Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89956.t1 | XP_024638552.1 | 95.8 | 501 | 21 | 0 | 1 | 501 | 1 | 501 | 4.60E-252 | 880.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89956.t1 | Q84X02 | 28.4 | 455 | 264 | 13 | 9 | 457 | 2 | 400 | 3.7e-24 | 114.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89956.t1 | A0A072UVN2 | 95.8 | 501 | 21 | 0 | 1 | 501 | 1 | 501 | 3.3e-252 | 880.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89956.t1 | MTR_4g055990 | 96.008 | 501 | 20 | 0 | 1 | 501 | 1 | 501 | 0.0 | 965 |
MS.gene89956.t1 | MTR_4g055990 | 95.825 | 479 | 20 | 0 | 1 | 479 | 1 | 479 | 0.0 | 922 |
MS.gene89956.t1 | MTR_4g055580 | 84.507 | 497 | 71 | 2 | 1 | 497 | 92 | 582 | 0.0 | 819 |
MS.gene89956.t1 | MTR_4g056020 | 81.437 | 501 | 51 | 3 | 1 | 501 | 1 | 459 | 0.0 | 795 |
MS.gene89956.t1 | MTR_4g056040 | 80.167 | 479 | 83 | 3 | 1 | 479 | 1 | 467 | 0.0 | 759 |
MS.gene89956.t1 | MTR_4g056030 | 76.016 | 492 | 76 | 3 | 1 | 492 | 1 | 450 | 0.0 | 727 |
MS.gene89956.t1 | MTR_4g056070 | 82.127 | 442 | 71 | 2 | 1 | 439 | 1 | 437 | 0.0 | 723 |
MS.gene89956.t1 | MTR_1g038710 | 63.265 | 490 | 130 | 6 | 1 | 484 | 11 | 456 | 0.0 | 553 |
MS.gene89956.t1 | MTR_1g090883 | 59.033 | 393 | 120 | 5 | 2 | 392 | 12 | 365 | 1.36e-143 | 417 |
MS.gene89956.t1 | MTR_7g110920 | 56.425 | 358 | 104 | 5 | 136 | 479 | 1 | 320 | 8.88e-121 | 357 |
MS.gene89956.t1 | MTR_4g056020 | 82.738 | 168 | 24 | 1 | 334 | 501 | 1 | 163 | 5.98e-92 | 277 |
MS.gene89956.t1 | MTR_4g093690 | 49.515 | 309 | 110 | 7 | 1 | 305 | 10 | 276 | 1.68e-76 | 242 |
MS.gene89956.t1 | MTR_4g056010 | 91.000 | 100 | 9 | 0 | 105 | 204 | 1 | 100 | 1.60e-57 | 186 |
MS.gene89956.t1 | MTR_1g090900 | 53.271 | 214 | 60 | 4 | 1 | 211 | 1 | 177 | 8.29e-55 | 182 |
MS.gene89956.t1 | MTR_1g090890 | 63.333 | 90 | 27 | 2 | 393 | 479 | 30 | 116 | 2.46e-29 | 112 |
MS.gene89956.t1 | MTR_5g084070 | 27.812 | 489 | 273 | 15 | 5 | 481 | 9 | 429 | 7.15e-27 | 113 |
MS.gene89956.t1 | MTR_4g032730 | 29.191 | 507 | 253 | 25 | 9 | 471 | 15 | 459 | 6.44e-26 | 110 |
MS.gene89956.t1 | MTR_8g062270 | 28.070 | 456 | 270 | 16 | 9 | 453 | 16 | 424 | 2.15e-23 | 103 |
MS.gene89956.t1 | MTR_7g056433 | 27.352 | 457 | 218 | 18 | 4 | 453 | 7 | 356 | 4.24e-23 | 101 |
MS.gene89956.t1 | MTR_8g467800 | 29.322 | 457 | 244 | 18 | 5 | 442 | 16 | 412 | 2.28e-22 | 100 |
MS.gene89956.t1 | MTR_8g014260 | 26.347 | 501 | 271 | 15 | 6 | 476 | 13 | 445 | 4.12e-22 | 99.4 |
MS.gene89956.t1 | MTR_5g080710 | 27.790 | 457 | 259 | 14 | 9 | 458 | 33 | 425 | 4.51e-22 | 99.4 |
MS.gene89956.t1 | MTR_2g007400 | 25.662 | 491 | 249 | 20 | 9 | 482 | 12 | 403 | 2.67e-21 | 96.3 |
MS.gene89956.t1 | MTR_8g445780 | 26.984 | 441 | 247 | 12 | 9 | 438 | 13 | 389 | 8.33e-21 | 94.7 |
MS.gene89956.t1 | MTR_8g058970 | 26.939 | 490 | 282 | 21 | 4 | 465 | 14 | 455 | 1.48e-20 | 94.7 |
MS.gene89956.t1 | MTR_8g014160 | 26.653 | 484 | 242 | 19 | 4 | 475 | 36 | 418 | 2.42e-20 | 93.6 |
MS.gene89956.t1 | MTR_2g083840 | 27.637 | 474 | 271 | 16 | 9 | 467 | 21 | 437 | 8.55e-19 | 89.4 |
MS.gene89956.t1 | MTR_3g108560 | 27.632 | 456 | 206 | 20 | 6 | 453 | 17 | 356 | 1.04e-18 | 88.6 |
MS.gene89956.t1 | MTR_8g468810 | 26.809 | 470 | 263 | 17 | 4 | 453 | 20 | 428 | 1.26e-18 | 89.0 |
MS.gene89956.t1 | MTR_8g468840 | 26.237 | 465 | 267 | 18 | 8 | 453 | 13 | 420 | 9.06e-18 | 86.3 |
MS.gene89956.t1 | MTR_4g080773 | 27.484 | 473 | 267 | 21 | 6 | 453 | 13 | 434 | 2.96e-16 | 81.6 |
MS.gene89956.t1 | MTR_4g080773 | 27.484 | 473 | 267 | 21 | 6 | 453 | 13 | 434 | 4.15e-16 | 81.3 |
MS.gene89956.t1 | MTR_8g467800 | 30.321 | 343 | 172 | 12 | 5 | 331 | 16 | 307 | 7.08e-16 | 79.3 |
MS.gene89956.t1 | MTR_8g058965 | 25.895 | 475 | 260 | 16 | 9 | 454 | 13 | 424 | 6.89e-15 | 77.4 |
MS.gene89956.t1 | MTR_8g468810 | 28.235 | 340 | 178 | 13 | 4 | 327 | 20 | 309 | 8.78e-15 | 75.9 |
MS.gene89956.t1 | MTR_8g468810 | 28.235 | 340 | 178 | 13 | 4 | 327 | 20 | 309 | 1.06e-14 | 75.5 |
MS.gene89956.t1 | MTR_8g468810 | 28.235 | 340 | 178 | 13 | 4 | 327 | 20 | 309 | 1.49e-14 | 75.5 |
MS.gene89956.t1 | MTR_4g039440 | 25.053 | 475 | 238 | 20 | 9 | 476 | 34 | 397 | 1.70e-14 | 75.9 |
MS.gene89956.t1 | MTR_1g053025 | 23.739 | 476 | 259 | 17 | 9 | 475 | 2 | 382 | 2.13e-14 | 75.5 |
MS.gene89956.t1 | MTR_3g048290 | 25.105 | 474 | 270 | 17 | 5 | 453 | 19 | 432 | 3.29e-14 | 75.1 |
MS.gene89956.t1 | MTR_8g468810 | 28.235 | 340 | 178 | 13 | 4 | 327 | 20 | 309 | 3.78e-14 | 74.3 |
MS.gene89956.t1 | MTR_3g109982 | 25.403 | 496 | 263 | 18 | 4 | 453 | 8 | 442 | 3.93e-14 | 75.5 |
MS.gene89956.t1 | MTR_7g115270 | 29.565 | 230 | 113 | 8 | 9 | 230 | 12 | 200 | 2.21e-13 | 72.4 |
MS.gene89956.t1 | MTR_2g005990 | 28.879 | 232 | 122 | 7 | 9 | 232 | 6 | 202 | 3.46e-13 | 71.6 |
MS.gene89956.t1 | MTR_4g080787 | 25.506 | 494 | 275 | 22 | 6 | 469 | 13 | 443 | 1.97e-12 | 69.7 |
MS.gene89956.t1 | MTR_6g044572 | 30.213 | 235 | 129 | 10 | 9 | 232 | 2 | 212 | 6.11e-12 | 67.8 |
MS.gene89956.t1 | MTR_5g008950 | 32.432 | 111 | 65 | 2 | 348 | 455 | 233 | 336 | 7.20e-12 | 67.4 |
MS.gene89956.t1 | MTR_6g044560 | 30.213 | 235 | 129 | 10 | 9 | 232 | 178 | 388 | 7.98e-12 | 68.2 |
MS.gene89956.t1 | MTR_5g045170 | 29.911 | 224 | 109 | 9 | 11 | 230 | 16 | 195 | 1.21e-11 | 67.0 |
MS.gene89956.t1 | MTR_5g039950 | 24.348 | 460 | 238 | 17 | 9 | 453 | 23 | 387 | 4.27e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89956.t1 | AT2G26860 | 29.360 | 453 | 262 | 16 | 9 | 457 | 2 | 400 | 1.92e-26 | 111 |
MS.gene89956.t1 | AT2G26860 | 29.360 | 453 | 262 | 16 | 9 | 457 | 2 | 400 | 1.92e-26 | 111 |
MS.gene89956.t1 | AT5G62970 | 31.613 | 465 | 253 | 26 | 9 | 457 | 2 | 417 | 5.19e-26 | 110 |
MS.gene89956.t1 | AT5G38396 | 27.789 | 475 | 261 | 18 | 9 | 454 | 2 | 423 | 6.98e-25 | 107 |
MS.gene89956.t1 | AT3G59160 | 27.184 | 412 | 228 | 15 | 9 | 382 | 13 | 390 | 7.58e-25 | 107 |
MS.gene89956.t1 | AT3G59190 | 28.928 | 401 | 220 | 13 | 9 | 385 | 12 | 371 | 1.02e-24 | 106 |
MS.gene89956.t1 | AT4G14103 | 28.910 | 422 | 218 | 16 | 9 | 401 | 8 | 376 | 1.41e-24 | 106 |
MS.gene89956.t1 | AT4G00320 | 28.218 | 404 | 227 | 12 | 3 | 382 | 7 | 371 | 1.79e-24 | 107 |
MS.gene89956.t1 | AT3G59190 | 29.064 | 406 | 222 | 14 | 9 | 390 | 12 | 375 | 3.41e-24 | 106 |
MS.gene89956.t1 | AT5G56380 | 28.261 | 460 | 235 | 19 | 9 | 441 | 2 | 393 | 8.57e-24 | 104 |
MS.gene89956.t1 | AT5G56380 | 28.261 | 460 | 235 | 19 | 9 | 441 | 2 | 393 | 8.57e-24 | 104 |
MS.gene89956.t1 | AT3G50710 | 27.991 | 468 | 247 | 16 | 9 | 458 | 2 | 397 | 8.65e-24 | 103 |
MS.gene89956.t1 | AT4G10400 | 26.754 | 456 | 244 | 15 | 9 | 453 | 2 | 378 | 9.18e-24 | 103 |
MS.gene89956.t1 | AT4G10400 | 26.754 | 456 | 244 | 15 | 9 | 453 | 2 | 378 | 9.18e-24 | 103 |
MS.gene89956.t1 | AT4G10400 | 26.754 | 456 | 244 | 15 | 9 | 453 | 2 | 378 | 9.18e-24 | 103 |
MS.gene89956.t1 | AT4G14103 | 28.463 | 397 | 208 | 14 | 9 | 381 | 8 | 352 | 2.25e-23 | 102 |
MS.gene89956.t1 | AT4G14103 | 28.463 | 397 | 208 | 14 | 9 | 381 | 8 | 352 | 2.25e-23 | 102 |
MS.gene89956.t1 | AT4G00315 | 27.992 | 493 | 245 | 23 | 9 | 464 | 2 | 421 | 2.50e-23 | 102 |
MS.gene89956.t1 | AT5G41830 | 27.570 | 428 | 236 | 14 | 3 | 403 | 7 | 387 | 5.10e-23 | 102 |
MS.gene89956.t1 | AT4G26340 | 26.739 | 460 | 246 | 18 | 9 | 452 | 2 | 386 | 7.69e-23 | 101 |
MS.gene89956.t1 | AT4G14096 | 27.143 | 420 | 224 | 16 | 8 | 401 | 7 | 370 | 3.67e-22 | 99.8 |
MS.gene89956.t1 | AT4G14096 | 27.143 | 420 | 224 | 16 | 8 | 401 | 7 | 370 | 3.67e-22 | 99.8 |
MS.gene89956.t1 | AT4G13965 | 27.682 | 466 | 250 | 22 | 9 | 461 | 10 | 401 | 2.35e-21 | 96.7 |
MS.gene89956.t1 | AT1G55660 | 27.137 | 468 | 259 | 22 | 9 | 454 | 53 | 460 | 2.37e-21 | 97.4 |
MS.gene89956.t1 | AT1G58310 | 28.676 | 408 | 217 | 17 | 9 | 382 | 8 | 375 | 2.85e-21 | 97.4 |
MS.gene89956.t1 | AT5G60610 | 28.384 | 458 | 242 | 18 | 9 | 453 | 2 | 386 | 2.95e-21 | 95.9 |
MS.gene89956.t1 | AT5G60610 | 28.384 | 458 | 242 | 18 | 9 | 453 | 2 | 386 | 2.95e-21 | 95.9 |
MS.gene89956.t1 | AT3G59170 | 28.087 | 413 | 226 | 15 | 9 | 382 | 7 | 387 | 5.35e-21 | 96.3 |
MS.gene89956.t1 | AT5G41840 | 27.561 | 410 | 223 | 11 | 9 | 383 | 14 | 384 | 5.98e-21 | 96.3 |
MS.gene89956.t1 | AT3G59230 | 26.535 | 505 | 273 | 17 | 9 | 473 | 12 | 458 | 9.23e-21 | 95.5 |
MS.gene89956.t1 | AT4G13960 | 26.151 | 478 | 258 | 16 | 9 | 454 | 2 | 416 | 3.88e-20 | 93.6 |
MS.gene89956.t1 | AT4G13960 | 26.151 | 478 | 258 | 16 | 9 | 454 | 2 | 416 | 3.88e-20 | 93.6 |
MS.gene89956.t1 | AT5G38590 | 26.201 | 458 | 253 | 15 | 9 | 455 | 2 | 385 | 7.22e-20 | 92.0 |
MS.gene89956.t1 | AT1G32375 | 26.947 | 475 | 252 | 19 | 9 | 465 | 2 | 399 | 9.54e-20 | 92.0 |
MS.gene89956.t1 | AT1G32375 | 26.947 | 475 | 252 | 19 | 9 | 465 | 2 | 399 | 9.54e-20 | 92.0 |
MS.gene89956.t1 | AT3G03030 | 27.711 | 415 | 225 | 13 | 9 | 390 | 2 | 374 | 1.12e-19 | 92.0 |
MS.gene89956.t1 | AT3G58880 | 25.909 | 440 | 257 | 13 | 9 | 427 | 3 | 394 | 1.46e-19 | 91.7 |
MS.gene89956.t1 | AT3G58920 | 27.407 | 405 | 223 | 14 | 9 | 383 | 2 | 365 | 1.75e-19 | 91.7 |
MS.gene89956.t1 | AT4G22280 | 28.974 | 390 | 205 | 13 | 9 | 385 | 2 | 332 | 2.66e-19 | 89.4 |
MS.gene89956.t1 | AT4G00160 | 28.855 | 454 | 253 | 18 | 9 | 455 | 16 | 406 | 2.67e-19 | 90.9 |
MS.gene89956.t1 | AT4G22280 | 28.392 | 398 | 213 | 13 | 9 | 393 | 2 | 340 | 3.06e-19 | 90.5 |
MS.gene89956.t1 | AT2G26030 | 25.745 | 470 | 260 | 18 | 9 | 451 | 4 | 411 | 4.61e-19 | 90.1 |
MS.gene89956.t1 | AT5G56400 | 25.957 | 470 | 241 | 21 | 9 | 453 | 33 | 420 | 5.43e-19 | 90.1 |
MS.gene89956.t1 | AT3G59210 | 29.000 | 400 | 217 | 14 | 5 | 382 | 3 | 357 | 7.53e-19 | 89.7 |
MS.gene89956.t1 | AT3G59210 | 29.000 | 400 | 217 | 14 | 5 | 382 | 3 | 357 | 7.53e-19 | 89.7 |
MS.gene89956.t1 | AT3G59210 | 29.000 | 400 | 217 | 14 | 5 | 382 | 3 | 357 | 7.53e-19 | 89.7 |
MS.gene89956.t1 | AT3G59210 | 29.000 | 400 | 217 | 14 | 5 | 382 | 3 | 357 | 7.53e-19 | 89.7 |
MS.gene89956.t1 | AT3G59210 | 29.000 | 400 | 217 | 14 | 5 | 382 | 3 | 357 | 7.53e-19 | 89.7 |
MS.gene89956.t1 | AT4G26350 | 23.983 | 467 | 262 | 16 | 9 | 454 | 2 | 396 | 8.24e-19 | 89.4 |
MS.gene89956.t1 | AT3G58960 | 26.988 | 415 | 200 | 15 | 9 | 384 | 2 | 352 | 1.06e-18 | 89.4 |
MS.gene89956.t1 | AT5G56370 | 27.824 | 478 | 261 | 20 | 9 | 477 | 2 | 404 | 1.07e-18 | 88.6 |
MS.gene89956.t1 | AT5G56370 | 27.824 | 478 | 261 | 20 | 9 | 477 | 2 | 404 | 1.07e-18 | 88.6 |
MS.gene89956.t1 | AT3G59200 | 26.570 | 414 | 214 | 13 | 8 | 385 | 6 | 365 | 1.13e-18 | 88.2 |
MS.gene89956.t1 | AT2G04230 | 25.956 | 497 | 279 | 18 | 8 | 483 | 12 | 440 | 2.17e-18 | 88.2 |
MS.gene89956.t1 | AT3G58860 | 26.786 | 448 | 260 | 15 | 6 | 437 | 4 | 399 | 3.39e-18 | 87.4 |
MS.gene89956.t1 | AT3G52680 | 27.292 | 469 | 239 | 17 | 9 | 455 | 21 | 409 | 6.52e-18 | 86.7 |
MS.gene89956.t1 | AT3G03040 | 27.068 | 399 | 220 | 10 | 9 | 381 | 2 | 355 | 7.03e-18 | 86.7 |
MS.gene89956.t1 | AT3G59200 | 25.778 | 450 | 237 | 14 | 8 | 421 | 6 | 394 | 7.05e-18 | 87.0 |
MS.gene89956.t1 | AT3G62430 | 27.665 | 394 | 212 | 14 | 9 | 383 | 2 | 341 | 2.12e-17 | 85.1 |
MS.gene89956.t1 | AT1G52650 | 26.337 | 486 | 246 | 19 | 9 | 453 | 2 | 416 | 3.26e-17 | 84.7 |
MS.gene89956.t1 | AT3G42770 | 30.909 | 330 | 174 | 13 | 14 | 331 | 4 | 291 | 3.39e-17 | 84.7 |
MS.gene89956.t1 | AT3G26930 | 26.754 | 456 | 250 | 17 | 8 | 451 | 20 | 403 | 4.44e-17 | 84.0 |
MS.gene89956.t1 | AT4G10420 | 27.195 | 353 | 206 | 11 | 136 | 475 | 1 | 315 | 5.22e-17 | 82.4 |
MS.gene89956.t1 | AT1G78760 | 27.143 | 490 | 238 | 20 | 7 | 461 | 14 | 419 | 5.71e-17 | 83.6 |
MS.gene89956.t1 | AT1G06630 | 30.102 | 392 | 211 | 17 | 8 | 385 | 11 | 353 | 1.24e-16 | 81.6 |
MS.gene89956.t1 | AT1G06630 | 30.102 | 392 | 211 | 17 | 8 | 385 | 11 | 353 | 1.24e-16 | 81.6 |
MS.gene89956.t1 | AT3G59180 | 28.232 | 379 | 211 | 17 | 101 | 436 | 33 | 393 | 1.27e-16 | 82.8 |
MS.gene89956.t1 | AT1G51370 | 27.209 | 430 | 233 | 17 | 7 | 426 | 17 | 376 | 2.35e-16 | 81.6 |
MS.gene89956.t1 | AT5G44490 | 26.316 | 475 | 260 | 18 | 4 | 453 | 12 | 421 | 2.52e-16 | 82.0 |
MS.gene89956.t1 | AT5G53840 | 26.850 | 473 | 238 | 23 | 7 | 453 | 16 | 406 | 2.60e-16 | 81.6 |
MS.gene89956.t1 | AT5G44490 | 26.316 | 475 | 260 | 18 | 4 | 453 | 12 | 421 | 2.70e-16 | 81.6 |
MS.gene89956.t1 | AT3G03030 | 28.329 | 353 | 187 | 11 | 9 | 333 | 2 | 316 | 2.96e-16 | 80.5 |
MS.gene89956.t1 | AT3G49030 | 26.709 | 468 | 261 | 18 | 7 | 464 | 19 | 414 | 2.99e-16 | 81.3 |
MS.gene89956.t1 | AT1G51370 | 31.739 | 230 | 106 | 8 | 7 | 235 | 17 | 196 | 6.12e-16 | 79.7 |
MS.gene89956.t1 | AT3G26930 | 26.402 | 428 | 231 | 17 | 36 | 451 | 3 | 358 | 7.77e-16 | 80.1 |
MS.gene89956.t1 | AT1G55660 | 28.190 | 337 | 177 | 15 | 9 | 327 | 53 | 342 | 8.53e-16 | 79.3 |
MS.gene89956.t1 | AT5G53635 | 25.806 | 496 | 251 | 21 | 11 | 464 | 2 | 422 | 1.14e-15 | 79.7 |
MS.gene89956.t1 | AT3G59240 | 25.255 | 392 | 229 | 12 | 9 | 383 | 8 | 352 | 1.31e-15 | 79.7 |
MS.gene89956.t1 | AT3G58900 | 28.500 | 400 | 218 | 13 | 9 | 383 | 2 | 358 | 1.40e-15 | 79.3 |
MS.gene89956.t1 | AT5G56410 | 28.243 | 478 | 270 | 25 | 9 | 467 | 2 | 425 | 1.74e-15 | 79.3 |
MS.gene89956.t1 | AT2G42720 | 28.979 | 421 | 196 | 19 | 9 | 390 | 2 | 358 | 2.70e-15 | 78.6 |
MS.gene89956.t1 | AT2G29930 | 28.321 | 399 | 199 | 17 | 9 | 383 | 12 | 347 | 3.21e-15 | 78.2 |
MS.gene89956.t1 | AT2G29930 | 28.321 | 399 | 199 | 17 | 9 | 383 | 12 | 347 | 3.21e-15 | 78.2 |
MS.gene89956.t1 | AT1G16930 | 26.752 | 471 | 246 | 22 | 9 | 454 | 15 | 411 | 4.06e-15 | 77.8 |
MS.gene89956.t1 | AT1G16930 | 26.752 | 471 | 246 | 22 | 9 | 454 | 15 | 411 | 4.06e-15 | 77.8 |
MS.gene89956.t1 | AT1G16930 | 26.752 | 471 | 246 | 22 | 9 | 454 | 15 | 411 | 4.06e-15 | 77.8 |
MS.gene89956.t1 | AT4G13985 | 26.980 | 404 | 237 | 15 | 4 | 391 | 14 | 375 | 5.33e-15 | 77.8 |
MS.gene89956.t1 | AT1G66300 | 26.181 | 508 | 267 | 22 | 3 | 475 | 15 | 449 | 7.81e-15 | 77.0 |
MS.gene89956.t1 | AT5G27750 | 25.361 | 485 | 257 | 23 | 9 | 453 | 5 | 424 | 1.13e-14 | 76.6 |
MS.gene89956.t1 | AT5G18770 | 25.000 | 512 | 301 | 18 | 9 | 496 | 24 | 476 | 1.73e-14 | 76.3 |
MS.gene89956.t1 | AT1G66310 | 26.358 | 497 | 266 | 21 | 4 | 475 | 14 | 435 | 3.17e-14 | 75.1 |
MS.gene89956.t1 | AT1G78750 | 25.436 | 401 | 225 | 16 | 9 | 384 | 18 | 369 | 3.42e-14 | 75.1 |
MS.gene89956.t1 | AT1G78750 | 25.436 | 401 | 225 | 16 | 9 | 384 | 18 | 369 | 3.42e-14 | 75.1 |
MS.gene89956.t1 | AT2G42730 | 25.696 | 467 | 272 | 16 | 9 | 453 | 5 | 418 | 3.44e-14 | 75.1 |
MS.gene89956.t1 | AT5G56820 | 23.926 | 489 | 270 | 19 | 9 | 484 | 15 | 414 | 3.75e-14 | 75.1 |
MS.gene89956.t1 | AT5G22700 | 25.156 | 481 | 243 | 21 | 7 | 450 | 41 | 441 | 4.24e-14 | 75.1 |
MS.gene89956.t1 | AT5G22700 | 25.470 | 479 | 244 | 21 | 7 | 450 | 4 | 404 | 4.48e-14 | 74.7 |
MS.gene89956.t1 | AT5G22700 | 25.470 | 479 | 244 | 21 | 7 | 450 | 4 | 404 | 4.48e-14 | 74.7 |
MS.gene89956.t1 | AT5G22700 | 25.470 | 479 | 244 | 21 | 7 | 450 | 4 | 404 | 4.48e-14 | 74.7 |
MS.gene89956.t1 | AT5G22700 | 25.470 | 479 | 244 | 21 | 7 | 450 | 4 | 404 | 4.48e-14 | 74.7 |
MS.gene89956.t1 | AT5G25860 | 26.585 | 410 | 223 | 17 | 9 | 390 | 12 | 371 | 7.84e-14 | 73.9 |
MS.gene89956.t1 | AT1G69630 | 26.420 | 405 | 221 | 14 | 2 | 383 | 11 | 361 | 8.58e-14 | 73.9 |
MS.gene89956.t1 | AT1G05080 | 26.923 | 468 | 249 | 22 | 8 | 453 | 12 | 408 | 2.52e-13 | 72.4 |
MS.gene89956.t1 | AT3G26920 | 24.242 | 363 | 234 | 12 | 128 | 477 | 4 | 338 | 7.95e-13 | 70.1 |
MS.gene89956.t1 | AT3G26920 | 24.242 | 363 | 234 | 12 | 128 | 477 | 4 | 338 | 7.95e-13 | 70.1 |
MS.gene89956.t1 | AT5G15620 | 26.601 | 406 | 221 | 13 | 9 | 393 | 2 | 351 | 1.27e-12 | 70.1 |
MS.gene89956.t1 | AT1G13780 | 24.101 | 473 | 267 | 20 | 9 | 451 | 10 | 420 | 1.33e-12 | 70.1 |
MS.gene89956.t1 | AT3G58900 | 28.693 | 352 | 187 | 12 | 9 | 335 | 2 | 314 | 1.41e-12 | 68.9 |
MS.gene89956.t1 | AT4G09920 | 26.284 | 331 | 186 | 11 | 9 | 332 | 2 | 281 | 1.53e-12 | 68.9 |
MS.gene89956.t1 | AT4G09920 | 26.284 | 331 | 186 | 11 | 9 | 332 | 2 | 281 | 1.53e-12 | 68.9 |
MS.gene89956.t1 | AT3G58900 | 29.050 | 358 | 184 | 13 | 9 | 337 | 2 | 318 | 1.60e-12 | 68.9 |
MS.gene89956.t1 | AT3G58900 | 29.050 | 358 | 184 | 13 | 9 | 337 | 2 | 318 | 1.60e-12 | 68.9 |
MS.gene89956.t1 | AT5G56390 | 27.564 | 312 | 179 | 11 | 157 | 456 | 119 | 395 | 1.83e-12 | 69.7 |
MS.gene89956.t1 | AT1G48400 | 24.943 | 437 | 221 | 14 | 9 | 390 | 10 | 394 | 2.74e-12 | 69.3 |
MS.gene89956.t1 | AT5G38392 | 31.950 | 241 | 109 | 10 | 9 | 236 | 2 | 200 | 2.76e-12 | 66.6 |
MS.gene89956.t1 | AT2G29930 | 33.878 | 245 | 106 | 14 | 163 | 383 | 15 | 227 | 4.31e-12 | 67.8 |
MS.gene89956.t1 | AT4G09920 | 29.075 | 227 | 114 | 6 | 9 | 232 | 2 | 184 | 5.58e-12 | 67.0 |
MS.gene89956.t1 | AT4G09920 | 29.075 | 227 | 114 | 6 | 9 | 232 | 2 | 184 | 5.58e-12 | 67.0 |
MS.gene89956.t1 | AT4G09920 | 29.075 | 227 | 114 | 6 | 9 | 232 | 2 | 184 | 5.58e-12 | 67.0 |
MS.gene89956.t1 | AT5G35995 | 24.755 | 408 | 225 | 16 | 8 | 390 | 4 | 354 | 1.28e-11 | 67.0 |
MS.gene89956.t1 | AT5G35995 | 24.755 | 408 | 225 | 16 | 8 | 390 | 4 | 354 | 1.28e-11 | 67.0 |
MS.gene89956.t1 | AT1G66290 | 25.263 | 475 | 253 | 20 | 4 | 453 | 24 | 421 | 2.52e-11 | 66.2 |
MS.gene89956.t1 | AT3G54160 | 27.667 | 300 | 181 | 10 | 104 | 383 | 47 | 330 | 4.16e-11 | 65.5 |
MS.gene89956.t1 | AT5G22700 | 28.879 | 232 | 104 | 9 | 7 | 230 | 41 | 219 | 4.38e-11 | 65.5 |
MS.gene89956.t1 | AT5G56810 | 26.016 | 492 | 269 | 20 | 9 | 478 | 15 | 433 | 4.94e-11 | 65.1 |
MS.gene89956.t1 | AT1G66320 | 28.289 | 304 | 167 | 15 | 108 | 383 | 91 | 371 | 8.76e-11 | 64.3 |
MS.gene89956.t1 | AT5G25850 | 30.043 | 233 | 94 | 8 | 9 | 230 | 20 | 194 | 9.34e-11 | 64.3 |
Find 93 sgRNAs with CRISPR-Local
Find 129 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCATTACATTTGAATTTAA+AGG | 0.124626 | 4.2:+47690805 | MS.gene89956:CDS |
TAAAGATTTGATTTCTTCTT+TGG | 0.180797 | 4.2:-47689326 | None:intergenic |
AGAAATCCTCCTTACTAGTA+TGG | 0.246783 | 4.2:+47690962 | MS.gene89956:CDS |
CTAAGGCTTGATAGCGAAAA+AGG | 0.263082 | 4.2:+47689496 | MS.gene89956:CDS |
ATTGCAAGATCCTTAAGTTT+TGG | 0.285282 | 4.2:-47690356 | None:intergenic |
CTATATTCTCGTAGCGTCTT+TGG | 0.295013 | 4.2:-47689360 | None:intergenic |
TTGTTATATATGCCTACTTC+TGG | 0.297421 | 4.2:+47689892 | MS.gene89956:CDS |
GCAGATCGACTCCCATCTTT+TGG | 0.302315 | 4.2:-47689248 | None:intergenic |
TCTATCTGGTTGTCCACATT+TGG | 0.307537 | 4.2:+47689795 | MS.gene89956:CDS |
TAATTCAATTGAAGATCATT+TGG | 0.321337 | 4.2:+47691354 | MS.gene89956:CDS |
AGTGGTCTTCATTGAAATCT+TGG | 0.325383 | 4.2:-47691383 | None:intergenic |
TATATTCTCGTAGCGTCTTT+GGG | 0.345443 | 4.2:-47689359 | None:intergenic |
GTTTCCAACCTCCTCTCTTC+GGG | 0.354469 | 4.2:-47690734 | None:intergenic |
AGTTTCCAACCTCCTCTCTT+CGG | 0.390900 | 4.2:-47690735 | None:intergenic |
ACTCGTGGTCTTAAAATTGC+GGG | 0.408358 | 4.2:+47689645 | MS.gene89956:CDS |
AAAGTGAAGGTTGGGAATCT+TGG | 0.417455 | 4.2:-47689272 | None:intergenic |
ACAGATCCAAGTCAAGTTCC+TGG | 0.422138 | 4.2:-47689573 | None:intergenic |
ACAGAATGCTCCAAAACTTA+AGG | 0.424972 | 4.2:+47690346 | MS.gene89956:CDS |
ATCTGGTTGTCCACATTTGG+AGG | 0.433975 | 4.2:+47689798 | MS.gene89956:CDS |
CAAAGACGCTACGAGAATAT+AGG | 0.436114 | 4.2:+47689361 | MS.gene89956:CDS |
AGGAGGTTGGAAACTCTAGA+TGG | 0.436425 | 4.2:+47690743 | MS.gene89956:CDS |
GGTAATTGAAAGTGAAGGTT+GGG | 0.443422 | 4.2:-47689280 | None:intergenic |
CAAGGTCCAGGAACTTGACT+TGG | 0.457085 | 4.2:+47689567 | MS.gene89956:CDS |
ATTTCTTCTTTGGACATCAC+GGG | 0.458271 | 4.2:-47689316 | None:intergenic |
ACTAATACTTGACAGTAAGA+TGG | 0.466673 | 4.2:+47689387 | MS.gene89956:CDS |
AAATTCAAATGTAATGAGAC+TGG | 0.466724 | 4.2:-47690800 | None:intergenic |
CATGTGTTCTATCCAAAAGA+TGG | 0.467948 | 4.2:+47689236 | MS.gene89956:CDS |
GTGACTCACACGTGGAAAGC+TGG | 0.470578 | 4.2:-47689624 | None:intergenic |
TCAAAACATTAAAACTGAGT+TGG | 0.477665 | 4.2:+47690831 | MS.gene89956:CDS |
GTATACAAATTGTTAAAATC+CGG | 0.478212 | 4.2:-47690054 | None:intergenic |
TCTTTGCATTTGCAAGCGTC+CGG | 0.481989 | 4.2:+47690035 | MS.gene89956:CDS |
GCCACATGATGTACACTTGT+GGG | 0.485379 | 4.2:+47689417 | MS.gene89956:CDS |
AAGGATCTTGCAATTGCGGT+TGG | 0.485603 | 4.2:+47690365 | MS.gene89956:CDS |
AAGTAGGCATATATAACAAA+AGG | 0.493857 | 4.2:-47689888 | None:intergenic |
ACTTAAGGATCTTGCAATTG+CGG | 0.496044 | 4.2:+47690361 | MS.gene89956:CDS |
GGCATTAGATCTCAAGGTCC+AGG | 0.496808 | 4.2:+47689555 | MS.gene89956:CDS |
AATTTGTATACACTCTTGAA+AGG | 0.500652 | 4.2:+47690066 | MS.gene89956:CDS |
TGTACACTTGTGGGTTTCAA+AGG | 0.503354 | 4.2:+47689426 | MS.gene89956:CDS |
CTAATACTTGACAGTAAGAT+GGG | 0.504263 | 4.2:+47689388 | MS.gene89956:CDS |
TAGAATACGCCACAGTTTCA+CGG | 0.516230 | 4.2:-47689735 | None:intergenic |
GAAATCCTCCTTACTAGTAT+GGG | 0.519980 | 4.2:+47690963 | MS.gene89956:CDS |
ACTTCGTACCCATACTAGTA+AGG | 0.520038 | 4.2:-47690971 | None:intergenic |
CTGAAAATATAAGAAAACTA+AGG | 0.523473 | 4.2:+47689479 | MS.gene89956:CDS |
ATCACGGGGTCTGAAATCTC+TGG | 0.527272 | 4.2:-47689301 | None:intergenic |
TGTACACATGTGGGTTTCAA+AGG | 0.528762 | 4.2:+47689534 | MS.gene89956:CDS |
GATTTCTTCTTTGGACATCA+CGG | 0.535967 | 4.2:-47689317 | None:intergenic |
TATGAAGAACTTCAAGTGAC+GGG | 0.536432 | 4.2:-47689945 | None:intergenic |
TCTCTTCAATAAGTGAAAAG+AGG | 0.537636 | 4.2:-47689860 | None:intergenic |
CACTCGTGGTCTTAAAATTG+CGG | 0.539007 | 4.2:+47689644 | MS.gene89956:CDS |
TTCAAAGGCATTAGATCTCA+AGG | 0.542872 | 4.2:+47689549 | MS.gene89956:CDS |
GGTCTTCATTGAAATCTTGG+AGG | 0.543456 | 4.2:-47691380 | None:intergenic |
AATGTCAAAACATTGGCTCT+CGG | 0.545588 | 4.2:+47690096 | MS.gene89956:CDS |
TGGTAATTGAAAGTGAAGGT+TGG | 0.551378 | 4.2:-47689281 | None:intergenic |
TGTTATGCAGTTTCTCAGCA+TGG | 0.553413 | 4.2:+47690220 | MS.gene89956:intron |
TGAAATCAATTCCCGAAGAG+AGG | 0.556742 | 4.2:+47690723 | MS.gene89956:CDS |
ATGTGTTCTATCCAAAAGAT+GGG | 0.563690 | 4.2:+47689237 | MS.gene89956:CDS |
GACGGGGCATTAATTTGTAG+TGG | 0.566180 | 4.2:-47689928 | None:intergenic |
ACTTTCTAATGTCAAAACAT+TGG | 0.567332 | 4.2:+47690089 | MS.gene89956:CDS |
AAATATCTGAGAATTGCAGT+TGG | 0.586019 | 4.2:+47690303 | MS.gene89956:CDS |
TGAAAAGAAGAATTGAGTGT+TGG | 0.588267 | 4.2:-47689679 | None:intergenic |
AGACTGGTTGTAAGACATGC+CGG | 0.589947 | 4.2:-47690784 | None:intergenic |
AAGTGAAAAGAGGTGTTGAT+CGG | 0.590271 | 4.2:-47689850 | None:intergenic |
AAGAGCAGCTTCATCAAGAG+TGG | 0.591791 | 4.2:-47690016 | None:intergenic |
CAACACTTAATACCAGAAGT+AGG | 0.593620 | 4.2:-47689904 | None:intergenic |
GGTGGAGCCATCAGTAACTC+CGG | 0.595318 | 4.2:+47690765 | MS.gene89956:CDS |
TCACACGTGGAAAGCTGGAG+CGG | 0.598731 | 4.2:-47689619 | None:intergenic |
AAAAGAAGTTCCTCCAAATG+TGG | 0.603065 | 4.2:-47689808 | None:intergenic |
ACAAGTGTACATCATGTGGC+TGG | 0.606670 | 4.2:-47689414 | None:intergenic |
ATATGAAGAACTTCAAGTGA+CGG | 0.606749 | 4.2:-47689946 | None:intergenic |
AATTCCCGAAGAGAGGAGGT+TGG | 0.607635 | 4.2:+47690730 | MS.gene89956:CDS |
AGACATGCCGGAGTTACTGA+TGG | 0.614504 | 4.2:-47690772 | None:intergenic |
GGAGGTTGGAAACTCTAGAT+GGG | 0.616468 | 4.2:+47690744 | MS.gene89956:CDS |
TCACTCAAGTAAGTTACAGA+AGG | 0.626299 | 4.2:+47690876 | MS.gene89956:CDS |
TCTTCATCTCCGTGAAACTG+TGG | 0.632446 | 4.2:+47689726 | MS.gene89956:CDS |
AATCAATTCCCGAAGAGAGG+AGG | 0.632647 | 4.2:+47690726 | MS.gene89956:CDS |
TTCCACGTGTGAGTCACTCG+TGG | 0.634670 | 4.2:+47689630 | MS.gene89956:CDS |
GGTTGGAAACTCTAGATGGG+TGG | 0.637888 | 4.2:+47690747 | MS.gene89956:CDS |
GGTGTTGATCGGTAATGCAA+AGG | 0.638827 | 4.2:-47689839 | None:intergenic |
AGCCACATGATGTACACTTG+TGG | 0.639873 | 4.2:+47689416 | MS.gene89956:CDS |
GCGTATTCTATGTTTGATGA+CGG | 0.640607 | 4.2:+47689748 | MS.gene89956:CDS |
ACATGTGTACATCATGTGAC+TGG | 0.652666 | 4.2:-47689522 | None:intergenic |
AGATGAAGAATCTTTAGTGA+CGG | 0.657169 | 4.2:-47689712 | None:intergenic |
GCTAGATTAAGAGGGTTGAG+TGG | 0.662472 | 4.2:-47691401 | None:intergenic |
TTTCTTCTTTGGACATCACG+GGG | 0.666222 | 4.2:-47689315 | None:intergenic |
CTCGTGGTCTTAAAATTGCG+GGG | 0.673910 | 4.2:+47689646 | MS.gene89956:CDS |
TCGTACCCATACTAGTAAGG+AGG | 0.674938 | 4.2:-47690968 | None:intergenic |
GTCACATGATGTACACATGT+GGG | 0.678429 | 4.2:+47689525 | MS.gene89956:CDS |
GACCACGAGTGACTCACACG+TGG | 0.682798 | 4.2:-47689632 | None:intergenic |
ACCCACAAGTGTACATCATG+TGG | 0.692380 | 4.2:-47689418 | None:intergenic |
TCTCTGGTAATTGAAAGTGA+AGG | 0.696256 | 4.2:-47689285 | None:intergenic |
TATGCAGTTTCTCAGCATGG+AGG | 0.703511 | 4.2:+47690223 | MS.gene89956:intron |
AGTCACATGATGTACACATG+TGG | 0.706369 | 4.2:+47689524 | MS.gene89956:CDS |
ATGAAGAACTTCAAGTGACG+GGG | 0.715969 | 4.2:-47689944 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAAATACAAATGTTAATTTT+TGG | + | chr4.2:47690681-47690700 | MS.gene89956:intron | 10.0% |
!!! | GAATTAATTAATTTGTTTAA+CGG | - | chr4.2:47690527-47690546 | None:intergenic | 10.0% |
!! | ATGTAATTAAAAAATTTGAG+AGG | - | chr4.2:47691239-47691258 | None:intergenic | 15.0% |
!!! | AATTATTCAATATTTGTTAC+AGG | + | chr4.2:47691327-47691346 | MS.gene89956:intron | 15.0% |
!! | ACTATATGCTATATATCATT+TGG | + | chr4.2:47690658-47690677 | MS.gene89956:intron | 20.0% |
!! | AGATAAAATTGTAAGTCAAA+TGG | - | chr4.2:47690613-47690632 | None:intergenic | 20.0% |
!! | CTCATTACATTTGAATTTAA+AGG | + | chr4.2:47690805-47690824 | MS.gene89956:CDS | 20.0% |
!! | CTGAAAATATAAGAAAACTA+AGG | + | chr4.2:47689479-47689498 | MS.gene89956:CDS | 20.0% |
!! | GTATACAAATTGTTAAAATC+CGG | - | chr4.2:47690057-47690076 | None:intergenic | 20.0% |
!! | TAATTCAATTGAAGATCATT+TGG | + | chr4.2:47691354-47691373 | MS.gene89956:CDS | 20.0% |
!! | TATATATACAATTACATTCG+TGG | + | chr4.2:47691172-47691191 | MS.gene89956:intron | 20.0% |
!!! | TAAAGATTTGATTTCTTCTT+TGG | - | chr4.2:47689329-47689348 | None:intergenic | 20.0% |
!!! | TTTATGAAGTCATATTTTCT+AGG | - | chr4.2:47689991-47690010 | None:intergenic | 20.0% |
! | AAATTCAAATGTAATGAGAC+TGG | - | chr4.2:47690803-47690822 | None:intergenic | 25.0% |
! | AAGTAGGCATATATAACAAA+AGG | - | chr4.2:47689891-47689910 | None:intergenic | 25.0% |
! | AAGTCAAATGGTTTAAAAGA+AGG | - | chr4.2:47690601-47690620 | None:intergenic | 25.0% |
! | AATGAGAATAGAATTGCATA+TGG | - | chr4.2:47690191-47690210 | None:intergenic | 25.0% |
! | AATTTGTATACACTCTTGAA+AGG | + | chr4.2:47690066-47690085 | MS.gene89956:CDS | 25.0% |
! | ACTTTCTAATGTCAAAACAT+TGG | + | chr4.2:47690089-47690108 | MS.gene89956:CDS | 25.0% |
! | ATGAGAATAGAATTGCATAT+GGG | - | chr4.2:47690190-47690209 | None:intergenic | 25.0% |
! | GGTAGTATGTTAATATTTGT+TGG | + | chr4.2:47691055-47691074 | MS.gene89956:intron | 25.0% |
! | TAAAAGAAGGTTAAATTGCT+AGG | - | chr4.2:47690588-47690607 | None:intergenic | 25.0% |
! | TCAAAACATTAAAACTGAGT+TGG | + | chr4.2:47690831-47690850 | MS.gene89956:CDS | 25.0% |
!! | GAAAGTATATAAACTCTGTA+TGG | - | chr4.2:47691016-47691035 | None:intergenic | 25.0% |
!! | GATCTCAATAATTTTCTATC+TGG | + | chr4.2:47689781-47689800 | MS.gene89956:CDS | 25.0% |
!! | GTATGTTAATATTTGTTGGT+AGG | + | chr4.2:47691059-47691078 | MS.gene89956:intron | 25.0% |
!! | TATAAGACTCTTTTGTTGAT+AGG | - | chr4.2:47689213-47689232 | None:intergenic | 25.0% |
!!! | TAATTTTTGGTTTACATGCA+GGG | + | chr4.2:47690694-47690713 | MS.gene89956:intron | 25.0% |
!!! | TCTGTTTTAATGAAAAGAGT+GGG | + | chr4.2:47691034-47691053 | MS.gene89956:intron | 25.0% |
!!! | TTAATTTTTGGTTTACATGC+AGG | + | chr4.2:47690693-47690712 | MS.gene89956:intron | 25.0% |
!!! | TTCTGTTTTAATGAAAAGAG+TGG | + | chr4.2:47691033-47691052 | MS.gene89956:intron | 25.0% |
AAATATCTGAGAATTGCAGT+TGG | + | chr4.2:47690303-47690322 | MS.gene89956:CDS | 30.0% | |
AACATAAGAAGCTGAAAATC+TGG | + | chr4.2:47690450-47690469 | MS.gene89956:intron | 30.0% | |
AAGACCTAGTAAAAGATACA+TGG | + | chr4.2:47690486-47690505 | MS.gene89956:intron | 30.0% | |
AAGAGAAGATGAAAGTTCTA+TGG | - | chr4.2:47691099-47691118 | None:intergenic | 30.0% | |
ACTAATACTTGACAGTAAGA+TGG | + | chr4.2:47689387-47689406 | MS.gene89956:CDS | 30.0% | |
AGATGAAGAATCTTTAGTGA+CGG | - | chr4.2:47689715-47689734 | None:intergenic | 30.0% | |
AGTAGAAAAAAGTTTACGCA+AGG | + | chr4.2:47690933-47690952 | MS.gene89956:CDS | 30.0% | |
ATATGAAGAACTTCAAGTGA+CGG | - | chr4.2:47689949-47689968 | None:intergenic | 30.0% | |
ATGTGTTCTATCCAAAAGAT+GGG | + | chr4.2:47689237-47689256 | MS.gene89956:CDS | 30.0% | |
CTAATACTTGACAGTAAGAT+GGG | + | chr4.2:47689388-47689407 | MS.gene89956:CDS | 30.0% | |
GTAGAAAAAAGTTTACGCAA+GGG | + | chr4.2:47690934-47690953 | MS.gene89956:CDS | 30.0% | |
TAGAAAAAAGTTTACGCAAG+GGG | + | chr4.2:47690935-47690954 | MS.gene89956:CDS | 30.0% | |
TCTCTTCAATAAGTGAAAAG+AGG | - | chr4.2:47689863-47689882 | None:intergenic | 30.0% | |
TGAAAAGAAGAATTGAGTGT+TGG | - | chr4.2:47689682-47689701 | None:intergenic | 30.0% | |
TTGTTATATATGCCTACTTC+TGG | + | chr4.2:47689892-47689911 | MS.gene89956:CDS | 30.0% | |
! | AACTCCATGTATCTTTTACT+AGG | - | chr4.2:47690493-47690512 | None:intergenic | 30.0% |
! | ATTGCAAGATCCTTAAGTTT+TGG | - | chr4.2:47690359-47690378 | None:intergenic | 30.0% |
! | TTATATTTTCAGTGCGTCTT+AGG | - | chr4.2:47689471-47689490 | None:intergenic | 30.0% |
AAAAGAAGTTCCTCCAAATG+TGG | - | chr4.2:47689811-47689830 | None:intergenic | 35.0% | |
AAGACATAAAGCTGTGTTGA+TGG | - | chr4.2:47691145-47691164 | None:intergenic | 35.0% | |
ACAGAATGCTCCAAAACTTA+AGG | + | chr4.2:47690346-47690365 | MS.gene89956:CDS | 35.0% | |
ACTTAAGGATCTTGCAATTG+CGG | + | chr4.2:47690361-47690380 | MS.gene89956:CDS | 35.0% | |
AGAAATCCTCCTTACTAGTA+TGG | + | chr4.2:47690962-47690981 | MS.gene89956:CDS | 35.0% | |
AGTGGTCTTCATTGAAATCT+TGG | - | chr4.2:47691386-47691405 | None:intergenic | 35.0% | |
ATTTCTTCTTTGGACATCAC+GGG | - | chr4.2:47689319-47689338 | None:intergenic | 35.0% | |
CAACACTTAATACCAGAAGT+AGG | - | chr4.2:47689907-47689926 | None:intergenic | 35.0% | |
CATGTGTTCTATCCAAAAGA+TGG | + | chr4.2:47689236-47689255 | MS.gene89956:CDS | 35.0% | |
GAAATCCTCCTTACTAGTAT+GGG | + | chr4.2:47690963-47690982 | MS.gene89956:CDS | 35.0% | |
GATTTCTTCTTTGGACATCA+CGG | - | chr4.2:47689320-47689339 | None:intergenic | 35.0% | |
GCGTATTCTATGTTTGATGA+CGG | + | chr4.2:47689748-47689767 | MS.gene89956:CDS | 35.0% | |
GGTAATTGAAAGTGAAGGTT+GGG | - | chr4.2:47689283-47689302 | None:intergenic | 35.0% | |
TATATTCTCGTAGCGTCTTT+GGG | - | chr4.2:47689362-47689381 | None:intergenic | 35.0% | |
TATGAAGAACTTCAAGTGAC+GGG | - | chr4.2:47689948-47689967 | None:intergenic | 35.0% | |
TCACTCAAGTAAGTTACAGA+AGG | + | chr4.2:47690876-47690895 | MS.gene89956:CDS | 35.0% | |
TCTCTGGTAATTGAAAGTGA+AGG | - | chr4.2:47689288-47689307 | None:intergenic | 35.0% | |
TGCATATGGGAGACTAAATA+TGG | - | chr4.2:47690177-47690196 | None:intergenic | 35.0% | |
TGGTAATTGAAAGTGAAGGT+TGG | - | chr4.2:47689284-47689303 | None:intergenic | 35.0% | |
! | ATTTGTTGGTAGGATGTTGT+GGG | + | chr4.2:47691069-47691088 | MS.gene89956:intron | 35.0% |
! | TATTTGTTGGTAGGATGTTG+TGG | + | chr4.2:47691068-47691087 | MS.gene89956:intron | 35.0% |
!! | AAGTGAAAAGAGGTGTTGAT+CGG | - | chr4.2:47689853-47689872 | None:intergenic | 35.0% |
!! | AATGTCAAAACATTGGCTCT+CGG | + | chr4.2:47690096-47690115 | MS.gene89956:CDS | 35.0% |
!! | TTCAAAGGCATTAGATCTCA+AGG | + | chr4.2:47689549-47689568 | MS.gene89956:CDS | 35.0% |
!!! | GCGGCAATAAAACTTTTTCA+TGG | - | chr4.2:47689603-47689622 | None:intergenic | 35.0% |
AAAGTGAAGGTTGGGAATCT+TGG | - | chr4.2:47689275-47689294 | None:intergenic | 40.0% | |
ACATGTGTACATCATGTGAC+TGG | - | chr4.2:47689525-47689544 | None:intergenic | 40.0% | |
ACTTCGTACCCATACTAGTA+AGG | - | chr4.2:47690974-47690993 | None:intergenic | 40.0% | |
AGTCACATGATGTACACATG+TGG | + | chr4.2:47689524-47689543 | MS.gene89956:CDS | 40.0% | |
ATGAAGAACTTCAAGTGACG+GGG | - | chr4.2:47689947-47689966 | None:intergenic | 40.0% | |
CAAAGACGCTACGAGAATAT+AGG | + | chr4.2:47689361-47689380 | MS.gene89956:CDS | 40.0% | |
CTATATTCTCGTAGCGTCTT+TGG | - | chr4.2:47689363-47689382 | None:intergenic | 40.0% | |
GGTCTTCATTGAAATCTTGG+AGG | - | chr4.2:47691383-47691402 | None:intergenic | 40.0% | |
GTCACATGATGTACACATGT+GGG | + | chr4.2:47689525-47689544 | MS.gene89956:CDS | 40.0% | |
TAGAATACGCCACAGTTTCA+CGG | - | chr4.2:47689738-47689757 | None:intergenic | 40.0% | |
TCTATCTGGTTGTCCACATT+TGG | + | chr4.2:47689795-47689814 | MS.gene89956:CDS | 40.0% | |
TGAAATCAATTCCCGAAGAG+AGG | + | chr4.2:47690723-47690742 | MS.gene89956:CDS | 40.0% | |
TGTACACATGTGGGTTTCAA+AGG | + | chr4.2:47689534-47689553 | MS.gene89956:CDS | 40.0% | |
TGTACACTTGTGGGTTTCAA+AGG | + | chr4.2:47689426-47689445 | MS.gene89956:CDS | 40.0% | |
TGTTATGCAGTTTCTCAGCA+TGG | + | chr4.2:47690220-47690239 | MS.gene89956:intron | 40.0% | |
TTTCTTCTTTGGACATCACG+GGG | - | chr4.2:47689318-47689337 | None:intergenic | 40.0% | |
! | ACTCGTGGTCTTAAAATTGC+GGG | + | chr4.2:47689645-47689664 | MS.gene89956:CDS | 40.0% |
! | CACTCGTGGTCTTAAAATTG+CGG | + | chr4.2:47689644-47689663 | MS.gene89956:CDS | 40.0% |
! | TTTGTTGGTAGGATGTTGTG+GGG | + | chr4.2:47691070-47691089 | MS.gene89956:intron | 40.0% |
!! | CATAAAGCTGTGTTGATGGT+CGG | - | chr4.2:47691141-47691160 | None:intergenic | 40.0% |
!! | CTAAGGCTTGATAGCGAAAA+AGG | + | chr4.2:47689496-47689515 | MS.gene89956:CDS | 40.0% |
AAGAGCAGCTTCATCAAGAG+TGG | - | chr4.2:47690019-47690038 | None:intergenic | 45.0% | |
AAGGATCTTGCAATTGCGGT+TGG | + | chr4.2:47690365-47690384 | MS.gene89956:CDS | 45.0% | |
AATCAATTCCCGAAGAGAGG+AGG | + | chr4.2:47690726-47690745 | MS.gene89956:CDS | 45.0% | |
ACAAGTGTACATCATGTGGC+TGG | - | chr4.2:47689417-47689436 | None:intergenic | 45.0% | |
ACAGATCCAAGTCAAGTTCC+TGG | - | chr4.2:47689576-47689595 | None:intergenic | 45.0% | |
ACCCACAAGTGTACATCATG+TGG | - | chr4.2:47689421-47689440 | None:intergenic | 45.0% | |
AGCCACATGATGTACACTTG+TGG | + | chr4.2:47689416-47689435 | MS.gene89956:CDS | 45.0% | |
AGGAGGTTGGAAACTCTAGA+TGG | + | chr4.2:47690743-47690762 | MS.gene89956:CDS | 45.0% | |
AGTTTCCAACCTCCTCTCTT+CGG | - | chr4.2:47690738-47690757 | None:intergenic | 45.0% | |
ATCTGGTTGTCCACATTTGG+AGG | + | chr4.2:47689798-47689817 | MS.gene89956:CDS | 45.0% | |
GCCACATGATGTACACTTGT+GGG | + | chr4.2:47689417-47689436 | MS.gene89956:CDS | 45.0% | |
GGAGGTTGGAAACTCTAGAT+GGG | + | chr4.2:47690744-47690763 | MS.gene89956:CDS | 45.0% | |
TATGCAGTTTCTCAGCATGG+AGG | + | chr4.2:47690223-47690242 | MS.gene89956:intron | 45.0% | |
TCGTACCCATACTAGTAAGG+AGG | - | chr4.2:47690971-47690990 | None:intergenic | 45.0% | |
TCTTCATCTCCGTGAAACTG+TGG | + | chr4.2:47689726-47689745 | MS.gene89956:CDS | 45.0% | |
TCTTTGCATTTGCAAGCGTC+CGG | + | chr4.2:47690035-47690054 | MS.gene89956:CDS | 45.0% | |
! | AGACTGGTTGTAAGACATGC+CGG | - | chr4.2:47690787-47690806 | None:intergenic | 45.0% |
! | CTCGTGGTCTTAAAATTGCG+GGG | + | chr4.2:47689646-47689665 | MS.gene89956:CDS | 45.0% |
!! | GACGGGGCATTAATTTGTAG+TGG | - | chr4.2:47689931-47689950 | None:intergenic | 45.0% |
!! | GGTGTTGATCGGTAATGCAA+AGG | - | chr4.2:47689842-47689861 | None:intergenic | 45.0% |
AATTCCCGAAGAGAGGAGGT+TGG | + | chr4.2:47690730-47690749 | MS.gene89956:CDS | 50.0% | |
AGACATGCCGGAGTTACTGA+TGG | - | chr4.2:47690775-47690794 | None:intergenic | 50.0% | |
CAAGGTCCAGGAACTTGACT+TGG | + | chr4.2:47689567-47689586 | MS.gene89956:CDS | 50.0% | |
GGCATTAGATCTCAAGGTCC+AGG | + | chr4.2:47689555-47689574 | MS.gene89956:CDS | 50.0% | |
GGTTGGAAACTCTAGATGGG+TGG | + | chr4.2:47690747-47690766 | MS.gene89956:CDS | 50.0% | |
GTTTCCAACCTCCTCTCTTC+GGG | - | chr4.2:47690737-47690756 | None:intergenic | 50.0% | |
! | ATCACGGGGTCTGAAATCTC+TGG | - | chr4.2:47689304-47689323 | None:intergenic | 50.0% |
!! | GCAGATCGACTCCCATCTTT+TGG | - | chr4.2:47689251-47689270 | None:intergenic | 50.0% |
GGTGGAGCCATCAGTAACTC+CGG | + | chr4.2:47690765-47690784 | MS.gene89956:CDS | 55.0% | |
GTGACTCACACGTGGAAAGC+TGG | - | chr4.2:47689627-47689646 | None:intergenic | 55.0% | |
TCACACGTGGAAAGCTGGAG+CGG | - | chr4.2:47689622-47689641 | None:intergenic | 55.0% | |
TTCCACGTGTGAGTCACTCG+TGG | + | chr4.2:47689630-47689649 | MS.gene89956:CDS | 55.0% | |
! | GTTGGTAGGATGTTGTGGGG+TGG | + | chr4.2:47691073-47691092 | MS.gene89956:intron | 55.0% |
GACCACGAGTGACTCACACG+TGG | - | chr4.2:47689635-47689654 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 47689136 | 47691417 | 47689136 | ID=MS.gene89956 |
chr4.2 | mRNA | 47689136 | 47691417 | 47689136 | ID=MS.gene89956.t1;Parent=MS.gene89956 |
chr4.2 | exon | 47689136 | 47690134 | 47689136 | ID=MS.gene89956.t1.exon1;Parent=MS.gene89956.t1 |
chr4.2 | CDS | 47689136 | 47690134 | 47689136 | ID=cds.MS.gene89956.t1;Parent=MS.gene89956.t1 |
chr4.2 | exon | 47690230 | 47690397 | 47690230 | ID=MS.gene89956.t1.exon2;Parent=MS.gene89956.t1 |
chr4.2 | CDS | 47690230 | 47690397 | 47690230 | ID=cds.MS.gene89956.t1;Parent=MS.gene89956.t1 |
chr4.2 | exon | 47690715 | 47690984 | 47690715 | ID=MS.gene89956.t1.exon3;Parent=MS.gene89956.t1 |
chr4.2 | CDS | 47690715 | 47690984 | 47690715 | ID=cds.MS.gene89956.t1;Parent=MS.gene89956.t1 |
chr4.2 | exon | 47691349 | 47691417 | 47691349 | ID=MS.gene89956.t1.exon4;Parent=MS.gene89956.t1 |
chr4.2 | CDS | 47691349 | 47691417 | 47691349 | ID=cds.MS.gene89956.t1;Parent=MS.gene89956.t1 |
Gene Sequence |
Protein sequence |