AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene050947


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050947.t1 MTR_4g056040 69.481 462 103 4 155 578 5 466 0.0 598
MS.gene050947.t1 MTR_4g056020 69.725 436 124 2 151 578 1 436 0.0 587
MS.gene050947.t1 MTR_4g056030 69.676 432 123 3 155 578 5 436 0.0 578
MS.gene050947.t1 MTR_4g055990 65.063 478 117 4 151 578 1 478 0.0 565
MS.gene050947.t1 MTR_4g055990 65.063 478 117 4 151 578 1 478 0.0 565
MS.gene050947.t1 MTR_1g038710 68.640 456 120 7 140 578 1 450 0.0 565
MS.gene050947.t1 MTR_4g055580 61.133 512 145 5 120 578 53 563 0.0 557
MS.gene050947.t1 MTR_4g056070 65.826 436 102 2 151 539 1 436 0.0 540
MS.gene050947.t1 MTR_1g090883 62.707 362 119 6 140 490 1 357 3.23e-138 406
MS.gene050947.t1 MTR_7g110920 57.703 357 92 5 242 577 1 319 2.25e-119 356
MS.gene050947.t1 MTR_4g093690 59.480 269 97 6 150 409 9 274 1.62e-87 272
MS.gene050947.t1 MTR_1g090900 67.052 173 49 2 155 319 7 179 1.71e-64 210
MS.gene050947.t1 MTR_4g056020 69.784 139 41 1 441 578 2 140 2.88e-60 197
MS.gene050947.t1 MTR_4g056010 77.551 98 22 0 213 310 3 100 8.52e-42 146
MS.gene050947.t1 MTR_1g090890 67.059 85 26 1 494 578 33 115 1.59e-29 113
MS.gene050947.t1 MTR_5g084070 30.332 422 246 14 155 559 9 399 1.13e-28 119
MS.gene050947.t1 MTR_8g445780 31.250 400 233 15 159 539 13 389 1.93e-28 117
MS.gene050947.t1 MTR_5g080710 28.894 443 265 14 136 555 6 421 1.15e-26 113
MS.gene050947.t1 MTR_3g107100 28.640 419 217 14 155 557 7 359 1.11e-25 110
MS.gene050947.t1 MTR_3g108560 29.952 414 207 20 153 554 14 356 1.71e-24 106
MS.gene050947.t1 MTR_7g056433 27.404 416 219 16 155 554 8 356 4.38e-22 99.0
MS.gene050947.t1 MTR_2g007500 29.049 389 193 15 159 531 14 335 4.51e-21 95.1
MS.gene050947.t1 MTR_2g007450 24.625 467 261 17 145 575 2 413 6.43e-21 95.9
MS.gene050947.t1 MTR_1g053025 25.727 447 238 14 159 576 2 383 2.71e-20 93.6
MS.gene050947.t1 MTR_4g032730 27.451 459 247 18 152 554 8 436 3.10e-20 94.4
MS.gene050947.t1 MTR_3g048290 27.378 431 265 14 155 554 19 432 1.13e-19 92.8
MS.gene050947.t1 MTR_7g115270 27.381 420 219 16 159 554 12 369 1.24e-19 91.7
MS.gene050947.t1 MTR_1g041245 26.341 410 222 14 159 554 11 354 1.48e-19 91.3
MS.gene050947.t1 MTR_8g062270 29.330 433 245 20 159 554 16 424 8.54e-19 89.7
MS.gene050947.t1 MTR_2g007400 24.672 458 239 19 159 579 12 400 3.89e-18 87.4
MS.gene050947.t1 MTR_8g014260 27.674 430 260 15 156 556 13 420 6.13e-18 87.0
MS.gene050947.t1 MTR_7g033915 25.178 421 220 13 159 568 11 347 2.56e-17 84.3
MS.gene050947.t1 MTR_3g082890 25.195 512 295 18 71 554 3 454 3.27e-17 85.1
MS.gene050947.t1 MTR_3g107120 27.123 424 219 15 156 554 6 364 3.62e-17 84.3
MS.gene050947.t1 MTR_8g058970 26.457 446 264 16 155 554 15 442 1.14e-16 83.2
MS.gene050947.t1 MTR_4g039440 27.685 419 218 18 153 554 26 376 1.67e-16 82.4
MS.gene050947.t1 MTR_0543s0010 30.882 272 150 10 90 342 12 264 2.13e-16 82.4
MS.gene050947.t1 MTR_0492s0020 30.882 272 150 10 90 342 12 264 2.38e-16 82.0
MS.gene050947.t1 MTR_8g468840 27.315 432 255 17 158 554 13 420 2.48e-16 82.0
MS.gene050947.t1 MTR_5g039950 27.470 415 232 16 159 554 23 387 3.19e-16 81.6
MS.gene050947.t1 MTR_4g050930 27.134 328 210 9 156 465 26 342 5.55e-16 80.5
MS.gene050947.t1 MTR_2g083840 28.372 430 246 17 159 554 21 422 6.37e-16 80.9
MS.gene050947.t1 MTR_5g045170 32.178 202 89 8 161 336 16 195 1.11e-15 79.7
MS.gene050947.t1 MTR_3g108560 35.204 196 108 10 153 341 14 197 1.63e-15 78.2
MS.gene050947.t1 MTR_4g050930 27.217 327 209 9 157 465 27 342 1.84e-15 79.7
MS.gene050947.t1 MTR_8g467800 29.087 416 249 16 155 543 16 412 2.21e-15 79.3
MS.gene050947.t1 MTR_1g085120 24.884 430 230 16 159 566 92 450 5.16e-15 78.2
MS.gene050947.t1 MTR_1g085120 24.884 430 230 16 159 566 167 525 5.26e-15 78.6
MS.gene050947.t1 MTR_8g058965 26.667 450 270 16 140 555 1 424 5.73e-15 77.8
MS.gene050947.t1 MTR_8g014160 27.083 432 215 17 152 554 33 393 1.09e-14 77.0
MS.gene050947.t1 MTR_2g008320 24.829 439 246 15 159 579 52 424 1.32e-14 76.6
MS.gene050947.t1 MTR_5g058100 25.754 431 217 15 145 554 2 350 1.72e-14 75.9
MS.gene050947.t1 MTR_2g036470 25.935 428 227 18 159 564 14 373 1.77e-14 75.9
MS.gene050947.t1 MTR_4g080787 26.531 441 251 19 159 554 19 431 2.03e-14 76.3
MS.gene050947.t1 MTR_4g092430 25.065 383 256 10 138 500 22 393 2.94e-14 75.9
MS.gene050947.t1 MTR_8g468810 27.230 426 258 18 159 554 25 428 3.06e-14 75.5
MS.gene050947.t1 MTR_3g109982 27.273 462 248 17 159 559 13 447 4.51e-14 75.9
MS.gene050947.t1 MTR_7g026500 24.941 425 218 16 158 554 13 364 5.13e-14 74.7
MS.gene050947.t1 MTR_5g045510 32.984 191 104 9 159 336 12 191 6.57e-14 73.9
MS.gene050947.t1 MTR_7g007080 32.110 218 107 10 157 349 2 203 7.92e-14 73.9
MS.gene050947.t1 MTR_4g045900 25.532 470 275 15 159 561 26 487 8.74e-14 74.3
MS.gene050947.t1 MTR_6g011460 26.777 422 201 16 159 554 46 385 9.17e-14 73.9
MS.gene050947.t1 MTR_6g022360 34.574 188 106 6 159 342 43 217 1.11e-13 73.6
MS.gene050947.t1 MTR_7g098570 34.225 187 107 5 159 336 20 199 1.52e-13 73.6
MS.gene050947.t1 MTR_5g073340 23.387 372 205 10 159 526 8 303 2.24e-13 71.6
MS.gene050947.t1 MTR_3g107160 25.481 416 229 12 155 554 6 356 2.33e-13 72.4
MS.gene050947.t1 MTR_7g023310 23.364 428 276 15 156 554 23 427 2.59e-13 72.8
MS.gene050947.t1 MTR_3g023270 28.267 329 196 13 155 463 8 316 2.72e-13 72.0
MS.gene050947.t1 MTR_4g080590 26.190 420 265 18 159 555 23 420 5.62e-13 71.6
MS.gene050947.t1 MTR_7g110910 66.038 53 17 1 140 192 148 199 6.54e-13 68.2
MS.gene050947.t1 MTR_7g056447 32.804 189 110 5 159 338 9 189 7.97e-13 69.7
MS.gene050947.t1 MTR_7g055943 26.230 427 206 20 159 554 40 388 1.07e-12 70.9
MS.gene050947.t1 MTR_7g032380 28.704 216 129 5 159 360 11 215 1.18e-12 70.1
MS.gene050947.t1 MTR_6g022500 25.799 438 229 19 154 568 93 457 2.10e-12 70.1
MS.gene050947.t1 MTR_8g469020 26.728 434 260 16 159 555 7 419 2.17e-12 69.7
MS.gene050947.t1 MTR_4g080773 26.651 439 256 16 159 554 19 434 2.58e-12 69.7
MS.gene050947.t1 MTR_7g098510 34.225 187 107 6 159 336 18 197 2.76e-12 69.3
MS.gene050947.t1 MTR_4g080773 26.651 439 256 16 159 554 19 434 2.78e-12 69.7
MS.gene050947.t1 MTR_3g082890 26.218 431 253 17 156 554 14 411 3.02e-12 69.3
MS.gene050947.t1 MTR_7g034115 33.163 196 98 9 159 336 11 191 4.06e-12 68.6
MS.gene050947.t1 MTR_1g085120 31.156 199 111 8 159 342 179 366 5.42e-12 68.6
MS.gene050947.t1 MTR_6g088700 27.224 371 230 14 155 500 10 365 5.61e-12 68.2
MS.gene050947.t1 MTR_1g048340 26.140 329 204 10 152 471 9 307 6.37e-12 67.4
MS.gene050947.t1 MTR_3g099900 27.356 329 206 12 156 464 15 330 6.57e-12 68.2
MS.gene050947.t1 MTR_1g108820 24.757 412 227 16 159 554 8 352 6.81e-12 67.8
MS.gene050947.t1 MTR_3g036250 32.812 192 112 6 156 336 2 187 9.22e-12 67.4
MS.gene050947.t1 MTR_4g080590 28.531 354 214 16 159 489 23 360 9.43e-12 67.4
MS.gene050947.t1 MTR_8g085430 31.343 201 112 8 159 341 11 203 1.08e-11 66.6
MS.gene050947.t1 MTR_4g045680 27.987 318 197 14 152 449 10 315 1.14e-11 67.4
MS.gene050947.t1 MTR_3g108150 32.620 187 106 7 159 336 13 188 1.26e-11 67.0
MS.gene050947.t1 MTR_3g463830 29.885 174 110 3 145 306 49 222 1.36e-11 66.6
MS.gene050947.t1 MTR_8g066650 25.664 339 211 14 153 467 74 395 2.04e-11 66.6
MS.gene050947.t1 MTR_7g033945 35.119 168 82 8 159 306 11 171 2.35e-11 63.2
MS.gene050947.t1 MTR_5g008950 34.579 107 63 3 454 556 233 336 4.15e-11 65.5
MS.gene050947.t1 MTR_3g087260 26.457 446 255 15 159 559 12 429 4.27e-11 65.9
MS.gene050947.t1 MTR_4g024780 28.962 183 106 7 155 320 142 317 4.91e-11 65.9
MS.gene050947.t1 MTR_8g467800 30.645 310 176 12 155 440 16 310 6.52e-11 64.7
MS.gene050947.t1 MTR_4g047950 27.548 363 210 16 155 483 9 352 7.39e-11 64.7
MS.gene050947.t1 MTR_1g094760 30.435 184 103 5 127 298 1 171 8.93e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050947.t1 AT4G00315 30.505 436 244 19 159 559 2 413 4.40e-30 123
MS.gene050947.t1 AT4G26340 28.505 428 253 18 159 565 2 397 2.63e-28 117
MS.gene050947.t1 AT1G55660 29.587 436 248 19 159 559 53 464 6.31e-28 117
MS.gene050947.t1 AT3G59230 29.325 474 249 20 159 573 12 458 1.01e-26 114
MS.gene050947.t1 AT4G14103 29.659 381 204 12 159 499 8 364 1.22e-26 112
MS.gene050947.t1 AT4G14103 29.659 381 204 12 159 499 8 364 1.22e-26 112
MS.gene050947.t1 AT4G14103 29.491 373 199 12 158 490 7 355 2.65e-25 109
MS.gene050947.t1 AT4G13960 27.416 445 253 13 159 559 2 420 1.77e-24 107
MS.gene050947.t1 AT4G13960 27.416 445 253 13 159 559 2 420 1.77e-24 107
MS.gene050947.t1 AT5G62970 28.409 440 246 19 159 554 2 416 5.40e-24 105
MS.gene050947.t1 AT3G59190 27.128 376 213 10 159 490 12 370 8.66e-24 103
MS.gene050947.t1 AT3G59190 27.467 375 213 10 159 490 12 370 8.95e-24 105
MS.gene050947.t1 AT2G26860 29.665 418 249 16 159 554 2 396 3.71e-23 102
MS.gene050947.t1 AT2G26860 29.665 418 249 16 159 554 2 396 3.71e-23 102
MS.gene050947.t1 AT4G10400 26.316 418 245 13 159 554 2 378 4.54e-23 102
MS.gene050947.t1 AT4G10400 26.316 418 245 13 159 554 2 378 4.54e-23 102
MS.gene050947.t1 AT4G10400 26.316 418 245 13 159 554 2 378 4.54e-23 102
MS.gene050947.t1 AT1G06630 31.302 361 201 13 158 490 11 352 5.77e-23 102
MS.gene050947.t1 AT1G06630 31.302 361 201 13 158 490 11 352 5.77e-23 102
MS.gene050947.t1 AT1G06630 31.302 361 201 13 158 490 11 352 5.77e-23 102
MS.gene050947.t1 AT1G06630 31.302 361 201 13 158 490 11 352 5.77e-23 102
MS.gene050947.t1 AT1G58310 27.500 480 250 19 154 563 3 454 6.37e-23 102
MS.gene050947.t1 AT1G06630 31.302 361 201 13 158 490 11 352 7.33e-23 102
MS.gene050947.t1 AT1G06630 31.302 361 201 13 158 490 11 352 7.79e-23 100
MS.gene050947.t1 AT1G06630 31.302 361 201 13 158 490 11 352 7.79e-23 100
MS.gene050947.t1 AT1G06630 31.302 361 201 13 158 490 20 361 8.95e-23 101
MS.gene050947.t1 AT3G59250 28.162 419 228 17 159 555 7 374 1.17e-22 101
MS.gene050947.t1 AT2G42720 31.183 372 190 16 159 490 2 347 1.38e-22 101
MS.gene050947.t1 AT3G62430 30.986 355 208 13 159 490 2 342 2.07e-22 100
MS.gene050947.t1 AT4G14096 27.704 379 209 11 158 499 7 357 3.53e-22 100
MS.gene050947.t1 AT4G14096 27.704 379 209 11 158 499 7 357 3.53e-22 100
MS.gene050947.t1 AT5G38590 26.107 429 268 13 159 569 2 399 4.09e-22 99.4
MS.gene050947.t1 AT5G56440 28.276 435 254 17 159 562 2 409 5.04e-22 99.4
MS.gene050947.t1 AT5G56400 27.354 446 266 17 134 554 8 420 5.18e-22 99.8
MS.gene050947.t1 AT3G59160 27.251 411 215 15 159 503 13 405 1.64e-21 98.2
MS.gene050947.t1 AT3G59000 27.394 449 251 14 159 556 2 426 1.81e-21 98.2
MS.gene050947.t1 AT5G56380 26.415 424 248 13 159 546 2 397 1.96e-21 97.8
MS.gene050947.t1 AT5G56380 26.415 424 248 13 159 546 2 397 1.96e-21 97.8
MS.gene050947.t1 AT4G26350 25.467 428 275 15 159 565 2 406 2.08e-21 97.4
MS.gene050947.t1 AT1G16930 28.960 404 232 16 146 521 2 378 2.20e-21 97.8
MS.gene050947.t1 AT1G16930 28.960 404 232 16 146 521 2 378 2.20e-21 97.8
MS.gene050947.t1 AT1G16930 28.960 404 232 16 146 521 2 378 2.20e-21 97.8
MS.gene050947.t1 AT5G38396 29.737 380 196 14 159 490 2 358 2.88e-21 97.4
MS.gene050947.t1 AT1G51370 27.830 424 244 14 157 554 17 404 5.17e-21 96.3
MS.gene050947.t1 AT5G60610 29.126 412 241 19 159 550 2 382 7.32e-21 95.5
MS.gene050947.t1 AT5G60610 29.126 412 241 19 159 550 2 382 7.32e-21 95.5
MS.gene050947.t1 AT1G52650 25.566 442 256 15 159 554 2 416 7.75e-21 96.3
MS.gene050947.t1 AT2G26030 26.351 444 255 18 159 559 4 418 8.18e-21 95.9
MS.gene050947.t1 AT2G26030 26.126 444 251 18 159 559 4 413 9.11e-21 95.9
MS.gene050947.t1 AT2G26030 26.126 444 251 18 159 559 4 413 9.11e-21 95.9
MS.gene050947.t1 AT3G50710 26.207 435 231 14 159 550 2 389 1.80e-20 94.7
MS.gene050947.t1 AT1G66300 27.974 454 261 19 157 575 27 449 3.13e-20 94.4
MS.gene050947.t1 AT1G55660 33.603 247 133 12 159 386 53 287 3.75e-20 92.8
MS.gene050947.t1 AT2G29930 29.189 370 201 14 159 495 12 353 5.02e-20 93.6
MS.gene050947.t1 AT2G29930 29.189 370 201 14 159 495 12 353 5.02e-20 93.6
MS.gene050947.t1 AT4G22280 31.405 363 215 12 159 505 2 346 7.95e-20 92.4
MS.gene050947.t1 AT1G69630 27.609 460 272 19 144 569 2 434 9.28e-20 92.8
MS.gene050947.t1 AT3G59200 26.905 420 221 16 158 522 6 394 1.06e-19 93.2
MS.gene050947.t1 AT3G59210 28.796 382 219 12 155 499 3 368 1.19e-19 92.8
MS.gene050947.t1 AT3G59210 28.796 382 219 12 155 499 3 368 1.19e-19 92.8
MS.gene050947.t1 AT3G59210 28.796 382 219 12 155 499 3 368 1.19e-19 92.8
MS.gene050947.t1 AT3G59210 28.796 382 219 12 155 499 3 368 1.19e-19 92.8
MS.gene050947.t1 AT3G59210 28.796 382 219 12 155 499 3 368 1.19e-19 92.8
MS.gene050947.t1 AT1G13780 26.818 440 247 16 159 552 10 420 1.55e-19 92.0
MS.gene050947.t1 AT5G38390 26.966 445 252 18 159 560 2 416 2.09e-19 91.7
MS.gene050947.t1 AT3G62440 28.608 395 212 17 159 504 2 375 2.36e-19 91.7
MS.gene050947.t1 AT1G32375 27.751 418 251 18 159 554 2 390 4.13e-19 90.5
MS.gene050947.t1 AT1G32375 27.751 418 251 18 159 554 2 390 4.13e-19 90.5
MS.gene050947.t1 AT5G53840 29.048 420 257 14 152 554 11 406 7.20e-19 90.1
MS.gene050947.t1 AT3G52680 28.404 426 242 17 158 556 20 409 7.84e-19 90.1
MS.gene050947.t1 AT3G03030 27.056 377 215 11 159 490 2 363 8.15e-19 90.1
MS.gene050947.t1 AT3G58880 28.457 376 205 13 159 493 3 355 8.70e-19 89.7
MS.gene050947.t1 AT1G51370 28.535 396 222 13 157 527 17 376 9.04e-19 89.4
MS.gene050947.t1 AT1G05080 28.708 418 256 13 158 554 12 408 1.33e-18 89.0
MS.gene050947.t1 AT5G22670 27.725 422 253 17 158 551 10 407 2.07e-18 88.6
MS.gene050947.t1 AT5G44490 28.125 448 257 19 144 554 2 421 2.12e-18 89.0
MS.gene050947.t1 AT3G58960 28.686 373 219 13 159 498 2 360 2.30e-18 88.6
MS.gene050947.t1 AT5G44490 28.125 448 257 19 144 554 2 421 2.67e-18 88.2
MS.gene050947.t1 AT4G00160 29.078 423 243 17 159 556 16 406 2.69e-18 88.2
MS.gene050947.t1 AT3G58920 26.455 378 225 10 159 493 2 369 3.35e-18 88.2
MS.gene050947.t1 AT5G44950 26.067 445 263 16 158 566 3 417 3.57e-18 87.8
MS.gene050947.t1 AT4G22280 31.897 348 203 12 159 490 2 331 4.96e-18 85.9
MS.gene050947.t1 AT3G26930 27.990 418 256 15 152 552 14 403 5.44e-18 87.4
MS.gene050947.t1 AT5G41830 27.363 402 219 13 154 504 8 387 6.24e-18 87.4
MS.gene050947.t1 AT3G59170 27.251 422 214 15 159 508 7 407 7.74e-18 87.0
MS.gene050947.t1 AT4G13985 26.464 461 288 15 142 568 2 445 1.46e-17 85.9
MS.gene050947.t1 AT1G66290 27.231 437 246 20 152 554 23 421 1.87e-17 85.5
MS.gene050947.t1 AT3G59200 27.461 386 200 15 158 490 6 364 1.96e-17 84.7
MS.gene050947.t1 AT5G56370 27.423 423 255 15 159 564 2 389 2.56e-17 85.1
MS.gene050947.t1 AT5G56370 27.423 423 255 15 159 564 2 389 2.56e-17 85.1
MS.gene050947.t1 AT3G58900 27.295 414 242 11 159 528 2 400 3.08e-17 85.1
MS.gene050947.t1 AT5G56420 24.941 421 278 14 158 565 5 400 3.60e-17 84.7
MS.gene050947.t1 AT5G56420 24.941 421 278 14 158 565 5 400 3.60e-17 84.7
MS.gene050947.t1 AT5G56420 24.941 421 278 14 158 565 5 400 3.60e-17 84.7
MS.gene050947.t1 AT5G41840 25.693 397 223 12 159 499 14 394 5.12e-17 84.7
MS.gene050947.t1 AT4G13965 27.990 418 247 18 159 556 10 393 6.01e-17 84.0
MS.gene050947.t1 AT4G00320 26.702 382 219 11 154 490 8 373 6.11e-17 84.3
MS.gene050947.t1 AT3G58860 26.374 364 210 11 156 487 4 341 6.44e-17 84.0
MS.gene050947.t1 AT3G03040 26.810 373 216 9 159 490 2 358 8.05e-17 84.0
MS.gene050947.t1 AT1G80470 24.762 420 273 16 157 554 13 411 8.18e-17 83.6
MS.gene050947.t1 AT1G78760 26.902 368 208 13 157 490 14 354 9.47e-17 83.6
MS.gene050947.t1 AT3G56780 25.333 450 263 16 161 555 9 440 9.87e-17 83.6
MS.gene050947.t1 AT5G53635 29.574 399 230 18 161 528 2 380 1.13e-16 83.2
MS.gene050947.t1 AT3G26930 27.344 384 234 15 186 552 3 358 1.45e-16 82.4
MS.gene050947.t1 AT3G58980 27.200 375 229 13 159 501 2 364 1.62e-16 83.6
MS.gene050947.t1 AT1G51370 32.661 248 127 8 157 389 17 239 1.93e-16 81.6
MS.gene050947.t1 AT5G56560 27.078 421 243 18 156 550 2 384 2.99e-16 81.6
MS.gene050947.t1 AT1G66310 26.720 378 222 15 144 489 2 356 3.73e-16 81.6
MS.gene050947.t1 AT5G56690 29.167 432 232 21 161 554 4 399 5.16e-16 80.9
MS.gene050947.t1 AT3G49030 26.230 427 251 17 157 556 19 408 5.75e-16 80.9
MS.gene050947.t1 AT2G04230 26.136 440 271 15 159 573 13 423 5.90e-16 80.9
MS.gene050947.t1 AT3G59240 24.773 440 274 13 159 563 8 425 1.40e-15 80.1
MS.gene050947.t1 AT4G10420 28.972 321 190 13 242 554 1 291 1.40e-15 78.6
MS.gene050947.t1 AT5G18780 25.352 426 256 14 159 552 11 406 1.56e-15 79.7
MS.gene050947.t1 AT5G18780 25.352 426 256 14 159 552 11 406 1.56e-15 79.7
MS.gene050947.t1 AT1G55030 26.829 410 253 17 159 552 19 397 1.93e-15 79.3
MS.gene050947.t1 AT1G55030 26.829 410 253 17 159 552 9 387 2.71e-15 78.6
MS.gene050947.t1 AT2G42730 26.810 373 202 16 159 487 5 350 2.98e-15 79.0
MS.gene050947.t1 AT4G15060 27.487 382 215 19 142 490 10 362 3.29e-15 78.6
MS.gene050947.t1 AT5G22700 28.049 410 220 19 159 528 6 380 3.33e-15 78.6
MS.gene050947.t1 AT5G22700 28.049 410 220 19 159 528 6 380 3.33e-15 78.6
MS.gene050947.t1 AT5G22700 28.049 410 220 19 159 528 6 380 3.33e-15 78.6
MS.gene050947.t1 AT5G22700 28.049 410 220 19 159 528 6 380 3.33e-15 78.6
MS.gene050947.t1 AT5G56700 30.878 353 201 19 218 556 29 352 4.48e-15 77.4
MS.gene050947.t1 AT4G13960 26.630 368 217 11 219 559 10 351 6.03e-15 77.4
MS.gene050947.t1 AT4G13960 26.630 368 217 11 219 559 10 351 6.03e-15 77.4
MS.gene050947.t1 AT5G22660 25.612 449 282 17 159 576 13 440 6.72e-15 77.8
MS.gene050947.t1 AT5G22700 28.049 410 220 19 159 528 43 417 7.81e-15 77.8
MS.gene050947.t1 AT3G42770 29.412 357 178 14 164 478 4 328 8.38e-15 77.8
MS.gene050947.t1 AT5G15620 28.354 395 245 13 159 528 2 383 1.04e-14 77.0
MS.gene050947.t1 AT5G18770 26.291 426 259 15 159 552 24 426 1.06e-14 77.4
MS.gene050947.t1 AT5G56410 24.888 446 268 17 159 564 2 420 1.23e-14 77.0
MS.gene050947.t1 AT2G29910 28.814 354 189 16 154 464 24 357 1.43e-14 76.3
MS.gene050947.t1 AT1G66320 24.842 475 275 18 141 575 18 450 1.70e-14 76.6
MS.gene050947.t1 AT3G58940 25.627 359 218 10 159 490 2 338 1.95e-14 77.0
MS.gene050947.t1 AT3G58940 25.627 359 218 10 159 490 2 338 1.95e-14 77.0
MS.gene050947.t1 AT2G29910 28.857 350 186 16 158 464 4 333 2.60e-14 75.1
MS.gene050947.t1 AT2G29910 28.857 350 186 16 158 464 4 333 2.60e-14 75.1
MS.gene050947.t1 AT2G29910 28.857 350 186 16 158 464 4 333 2.60e-14 75.1
MS.gene050947.t1 AT2G29910 28.857 350 186 16 158 464 4 333 2.60e-14 75.1
MS.gene050947.t1 AT3G03030 27.576 330 177 11 159 440 2 317 6.17e-14 73.6
MS.gene050947.t1 AT3G52680 29.692 357 190 15 159 489 21 342 2.17e-13 72.4
MS.gene050947.t1 AT5G38590 27.425 299 174 11 159 437 2 277 3.41e-13 70.9
MS.gene050947.t1 AT5G56820 24.396 414 255 13 159 554 15 388 3.44e-13 72.4
MS.gene050947.t1 AT5G56810 26.353 425 247 15 159 554 15 402 4.56e-13 72.0
MS.gene050947.t1 AT3G58900 27.554 323 184 8 159 441 2 314 5.16e-13 70.9
MS.gene050947.t1 AT1G48400 24.566 403 224 11 158 499 9 392 5.34e-13 72.0
MS.gene050947.t1 AT3G59180 25.515 388 225 13 218 563 48 413 6.32e-13 71.6
MS.gene050947.t1 AT4G15060 29.020 255 141 10 156 387 169 406 8.42e-13 71.6
MS.gene050947.t1 AT3G54910 27.083 336 213 11 222 554 36 342 9.49e-13 70.5
MS.gene050947.t1 AT3G54910 27.083 336 213 11 222 554 36 342 9.49e-13 70.5
MS.gene050947.t1 AT3G54910 27.083 336 213 11 222 554 36 342 9.49e-13 70.5
MS.gene050947.t1 AT3G49150 23.491 464 301 17 157 579 14 464 1.37e-12 70.5
MS.gene050947.t1 AT3G56780 25.059 423 244 16 161 528 9 413 1.53e-12 70.1
MS.gene050947.t1 AT3G58900 27.385 325 180 8 159 440 2 313 1.92e-12 68.9
MS.gene050947.t1 AT3G58900 27.385 325 180 8 159 440 2 313 1.92e-12 68.9
MS.gene050947.t1 AT5G18780 24.862 362 216 10 159 489 11 347 2.38e-12 69.3
MS.gene050947.t1 AT5G18780 24.862 362 216 10 159 489 11 347 2.38e-12 69.3
MS.gene050947.t1 AT3G44060 28.389 391 231 20 164 528 4 371 2.47e-12 69.7
MS.gene050947.t1 AT5G35995 27.297 381 216 18 158 505 4 356 2.48e-12 69.7
MS.gene050947.t1 AT5G35995 27.297 381 216 18 158 505 4 356 2.48e-12 69.7
MS.gene050947.t1 AT4G09920 26.557 305 174 9 159 438 2 281 2.70e-12 68.6
MS.gene050947.t1 AT4G09920 26.557 305 174 9 159 438 2 281 2.70e-12 68.6
MS.gene050947.t1 AT5G22610 26.835 436 255 17 159 552 18 431 2.79e-12 69.7
MS.gene050947.t1 AT5G22610 26.386 451 261 18 159 576 18 430 3.74e-12 69.3
MS.gene050947.t1 AT5G38392 33.990 203 111 6 159 342 2 200 3.83e-12 66.6
MS.gene050947.t1 AT1G21990 28.165 387 208 17 159 499 9 371 3.90e-12 69.3
MS.gene050947.t1 AT3G26922 31.020 245 143 12 159 389 14 246 4.38e-12 67.8
MS.gene050947.t1 AT3G26922 31.020 245 143 12 159 389 14 246 4.38e-12 67.8
MS.gene050947.t1 AT5G18770 26.816 358 212 13 159 485 24 362 5.71e-12 68.2
MS.gene050947.t1 AT4G09920 26.645 304 173 9 159 437 2 280 5.96e-12 67.0
MS.gene050947.t1 AT4G09920 26.645 304 173 9 159 437 2 280 5.96e-12 67.0
MS.gene050947.t1 AT4G09920 26.645 304 173 9 159 437 2 280 5.96e-12 67.0
MS.gene050947.t1 AT5G44970 25.180 417 225 15 157 553 2 351 6.45e-12 68.2
MS.gene050947.t1 AT1G22000 26.512 430 260 18 152 554 22 422 9.57e-12 67.8
MS.gene050947.t1 AT4G03220 24.169 451 277 14 159 554 24 464 1.00e-11 67.8
MS.gene050947.t1 AT2G29910 30.337 267 153 13 158 407 4 254 1.12e-11 67.0
MS.gene050947.t1 AT2G29910 30.337 267 153 13 158 407 4 254 1.12e-11 67.0
MS.gene050947.t1 AT3G44810 28.056 360 214 14 161 490 9 353 1.18e-11 67.4
MS.gene050947.t1 AT2G26030 25.496 353 194 15 243 559 21 340 1.23e-11 67.0
MS.gene050947.t1 AT3G58930 25.275 364 210 13 159 490 2 335 2.99e-11 66.2
MS.gene050947.t1 AT3G58930 25.275 364 210 13 159 490 2 335 2.99e-11 66.2

Find 106 sgRNAs with CRISPR-Local

Find 145 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCATTGCATTTGAATTTAA+AGG 0.125528 7.1:+3756898 MS.gene050947:CDS
GTTTACAACCTCATATATTA+TGG 0.172229 7.1:-3756253 None:intergenic
TATTGCCGCTTAGGCTTTCT+AGG 0.227353 7.1:+3755878 MS.gene050947:CDS
GTTTCAGAATAATTCTCTTT+TGG 0.245220 7.1:-3755403 None:intergenic
TCACAATTTATTATCTTTAT+CGG 0.257922 7.1:+3756543 MS.gene050947:CDS
ATGGCAAGATCCTTAAGTTT+TGG 0.281670 7.1:-3756622 None:intergenic
TTCTACTACTTTCTCTGAAT+CGG 0.286108 7.1:-3757007 None:intergenic
CATCCGAGAGATTGCTTAAT+CGG 0.321375 7.1:-3755147 None:intergenic
CTATAGGCATGAATAAATAA+AGG 0.338690 7.1:-3756152 None:intergenic
TTCCATGGAGCAACAATTCC+AGG 0.342388 7.1:-3755849 None:intergenic
TAAGACGCACCGAAAATATC+AGG 0.345755 7.1:+3755734 MS.gene050947:CDS
TCTATCCGGTTGTCCACATA+TGG 0.370147 7.1:+3756059 MS.gene050947:CDS
CGTCCGAGAGATCGCTTAAT+CGG 0.370383 7.1:-3755456 None:intergenic
CGTCCGAGAGATTGCTTAAT+CGG 0.375246 7.1:-3755249 None:intergenic
AGAAAGCCTAAGCGGCAATA+AGG 0.385894 7.1:-3755875 None:intergenic
ACTTGTGGTCTTGAAGTTGC+GGG 0.396664 7.1:+3755909 MS.gene050947:CDS
AAAGTGAAGGTCGGGGATCT+TGG 0.398450 7.1:-3755668 None:intergenic
TCTACTACTTTCTCTGAATC+GGG 0.403758 7.1:-3757006 None:intergenic
TAAGAGAAAGGAGATATTGA+TGG 0.410077 7.1:-3756115 None:intergenic
AAGAGTAGCTTCATCAAGAT+TGG 0.412017 7.1:-3756280 None:intergenic
ACAATTCCAGGTCAAGTTCC+TGG 0.413747 7.1:-3755837 None:intergenic
ACCCACATGTGTACATCTTC+TGG 0.416507 7.1:-3755790 None:intergenic
ACATAATACTCCAAAACTTA+AGG 0.417295 7.1:+3756612 MS.gene050947:CDS
TTCCTCCATATGTGGACAAC+CGG 0.426350 7.1:-3756064 None:intergenic
TTTACAACCTCATATATTAT+GGG 0.427764 7.1:-3756252 None:intergenic
ACAGATTGGTATGGAATCTC+TGG 0.431531 7.1:-3755697 None:intergenic
CATACTCCAACTGCAATTCT+CGG 0.432105 7.1:-3756575 None:intergenic
ATCTTCGCCCATAATATATG+AGG 0.437696 7.1:+3756245 MS.gene050947:CDS
AATGTCAAATCATTGACTCT+TGG 0.439784 7.1:+3756360 MS.gene050947:CDS
GGTAATTCAAAGTGAAGGTC+GGG 0.442498 7.1:-3755676 None:intergenic
GTTGGAAACTCGAGTTGGGT+GGG 0.456767 7.1:+3756841 MS.gene050947:CDS
CACTTGTGGTCTTGAAGTTG+CGG 0.461529 7.1:+3755908 MS.gene050947:CDS
ACTTAAGGATCTTGCCATTG+AGG 0.465062 7.1:+3756627 MS.gene050947:CDS
TATAGGCATGAATAAATAAA+GGG 0.474257 7.1:-3756151 None:intergenic
GTCGGGGATCTTGGTGCAGA+TGG 0.474821 7.1:-3755659 None:intergenic
TGAAAGACATGTCGGAGTTA+CGG 0.477178 7.1:-3756869 None:intergenic
AAATTCAAATGCAATGAGAC+TGG 0.478300 7.1:-3756893 None:intergenic
TCAAAAGAAGAACTGAATCC+TGG 0.483175 7.1:-3755943 None:intergenic
CCAATGTGAGATGCAACTAT+AGG 0.493695 7.1:-3756168 None:intergenic
TAATCTCTTTAATAAGAGAA+AGG 0.493855 7.1:-3756127 None:intergenic
CAAGGTCCAGGAACTTGACC+TGG 0.494419 7.1:+3755831 MS.gene050947:CDS
GATCTCGATAAATTTCTATC+CGG 0.494922 7.1:+3756045 MS.gene050947:CDS
GGCATTAGATCTCAAGGTCC+AGG 0.496808 7.1:+3755819 MS.gene050947:CDS
GAAATCCTCGGTACTAGTAT+TGG 0.498768 7.1:+3757053 MS.gene050947:CDS
TAGAAAGAACTTCAAGTGAC+GGG 0.502699 7.1:-3756209 None:intergenic
TTCTAGGTGTGAGTCACTTG+TGG 0.504741 7.1:+3755894 MS.gene050947:CDS
AAAAGTAATTCCTCCATATG+TGG 0.505129 7.1:-3756072 None:intergenic
TCAATTCTATGAAAGGATTG+AGG 0.505807 7.1:+3755072 MS.gene050947:intron
GGAGGTTGGAAACTCGAGTT+GGG 0.509671 7.1:+3756837 MS.gene050947:CDS
TGTACACATGTGGGTTTCAA+AGG 0.516400 7.1:+3755798 MS.gene050947:CDS
AAAGAGCGGCATATACAGAT+TGG 0.520233 7.1:-3755711 None:intergenic
AGATGAGAATTCTGAAACAG+TGG 0.534226 7.1:+3755099 MS.gene050947:CDS
AGTAGAAAGAAGTTTACTCA+AGG 0.539582 7.1:+3757023 MS.gene050947:CDS
CTAAGTCTCGATAGTGTGGT+AGG 0.540995 7.1:+3755760 MS.gene050947:CDS
TTCAAAGGCATTAGATCTCA+AGG 0.542872 7.1:+3755813 MS.gene050947:CDS
GTAGAAAGAAGTTTACTCAA+GGG 0.543204 7.1:+3757024 MS.gene050947:CDS
AAACATCATACATACCTCAA+TGG 0.547505 7.1:-3756641 None:intergenic
GCGGCATATACAGATTGGTA+TGG 0.551486 7.1:-3755706 None:intergenic
AATTCTCAAAGAAAGGAGGT+TGG 0.554584 7.1:+3756823 MS.gene050947:CDS
GACCTGGAATTGTTGCTCCA+TGG 0.556784 7.1:+3755847 MS.gene050947:CDS
GACGGGGCATTAATTTGCAC+AGG 0.557868 7.1:-3756192 None:intergenic
GGTGCAGATGGATCCCCACC+TGG 0.563183 7.1:-3755647 None:intergenic
AGACGAGAATTCTGAAACAG+TGG 0.563383 7.1:+3755201 MS.gene050947:CDS
AGACGAGAATTCTGAAACAG+TGG 0.563383 7.1:+3755510 MS.gene050947:CDS
TTGGAAACTCGAGTTGGGTG+GGG 0.565472 7.1:+3756842 MS.gene050947:CDS
AGGAGGTTGGAAACTCGAGT+TGG 0.571978 7.1:+3756836 MS.gene050947:CDS
TCACTCAAGGAAGTTAGAGC+GGG 0.572851 7.1:+3756969 MS.gene050947:CDS
AAGAGAAAGGAGATATTGAT+GGG 0.580175 7.1:-3756114 None:intergenic
TGGTAATTCAAAGTGAAGGT+CGG 0.580635 7.1:-3755677 None:intergenic
TGTTATGCAGATTATCAGCA+TGG 0.581338 7.1:+3756486 MS.gene050947:intron
TGCGTTCTATCCACCAGGTG+GGG 0.581772 7.1:+3755634 MS.gene050947:CDS
TGACCGATTAAGCAATCTCT+CGG 0.587870 7.1:+3755144 MS.gene050947:CDS
TTGCGGGGCAGAATTCGTCC+AGG 0.590859 7.1:+3755925 MS.gene050947:CDS
TTCGGTGCGTCTTAAAAGAG+CGG 0.591879 7.1:-3755725 None:intergenic
CGAGAATTCTGAAACAGTGG+TGG 0.596138 7.1:+3755513 MS.gene050947:CDS
ATAGAAAGAACTTCAAGTGA+CGG 0.600777 7.1:-3756210 None:intergenic
TGACCGATTAAGCGATCTCT+CGG 0.605594 7.1:+3755453 MS.gene050947:CDS
CCTATAGTTGCATCTCACAT+TGG 0.605957 7.1:+3756168 MS.gene050947:CDS
GGTTGGAAACTCGAGTTGGG+TGG 0.608269 7.1:+3756840 MS.gene050947:CDS
TGTATATTATAAATCACTCA+AGG 0.609042 7.1:+3756956 MS.gene050947:CDS
TAGAAAGAAGTTTACTCAAG+GGG 0.610799 7.1:+3757025 MS.gene050947:CDS
AAATATCCGAGAATTGCAGT+TGG 0.613915 7.1:+3756569 MS.gene050947:CDS
ATCACTCAAGGAAGTTAGAG+CGG 0.615827 7.1:+3756968 MS.gene050947:CDS
ATCCGGTTGTCCACATATGG+AGG 0.616449 7.1:+3756062 MS.gene050947:CDS
TGACCGATTAAGCAATCTCT+CGG 0.617269 7.1:+3755246 MS.gene050947:CDS
GAAACTAAGTCTCGATAGTG+TGG 0.619964 7.1:+3755756 MS.gene050947:CDS
ATGCGTTCTATCCACCAGGT+GGG 0.620457 7.1:+3755633 MS.gene050947:CDS
GAACATGCGTTCTATCCACC+AGG 0.626779 7.1:+3755629 MS.gene050947:CDS
AACCAGAAGATGTACACATG+TGG 0.628998 7.1:+3755788 MS.gene050947:CDS
AGATGAAGAATCTTTAGTGA+AGG 0.630833 7.1:-3755976 None:intergenic
AGACATGTCGGAGTTACGGA+TGG 0.631627 7.1:-3756865 None:intergenic
TCTCTGGTAATTCAAAGTGA+AGG 0.632891 7.1:-3755681 None:intergenic
ACCAGAAGATGTACACATGT+GGG 0.637381 7.1:+3755789 MS.gene050947:CDS
CTTGTGGTCTTGAAGTTGCG+GGG 0.638622 7.1:+3755910 MS.gene050947:CDS
GAGAATTCTGAAACAGTGGT+GGG 0.640621 7.1:+3755514 MS.gene050947:CDS
AGTCTGTATACACTCATGAA+AGG 0.644670 7.1:+3756330 MS.gene050947:CDS
TCATACCAATACTAGTACCG+AGG 0.645128 7.1:-3757058 None:intergenic
GTAATTCAAAGTGAAGGTCG+GGG 0.651989 7.1:-3755675 None:intergenic
CAAGGGGTCAGAGAAATCCT+CGG 0.659059 7.1:+3757041 MS.gene050947:CDS
AGACTGGTTGAAAGACATGT+CGG 0.659512 7.1:-3756877 None:intergenic
TCACACCTAGAAAGCCTAAG+CGG 0.681212 7.1:-3755883 None:intergenic
AGACGAGAATTATGAAACAG+TGG 0.690294 7.1:+3755303 MS.gene050947:CDS
AGAAAGAACTTCAAGTGACG+GGG 0.690501 7.1:-3756208 None:intergenic
CATGCGTTCTATCCACCAGG+TGG 0.691124 7.1:+3755632 MS.gene050947:CDS
GCAGATGGATCCCCACCTGG+TGG 0.714103 7.1:-3755644 None:intergenic
TATGCAGATTATCAGCATGG+AGG 0.721753 7.1:+3756489 MS.gene050947:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGATTTGATTTTTAATATT+AGG + chr7.1:3755167-3755186 MS.gene050947:CDS 10.0%
!! TCACAATTTATTATCTTTAT+CGG + chr7.1:3756543-3756562 MS.gene050947:CDS 15.0%
!!! AAGATTCTAATGATAATTTT+TGG + chr7.1:3756769-3756788 MS.gene050947:intron 15.0%
!!! ATTTGCACAAATTTTTAAAA+AGG + chr7.1:3756674-3756693 MS.gene050947:intron 15.0%
!! TAATCTCTTTAATAAGAGAA+AGG - chr7.1:3756130-3756149 None:intergenic 20.0%
!! TATAGGCATGAATAAATAAA+GGG - chr7.1:3756154-3756173 None:intergenic 20.0%
!! TGAAAAAAATTCTCAAAGAA+AGG + chr7.1:3756816-3756835 MS.gene050947:CDS 20.0%
!! TGTATATTATAAATCACTCA+AGG + chr7.1:3756956-3756975 MS.gene050947:CDS 20.0%
!! TTTACAACCTCATATATTAT+GGG - chr7.1:3756255-3756274 None:intergenic 20.0%
!!! ACGATTTGACTTTTAATATT+AGG + chr7.1:3755371-3755390 MS.gene050947:CDS 20.0%
!!! ACGATTTGATTTTTCATATT+AGG + chr7.1:3755269-3755288 MS.gene050947:CDS 20.0%
!!! ATGTAATTTGTGTTTGTTTT+TGG + chr7.1:3754995-3755014 MS.gene050947:intron 20.0%
!!! GATTTTTAATATTAGGATTG+AGG + chr7.1:3755174-3755193 MS.gene050947:CDS 20.0%
! AAAAAATTCTCAAAGAAAGG+AGG + chr7.1:3756819-3756838 MS.gene050947:CDS 25.0%
! AATGAAAAGAGATTTGCATA+TGG - chr7.1:3756457-3756476 None:intergenic 25.0%
! ACATAATACTCCAAAACTTA+AGG + chr7.1:3756612-3756631 MS.gene050947:CDS 25.0%
! ATACAAAACCCTAAATGAAA+AGG - chr7.1:3754910-3754929 None:intergenic 25.0%
! ATAGTTTAGAGACGAAATAA+TGG + chr7.1:3754836-3754855 MS.gene050947:intron 25.0%
! ATGAAAAGAGATTTGCATAT+GGG - chr7.1:3756456-3756475 None:intergenic 25.0%
! CTATAGGCATGAATAAATAA+AGG - chr7.1:3756155-3756174 None:intergenic 25.0%
! CTCATTGCATTTGAATTTAA+AGG + chr7.1:3756898-3756917 MS.gene050947:CDS 25.0%
! GTTTACAACCTCATATATTA+TGG - chr7.1:3756256-3756275 None:intergenic 25.0%
! TCAAAACATAAAAACTGAGT+TGG + chr7.1:3756924-3756943 MS.gene050947:CDS 25.0%
!! ACTTAGTTTCCTGATATTTT+CGG - chr7.1:3755746-3755765 None:intergenic 25.0%
!! GACTTTTAATATTAGGATTG+AGG + chr7.1:3755378-3755397 MS.gene050947:CDS 25.0%
!! GATTTTTCATATTAGGATTG+AGG + chr7.1:3755276-3755295 MS.gene050947:CDS 25.0%
!! GTTTCAGAATAATTCTCTTT+TGG - chr7.1:3755406-3755425 None:intergenic 25.0%
!! TATAAGACTCTTTTGTTGAT+AGG - chr7.1:3755609-3755628 None:intergenic 25.0%
AAAAGTAATTCCTCCATATG+TGG - chr7.1:3756075-3756094 None:intergenic 30.0%
AAACATCATACATACCTCAA+TGG - chr7.1:3756644-3756663 None:intergenic 30.0%
AAATTCAAATGCAATGAGAC+TGG - chr7.1:3756896-3756915 None:intergenic 30.0%
AAGAGAAAGGAGATATTGAT+GGG - chr7.1:3756117-3756136 None:intergenic 30.0%
AGATGAAGAATCTTTAGTGA+AGG - chr7.1:3755979-3755998 None:intergenic 30.0%
AGTAGAAAGAAGTTTACTCA+AGG + chr7.1:3757023-3757042 MS.gene050947:CDS 30.0%
ATAGAAAGAACTTCAAGTGA+CGG - chr7.1:3756213-3756232 None:intergenic 30.0%
GATCTCGATAAATTTCTATC+CGG + chr7.1:3756045-3756064 MS.gene050947:CDS 30.0%
GTAGAAAGAAGTTTACTCAA+GGG + chr7.1:3757024-3757043 MS.gene050947:CDS 30.0%
GTATACAGACTGTAAAAATC+TGG - chr7.1:3756321-3756340 None:intergenic 30.0%
TAAGAGAAAGGAGATATTGA+TGG - chr7.1:3756118-3756137 None:intergenic 30.0%
TAGAAAGAAGTTTACTCAAG+GGG + chr7.1:3757025-3757044 MS.gene050947:CDS 30.0%
TCAATCCTTTCATAGAATTG+AGG - chr7.1:3755073-3755092 None:intergenic 30.0%
TCAATTCTATGAAAGGATTG+AGG + chr7.1:3755072-3755091 MS.gene050947:intron 30.0%
TTCTACTACTTTCTCTGAAT+CGG - chr7.1:3757010-3757029 None:intergenic 30.0%
! TTTTCATATTAGGATTGAGG+AGG + chr7.1:3755279-3755298 MS.gene050947:CDS 30.0%
!! AATGTCAAATCATTGACTCT+TGG + chr7.1:3756360-3756379 MS.gene050947:CDS 30.0%
!! TATGGAGGAATTACTTTTAG+AGG + chr7.1:3756077-3756096 MS.gene050947:CDS 30.0%
!! TTCATCCTGTGTTTTTATGA+AGG + chr7.1:3754878-3754897 MS.gene050947:intron 30.0%
AAAAGAGATTTGCATATGGG+TGG - chr7.1:3756453-3756472 None:intergenic 35.0%
AAATATCCGAGAATTGCAGT+TGG + chr7.1:3756569-3756588 MS.gene050947:CDS 35.0%
AAGACCAAGTAAAAGATACG+CGG + chr7.1:3756739-3756758 MS.gene050947:intron 35.0%
AAGAGTAGCTTCATCAAGAT+TGG - chr7.1:3756283-3756302 None:intergenic 35.0%
AATGGTGTGTGAACTTAGAT+AGG + chr7.1:3754854-3754873 MS.gene050947:intron 35.0%
AATTCTCAAAGAAAGGAGGT+TGG + chr7.1:3756823-3756842 MS.gene050947:CDS 35.0%
AGACGAGAATTATGAAACAG+TGG + chr7.1:3755303-3755322 MS.gene050947:CDS 35.0%
AGTCTGTATACACTCATGAA+AGG + chr7.1:3756330-3756349 MS.gene050947:CDS 35.0%
ATCTTCGCCCATAATATATG+AGG + chr7.1:3756245-3756264 MS.gene050947:CDS 35.0%
CAATGCCTTCATAAAAACAC+AGG - chr7.1:3754886-3754905 None:intergenic 35.0%
CATAGAATTGAGGAAGAGAA+CGG - chr7.1:3755063-3755082 None:intergenic 35.0%
CGTCTCTAAACTATCTATGA+TGG - chr7.1:3754830-3754849 None:intergenic 35.0%
CTCTTCCTCAATTCTATGAA+AGG + chr7.1:3755065-3755084 MS.gene050947:intron 35.0%
GAAAAATCAAATCGTCTGAG+AGG - chr7.1:3755573-3755592 None:intergenic 35.0%
TAATCGATGCATGTATGACA+TGG + chr7.1:3754935-3754954 MS.gene050947:intron 35.0%
TAGAAAGAACTTCAAGTGAC+GGG - chr7.1:3756212-3756231 None:intergenic 35.0%
TCAAAAGAAGAACTGAATCC+TGG - chr7.1:3755946-3755965 None:intergenic 35.0%
TCTACTACTTTCTCTGAATC+GGG - chr7.1:3757009-3757028 None:intergenic 35.0%
TCTCTGGTAATTCAAAGTGA+AGG - chr7.1:3755684-3755703 None:intergenic 35.0%
TGGTAATTCAAAGTGAAGGT+CGG - chr7.1:3755680-3755699 None:intergenic 35.0%
TGTTATGCAGATTATCAGCA+TGG + chr7.1:3756486-3756505 MS.gene050947:intron 35.0%
! ATGGCAAGATCCTTAAGTTT+TGG - chr7.1:3756625-3756644 None:intergenic 35.0%
! GATTTTTCATATCACGATCG+AGG + chr7.1:3755483-3755502 MS.gene050947:CDS 35.0%
!! AGATGAGAATTCTGAAACAG+TGG + chr7.1:3755099-3755118 MS.gene050947:CDS 35.0%
!! TTCAAAGGCATTAGATCTCA+AGG + chr7.1:3755813-3755832 MS.gene050947:CDS 35.0%
!!! AGGCATTGACCTTTTCATTT+AGG + chr7.1:3754898-3754917 MS.gene050947:intron 35.0%
!!! GGCATTGACCTTTTCATTTA+GGG + chr7.1:3754899-3754918 MS.gene050947:intron 35.0%
AAAGAGCGGCATATACAGAT+TGG - chr7.1:3755714-3755733 None:intergenic 40.0%
AACCAGAAGATGTACACATG+TGG + chr7.1:3755788-3755807 MS.gene050947:CDS 40.0%
ACAGATTGGTATGGAATCTC+TGG - chr7.1:3755700-3755719 None:intergenic 40.0%
ACCAGAAGATGTACACATGT+GGG + chr7.1:3755789-3755808 MS.gene050947:CDS 40.0%
ACTTAAGGATCTTGCCATTG+AGG + chr7.1:3756627-3756646 MS.gene050947:CDS 40.0%
AGAAAGAACTTCAAGTGACG+GGG - chr7.1:3756211-3756230 None:intergenic 40.0%
AGTAAAAGATACGCGGAGTT+TGG + chr7.1:3756746-3756765 MS.gene050947:intron 40.0%
ATCACTCAAGGAAGTTAGAG+CGG + chr7.1:3756968-3756987 MS.gene050947:CDS 40.0%
CATACTCCAACTGCAATTCT+CGG - chr7.1:3756578-3756597 None:intergenic 40.0%
CATCCGAGAGATTGCTTAAT+CGG - chr7.1:3755150-3755169 None:intergenic 40.0%
CCAATGTGAGATGCAACTAT+AGG - chr7.1:3756171-3756190 None:intergenic 40.0%
CCTATAGTTGCATCTCACAT+TGG + chr7.1:3756168-3756187 MS.gene050947:CDS 40.0%
GAAACTAAGTCTCGATAGTG+TGG + chr7.1:3755756-3755775 MS.gene050947:CDS 40.0%
GAAATCCTCGGTACTAGTAT+TGG + chr7.1:3757053-3757072 MS.gene050947:CDS 40.0%
GGTAATTCAAAGTGAAGGTC+GGG - chr7.1:3755679-3755698 None:intergenic 40.0%
GTAATTCAAAGTGAAGGTCG+GGG - chr7.1:3755678-3755697 None:intergenic 40.0%
TAAGACGCACCGAAAATATC+AGG + chr7.1:3755734-3755753 MS.gene050947:CDS 40.0%
TATGCAGATTATCAGCATGG+AGG + chr7.1:3756489-3756508 MS.gene050947:intron 40.0%
TCATACCAATACTAGTACCG+AGG - chr7.1:3757061-3757080 None:intergenic 40.0%
TGAAAGACATGTCGGAGTTA+CGG - chr7.1:3756872-3756891 None:intergenic 40.0%
TGACCGATTAAGCAATCTCT+CGG + chr7.1:3755144-3755163 MS.gene050947:CDS 40.0%
TGCATATGGGTGGCAAAATA+TGG - chr7.1:3756443-3756462 None:intergenic 40.0%
TGTACACATGTGGGTTTCAA+AGG + chr7.1:3755798-3755817 MS.gene050947:CDS 40.0%
! AACTCCGCGTATCTTTTACT+TGG - chr7.1:3756746-3756765 None:intergenic 40.0%
! ACTATCTATGATGGTGCTCA+CGG - chr7.1:3754821-3754840 None:intergenic 40.0%
! AGACTGGTTGAAAGACATGT+CGG - chr7.1:3756880-3756899 None:intergenic 40.0%
! GAAAAACCTTATTGCCGCTT+AGG + chr7.1:3755869-3755888 MS.gene050947:CDS 40.0%
!! AGACGAGAATTCTGAAACAG+TGG + chr7.1:3755201-3755220 MS.gene050947:CDS 40.0%
!! GAGAATTCTGAAACAGTGGT+GGG + chr7.1:3755103-3755122 MS.gene050947:CDS 40.0%
ACAATTCCAGGTCAAGTTCC+TGG - chr7.1:3755840-3755859 None:intergenic 45.0%
ACCCACATGTGTACATCTTC+TGG - chr7.1:3755793-3755812 None:intergenic 45.0%
AGAAAGCCTAAGCGGCAATA+AGG - chr7.1:3755878-3755897 None:intergenic 45.0%
CGTCCGAGAGATTGCTTAAT+CGG - chr7.1:3755252-3755271 None:intergenic 45.0%
CTAAGTCTCGATAGTGTGGT+AGG + chr7.1:3755760-3755779 MS.gene050947:CDS 45.0%
GCGGCATATACAGATTGGTA+TGG - chr7.1:3755709-3755728 None:intergenic 45.0%
TCACACCTAGAAAGCCTAAG+CGG - chr7.1:3755886-3755905 None:intergenic 45.0%
TCACTCAAGGAAGTTAGAGC+GGG + chr7.1:3756969-3756988 MS.gene050947:CDS 45.0%
TCTATCCGGTTGTCCACATA+TGG + chr7.1:3756059-3756078 MS.gene050947:CDS 45.0%
TGACCGATTAAGCGATCTCT+CGG + chr7.1:3755453-3755472 MS.gene050947:CDS 45.0%
TTCCATGGAGCAACAATTCC+AGG - chr7.1:3755852-3755871 None:intergenic 45.0%
TTCCTCCATATGTGGACAAC+CGG - chr7.1:3756067-3756086 None:intergenic 45.0%
TTCTAGGTGTGAGTCACTTG+TGG + chr7.1:3755894-3755913 MS.gene050947:CDS 45.0%
! ACTTGTGGTCTTGAAGTTGC+GGG + chr7.1:3755909-3755928 MS.gene050947:CDS 45.0%
! CACTTGTGGTCTTGAAGTTG+CGG + chr7.1:3755908-3755927 MS.gene050947:CDS 45.0%
! GCGGCAATAAGGTTTTTCCA+TGG - chr7.1:3755867-3755886 None:intergenic 45.0%
! TATTGCCGCTTAGGCTTTCT+AGG + chr7.1:3755878-3755897 MS.gene050947:CDS 45.0%
! TTCGGTGCGTCTTAAAAGAG+CGG - chr7.1:3755728-3755747 None:intergenic 45.0%
!! CGAGAATTCTGAAACAGTGG+TGG + chr7.1:3755204-3755223 MS.gene050947:CDS 45.0%
AAAGTGAAGGTCGGGGATCT+TGG - chr7.1:3755671-3755690 None:intergenic 50.0%
AGACATGTCGGAGTTACGGA+TGG - chr7.1:3756868-3756887 None:intergenic 50.0%
AGGAGGTTGGAAACTCGAGT+TGG + chr7.1:3756836-3756855 MS.gene050947:CDS 50.0%
ATCCGGTTGTCCACATATGG+AGG + chr7.1:3756062-3756081 MS.gene050947:CDS 50.0%
ATGCGTTCTATCCACCAGGT+GGG + chr7.1:3755633-3755652 MS.gene050947:CDS 50.0%
CAAGGGGTCAGAGAAATCCT+CGG + chr7.1:3757041-3757060 MS.gene050947:CDS 50.0%
CGTCCGAGAGATCGCTTAAT+CGG - chr7.1:3755459-3755478 None:intergenic 50.0%
GAACATGCGTTCTATCCACC+AGG + chr7.1:3755629-3755648 MS.gene050947:CDS 50.0%
GACCTGGAATTGTTGCTCCA+TGG + chr7.1:3755847-3755866 MS.gene050947:CDS 50.0%
GGAGGTTGGAAACTCGAGTT+GGG + chr7.1:3756837-3756856 MS.gene050947:CDS 50.0%
GGCATTAGATCTCAAGGTCC+AGG + chr7.1:3755819-3755838 MS.gene050947:CDS 50.0%
! CTTGTGGTCTTGAAGTTGCG+GGG + chr7.1:3755910-3755929 MS.gene050947:CDS 50.0%
!! GACGGGGCATTAATTTGCAC+AGG - chr7.1:3756195-3756214 None:intergenic 50.0%
!! GTTGGAAACTCGAGTTGGGT+GGG + chr7.1:3756841-3756860 MS.gene050947:CDS 50.0%
!! TTGGAAACTCGAGTTGGGTG+GGG + chr7.1:3756842-3756861 MS.gene050947:CDS 50.0%
CAAGGTCCAGGAACTTGACC+TGG + chr7.1:3755831-3755850 MS.gene050947:CDS 55.0%
CATGCGTTCTATCCACCAGG+TGG + chr7.1:3755632-3755651 MS.gene050947:CDS 55.0%
TGCGTTCTATCCACCAGGTG+GGG + chr7.1:3755634-3755653 MS.gene050947:CDS 55.0%
!! GGTTGGAAACTCGAGTTGGG+TGG + chr7.1:3756840-3756859 MS.gene050947:CDS 55.0%
TTGCGGGGCAGAATTCGTCC+AGG + chr7.1:3755925-3755944 MS.gene050947:CDS 60.0%
! GTCGGGGATCTTGGTGCAGA+TGG - chr7.1:3755662-3755681 None:intergenic 60.0%
GCAGATGGATCCCCACCTGG+TGG - chr7.1:3755647-3755666 None:intergenic 65.0%
GGTGCAGATGGATCCCCACC+TGG - chr7.1:3755650-3755669 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 3754779 3757139 3754779 ID=MS.gene050947
chr7.1 mRNA 3754779 3757139 3754779 ID=MS.gene050947.t1;Parent=MS.gene050947
chr7.1 exon 3754779 3754783 3754779 ID=MS.gene050947.t1.exon1;Parent=MS.gene050947.t1
chr7.1 CDS 3754779 3754783 3754779 ID=cds.MS.gene050947.t1;Parent=MS.gene050947.t1
chr7.1 exon 3755087 3756398 3755087 ID=MS.gene050947.t1.exon2;Parent=MS.gene050947.t1
chr7.1 CDS 3755087 3756398 3755087 ID=cds.MS.gene050947.t1;Parent=MS.gene050947.t1
chr7.1 exon 3756496 3756648 3756496 ID=MS.gene050947.t1.exon3;Parent=MS.gene050947.t1
chr7.1 CDS 3756496 3756648 3756496 ID=cds.MS.gene050947.t1;Parent=MS.gene050947.t1
chr7.1 exon 3756808 3757074 3756808 ID=MS.gene050947.t1.exon4;Parent=MS.gene050947.t1
chr7.1 CDS 3756808 3757074 3756808 ID=cds.MS.gene050947.t1;Parent=MS.gene050947.t1
chr7.1 exon 3757137 3757139 3757137 ID=MS.gene050947.t1.exon5;Parent=MS.gene050947.t1
chr7.1 CDS 3757137 3757139 3757137 ID=cds.MS.gene050947.t1;Parent=MS.gene050947.t1
Gene Sequence

>MS.gene050947

ATGAGGTAAGTTTTTTTCTCAATATTAATTTTGTTTTAACCGTGAGCACCATCATAGATAGTTTAGAGACGAAATAATGGTGTGTGAACTTAGATAGGATTCATCCTGTGTTTTTATGAAGGCATTGACCTTTTCATTTAGGGTTTTGTATTTTCATAATCGATGCATGTATGACATGGACATGATATTATATGATTTTTCTTTTCTTTTTGAGTAATGTAATTTGTGTTTGTTTTTGGATCAGACTTTGAATAATTCTATGAAAGCATTTTTTTTAGTAACCGTTCTCTTCCTCAATTCTATGAAAGGATTGAGGAAGTAGATGAGAATTCTGAAACAGTGGTGTGCTCTTACGAAGAAGAACATGACCGATTAAGCAATCTCTCGGATGATTTGATTTTTAATATTAGGATTGAGGAAGCAGACGAGAATTCTGAAACAGTGGTGTGCTCTTACGATGAAGAACATGACCGATTAAGCAATCTCTCGGACGATTTGATTTTTCATATTAGGATTGAGGAGGTAGACGAGAATTATGAAACAGTGGTGTGCTCTTACGAAGAAGAACATGATCGATTAAGCAATTTCTCAGACGATTTGACTTTTAATATTAGGATTGAGGAACCAAAAGAGAATTATTCTGAAACAGCAGTGTGCTCTTACGATGAAGAACATGACCGATTAAGCGATCTCTCGGACGATTTGATTTTTCATATCACGATCGAGGAAGCAGACGAGAATTCTGAAACAGTGGTGGGCTCTTACGATGAAGAACATGATCGATTAAGCAACCTCTCAGACGATTTGATTTTTCATATTTTGTCTTTCCTATCAACAAAAGAGTCTTATAGAACATGCGTTCTATCCACCAGGTGGGGATCCATCTGCACCAAGATCCCCGACCTTCACTTTGAATTACCAGAGATTCCATACCAATCTGTATATGCCGCTCTTTTAAGACGCACCGAAAATATCAGGAAACTAAGTCTCGATAGTGTGGTAGGCTGTCAACCAGAAGATGTACACATGTGGGTTTCAAAGGCATTAGATCTCAAGGTCCAGGAACTTGACCTGGAATTGTTGCTCCATGGAAAAACCTTATTGCCGCTTAGGCTTTCTAGGTGTGAGTCACTTGTGGTCTTGAAGTTGCGGGGCAGAATTCGTCCAGGATTCAGTTCTTCTTTTGATGTATATTTACCTTCACTAAAGATTCTTCATCTTCGATTAACTGTGTTACTTTCTATGTTTGACGATCATATCGAGTATGATCTCGATAAATTTCTATCCGGTTGTCCACATATGGAGGAATTACTTTTAGAGGACATCTTTCAACAACCCATCAATATCTCCTTTCTCTTATTAAAGAGATTAACCCTTTATTTATTCATGCCTATAGTTGCATCTCACATTGGTCCTGTGCAAATTAATGCCCCGTCACTTGAAGTTCTTTCTATTACTGATTATTCATCTTCGCCCATAATATATGAGGTTGTAAACTTGTCCAATCTTGATGAAGCTACTCTTTTCATTGATCAGCTTCCAGATTTTTACAGTCTGTATACACTCATGAAAGGACTTTCTAATGTCAAATCATTGACTCTTGGTTCTAAAACTTTTCATGTAAGTTTCATAATTTTTTCTTTCTTTTTTAATGATAATTTCCATATTTTGCCACCCATATGCAAATCTCTTTTCATTCTTTAATCTTGTTATGCAGATTATCAGCATGGAGGACAAACTTGAAAAAGTACATCTTCTCACTTTTCACAATTTATTATCTTTATCGGTTGAAATATCCGAGAATTGCAGTTGGAGTATGCTTGTTTGCTTTCTACATAATACTCCAAAACTTAAGGATCTTGCCATTGAGGTATGTATGATGTTTTCTCAACTATATTTGCACAAATTTTTAAAAAGGTAAAATATATTAATAAGCTCAAAATCTAGCACAAGAAATGCAAAGACCAAGTAAAAGATACGCGGAGTTTGGAAGATTCTAATGATAATTTTTGGTATTGTTTACATGCAGAAAGAAATTGAAAAAAATTCTCAAAGAAAGGAGGTTGGAAACTCGAGTTGGGTGGGGCCATCCGTAACTCCGACATGTCTTTCAACCAGTCTCATTGCATTTGAATTTAAAGGAATTCAAAACATAAAAACTGAGTTGGACTTTGCGCTGTATATTATAAATCACTCAAGGAAGTTAGAGCGGGTAAAGATTTTCACACCCGATTCAGAGAAAGTAGTAGAAAGAAGTTTACTCAAGGGGTCAGAGAAATCCTCGGTACTAGTATTGGTATGAAGTATATACTTTCTTTTTTCAATATTGAGTTTATACTATTTTTATAATGAAAAAAGTGA

Protein sequence

>MS.gene050947.t1

MRIEEVDENSETVVCSYEEEHDRLSNLSDDLIFNIRIEEADENSETVVCSYDEEHDRLSNLSDDLIFHIRIEEVDENYETVVCSYEEEHDRLSNFSDDLTFNIRIEEPKENYSETAVCSYDEEHDRLSDLSDDLIFHITIEEADENSETVVGSYDEEHDRLSNLSDDLIFHILSFLSTKESYRTCVLSTRWGSICTKIPDLHFELPEIPYQSVYAALLRRTENIRKLSLDSVVGCQPEDVHMWVSKALDLKVQELDLELLLHGKTLLPLRLSRCESLVVLKLRGRIRPGFSSSFDVYLPSLKILHLRLTVLLSMFDDHIEYDLDKFLSGCPHMEELLLEDIFQQPINISFLLLKRLTLYLFMPIVASHIGPVQINAPSLEVLSITDYSSSPIIYEVVNLSNLDEATLFIDQLPDFYSLYTLMKGLSNVKSLTLGSKTFHIISMEDKLEKVHLLTFHNLLSLSVEISENCSWSMLVCFLHNTPKLKDLAIEKEIEKNSQRKEVGNSSWVGPSVTPTCLSTSLIAFEFKGIQNIKTELDFALYIINHSRKLERVKIFTPDSEKVVERSLLKGSEKSSVLVL