 11 354 3 355 7.97e-13 70.5
MS.gene60521.t1 AT5G22730 26.558 369 223 15 10 350 27 375 8.38e-13 70.1
MS.gene60521.t1 AT1G55030 25.000 404 273 14 11 409 19 397 9.46e-13 70.1
MS.gene60521.t1 AT3G58930 24.675 385 229 11 11 351 2 369 1.05e-12 70.5
MS.gene60521.t1 AT3G58930 24.675 385 229 11 11 351 2 369 1.05e-12 70.5
MS.gene60521.t1 AT3G58930 24.675 385 229 11 11 351 2 369 1.05e-12 70.5
MS.gene60521.t1 AT4G15060 27.215 316 179 15 9 298 170 460 1.17e-12 70.5
MS.gene60521.t1 AT4G03220 23.714 447 289 15 11 411 24 464 1.35e-12 70.1
MS.gene60521.t1 AT5G22720 24.711 433 269 14 10 409 22 430 1.39e-12 69.7
MS.gene60521.t1 AT1G66300 25.821 457 268 18 11 432 29 449 1.65e-12 69.7
MS.gene60521.t1 AT2G29910 25.806 372 218 13 6 339 24 375 1.66e-12 69.3
MS.gene60521.t1 AT2G29910 25.815 368 215 13 10 339 4 351 1.78e-12 68.9
MS.gene60521.t1 AT2G29910 25.815 368 215 13 10 339 4 351 1.78e-12 68.9
MS.gene60521.t1 AT2G29910 25.815 368 215 13 10 339 4 351 1.78e-12 68.9
MS.gene60521.t1 AT2G29910 25.815 368 215 13 10 339 4 351 1.78e-12 68.9
MS.gene60521.t1 AT3G26922 27.740 292 190 10 9 295 12 287 1.93e-12 68.2
MS.gene60521.t1 AT3G26922 27.740 292 190 10 9 295 12 287 1.93e-12 68.2
MS.gene60521.t1 AT1G60400 26.027 365 243 12 11 363 14 363 4.61e-12 68.2
MS.gene60521.t1 AT5G15620 25.833 360 231 11 10 351 1 342 4.79e-12 68.2
MS.gene60521.t1 AT3G49480 25.986 431 271 15 10 417 11 416 5.33e-12 68.2
MS.gene60521.t1 AT2G29910 26.453 344 204 11 10 322 4 329 6.80e-12 67.0
MS.gene60521.t1 AT2G29910 26.453 344 204 11 10 322 4 329 6.80e-12 67.0
MS.gene60521.t1 AT5G38392 33.495 206 112 6 11 200 2 198 7.24e-12 65.1
MS.gene60521.t1 AT3G60040 27.056 377 216 15 10 351 12 364 1.31e-11 67.0
MS.gene60521.t1 AT3G60040 27.056 377 216 15 10 351 229 581 1.35e-11 67.0
MS.gene60521.t1 AT1G78750 24.512 461 272 18 11 429 18 444 1.39e-11 66.6
MS.gene60521.t1 AT1G78750 24.512 461 272 18 11 429 18 444 1.39e-11 66.6
MS.gene60521.t1 AT4G13985 26.431 367 225 15 11 350 19 367 1.42e-11 66.6
MS.gene60521.t1 AT3G60040 27.056 377 216 15 10 351 231 583 1.49e-11 67.0
MS.gene60521.t1 AT1G80470 24.018 433 265 20 9 411 13 411 1.65e-11 66.6
MS.gene60521.t1 AT5G56810 29.249 253 144 9 11 247 15 248 1.80e-11 65.5
MS.gene60521.t1 AT3G60040 27.056 377 216 15 10 351 232 584 1.89e-11 67.0
MS.gene60521.t1 AT3G60040 27.056 377 216 15 10 351 231 583 1.97e-11 67.0
MS.gene60521.t1 AT1G26890 24.029 412 256 14 9 392 36 418 3.57e-11 65.5
MS.gene60521.t1 AT5G22700 26.585 410 237 15 11 408 43 400 3.83e-11 65.1
MS.gene60521.t1 AT5G56570 23.981 417 278 14 8 418 33 416 3.90e-11 65.1
MS.gene60521.t1 AT3G49020 25.058 431 286 16 9 430 20 422 5.63e-11 64.7
MS.gene60521.t1 AT5G50270 28.340 247 159 9 11 249 2 238 9.61e-11 63.2

Find 90 sgRNAs with CRISPR-Local

Find 115 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCACAATTTATCATCTTTA+TGG 0.083639 1.2:+68415320 MS.gene60521:CDS
TCTACTGGTTTGTTTGAATT+TGG 0.121921 1.2:-68416132 None:intergenic
ACAAATCCTCCGTCCTAGTA+TGG 0.244750 1.2:+68416178 MS.gene60521:CDS
CTCATTACATTTGAATTTAG+AGG 0.246327 1.2:+68416024 MS.gene60521:CDS
CAAGGTTGAGGAACTTGAAT+TGG 0.292646 1.2:+68414619 MS.gene60521:CDS
TAGAGTTGAACACAATAAAT+TGG 0.294013 1.2:-68414790 None:intergenic
AAGAGGTTGAAAACAAAGTT+TGG 0.294970 1.2:+68415962 MS.gene60521:CDS
TCACAATTTATCATCTTTAT+GGG 0.300522 1.2:+68415321 MS.gene60521:CDS
TTGAACGATTTATAATATAT+CGG 0.310061 1.2:-68416080 None:intergenic
ATCTTGATCTTCATCATATT+CGG 0.316763 1.2:-68414303 None:intergenic
ATGGCAAGATCCCTAAGTTT+TGG 0.321820 1.2:-68415400 None:intergenic
AAGTTAATATCTGGAGCAAT+AGG 0.345584 1.2:-68416329 None:intergenic
AAAGTCAAGGTTGGGGATCT+TGG 0.348543 1.2:-68414435 None:intergenic
GGTAATTCAAAGTCAAGGTT+GGG 0.367483 1.2:-68414443 None:intergenic
TAAAAGACATGTCGGAGTTT+CGG 0.370169 1.2:-68415995 None:intergenic
AGTTTGTATTCACTCTTAAG+AGG 0.386556 1.2:+68415124 MS.gene60521:CDS
TCAAGTAAGCTTCTTTCTAC+TGG 0.389300 1.2:-68416147 None:intergenic
AGCCTAAGGGGCAATAAGAT+TGG 0.402731 1.2:-68414662 None:intergenic
TTTACATGACTGCATGAAAC+AGG 0.406869 1.2:+68414883 MS.gene60521:CDS
AAATATCCGAAAATTGTTGT+TGG 0.407540 1.2:+68415347 MS.gene60521:CDS
AGTTAATATCTGGAGCAATA+GGG 0.421254 1.2:-68416328 None:intergenic
GACATAGGGTCTGTAGTCTT+TGG 0.423895 1.2:-68414464 None:intergenic
ACCATATGATATGCATTTGT+GGG 0.426131 1.2:+68414577 MS.gene60521:CDS
AAGAGTAGCTCGATTGAGAT+TGG 0.434112 1.2:-68415074 None:intergenic
GACCACGAGCGACTTAGAAA+TGG 0.441343 1.2:-68414687 None:intergenic
TGATGGTCAAAGTTAATATC+TGG 0.443718 1.2:-68416338 None:intergenic
TACAGAATGCTCCAAAACTT+AGG 0.453885 1.2:+68415389 MS.gene60521:CDS
GGAGAGCTGCATATACAGAT+TGG 0.456055 1.2:-68414499 None:intergenic
ACAGAATGCTCCAAAACTTA+GGG 0.466812 1.2:+68415390 MS.gene60521:CDS
TGAACGATTTATAATATATC+GGG 0.470435 1.2:-68416079 None:intergenic
ACCCACAAATGCATATCATA+TGG 0.471485 1.2:-68414578 None:intergenic
CACCATATGATATGCATTTG+TGG 0.477852 1.2:+68414576 MS.gene60521:CDS
CTCTAAATTCAAATGTAATG+AGG 0.480583 1.2:-68416023 None:intergenic
AGGAACTTGAATTGGATTGT+TGG 0.484585 1.2:+68414627 MS.gene60521:CDS
AGAGGTTGAAAACAAAGTTT+GGG 0.485976 1.2:+68415963 MS.gene60521:CDS
GTAGAAAGAAGCTTACTTGA+GGG 0.493554 1.2:+68416150 MS.gene60521:CDS
ACTTAGGGATCTTGCCATTG+AGG 0.495226 1.2:+68415405 MS.gene60521:CDS
TGGTAATTCAAAGTCAAGGT+TGG 0.495646 1.2:-68414444 None:intergenic
AATTTGCACTGGACAAATGT+TGG 0.499634 1.2:-68414975 None:intergenic
AATGAATACTCTCTTTAATG+AGG 0.503823 1.2:-68414927 None:intergenic
GGATTGCTTTGAACGACATA+GGG 0.506791 1.2:-68414478 None:intergenic
CAAATGTTGGACTCAACAAA+AGG 0.508165 1.2:-68414962 None:intergenic
TGGATTGCTTTGAACGACAT+AGG 0.509111 1.2:-68414479 None:intergenic
ACTTAGAAATGGAAAGCCTA+AGG 0.512993 1.2:-68414676 None:intergenic
TACGAAGAACTTCAAGTGAT+GGG 0.516752 1.2:-68415003 None:intergenic
AACCAATCTTATTGCCCCTT+AGG 0.520921 1.2:+68414660 MS.gene60521:CDS
TCGTTCAAGTAATTTGAAGA+AGG 0.521522 1.2:+68416095 MS.gene60521:CDS
TTGTAGATAGAACACTTGTT+CGG 0.523361 1.2:-68414394 None:intergenic
TCAAAACGTACAAACTGAGT+TGG 0.523905 1.2:+68416050 MS.gene60521:CDS
GATGGGGCATTAATTTGCAC+TGG 0.524036 1.2:-68414986 None:intergenic
CAAGTGTTCTATCTACAAGA+TGG 0.524434 1.2:+68414399 MS.gene60521:CDS
ATCTCGTTGTCGACATCTTG+AGG 0.524833 1.2:+68414853 MS.gene60521:CDS
TGAACACAATAAATTGGAGC+TGG 0.528466 1.2:-68414784 None:intergenic
AGCATTAGACCTCAAGGTTG+AGG 0.528928 1.2:+68414607 MS.gene60521:CDS
TTCAAAAGCATTAGACCTCA+AGG 0.530430 1.2:+68414601 MS.gene60521:CDS
CCGAAAACTTAAGAAAACTA+AGG 0.530981 1.2:+68414531 MS.gene60521:CDS
TCTTCGCATTTCTAAGCATG+TGG 0.534563 1.2:+68415093 MS.gene60521:CDS
GTTAATATCTGGAGCAATAG+GGG 0.538194 1.2:-68416327 None:intergenic
AATATTCATACACACCTCAA+TGG 0.541265 1.2:-68415419 None:intergenic
CAAATCCTCCGTCCTAGTAT+GGG 0.545746 1.2:+68416179 MS.gene60521:CDS
GTAATTCAAAGTCAAGGTTG+GGG 0.549481 1.2:-68414442 None:intergenic
GTAAACTTCATACCCATACT+AGG 0.555747 1.2:-68416191 None:intergenic
CTTAGAAATGGAAAGCCTAA+GGG 0.556919 1.2:-68414675 None:intergenic
TTCCATTTCTAAGTCGCTCG+TGG 0.557905 1.2:+68414685 MS.gene60521:CDS
CTAAGGCTCTATAGTGACAA+TGG 0.568620 1.2:+68414548 MS.gene60521:CDS
ATGAATACTCTCTTTAATGA+GGG 0.572741 1.2:-68414926 None:intergenic
CAATAAGATTGGTTTCTCGA+TGG 0.573973 1.2:-68414651 None:intergenic
AAGTGTTCTATCTACAAGAT+GGG 0.574630 1.2:+68414400 MS.gene60521:CDS
AGCTGGAGAATCTTTAGTGA+CGG 0.576222 1.2:-68414767 None:intergenic
TATTGTGTTCAACTCTATCG+TGG 0.590909 1.2:+68414796 MS.gene60521:CDS
ATACGAAGAACTTCAAGTGA+TGG 0.594324 1.2:-68415004 None:intergenic
ATTCAAGTTCCTCAACCTTG+AGG 0.595725 1.2:-68414616 None:intergenic
TATTTGTTAGTATGATGTGT+GGG 0.597464 1.2:+68416282 MS.gene60521:intron
TCTTTGGTAATTCAAAGTCA+AGG 0.608733 1.2:-68414448 None:intergenic
TCTGGAGCAATAGGGGAGGG+TGG 0.609458 1.2:-68416320 None:intergenic
GGTTGAAAACAAAGTTTGGG+TGG 0.610776 1.2:+68415966 MS.gene60521:CDS
AGACATGTCGGAGTTTCGGA+TGG 0.620789 1.2:-68415991 None:intergenic
CTCGTGGTCTTAAAATTGCG+AGG 0.624870 1.2:+68414701 MS.gene60521:CDS
AGTAGAAAGAAGCTTACTTG+AGG 0.634399 1.2:+68416149 MS.gene60521:CDS
AGGTTGTTTAAAAGACATGT+CGG 0.638005 1.2:-68416003 None:intergenic
TGTTAGTATGATGTGTGGGA+TGG 0.639262 1.2:+68416286 MS.gene60521:intron
ATATTTGTTAGTATGATGTG+TGG 0.644090 1.2:+68416281 MS.gene60521:intron
TCATACCCATACTAGGACGG+AGG 0.647717 1.2:-68416184 None:intergenic
TAGAAAGAAGCTTACTTGAG+GGG 0.654250 1.2:+68416151 MS.gene60521:CDS
ACTTCATACCCATACTAGGA+CGG 0.656309 1.2:-68416187 None:intergenic
TTAGAAATGGAAAGCCTAAG+GGG 0.656773 1.2:-68414674 None:intergenic
ACGAAGAACTTCAAGTGATG+GGG 0.661138 1.2:-68415002 None:intergenic
AATATCTGGAGCAATAGGGG+AGG 0.666143 1.2:-68416324 None:intergenic
TATGCAGTTTCTAAGCATGG+AGG 0.674218 1.2:+68415267 MS.gene60521:intron
ATATCTGGAGCAATAGGGGA+GGG 0.678434 1.2:-68416323 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTTTTTTTTTTTTA+TGG - chr1.2:68415535-68415554 None:intergenic 0.0%
!! CAAAAAAAAAAAAAAAAACA+TGG - chr1.2:68415801-68415820 None:intergenic 10.0%
!! TAATGAAAAGTTATAATAAA+TGG + chr1.2:68415730-68415749 MS.gene60521:intron 10.0%
!!! ATATAGTTTTAATTGTATAT+CGG - chr1.2:68415613-68415632 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTATGGTT+GGG - chr1.2:68415530-68415549 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTTATGGT+TGG - chr1.2:68415531-68415550 None:intergenic 10.0%
!! ATAAAAAACTAACAAAAACA+TGG - chr1.2:68415837-68415856 None:intergenic 15.0%
!! GTATATAAATTCAAGTATTA+AGG - chr1.2:68416229-68416248 None:intergenic 15.0%
!! TTGAACGATTTATAATATAT+CGG - chr1.2:68416083-68416102 None:intergenic 15.0%
!! TTTGCACAATTTAAAAAAAA+TGG + chr1.2:68415452-68415471 MS.gene60521:intron 15.0%
!!! TTTGTAAACTTATATTTTCT+GGG - chr1.2:68415049-68415068 None:intergenic 15.0%
!!! TTTTTTTTTTTTTATGGTTG+GGG - chr1.2:68415529-68415548 None:intergenic 15.0%
!! TCACAATTTATCATCTTTAT+GGG + chr1.2:68415321-68415340 MS.gene60521:CDS 20.0%
!! TGAACGATTTATAATATATC+GGG - chr1.2:68416082-68416101 None:intergenic 20.0%
!! TGCATATGAGTAAATAAATA+TGG - chr1.2:68415236-68415255 None:intergenic 20.0%
!! TTAATTACTACTACAAGTAT+AGG - chr1.2:68415640-68415659 None:intergenic 20.0%
!! TTCACAATTTATCATCTTTA+TGG + chr1.2:68415320-68415339 MS.gene60521:CDS 20.0%
!!! GTTTGTAAACTTATATTTTC+TGG - chr1.2:68415050-68415069 None:intergenic 20.0%
! AAATATCCGAAAATTGTTGT+TGG + chr1.2:68415347-68415366 MS.gene60521:CDS 25.0%
! AAGATAGAGCAAAAGATATT+TGG + chr1.2:68415572-68415591 MS.gene60521:intron 25.0%
! AATGAATACTCTCTTTAATG+AGG - chr1.2:68414930-68414949 None:intergenic 25.0%
! ATCATAGATAGTCTATATGA+CGG - chr1.2:68415674-68415693 None:intergenic 25.0%
! ATCTTGATCTTCATCATATT+CGG - chr1.2:68414306-68414325 None:intergenic 25.0%
! ATGAATACTCTCTTTAATGA+GGG - chr1.2:68414929-68414948 None:intergenic 25.0%
! CTCATTACATTTGAATTTAG+AGG + chr1.2:68416024-68416043 MS.gene60521:CDS 25.0%
! CTCTAAATTCAAATGTAATG+AGG - chr1.2:68416026-68416045 None:intergenic 25.0%
! GTAAACGATACCAAATATTA+TGG - chr1.2:68415920-68415939 None:intergenic 25.0%
! TAGAGTTGAACACAATAAAT+TGG - chr1.2:68414793-68414812 None:intergenic 25.0%
!! ATATTTGTTAGTATGATGTG+TGG + chr1.2:68416281-68416300 MS.gene60521:intron 25.0%
!! GAAGTTCTAACCATAATATT+TGG + chr1.2:68415907-68415926 MS.gene60521:intron 25.0%
!! TATTTGTTAGTATGATGTGT+GGG + chr1.2:68416282-68416301 MS.gene60521:intron 25.0%
!!! CCTTAGTTTTCTTAAGTTTT+CGG - chr1.2:68414534-68414553 None:intergenic 25.0%
AAGAGGTTGAAAACAAAGTT+TGG + chr1.2:68415962-68415981 MS.gene60521:CDS 30.0%
AAGTGTTCTATCTACAAGAT+GGG + chr1.2:68414400-68414419 MS.gene60521:CDS 30.0%
AATATTCATACACACCTCAA+TGG - chr1.2:68415422-68415441 None:intergenic 30.0%
ACCATATGATATGCATTTGT+GGG + chr1.2:68414577-68414596 MS.gene60521:CDS 30.0%
AGAGGTTGAAAACAAAGTTT+GGG + chr1.2:68415963-68415982 MS.gene60521:CDS 30.0%
AGGTTGTTTAAAAGACATGT+CGG - chr1.2:68416006-68416025 None:intergenic 30.0%
AGTTTGTATTCACTCTTAAG+AGG + chr1.2:68415124-68415143 MS.gene60521:CDS 30.0%
CCGAAAACTTAAGAAAACTA+AGG + chr1.2:68414531-68414550 MS.gene60521:CDS 30.0%
TCGTTCAAGTAATTTGAAGA+AGG + chr1.2:68416095-68416114 MS.gene60521:CDS 30.0%
TTGTAGATAGAACACTTGTT+CGG - chr1.2:68414397-68414416 None:intergenic 30.0%
TTTATGAACGAGAGAATTGT+TGG + chr1.2:68416251-68416270 MS.gene60521:intron 30.0%
! CACATTCCAACAACAATTTT+CGG - chr1.2:68415356-68415375 None:intergenic 30.0%
! GAAAAAATTTGAAACCGAAG+AGG + chr1.2:68415945-68415964 MS.gene60521:intron 30.0%
! TCTTTGGTAATTCAAAGTCA+AGG - chr1.2:68414451-68414470 None:intergenic 30.0%
! TTTTATGCAGTTTCTAAGCA+TGG + chr1.2:68415264-68415283 MS.gene60521:intron 30.0%
!! TCTACTGGTTTGTTTGAATT+TGG - chr1.2:68416135-68416154 None:intergenic 30.0%
!!! AACTTTGTTTTCAACCTCTT+CGG - chr1.2:68415962-68415981 None:intergenic 30.0%
AATTTGCACTGGACAAATGT+TGG - chr1.2:68414978-68414997 None:intergenic 35.0%
ACAGAATGCTCCAAAACTTA+GGG + chr1.2:68415390-68415409 MS.gene60521:CDS 35.0%
ACCCACAAATGCATATCATA+TGG - chr1.2:68414581-68414600 None:intergenic 35.0%
ACTTAGAAATGGAAAGCCTA+AGG - chr1.2:68414679-68414698 None:intergenic 35.0%
AGGAACTTGAATTGGATTGT+TGG + chr1.2:68414627-68414646 MS.gene60521:CDS 35.0%
AGTAGAAAGAAGCTTACTTG+AGG + chr1.2:68416149-68416168 MS.gene60521:CDS 35.0%
ATACGAAGAACTTCAAGTGA+TGG - chr1.2:68415007-68415026 None:intergenic 35.0%
CAAATGTTGGACTCAACAAA+AGG - chr1.2:68414965-68414984 None:intergenic 35.0%
CAAGTGTTCTATCTACAAGA+TGG + chr1.2:68414399-68414418 MS.gene60521:CDS 35.0%
CACCATATGATATGCATTTG+TGG + chr1.2:68414576-68414595 MS.gene60521:CDS 35.0%
CTTAGAAATGGAAAGCCTAA+GGG - chr1.2:68414678-68414697 None:intergenic 35.0%
GCTTCGTGTATTGTTTACAT+GGG - chr1.2:68415863-68415882 None:intergenic 35.0%
GGTAATTCAAAGTCAAGGTT+GGG - chr1.2:68414446-68414465 None:intergenic 35.0%
GTAAACTTCATACCCATACT+AGG - chr1.2:68416194-68416213 None:intergenic 35.0%
GTAATTCAAAGTCAAGGTTG+GGG - chr1.2:68414445-68414464 None:intergenic 35.0%
GTAGAAAGAAGCTTACTTGA+GGG + chr1.2:68416150-68416169 MS.gene60521:CDS 35.0%
TAAAAGACATGTCGGAGTTT+CGG - chr1.2:68415998-68416017 None:intergenic 35.0%
TACAGAATGCTCCAAAACTT+AGG + chr1.2:68415389-68415408 MS.gene60521:CDS 35.0%
TACGAAGAACTTCAAGTGAT+GGG - chr1.2:68415006-68415025 None:intergenic 35.0%
TAGAAAGAAGCTTACTTGAG+GGG + chr1.2:68416151-68416170 MS.gene60521:CDS 35.0%
TATTGTGTTCAACTCTATCG+TGG + chr1.2:68414796-68414815 MS.gene60521:CDS 35.0%
TCAAAACGTACAAACTGAGT+TGG + chr1.2:68416050-68416069 MS.gene60521:CDS 35.0%
TCAAGTAAGCTTCTTTCTAC+TGG - chr1.2:68416150-68416169 None:intergenic 35.0%
TGAACACAATAAATTGGAGC+TGG - chr1.2:68414787-68414806 None:intergenic 35.0%
TGCTTCGTGTATTGTTTACA+TGG - chr1.2:68415864-68415883 None:intergenic 35.0%
TGGTAATTCAAAGTCAAGGT+TGG - chr1.2:68414447-68414466 None:intergenic 35.0%
TTAGAAATGGAAAGCCTAAG+GGG - chr1.2:68414677-68414696 None:intergenic 35.0%
TTTACATGACTGCATGAAAC+AGG + chr1.2:68414883-68414902 MS.gene60521:CDS 35.0%
!! CAATAAGATTGGTTTCTCGA+TGG - chr1.2:68414654-68414673 None:intergenic 35.0%
!! TTCAAAAGCATTAGACCTCA+AGG + chr1.2:68414601-68414620 MS.gene60521:CDS 35.0%
AACCAATCTTATTGCCCCTT+AGG + chr1.2:68414660-68414679 MS.gene60521:CDS 40.0%
AAGAGTAGCTCGATTGAGAT+TGG - chr1.2:68415077-68415096 None:intergenic 40.0%
AATCTATCACAAGACGTTCG+AGG + chr1.2:68415497-68415516 MS.gene60521:intron 40.0%
ACGAAGAACTTCAAGTGATG+GGG - chr1.2:68415005-68415024 None:intergenic 40.0%
ACTTCATACCCATACTAGGA+CGG - chr1.2:68416190-68416209 None:intergenic 40.0%
AGCTGGAGAATCTTTAGTGA+CGG - chr1.2:68414770-68414789 None:intergenic 40.0%
CAAGGTTGAGGAACTTGAAT+TGG + chr1.2:68414619-68414638 MS.gene60521:CDS 40.0%
CTAAGGCTCTATAGTGACAA+TGG + chr1.2:68414548-68414567 MS.gene60521:CDS 40.0%
GGTTGAAAACAAAGTTTGGG+TGG + chr1.2:68415966-68415985 MS.gene60521:CDS 40.0%
TATGCAGTTTCTAAGCATGG+AGG + chr1.2:68415267-68415286 MS.gene60521:intron 40.0%
TCTTCGCATTTCTAAGCATG+TGG + chr1.2:68415093-68415112 MS.gene60521:CDS 40.0%
TGTTAGTATGATGTGTGGGA+TGG + chr1.2:68416286-68416305 MS.gene60521:intron 40.0%
! ATGGCAAGATCCCTAAGTTT+TGG - chr1.2:68415403-68415422 None:intergenic 40.0%
! ATTCAAGTTCCTCAACCTTG+AGG - chr1.2:68414619-68414638 None:intergenic 40.0%
! GGATTGCTTTGAACGACATA+GGG - chr1.2:68414481-68414500 None:intergenic 40.0%
! TGGATTGCTTTGAACGACAT+AGG - chr1.2:68414482-68414501 None:intergenic 40.0%
!! GGTAAGACTCTTTTGTTGTC+AGG - chr1.2:68414376-68414395 None:intergenic 40.0%
!! TTAAGTTTTCGGTGCGTCTT+AGG - chr1.2:68414523-68414542 None:intergenic 40.0%
AAAGTCAAGGTTGGGGATCT+TGG - chr1.2:68414438-68414457 None:intergenic 45.0%
ACAAATCCTCCGTCCTAGTA+TGG + chr1.2:68416178-68416197 MS.gene60521:CDS 45.0%
ACTTAGGGATCTTGCCATTG+AGG + chr1.2:68415405-68415424 MS.gene60521:CDS 45.0%
AGCATTAGACCTCAAGGTTG+AGG + chr1.2:68414607-68414626 MS.gene60521:CDS 45.0%
AGCCTAAGGGGCAATAAGAT+TGG - chr1.2:68414665-68414684 None:intergenic 45.0%
ATCTCGTTGTCGACATCTTG+AGG + chr1.2:68414853-68414872 MS.gene60521:CDS 45.0%
CAAATCCTCCGTCCTAGTAT+GGG + chr1.2:68416179-68416198 MS.gene60521:CDS 45.0%
GACATAGGGTCTGTAGTCTT+TGG - chr1.2:68414467-68414486 None:intergenic 45.0%
GGAGAGCTGCATATACAGAT+TGG - chr1.2:68414502-68414521 None:intergenic 45.0%
TTCCATTTCTAAGTCGCTCG+TGG + chr1.2:68414685-68414704 MS.gene60521:CDS 45.0%
! AATATCTGGAGCAATAGGGG+AGG - chr1.2:68416327-68416346 None:intergenic 45.0%
! ATATCTGGAGCAATAGGGGA+GGG - chr1.2:68416326-68416345 None:intergenic 45.0%
! CTCGTGGTCTTAAAATTGCG+AGG + chr1.2:68414701-68414720 MS.gene60521:CDS 45.0%
!! GATGGGGCATTAATTTGCAC+TGG - chr1.2:68414989-68415008 None:intergenic 45.0%
AGACATGTCGGAGTTTCGGA+TGG - chr1.2:68415994-68416013 None:intergenic 50.0%
GACCACGAGCGACTTAGAAA+TGG - chr1.2:68414690-68414709 None:intergenic 50.0%
TCATACCCATACTAGGACGG+AGG - chr1.2:68416187-68416206 None:intergenic 50.0%
! TCTGGAGCAATAGGGGAGGG+TGG - chr1.2:68416323-68416342 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 68414293 68416348 68414293 ID=MS.gene60521
chr1.2 mRNA 68414293 68416348 68414293 ID=MS.gene60521.t1;Parent=MS.gene60521
chr1.2 exon 68414293 68415192 68414293 ID=MS.gene60521.t1.exon1;Parent=MS.gene60521.t1
chr1.2 CDS 68414293 68415192 68414293 ID=cds.MS.gene60521.t1;Parent=MS.gene60521.t1
chr1.2 exon 68415274 68415426 68415274 ID=MS.gene60521.t1.exon2;Parent=MS.gene60521.t1
chr1.2 CDS 68415274 68415426 68415274 ID=cds.MS.gene60521.t1;Parent=MS.gene60521.t1
chr1.2 exon 68415946 68416200 68415946 ID=MS.gene60521.t1.exon3;Parent=MS.gene60521.t1
chr1.2 CDS 68415946 68416200 68415946 ID=cds.MS.gene60521.t1;Parent=MS.gene60521.t1
chr1.2 exon 68416292 68416348 68416292 ID=MS.gene60521.t1.exon4;Parent=MS.gene60521.t1
chr1.2 CDS 68416292 68416348 68416292 ID=cds.MS.gene60521.t1;Parent=MS.gene60521.t1
Gene Sequence

>MS.gene60521

ATGGCGTGCTCCGAATATGATGAAGATCAAGATCGATTAAGCAATCTCGAAGACGAATTGATTATTCATATTTTGTCTTTCCTGACAACAAAAGAGTCTTACCGAACAAGTGTTCTATCTACAAGATGGGAGTCGATCTGCACCAAGATCCCCAACCTTGACTTTGAATTACCAAAGACTACAGACCCTATGTCGTTCAAAGCAATCCAATCTGTATATGCAGCTCTCCTAAGACGCACCGAAAACTTAAGAAAACTAAGGCTCTATAGTGACAATGGTTGCACACCATATGATATGCATTTGTGGGTTTCAAAAGCATTAGACCTCAAGGTTGAGGAACTTGAATTGGATTGTTGGTCCATCGAGAAACCAATCTTATTGCCCCTTAGGCTTTCCATTTCTAAGTCGCTCGTGGTCTTAAAATTGCGAGGCAGAACTCAGCTAAGACTTAATTCTTCTTCTGATGTGTGTTTTCCGTCACTAAAGATTCTCCAGCTCCAATTTATTGTGTTCAACTCTATCGTGGATGATCATAGTGAGTATGATCTCGCTAATTTTCTATCTCGTTGTCGACATCTTGAGGAATTTGTTTTACATGACTGCATGAAACAGGCAATCAATATTGTTTCTTTTCCCTCATTAAAGAGAGTATTCATTTGTTTATTTATGCCTTTTGTTGAGTCCAACATTTGTCCAGTGCAAATTAATGCCCCATCACTTGAAGTTCTTCGTATTGTTGATACTTCATTTTCTCCCAGAAAATATAAGTTTACAAACTTGTCCAATCTCAATCGAGCTACTCTTCGCATTTCTAAGCATGTGGATTTTAACAGTTTGTATTCACTCTTAAGAGGACTTTCTAATGTTAAATCATTGACTATCAGTTCTGAAATTATTCATGTAAGTTTCATAATTTTTTTTATTTTTTTAATGATAAGTTCCATATTTATTTACTCATATGCAATACTTTTTTTTATGCAGTTTCTAAGCATGGAGGATAATATTGACAATCTACATCTTCTCACTTTTCACAATTTATCATCTTTATGGGTTGAAATATCCGAAAATTGTTGTTGGAATGTGCTTGTTAGCATACTACAGAATGCTCCAAAACTTAGGGATCTTGCCATTGAGGTGTGTATGAATATTCTTTACTACATTTGCACAATTTAAAAAAAATGGTAAAATATATTAATAAGCTTAAAATCTATCACAAGACGTTCGAGGTGCAAACCCCAACCATAAAAAAAAAAAAAAAAAATCTATCACATGACGTGCAAAGATAGAGCAAAAGATATTTGGAATTTGCATATAAAACCGATATACAATTAAAACTATATTTAACCTATACTTGTAGTAGTAATTAAAATTAATTTAGCCGTCATATAGACTATCTATGATCTTAAAGTGAATAGATGTTTGCATGCATGCTAGTTCTAATGAAAAGTTATAATAAATGGTTCAGTTATTATCAGTTATTTATGATAAGATGCATTTAATAATATCCATGTTTTTTTTTTTTTTTTTGAGAGAAATAATATCCATGTTTTTGTTAGTTTTTTATTTGCCCATGTAAACAATACACGAAGCAATCATGTGTCGTATATCAGTTGAGAAGTTCTAACCATAATATTTGGTATCGTTTACATGCAGAAAAAATTTGAAACCGAAGAGGTTGAAAACAAAGTTTGGGTGGAGCCATCCGAAACTCCGACATGTCTTTTAAACAACCTCATTACATTTGAATTTAGAGGAATTCAAAACGTACAAACTGAGTTGGACTTTACCCGATATATTATAAATCGTTCAAGTAATTTGAAGAAGGTAAAGATTTTCACTCCAAATTCAAACAAACCAGTAGAAAGAAGCTTACTTGAGGGGTCAAACAAATCCTCCGTCCTAGTATGGGTATGAAGTTTACACACTTTCTTTTCCTTAATACTTGAATTTATATACTTTTTATGAACGAGAGAATTGTTGGTATGTTAATATTTGTTAGTATGATGTGTGGGATGGTAATAGAACTTCCACCCTCCCCTATTGCTCCAGATATTAA

Protein sequence

>MS.gene60521.t1

MACSEYDEDQDRLSNLEDELIIHILSFLTTKESYRTSVLSTRWESICTKIPNLDFELPKTTDPMSFKAIQSVYAALLRRTENLRKLRLYSDNGCTPYDMHLWVSKALDLKVEELELDCWSIEKPILLPLRLSISKSLVVLKLRGRTQLRLNSSSDVCFPSLKILQLQFIVFNSIVDDHSEYDLANFLSRCRHLEEFVLHDCMKQAINIVSFPSLKRVFICLFMPFVESNICPVQINAPSLEVLRIVDTSFSPRKYKFTNLSNLNRATLRISKHVDFNSLYSLLRGLSNVKSLTISSEIIHFLSMEDNIDNLHLLTFHNLSSLWVEISENCCWNVLVSILQNAPKLRDLAIEKKFETEEVENKVWVEPSETPTCLLNNLITFEFRGIQNVQTELDFTRYIINRSSNLKKVKIFTPNSNKPVERSLLEGSNKSSVLVWYDVWDGNRTSTLPYCSRY