AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene09363


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene09363.t1 MTR_4g056030 89.224 464 50 0 1 464 1 464 0.0 825
MS.gene09363.t1 MTR_4g056020 84.444 450 70 0 1 450 1 450 0.0 757
MS.gene09363.t1 MTR_4g055580 79.261 487 63 3 1 450 92 577 0.0 720
MS.gene09363.t1 MTR_4g055990 77.033 492 71 3 1 450 1 492 0.0 718
MS.gene09363.t1 MTR_4g055990 76.827 479 69 3 1 437 1 479 0.0 695
MS.gene09363.t1 MTR_4g056040 76.231 467 81 1 1 437 1 467 0.0 691
MS.gene09363.t1 MTR_4g056070 73.913 437 74 1 1 397 1 437 0.0 624
MS.gene09363.t1 MTR_1g038710 69.196 448 130 3 1 442 11 456 0.0 578
MS.gene09363.t1 MTR_1g090883 64.023 353 123 3 2 352 12 362 9.14e-142 411
MS.gene09363.t1 MTR_7g110920 55.587 358 102 5 99 437 1 320 2.60e-118 349
MS.gene09363.t1 MTR_4g056020 86.364 154 21 0 297 450 1 154 9.09e-90 270
MS.gene09363.t1 MTR_4g093690 56.250 272 110 6 1 268 10 276 8.80e-83 257
MS.gene09363.t1 MTR_1g090900 68.362 177 53 2 1 174 1 177 5.81e-70 221
MS.gene09363.t1 MTR_4g056010 84.848 99 15 0 69 167 2 100 4.78e-51 168
MS.gene09363.t1 MTR_5g084070 31.567 453 260 19 5 439 9 429 1.40e-34 134
MS.gene09363.t1 MTR_5g080710 30.415 434 243 16 5 416 29 425 1.45e-30 123
MS.gene09363.t1 MTR_1g090890 61.538 91 29 2 350 437 29 116 1.70e-29 112
MS.gene09363.t1 MTR_7g056433 27.703 444 241 18 4 434 7 383 6.26e-28 115
MS.gene09363.t1 MTR_8g445780 29.340 409 240 13 7 396 11 389 4.00e-27 112
MS.gene09363.t1 MTR_1g041245 29.710 414 210 15 9 411 11 354 4.54e-27 112
MS.gene09363.t1 MTR_3g108560 30.097 412 210 16 6 411 17 356 4.22e-25 107
MS.gene09363.t1 MTR_4g032730 29.956 454 235 21 9 411 15 436 2.40e-24 105
MS.gene09363.t1 MTR_8g468810 29.018 448 273 18 4 427 20 446 1.92e-23 102
MS.gene09363.t1 MTR_8g062270 30.023 433 249 20 9 411 16 424 1.93e-23 102
MS.gene09363.t1 MTR_3g107100 28.605 423 221 17 5 415 7 360 2.02e-23 102
MS.gene09363.t1 MTR_0492s0020 29.167 408 208 17 9 411 86 417 2.95e-23 102
MS.gene09363.t1 MTR_7g007080 27.352 457 229 21 7 438 2 380 3.70e-23 101
MS.gene09363.t1 MTR_0543s0010 29.167 408 208 17 9 411 86 417 3.85e-23 102
MS.gene09363.t1 MTR_8g467800 30.529 416 250 15 5 400 16 412 5.07e-23 101
MS.gene09363.t1 MTR_8g014260 27.056 462 275 15 6 434 13 445 7.09e-23 101
MS.gene09363.t1 MTR_2g083840 28.941 425 257 17 9 411 21 422 2.05e-21 97.1
MS.gene09363.t1 MTR_6g045333 27.251 422 219 17 9 411 61 413 3.38e-21 96.3
MS.gene09363.t1 MTR_8g468840 28.241 432 258 17 8 411 13 420 5.93e-21 95.5
MS.gene09363.t1 MTR_7g033990 26.492 419 214 16 9 411 11 351 7.05e-21 95.1
MS.gene09363.t1 MTR_8g058970 27.716 451 261 17 4 411 14 442 9.51e-21 95.1
MS.gene09363.t1 MTR_2g007400 27.742 465 230 22 9 440 12 403 9.97e-21 94.4
MS.gene09363.t1 MTR_3g107160 26.730 419 229 15 4 411 5 356 1.06e-20 94.0
MS.gene09363.t1 MTR_7g007340 27.477 444 215 16 4 437 8 354 2.03e-20 92.8
MS.gene09363.t1 MTR_3g108150 28.375 437 232 18 9 433 13 380 3.10e-20 92.8
MS.gene09363.t1 MTR_8g468810 31.563 339 195 15 4 320 20 343 6.64e-20 91.7
MS.gene09363.t1 MTR_7g033915 26.392 413 204 13 9 411 11 333 1.00e-19 90.9
MS.gene09363.t1 MTR_1g053025 25.901 444 249 17 9 434 2 383 1.22e-19 90.9
MS.gene09363.t1 MTR_8g468810 32.013 303 173 13 4 288 20 307 1.26e-19 90.1
MS.gene09363.t1 MTR_8g468810 31.803 305 175 13 4 290 20 309 1.33e-19 90.1
MS.gene09363.t1 MTR_8g468810 32.131 305 174 13 4 290 20 309 1.73e-19 90.1
MS.gene09363.t1 MTR_3g107120 28.074 431 223 15 1 411 1 364 3.35e-19 89.7
MS.gene09363.t1 MTR_8g014160 27.869 427 220 16 4 411 36 393 3.82e-19 89.7
MS.gene09363.t1 MTR_8g467800 32.131 305 179 10 5 294 16 307 1.02e-18 87.4
MS.gene09363.t1 MTR_3g036250 25.959 443 228 14 6 433 2 359 1.11e-18 87.8
MS.gene09363.t1 MTR_2g007500 27.750 400 191 17 9 388 14 335 5.27e-18 85.5
MS.gene09363.t1 MTR_3g048290 27.578 446 276 15 5 423 19 444 1.13e-17 85.9
MS.gene09363.t1 MTR_8g062310 33.803 213 116 9 9 213 25 220 1.30e-17 85.1
MS.gene09363.t1 MTR_7g056287 24.941 421 224 15 9 416 3 344 1.48e-17 84.3
MS.gene09363.t1 MTR_6g011460 26.777 422 228 15 9 421 46 395 1.75e-17 84.7
MS.gene09363.t1 MTR_7g056277 24.762 420 226 15 9 416 259 600 5.19e-17 84.0
MS.gene09363.t1 MTR_3g108560 37.037 189 105 7 6 193 17 192 5.80e-17 82.0
MS.gene09363.t1 MTR_7g098570 36.649 191 104 7 9 193 20 199 5.89e-17 83.6
MS.gene09363.t1 MTR_3g082890 26.905 420 234 15 6 411 94 454 7.03e-17 83.2
MS.gene09363.t1 MTR_2g091145 27.376 442 251 18 5 419 17 415 8.27e-17 82.8
MS.gene09363.t1 MTR_2g036470 26.667 420 221 20 9 411 14 363 9.23e-17 82.4
MS.gene09363.t1 MTR_2g007450 23.702 443 252 16 1 413 8 394 9.84e-17 82.4
MS.gene09363.t1 MTR_7g060470 25.408 429 246 16 9 423 3 371 1.22e-16 82.0
MS.gene09363.t1 MTR_4g039440 26.699 412 224 18 9 411 34 376 1.31e-16 82.0
MS.gene09363.t1 MTR_5g039950 27.952 415 237 16 9 411 23 387 3.18e-16 80.9
MS.gene09363.t1 MTR_4g050250 33.962 212 107 9 9 193 21 226 5.11e-16 80.5
MS.gene09363.t1 MTR_3g109982 27.133 457 252 16 9 411 13 442 7.96e-16 80.5
MS.gene09363.t1 MTR_7g056447 36.323 223 116 11 1 209 1 211 8.22e-16 78.2
MS.gene09363.t1 MTR_5g007410 24.460 417 230 17 11 411 28 375 1.14e-15 79.3
MS.gene09363.t1 MTR_3g071850 24.882 422 245 12 9 419 24 384 1.74e-15 79.7
MS.gene09363.t1 MTR_7g032380 32.804 189 115 6 9 193 11 191 3.18e-15 77.4
MS.gene09363.t1 MTR_7g098510 34.197 193 106 6 9 193 18 197 3.54e-15 77.4
MS.gene09363.t1 MTR_8g062080 33.171 205 115 7 1 193 15 209 3.74e-15 77.8
MS.gene09363.t1 MTR_8g062010 34.653 202 110 8 1 191 1 191 3.85e-15 77.8
MS.gene09363.t1 MTR_5g045510 35.897 195 100 12 9 193 12 191 4.08e-15 77.0
MS.gene09363.t1 MTR_2g008320 26.067 445 242 17 9 436 52 426 4.46e-15 77.4
MS.gene09363.t1 MTR_1g085120 25.180 417 228 18 9 411 92 438 5.39e-15 77.4
MS.gene09363.t1 MTR_7g115270 34.010 197 110 8 9 193 12 200 5.69e-15 77.0
MS.gene09363.t1 MTR_5g040850 25.708 459 269 15 4 435 2 415 6.40e-15 77.0
MS.gene09363.t1 MTR_7g034115 34.343 198 110 8 9 198 11 196 6.40e-15 76.6
MS.gene09363.t1 MTR_1g085120 25.180 417 228 18 9 411 167 513 7.36e-15 77.4
MS.gene09363.t1 MTR_3g023630 25.180 417 219 17 9 411 8 345 8.35e-15 76.3
MS.gene09363.t1 MTR_1g108820 26.492 419 218 18 9 411 8 352 1.34e-14 75.5
MS.gene09363.t1 MTR_1g013560 23.928 443 259 12 1 411 11 407 1.71e-14 75.9
MS.gene09363.t1 MTR_7g026500 26.174 447 236 21 8 432 13 387 1.72e-14 75.5
MS.gene09363.t1 MTR_7g055943 25.792 442 240 19 3 427 34 404 2.02e-14 75.5
MS.gene09363.t1 MTR_1g013560 31.527 203 118 5 5 195 15 208 3.71e-14 73.9
MS.gene09363.t1 MTR_4g080773 26.949 449 273 19 9 423 19 446 5.55e-14 74.3
MS.gene09363.t1 MTR_0009s0080 25.362 414 230 16 11 411 20 367 6.47e-14 73.9
MS.gene09363.t1 MTR_7g021630 28.150 373 196 19 6 342 14 350 6.58e-14 73.2
MS.gene09363.t1 MTR_8g085430 32.178 202 106 6 9 193 11 198 6.71e-14 73.2
MS.gene09363.t1 MTR_7g021630 28.150 373 196 19 6 342 14 350 7.36e-14 73.2
MS.gene09363.t1 MTR_4g080773 27.231 437 263 19 9 411 19 434 8.11e-14 73.9
MS.gene09363.t1 MTR_8g070950 34.010 197 110 8 6 193 12 197 8.14e-14 73.6
MS.gene09363.t1 MTR_7g034110 28.431 204 106 5 9 193 11 193 1.13e-13 72.4
MS.gene09363.t1 MTR_2g047858 26.136 440 244 15 5 411 111 502 1.19e-13 73.6
MS.gene09363.t1 MTR_3g087260 27.727 440 254 17 9 411 12 424 1.98e-13 72.4
MS.gene09363.t1 MTR_2g094750 25.917 409 221 18 11 361 92 476 2.38e-13 72.4
MS.gene09363.t1 MTR_8g468760 30.717 293 163 13 1 270 1 276 3.83e-13 71.2
MS.gene09363.t1 MTR_1g115245 31.953 169 105 3 4 164 21 187 5.68e-13 70.1
MS.gene09363.t1 MTR_1g021825 23.312 459 284 14 4 438 83 497 6.82e-13 70.9
MS.gene09363.t1 MTR_1g021825 23.312 459 284 14 4 438 12 426 7.28e-13 70.5
MS.gene09363.t1 MTR_2g005990 32.547 212 107 10 9 197 6 204 8.70e-13 70.1
MS.gene09363.t1 MTR_5g092960 27.609 460 259 22 5 422 15 442 9.19e-13 70.5
MS.gene09363.t1 MTR_1g013840 27.231 437 239 19 7 411 54 443 9.31e-13 70.5
MS.gene09363.t1 MTR_1g108820 34.518 197 97 10 9 193 8 184 1.35e-12 69.3
MS.gene09363.t1 MTR_1g066830 31.633 196 108 9 9 193 8 188 1.73e-12 69.3
MS.gene09363.t1 MTR_5g045170 29.245 212 89 7 11 193 16 195 1.81e-12 69.3
MS.gene09363.t1 MTR_3g082890 25.110 454 236 15 6 411 14 411 2.07e-12 69.3
MS.gene09363.t1 MTR_2g047848 24.197 467 273 17 4 435 2 422 2.43e-12 68.9
MS.gene09363.t1 MTR_6g022360 32.323 198 104 7 3 193 37 211 2.44e-12 68.9
MS.gene09363.t1 MTR_7g033945 35.294 170 92 6 9 166 11 174 2.57e-12 65.9
MS.gene09363.t1 MTR_6g029350 28.182 220 129 8 233 445 6 203 2.60e-12 67.0
MS.gene09363.t1 MTR_1g085120 32.124 193 112 9 9 193 179 360 3.20e-12 68.9
MS.gene09363.t1 MTR_5g061680 32.836 201 109 8 9 197 11 197 3.64e-12 67.8
MS.gene09363.t1 MTR_4g050930 28.739 341 193 14 7 322 27 342 6.51e-12 67.4
MS.gene09363.t1 MTR_8g077460 31.925 213 118 6 4 198 5 208 7.27e-12 67.0
MS.gene09363.t1 MTR_4g050930 28.739 341 193 14 7 322 27 342 1.10e-11 67.0
MS.gene09363.t1 MTR_4g047950 28.846 312 186 14 5 298 9 302 1.20e-11 66.6
MS.gene09363.t1 MTR_8g467790 34.634 205 99 10 9 193 148 337 1.30e-11 67.0
MS.gene09363.t1 MTR_1g021820 36.691 139 79 4 4 134 23 160 1.80e-11 66.2
MS.gene09363.t1 MTR_5g021550 34.667 150 79 5 5 137 15 162 1.91e-11 62.8
MS.gene09363.t1 MTR_3g040700 29.843 191 120 6 9 193 43 225 2.22e-11 65.9
MS.gene09363.t1 MTR_8g017280 31.228 285 170 12 7 278 34 305 2.78e-11 65.5
MS.gene09363.t1 MTR_5g008950 32.075 106 67 2 311 413 233 336 4.06e-11 65.1
MS.gene09363.t1 MTR_7g110910 81.579 38 7 0 1 38 158 195 4.70e-11 62.4
MS.gene09363.t1 MTR_3g110010 32.258 186 116 5 9 193 13 189 7.67e-11 65.1
MS.gene09363.t1 MTR_7g075820 31.050 219 117 9 9 201 6 216 9.35e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene09363.t1 AT4G00315 29.748 437 253 18 9 416 2 413 7.47e-32 127
MS.gene09363.t1 AT4G10400 29.167 432 268 13 9 433 2 402 4.87e-29 118
MS.gene09363.t1 AT4G10400 29.167 432 268 13 9 433 2 402 4.87e-29 118
MS.gene09363.t1 AT4G10400 29.167 432 268 13 9 433 2 402 4.87e-29 118
MS.gene09363.t1 AT1G55660 28.767 438 256 20 9 416 53 464 7.47e-29 119
MS.gene09363.t1 AT4G14103 30.871 379 211 14 8 356 7 364 1.80e-28 116
MS.gene09363.t1 AT4G14103 30.871 379 211 14 8 356 7 364 1.80e-28 116
MS.gene09363.t1 AT4G14103 31.081 370 204 14 8 347 7 355 7.53e-28 115
MS.gene09363.t1 AT4G14096 30.376 372 203 14 8 350 7 351 4.40e-26 110
MS.gene09363.t1 AT4G14096 30.376 372 203 14 8 350 7 351 4.40e-26 110
MS.gene09363.t1 AT3G50710 28.873 426 255 15 9 416 2 397 5.91e-26 110
MS.gene09363.t1 AT1G51370 28.738 428 260 15 7 420 17 413 8.99e-26 109
MS.gene09363.t1 AT3G59190 30.667 375 208 14 9 347 12 370 1.82e-25 107
MS.gene09363.t1 AT4G26340 27.361 413 272 13 9 416 2 391 3.50e-25 107
MS.gene09363.t1 AT3G59190 30.585 376 209 14 9 348 12 371 3.68e-25 108
MS.gene09363.t1 AT2G26860 29.952 414 260 14 9 411 2 396 3.98e-25 107
MS.gene09363.t1 AT2G26860 29.952 414 260 14 9 411 2 396 3.98e-25 107
MS.gene09363.t1 AT4G22280 31.496 381 210 13 9 368 2 352 9.93e-25 106
MS.gene09363.t1 AT5G60610 29.257 417 249 16 9 411 2 386 9.97e-25 105
MS.gene09363.t1 AT5G60610 29.257 417 249 16 9 411 2 386 9.97e-25 105
MS.gene09363.t1 AT5G41830 25.847 472 274 15 3 415 7 461 1.21e-23 103
MS.gene09363.t1 AT3G03030 28.191 376 221 10 9 348 2 364 1.74e-23 103
MS.gene09363.t1 AT4G22280 31.944 360 194 13 9 347 2 331 2.20e-23 100
MS.gene09363.t1 AT4G00320 28.141 398 230 13 3 361 7 387 2.37e-23 103
MS.gene09363.t1 AT5G38396 30.159 378 206 13 9 348 2 359 2.64e-23 102
MS.gene09363.t1 AT5G56440 27.907 430 249 15 9 411 2 397 2.67e-23 102
MS.gene09363.t1 AT5G38590 27.315 432 273 13 9 428 2 404 8.43e-23 100
MS.gene09363.t1 AT5G56420 28.372 430 260 19 8 423 5 400 1.06e-22 100
MS.gene09363.t1 AT5G56420 28.372 430 260 19 8 423 5 400 1.06e-22 100
MS.gene09363.t1 AT5G56420 28.372 430 260 19 8 423 5 400 1.06e-22 100
MS.gene09363.t1 AT5G56380 27.512 418 250 14 9 399 2 393 1.73e-22 100
MS.gene09363.t1 AT5G56380 27.512 418 250 14 9 399 2 393 1.73e-22 100
MS.gene09363.t1 AT5G56370 30.162 431 259 19 9 430 2 399 2.06e-22 99.8
MS.gene09363.t1 AT5G56370 30.162 431 259 19 9 430 2 399 2.06e-22 99.8
MS.gene09363.t1 AT3G59230 27.673 477 261 17 9 431 12 458 2.47e-22 100
MS.gene09363.t1 AT1G78760 29.797 443 244 22 7 419 14 419 3.53e-22 99.4
MS.gene09363.t1 AT1G55660 30.547 311 166 14 9 290 53 342 6.90e-22 97.4
MS.gene09363.t1 AT3G59250 26.562 448 264 16 9 433 7 412 9.09e-22 97.8
MS.gene09363.t1 AT5G41840 28.682 387 215 12 9 348 14 386 1.18e-21 98.2
MS.gene09363.t1 AT1G51370 29.167 384 230 13 7 378 17 370 1.33e-21 97.1
MS.gene09363.t1 AT3G58860 28.412 359 220 11 6 346 4 343 5.11e-21 95.9
MS.gene09363.t1 AT1G78750 27.941 476 268 19 2 442 11 446 6.42e-21 95.5
MS.gene09363.t1 AT1G78750 27.941 476 268 19 2 442 11 446 6.42e-21 95.5
MS.gene09363.t1 AT3G59160 25.481 416 223 15 9 360 13 405 6.59e-21 95.5
MS.gene09363.t1 AT5G56400 28.369 423 248 17 9 411 33 420 7.04e-21 95.5
MS.gene09363.t1 AT2G04230 26.539 471 267 18 8 441 12 440 9.91e-21 94.7
MS.gene09363.t1 AT3G59170 29.639 415 226 13 9 368 7 410 9.93e-21 95.1
MS.gene09363.t1 AT5G22700 29.091 440 231 21 9 408 6 404 1.37e-20 94.4
MS.gene09363.t1 AT5G22700 29.091 440 231 21 9 408 6 404 1.37e-20 94.4
MS.gene09363.t1 AT5G22700 29.091 440 231 21 9 408 6 404 1.37e-20 94.4
MS.gene09363.t1 AT5G22700 29.091 440 231 21 9 408 6 404 1.37e-20 94.4
MS.gene09363.t1 AT5G22700 29.091 440 231 21 9 408 43 441 1.67e-20 94.4
MS.gene09363.t1 AT2G26030 28.000 425 260 17 9 409 4 406 2.31e-20 93.6
MS.gene09363.t1 AT2G26030 28.000 425 260 17 9 409 4 406 2.31e-20 93.6
MS.gene09363.t1 AT3G59200 27.178 482 264 20 8 433 6 456 2.69e-20 94.0
MS.gene09363.t1 AT4G13965 28.507 442 240 20 9 422 10 403 3.27e-20 93.2
MS.gene09363.t1 AT1G69630 28.539 445 263 18 2 419 11 427 4.13e-20 92.8
MS.gene09363.t1 AT2G26030 27.869 427 263 17 9 409 4 411 5.41e-20 92.4
MS.gene09363.t1 AT3G52680 27.934 426 249 14 9 413 21 409 6.03e-20 92.4
MS.gene09363.t1 AT3G03040 27.297 381 217 10 9 350 2 361 8.05e-20 92.4
MS.gene09363.t1 AT4G13960 27.926 376 210 11 9 348 2 352 8.15e-20 92.0
MS.gene09363.t1 AT4G13960 27.926 376 210 11 9 348 2 352 8.15e-20 92.0
MS.gene09363.t1 AT1G66300 28.294 463 262 21 4 433 24 449 8.39e-20 92.0
MS.gene09363.t1 AT1G58310 27.692 390 215 10 8 348 7 378 9.40e-20 92.4
MS.gene09363.t1 AT3G59210 29.412 374 218 11 5 348 3 360 1.14e-19 92.0
MS.gene09363.t1 AT3G59210 29.412 374 218 11 5 348 3 360 1.14e-19 92.0
MS.gene09363.t1 AT3G59210 29.412 374 218 11 5 348 3 360 1.14e-19 92.0
MS.gene09363.t1 AT3G59210 29.412 374 218 11 5 348 3 360 1.14e-19 92.0
MS.gene09363.t1 AT3G59210 29.412 374 218 11 5 348 3 360 1.14e-19 92.0
MS.gene09363.t1 AT1G51370 36.410 195 108 6 7 199 17 197 1.34e-19 90.1
MS.gene09363.t1 AT5G44490 27.826 460 252 21 4 421 12 433 1.67e-19 91.3
MS.gene09363.t1 AT5G38386 25.562 356 192 12 9 348 2 300 2.49e-19 90.1
MS.gene09363.t1 AT5G38386 25.562 356 192 12 9 348 2 300 2.49e-19 90.1
MS.gene09363.t1 AT5G53840 28.103 427 249 16 7 411 16 406 2.53e-19 90.5
MS.gene09363.t1 AT5G44490 27.826 460 252 21 4 421 12 433 2.67e-19 90.9
MS.gene09363.t1 AT4G26350 24.598 435 265 15 9 416 2 400 3.31e-19 90.1
MS.gene09363.t1 AT1G66310 29.295 454 265 18 4 433 14 435 3.61e-19 90.1
MS.gene09363.t1 AT3G03030 29.012 324 185 9 9 296 2 316 3.87e-19 88.6
MS.gene09363.t1 AT3G59200 28.272 382 209 14 8 347 6 364 4.20e-19 89.0
MS.gene09363.t1 AT3G58960 27.865 384 211 14 9 353 2 358 4.87e-19 89.7
MS.gene09363.t1 AT5G56410 27.394 449 269 20 9 425 2 425 5.93e-19 89.7
MS.gene09363.t1 AT1G06630 29.050 358 220 12 8 347 11 352 7.78e-19 88.2
MS.gene09363.t1 AT1G06630 29.050 358 220 12 8 347 11 352 7.78e-19 88.2
MS.gene09363.t1 AT5G38570 25.688 436 247 15 9 434 2 370 1.33e-18 87.8
MS.gene09363.t1 AT1G06630 29.050 358 220 12 8 347 11 352 1.36e-18 87.8
MS.gene09363.t1 AT1G06630 29.050 358 220 12 8 347 11 352 1.36e-18 87.8
MS.gene09363.t1 AT1G06630 29.050 358 220 12 8 347 11 352 1.36e-18 87.8
MS.gene09363.t1 AT1G06630 29.050 358 220 12 8 347 11 352 1.36e-18 87.8
MS.gene09363.t1 AT1G06630 29.050 358 220 12 8 347 20 361 1.79e-18 87.8
MS.gene09363.t1 AT3G58880 28.841 371 217 12 9 350 3 355 2.12e-18 87.8
MS.gene09363.t1 AT1G06630 29.050 358 220 12 8 347 11 352 2.32e-18 87.8
MS.gene09363.t1 AT5G22670 28.103 427 252 18 8 408 10 407 2.41e-18 87.4
MS.gene09363.t1 AT5G44950 27.511 458 269 20 8 432 3 430 2.56e-18 87.4
MS.gene09363.t1 AT3G58900 29.058 382 206 13 9 348 2 360 2.89e-18 87.4
MS.gene09363.t1 AT1G16930 29.186 442 239 20 9 423 15 409 3.88e-18 87.0
MS.gene09363.t1 AT1G16930 29.186 442 239 20 9 423 15 409 3.88e-18 87.0
MS.gene09363.t1 AT1G16930 29.186 442 239 20 9 423 15 409 3.88e-18 87.0
MS.gene09363.t1 AT1G13780 25.917 436 263 17 9 409 10 420 4.52e-18 86.7
MS.gene09363.t1 AT1G52650 25.792 442 262 16 9 411 2 416 4.55e-18 87.0
MS.gene09363.t1 AT1G55030 27.206 408 259 14 9 408 9 386 5.45e-18 86.3
MS.gene09363.t1 AT1G55030 27.206 408 259 14 9 408 19 396 5.84e-18 86.3
MS.gene09363.t1 AT1G66290 27.716 451 248 19 4 420 24 430 7.08e-18 86.3
MS.gene09363.t1 AT4G00160 27.685 419 261 13 9 413 16 406 7.48e-18 86.3
MS.gene09363.t1 AT1G05080 28.741 421 259 15 8 411 12 408 1.03e-17 85.5
MS.gene09363.t1 AT3G62440 27.525 396 222 17 9 361 2 375 1.41e-17 85.5
MS.gene09363.t1 AT5G25860 29.268 369 219 15 9 348 12 367 1.48e-17 85.1
MS.gene09363.t1 AT5G18780 27.828 442 268 17 9 427 11 424 1.73e-17 85.1
MS.gene09363.t1 AT5G18780 27.828 442 268 17 9 427 11 424 1.73e-17 85.1
MS.gene09363.t1 AT3G58920 27.577 388 225 16 9 355 2 374 1.94e-17 85.1
MS.gene09363.t1 AT3G58940 26.667 360 222 10 9 348 2 339 2.45e-17 85.1
MS.gene09363.t1 AT3G58940 26.667 360 222 10 9 348 2 339 2.45e-17 85.1
MS.gene09363.t1 AT5G56820 25.974 462 286 16 9 459 15 431 4.09e-17 84.0
MS.gene09363.t1 AT5G22610 27.549 461 265 17 8 427 17 449 4.13e-17 84.0
MS.gene09363.t1 AT3G59240 28.212 358 228 10 9 348 8 354 4.31e-17 84.0
MS.gene09363.t1 AT5G53635 27.828 442 238 22 11 411 2 403 5.50e-17 83.2
MS.gene09363.t1 AT3G58930 26.804 388 217 11 9 348 2 370 8.52e-17 83.2
MS.gene09363.t1 AT3G58930 26.804 388 217 11 9 348 2 370 8.52e-17 83.2
MS.gene09363.t1 AT3G58930 26.804 388 217 11 9 348 2 370 8.52e-17 83.2
MS.gene09363.t1 AT2G42720 29.101 378 199 18 9 348 2 348 1.07e-16 82.4
MS.gene09363.t1 AT3G42770 27.511 458 255 20 14 435 4 420 1.09e-16 82.8
MS.gene09363.t1 AT3G56780 25.506 494 276 17 11 439 9 475 1.29e-16 82.4
MS.gene09363.t1 AT4G09920 29.195 298 182 12 9 295 2 281 1.62e-16 80.9
MS.gene09363.t1 AT4G09920 29.195 298 182 12 9 295 2 281 1.62e-16 80.9
MS.gene09363.t1 AT5G22610 27.376 442 260 16 8 427 17 419 2.95e-16 81.3
MS.gene09363.t1 AT5G56370 31.503 346 197 17 9 346 2 315 3.46e-16 79.7
MS.gene09363.t1 AT4G09920 29.293 297 181 12 9 294 2 280 3.80e-16 79.3
MS.gene09363.t1 AT4G09920 29.293 297 181 12 9 294 2 280 3.80e-16 79.3
MS.gene09363.t1 AT4G09920 29.293 297 181 12 9 294 2 280 3.80e-16 79.3
MS.gene09363.t1 AT5G22660 27.021 433 257 18 8 411 12 414 5.17e-16 80.5
MS.gene09363.t1 AT5G22700 28.169 426 212 21 9 408 43 400 6.46e-16 80.1
MS.gene09363.t1 AT5G38590 30.769 260 166 8 9 264 2 251 8.57e-16 78.2
MS.gene09363.t1 AT5G18770 25.708 459 298 16 9 442 24 464 1.13e-15 79.7
MS.gene09363.t1 AT5G25850 35.602 191 101 8 9 193 20 194 1.14e-15 79.7
MS.gene09363.t1 AT5G38390 27.441 379 203 16 9 348 2 347 1.15e-15 79.3
MS.gene09363.t1 AT3G59000 24.324 444 278 12 9 413 2 426 1.56e-15 79.3
MS.gene09363.t1 AT3G44060 30.027 373 211 21 14 360 4 352 1.66e-15 79.0
MS.gene09363.t1 AT3G26930 27.536 414 258 17 8 409 20 403 2.03e-15 78.6
MS.gene09363.t1 AT5G41630 27.336 428 228 17 9 377 12 415 2.27e-15 78.6
MS.gene09363.t1 AT5G56690 28.979 421 254 17 11 411 4 399 2.47e-15 78.2
MS.gene09363.t1 AT3G52680 28.771 358 199 12 9 346 21 342 3.51e-15 77.4
MS.gene09363.t1 AT3G49030 26.852 432 269 15 7 423 19 418 3.84e-15 77.8
MS.gene09363.t1 AT1G13780 27.812 320 182 13 9 294 10 314 4.29e-15 76.6
MS.gene09363.t1 AT5G22730 26.807 429 264 16 8 409 27 432 4.49e-15 77.8
MS.gene09363.t1 AT5G22730 26.807 429 264 16 8 409 27 432 4.49e-15 77.8
MS.gene09363.t1 AT5G38392 35.407 209 107 8 9 199 2 200 5.83e-15 74.3
MS.gene09363.t1 AT5G56560 26.906 446 284 18 6 438 2 418 7.39e-15 76.6
MS.gene09363.t1 AT4G15060 26.402 428 236 18 6 395 23 409 8.55e-15 76.6
MS.gene09363.t1 AT3G58900 29.052 327 181 11 9 298 2 314 1.08e-14 75.1
MS.gene09363.t1 AT4G10420 26.590 346 212 12 99 433 1 315 2.01e-14 74.7
MS.gene09363.t1 AT5G56810 28.066 424 248 19 9 411 15 402 2.18e-14 75.5
MS.gene09363.t1 AT3G58900 28.923 325 180 11 9 296 2 312 2.76e-14 74.3
MS.gene09363.t1 AT3G58900 28.923 325 180 11 9 296 2 312 2.76e-14 74.3
MS.gene09363.t1 AT1G66320 26.728 434 261 19 4 411 24 426 3.21e-14 75.1
MS.gene09363.t1 AT3G60040 26.431 367 227 10 9 347 13 364 4.06e-14 75.1
MS.gene09363.t1 AT4G15060 28.358 335 195 13 7 314 170 486 5.06e-14 74.7
MS.gene09363.t1 AT3G60040 26.431 367 227 10 9 347 232 583 5.75e-14 75.1
MS.gene09363.t1 AT3G60040 26.431 367 227 10 9 347 233 584 6.12e-14 74.7
MS.gene09363.t1 AT3G59000 30.698 215 122 8 9 197 2 215 6.44e-14 73.2
MS.gene09363.t1 AT3G60040 26.431 367 227 10 9 347 232 583 6.80e-14 74.3
MS.gene09363.t1 AT3G60040 26.431 367 227 10 9 347 230 581 6.91e-14 74.3
MS.gene09363.t1 AT3G51530 26.852 432 258 17 9 419 30 424 1.08e-13 73.2
MS.gene09363.t1 AT1G48400 25.000 404 227 15 8 355 9 392 1.39e-13 73.2
MS.gene09363.t1 AT5G18780 28.333 360 213 14 9 346 11 347 1.45e-13 72.4
MS.gene09363.t1 AT5G18780 28.333 360 213 14 9 346 11 347 1.45e-13 72.4
MS.gene09363.t1 AT5G35995 27.151 372 209 18 8 348 4 344 1.62e-13 72.8
MS.gene09363.t1 AT5G35995 27.151 372 209 18 8 348 4 344 1.62e-13 72.8
MS.gene09363.t1 AT3G58980 25.926 378 233 13 9 356 2 362 1.86e-13 73.2
MS.gene09363.t1 AT3G26922 31.667 240 153 8 8 244 13 244 2.72e-13 70.9
MS.gene09363.t1 AT3G26922 31.667 240 153 8 8 244 13 244 2.72e-13 70.9
MS.gene09363.t1 AT3G59180 27.632 304 179 11 69 348 41 327 3.06e-13 72.0
MS.gene09363.t1 AT5G53640 31.579 190 114 7 7 193 20 196 4.93e-13 68.9
MS.gene09363.t1 AT5G56390 25.598 418 273 14 9 413 2 394 7.56e-13 70.5
MS.gene09363.t1 AT3G26930 26.425 386 242 17 36 409 3 358 7.81e-13 70.5
MS.gene09363.t1 AT5G18770 26.629 353 226 12 9 342 24 362 1.09e-12 69.7
MS.gene09363.t1 AT4G13985 27.149 442 260 17 4 411 14 427 1.70e-12 69.7
MS.gene09363.t1 AT3G14710 26.362 459 274 18 3 435 20 440 2.64e-12 68.9
MS.gene09363.t1 AT1G06630 28.197 305 186 11 8 294 11 300 3.61e-12 67.4
MS.gene09363.t1 AT5G22730 32.500 200 114 8 8 199 27 213 5.84e-12 67.8
MS.gene09363.t1 AT3G49150 23.881 469 305 14 9 442 16 467 7.00e-12 67.8
MS.gene09363.t1 AT1G19070 62.222 45 17 0 9 53 2 46 1.19e-11 61.2
MS.gene09363.t1 AT5G22720 26.846 447 252 18 4 409 18 430 1.23e-11 67.0
MS.gene09363.t1 AT3G54910 25.613 367 237 13 79 438 36 373 1.92e-11 65.9
MS.gene09363.t1 AT3G54910 25.613 367 237 13 79 438 36 373 1.92e-11 65.9
MS.gene09363.t1 AT3G54910 25.613 367 237 13 79 438 36 373 1.92e-11 65.9
MS.gene09363.t1 AT5G22660 31.217 189 114 7 9 193 13 189 2.44e-11 65.1
MS.gene09363.t1 AT3G58930 24.734 376 206 10 9 348 2 336 2.73e-11 65.9
MS.gene09363.t1 AT3G58930 24.734 376 206 10 9 348 2 336 2.73e-11 65.9
MS.gene09363.t1 AT3G56780 24.122 427 250 15 11 385 9 413 4.31e-11 65.1

Find 84 sgRNAs with CRISPR-Local

Find 126 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGACTTAAATTTATTTAT+TGG 0.117769 4.1:+42159390 None:intergenic
ATTTACAAATTTGATTTCTT+TGG 0.216730 4.1:+42161319 None:intergenic
TCACAATTTATTATCTTTAT+CGG 0.257922 4.1:-42160478 MS.gene09363:CDS
AGAAATCCTCCGTACTAGTA+TGG 0.259970 4.1:-42159841 MS.gene09363:CDS
ATGACTTAAATTTATTTATT+GGG 0.271672 4.1:+42159391 None:intergenic
CTCATTACATTTGAATTTGT+TGG 0.272022 4.1:-42159998 MS.gene09363:CDS
ACATGTTCTATAGGACTCTT+TGG 0.280320 4.1:+42161427 None:intergenic
CACTCGTGGTCTTAAAATTC+CGG 0.281718 4.1:-42161112 MS.gene09363:CDS
ATTGCAAGATCCTTAAGTTT+TGG 0.305825 4.1:+42160399 None:intergenic
AGTTTCCAACCTCCTTTCTT+CGG 0.314970 4.1:+42160068 None:intergenic
TCTATCTGGTTGTCCACATT+TGG 0.320155 4.1:-42160961 MS.gene09363:CDS
TAATTCAATTGAAGATCATT+TGG 0.321337 4.1:-42159458 MS.gene09363:CDS
ATCTTTGTTATGCAGTTTCT+CGG 0.334332 4.1:-42160540 MS.gene09363:intron
GTTTCCAACCTCCTTTCTTC+GGG 0.346723 4.1:+42160069 None:intergenic
GATCTCAATAAGTTTCTATC+TGG 0.393120 4.1:-42160975 MS.gene09363:CDS
GAGATCTTCAATACCCTTGA+AGG 0.396272 4.1:+42159432 None:intergenic
ACTTTCTAATGTCAAATCAT+TGG 0.400805 4.1:-42160667 MS.gene09363:CDS
ACTCGTGGTCTTAAAATTCC+GGG 0.408358 4.1:-42161111 MS.gene09363:CDS
TGACATTAGAAAGTCCCTTC+AGG 0.408452 4.1:+42160676 None:intergenic
AATAGCAGCTTCATCAAGAT+TGG 0.411607 4.1:+42160740 None:intergenic
ACTTAAGGATCTTGCAATTG+AGG 0.413085 4.1:-42160394 MS.gene09363:intron
AAAGTGAAGGTTGGGAATCT+TGG 0.417455 4.1:+42161373 None:intergenic
ACAGATCCAAGTCAAGTTCC+TGG 0.422138 4.1:+42161183 None:intergenic
ATCTGGTTGTCCACATTTGG+AGG 0.433975 4.1:-42160958 MS.gene09363:CDS
GGTAATTGAAAGTGAAGGTT+GGG 0.443422 4.1:+42161365 None:intergenic
ACACAATGCACCAAAACTTA+AGG 0.445433 4.1:-42160409 MS.gene09363:CDS
CTAAGTCTTGATAGTGAGAA+TGG 0.446214 4.1:-42161260 MS.gene09363:CDS
TATAGGACTCTTTGGTTGGT+AGG 0.450093 4.1:+42161435 None:intergenic
CAAGGTCCAGGAACTTGACT+TGG 0.457085 4.1:-42161189 MS.gene09363:CDS
AAGTGAAAAGAGGTGTTGAT+AGG 0.462824 4.1:+42160906 None:intergenic
GGATAGAACACATGTTCTAT+AGG 0.464515 4.1:+42161418 None:intergenic
TACAAATTGTTAAAATCCGC+AGG 0.464746 4.1:+42160705 None:intergenic
GAGAAAGATCTTCAAGTGAC+GGG 0.472802 4.1:+42160811 None:intergenic
TGAAATCAATTCCCGAAGAA+AGG 0.482837 4.1:-42160080 MS.gene09363:CDS
AGATCATTTGGATGCCTTCA+AGG 0.486402 4.1:-42159446 MS.gene09363:CDS
GGCATTAGATCTCAAGGTCC+AGG 0.496808 4.1:-42161201 MS.gene09363:CDS
GGAGGTTGGAAACTCGAGTT+GGG 0.509671 4.1:-42160059 MS.gene09363:CDS
AACACAGGGTCTGAATTCTC+TGG 0.516956 4.1:+42161344 None:intergenic
GTTCTATAGGACTCTTTGGT+TGG 0.518746 4.1:+42161431 None:intergenic
TGTTATGCAGTTTCTCGGCA+TGG 0.521848 4.1:-42160535 MS.gene09363:intron
TAACACTTAATAACAGAAGT+AGG 0.522805 4.1:+42160852 None:intergenic
TGTACACATGTGGGTTTCAA+AGG 0.528762 4.1:-42161222 MS.gene09363:CDS
TTGATTTCTTTGGATAACAC+AGG 0.538591 4.1:+42161329 None:intergenic
CATGTGTTCTATCCACAAGA+TGG 0.542093 4.1:-42161409 MS.gene09363:CDS
TTCAAAGGCATTAGATCTCA+AGG 0.542872 4.1:-42161207 MS.gene09363:CDS
GATCATTTGGATGCCTTCAA+GGG 0.544625 4.1:-42159445 MS.gene09363:CDS
GGTGGAGCCATTGATATCTC+CGG 0.546718 4.1:-42160038 MS.gene09363:CDS
AAATTCAAATGTAATGAGAC+TGG 0.547394 4.1:+42160003 None:intergenic
GAAATCCTCCGTACTAGTAT+GGG 0.549114 4.1:-42159840 MS.gene09363:intron
GACGGGGCATTAATTTGTAG+TGG 0.550813 4.1:+42160828 None:intergenic
TGGTAATTGAAAGTGAAGGT+TGG 0.551378 4.1:+42161364 None:intergenic
CAATTTGTATACAGTCCTGA+AGG 0.553354 4.1:-42160691 MS.gene09363:CDS
AGGAGGTTGGAAACTCGAGT+TGG 0.571978 4.1:-42160060 MS.gene09363:CDS
GCAGATCGACTCCCATCTTG+TGG 0.572297 4.1:+42161397 None:intergenic
AACTCGTACCCATACTAGTA+CGG 0.577624 4.1:+42159832 None:intergenic
ATGTGTTCTATCCACAAGAT+GGG 0.579779 4.1:-42161408 MS.gene09363:CDS
AGACTGGTTGTAAGACATGC+CGG 0.580136 4.1:+42160019 None:intergenic
TTCCATGTGTGAGTCACTCG+TGG 0.584920 4.1:-42161126 MS.gene09363:CDS
AGAGAAAGATCTTCAAGTGA+CGG 0.585255 4.1:+42160810 None:intergenic
AAATATCTGAGAATTGCAGT+TGG 0.586019 4.1:-42160452 MS.gene09363:CDS
TCACTCAAGTAAGCTAGAGA+AGG 0.587930 4.1:-42159927 MS.gene09363:CDS
AGACATGCCGGAGATATCAA+TGG 0.591239 4.1:+42160031 None:intergenic
AATTCCCGAAGAAAGGAGGT+TGG 0.591474 4.1:-42160073 MS.gene09363:CDS
GTGTTGGTTGAATTCTGCCC+CGG 0.596613 4.1:+42161093 None:intergenic
TCTTCATCTCCACGAAAATG+TGG 0.608198 4.1:-42161030 MS.gene09363:CDS
AATCAATTCCCGAAGAAAGG+AGG 0.619715 4.1:-42160077 MS.gene09363:CDS
GGTTGGAAACTCGAGTTGGG+TGG 0.621687 4.1:-42160056 MS.gene09363:CDS
TGATTTCTTTGGATAACACA+GGG 0.625009 4.1:+42161330 None:intergenic
ACCACATGATGTACACATGT+GGG 0.639358 4.1:-42161231 MS.gene09363:CDS
AATTTGTATACAGTCCTGAA+GGG 0.640048 4.1:-42160690 MS.gene09363:CDS
GACCACGAGTGACTCACACA+TGG 0.648921 4.1:+42161124 None:intergenic
TGAAAAGAAGACTTGAGTGT+TGG 0.649400 4.1:+42161077 None:intergenic
AAGTAGGCATATATAAACAA+AGG 0.650404 4.1:+42160868 None:intergenic
ACATGTGTACATCATGTGGT+AGG 0.651644 4.1:+42161234 None:intergenic
TCGTACCCATACTAGTACGG+AGG 0.652397 4.1:+42159835 None:intergenic
TACCACATGATGTACACATG+TGG 0.655277 4.1:-42161232 MS.gene09363:CDS
CTCGTGGTCTTAAAATTCCG+GGG 0.656606 4.1:-42161110 MS.gene09363:CDS
TCTCTGGTAATTGAAAGTGA+AGG 0.665693 4.1:+42161360 None:intergenic
GGTGTTGATAGGTAATGCAA+AGG 0.665875 4.1:+42160917 None:intergenic
AGATGAAGAATCTTTAGTGA+CGG 0.666233 4.1:+42161044 None:intergenic
AGAAAGATCTTCAAGTGACG+GGG 0.690406 4.1:+42160812 None:intergenic
TCACACATGGAAAGCCTAAG+CGG 0.698789 4.1:+42161137 None:intergenic
ACCCACATGTGTACATCATG+TGG 0.700849 4.1:+42161230 None:intergenic
TATGCAGTTTCTCGGCATGG+AGG 0.704407 4.1:-42160532 MS.gene09363:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATATATTAATTTTTTTAT+CGG - chr4.1:42161359-42161378 MS.gene09363:CDS 0.0%
!! TAAAATTAAGTATTCAATAT+TGG - chr4.1:42161419-42161438 MS.gene09363:CDS 10.0%
!!! AAAATTCTAATGATAATTTT+TGG - chr4.1:42160789-42160808 MS.gene09363:CDS 10.0%
!! ATGAAACTTGTAATTAAAAA+AGG + chr4.1:42160313-42160332 None:intergenic 15.0%
!! TCACAATTTATTATCTTTAT+CGG - chr4.1:42160433-42160452 MS.gene09363:CDS 15.0%
!!! ACTTAGTTTTCTTATATTTT+CGG + chr4.1:42159637-42159656 None:intergenic 15.0%
!!! ATTTACAAATTTGATTTCTT+TGG + chr4.1:42159595-42159614 None:intergenic 15.0%
!!! TTGCACAATTTTTTTTTTAA+AGG - chr4.1:42160563-42160582 MS.gene09363:intron 15.0%
!! AAGTAAAATAGTTTGAAAGA+AGG + chr4.1:42160741-42160760 None:intergenic 20.0%
!! TAATTCAATTGAAGATCATT+TGG - chr4.1:42161453-42161472 MS.gene09363:CDS 20.0%
!! TATATATACTATTACATTCG+TGG - chr4.1:42161280-42161299 MS.gene09363:CDS 20.0%
!! TTATCTTATATGCTATCATT+TGG - chr4.1:42160766-42160785 MS.gene09363:CDS 20.0%
!!! ACTTTCTGTTTTAATGAAAA+AGG - chr4.1:42161138-42161157 MS.gene09363:CDS 20.0%
!!! TTGGTATGTTAATATTTTGT+TGG - chr4.1:42161161-42161180 MS.gene09363:CDS 20.0%
!!! TTTGTAAAGTCAAATTTTCT+AGG + chr4.1:42160146-42160165 None:intergenic 20.0%
! AAATTCAAATGTAATGAGAC+TGG + chr4.1:42160911-42160930 None:intergenic 25.0%
! AAGTAGGCATATATAAACAA+AGG + chr4.1:42160046-42160065 None:intergenic 25.0%
! AATATAATAAGCTCAAAACC+TGG - chr4.1:42160590-42160609 MS.gene09363:intron 25.0%
! ACTTTCTAATGTCAAATCAT+TGG - chr4.1:42160244-42160263 MS.gene09363:intron 25.0%
! AGTTTGAAAGAAGGTTAAAT+TGG + chr4.1:42160732-42160751 None:intergenic 25.0%
! CTCATTACATTTGAATTTGT+TGG - chr4.1:42160913-42160932 MS.gene09363:CDS 25.0%
! TAACACTTAATAACAGAAGT+AGG + chr4.1:42160062-42160081 None:intergenic 25.0%
! TCAAAACATAAAAACTGAGT+TGG - chr4.1:42160939-42160958 MS.gene09363:CDS 25.0%
!! AAGTATTCAATATTGGTTAC+AGG - chr4.1:42161426-42161445 MS.gene09363:CDS 25.0%
!!! TCTGTTTTAATGAAAAAGGT+TGG - chr4.1:42161142-42161161 MS.gene09363:CDS 25.0%
!!! TTCTCTTGTTGATTTTTCAT+TGG - chr4.1:42160118-42160137 MS.gene09363:intron 25.0%
AAAAAAAGTTCCTCCAAATG+TGG + chr4.1:42159966-42159985 None:intergenic 30.0%
AAATATCTGAGAATTGCAGT+TGG - chr4.1:42160459-42160478 MS.gene09363:CDS 30.0%
AATGTCTGTAAGAGTAAGAA+AGG + chr4.1:42161220-42161239 None:intergenic 30.0%
AATTTGTATACAGTCCTGAA+GGG - chr4.1:42160221-42160240 MS.gene09363:intron 30.0%
AGATGAAGAATCTTTAGTGA+CGG + chr4.1:42159870-42159889 None:intergenic 30.0%
AGTAGAAAAAAGTTTACGCA+AGG - chr4.1:42161041-42161060 MS.gene09363:CDS 30.0%
GAGATATAAAGTTGTGTTGA+TGG + chr4.1:42161251-42161270 None:intergenic 30.0%
GATCTCAATAAGTTTCTATC+TGG - chr4.1:42159936-42159955 MS.gene09363:CDS 30.0%
GTAGAAAAAAGTTTACGCAA+GGG - chr4.1:42161042-42161061 MS.gene09363:CDS 30.0%
TACAAATTGTTAAAATCCGC+AGG + chr4.1:42160209-42160228 None:intergenic 30.0%
TAGAAAAAAGTTTACGCAAG+GGG - chr4.1:42161043-42161062 MS.gene09363:CDS 30.0%
TGAAAGAAGGTTAAATTGGA+AGG + chr4.1:42160728-42160747 None:intergenic 30.0%
TGATTTCTTTGGATAACACA+GGG + chr4.1:42159584-42159603 None:intergenic 30.0%
TGTCTTCAAAAAGTGAAAAG+AGG + chr4.1:42160018-42160037 None:intergenic 30.0%
TTGATTTCTTTGGATAACAC+AGG + chr4.1:42159585-42159604 None:intergenic 30.0%
! AAAAAATCTTATTGCCGCTT+AGG - chr4.1:42159760-42159779 MS.gene09363:intron 30.0%
! AACTATACGTATCTTTTGCT+AGG + chr4.1:42160633-42160652 None:intergenic 30.0%
! ATCTTTGTTATGCAGTTTCT+CGG - chr4.1:42160371-42160390 MS.gene09363:intron 30.0%
! ATTGCAAGATCCTTAAGTTT+TGG + chr4.1:42160515-42160534 None:intergenic 30.0%
! ATTTTGTTGGTATGATGTTG+TGG - chr4.1:42161174-42161193 MS.gene09363:CDS 30.0%
! GAAAGTATATAGACTCTGTA+TGG + chr4.1:42161124-42161143 None:intergenic 30.0%
! TATTTTCATTTGTAAGCCTG+CGG - chr4.1:42160190-42160209 MS.gene09363:intron 30.0%
! TTTTGTTGGTATGATGTTGT+GGG - chr4.1:42161175-42161194 MS.gene09363:CDS 30.0%
!! TACTCTTCTTTTCTTTGAAG+TGG + chr4.1:42161025-42161044 None:intergenic 30.0%
!! TATAAAGTTGTGTTGATGGT+CGG + chr4.1:42161247-42161266 None:intergenic 30.0%
!!! ACTCTTCTTTTCTTTGAAGT+GGG + chr4.1:42161024-42161043 None:intergenic 30.0%
AATAGCAGCTTCATCAAGAT+TGG + chr4.1:42160174-42160193 None:intergenic 35.0%
ACACAATGCACCAAAACTTA+AGG - chr4.1:42160502-42160521 MS.gene09363:CDS 35.0%
ACATGTTCTATAGGACTCTT+TGG + chr4.1:42159487-42159506 None:intergenic 35.0%
ACTTAAGGATCTTGCAATTG+AGG - chr4.1:42160517-42160536 MS.gene09363:CDS 35.0%
AGAGAAAGATCTTCAAGTGA+CGG + chr4.1:42160104-42160123 None:intergenic 35.0%
ATGTGTTCTATCCACAAGAT+GGG - chr4.1:42159503-42159522 MS.gene09363:intron 35.0%
CAATTTGTATACAGTCCTGA+AGG - chr4.1:42160220-42160239 MS.gene09363:intron 35.0%
GGATAGAACACATGTTCTAT+AGG + chr4.1:42159496-42159515 None:intergenic 35.0%
GGTAATTGAAAGTGAAGGTT+GGG + chr4.1:42159549-42159568 None:intergenic 35.0%
TCTCTGGTAATTGAAAGTGA+AGG + chr4.1:42159554-42159573 None:intergenic 35.0%
TGAAAAGAAGACTTGAGTGT+TGG + chr4.1:42159837-42159856 None:intergenic 35.0%
TGAAATCAATTCCCGAAGAA+AGG - chr4.1:42160831-42160850 MS.gene09363:CDS 35.0%
TGGTAATTGAAAGTGAAGGT+TGG + chr4.1:42159550-42159569 None:intergenic 35.0%
TTTGTTGGTATGATGTTGTG+GGG - chr4.1:42161176-42161195 MS.gene09363:CDS 35.0%
!! AAGTGAAAAGAGGTGTTGAT+AGG + chr4.1:42160008-42160027 None:intergenic 35.0%
!! CTAAGTCTTGATAGTGAGAA+TGG - chr4.1:42159651-42159670 MS.gene09363:intron 35.0%
!! TTATATTTTCGGTGCGTCTT+AGG + chr4.1:42159626-42159645 None:intergenic 35.0%
!! TTCAAAGGCATTAGATCTCA+AGG - chr4.1:42159704-42159723 MS.gene09363:intron 35.0%
!!! GCGGCAATAAGATTTTTTCA+TGG + chr4.1:42159758-42159777 None:intergenic 35.0%
!!! TGGAGGAACTTTTTTTAGCT+GGG - chr4.1:42159970-42159989 MS.gene09363:CDS 35.0%
!!! TTGGAGGAACTTTTTTTAGC+TGG - chr4.1:42159969-42159988 MS.gene09363:CDS 35.0%
AAAGTGAAGGTTGGGAATCT+TGG + chr4.1:42159541-42159560 None:intergenic 40.0%
AACTCGTACCCATACTAGTA+CGG + chr4.1:42161082-42161101 None:intergenic 40.0%
AATCAATTCCCGAAGAAAGG+AGG - chr4.1:42160834-42160853 MS.gene09363:CDS 40.0%
ACATGTGTACATCATGTGGT+AGG + chr4.1:42159680-42159699 None:intergenic 40.0%
ACCACATGATGTACACATGT+GGG - chr4.1:42159680-42159699 MS.gene09363:intron 40.0%
AGAAAGATCTTCAAGTGACG+GGG + chr4.1:42160102-42160121 None:intergenic 40.0%
AGAAATCCTCCGTACTAGTA+TGG - chr4.1:42161070-42161089 MS.gene09363:CDS 40.0%
AGATCATTTGGATGCCTTCA+AGG - chr4.1:42161465-42161484 MS.gene09363:CDS 40.0%
AGTTTCCAACCTCCTTTCTT+CGG + chr4.1:42160846-42160865 None:intergenic 40.0%
CATGTGTTCTATCCACAAGA+TGG - chr4.1:42159502-42159521 MS.gene09363:intron 40.0%
GAAATCCTCCGTACTAGTAT+GGG - chr4.1:42161071-42161090 MS.gene09363:CDS 40.0%
GAGAAAGATCTTCAAGTGAC+GGG + chr4.1:42160103-42160122 None:intergenic 40.0%
GAGATCTTCAATACCCTTGA+AGG + chr4.1:42161482-42161501 None:intergenic 40.0%
GATCATTTGGATGCCTTCAA+GGG - chr4.1:42161466-42161485 MS.gene09363:CDS 40.0%
GTTCTATAGGACTCTTTGGT+TGG + chr4.1:42159483-42159502 None:intergenic 40.0%
TACCACATGATGTACACATG+TGG - chr4.1:42159679-42159698 MS.gene09363:intron 40.0%
TATAGGACTCTTTGGTTGGT+AGG + chr4.1:42159479-42159498 None:intergenic 40.0%
TCACTCAAGTAAGCTAGAGA+AGG - chr4.1:42160984-42161003 MS.gene09363:CDS 40.0%
TCTATCTGGTTGTCCACATT+TGG - chr4.1:42159950-42159969 MS.gene09363:CDS 40.0%
TCTTCATCTCCACGAAAATG+TGG - chr4.1:42159881-42159900 MS.gene09363:CDS 40.0%
TGACATTAGAAAGTCCCTTC+AGG + chr4.1:42160238-42160257 None:intergenic 40.0%
TGTACACATGTGGGTTTCAA+AGG - chr4.1:42159689-42159708 MS.gene09363:intron 40.0%
! ACTCGTGGTCTTAAAATTCC+GGG - chr4.1:42159800-42159819 MS.gene09363:intron 40.0%
! CACTCGTGGTCTTAAAATTC+CGG - chr4.1:42159799-42159818 MS.gene09363:intron 40.0%
! TAGAATACGCCACATTTTCG+TGG + chr4.1:42159893-42159912 None:intergenic 40.0%
!! GGTGTTGATAGGTAATGCAA+AGG + chr4.1:42159997-42160016 None:intergenic 40.0%
AACACAGGGTCTGAATTCTC+TGG + chr4.1:42159570-42159589 None:intergenic 45.0%
AATTCCCGAAGAAAGGAGGT+TGG - chr4.1:42160838-42160857 MS.gene09363:CDS 45.0%
ACAGATCCAAGTCAAGTTCC+TGG + chr4.1:42159731-42159750 None:intergenic 45.0%
ACCCACATGTGTACATCATG+TGG + chr4.1:42159684-42159703 None:intergenic 45.0%
AGACATGCCGGAGATATCAA+TGG + chr4.1:42160883-42160902 None:intergenic 45.0%
ATCTGGTTGTCCACATTTGG+AGG - chr4.1:42159953-42159972 MS.gene09363:CDS 45.0%
GTTTCCAACCTCCTTTCTTC+GGG + chr4.1:42160845-42160864 None:intergenic 45.0%
TCACACATGGAAAGCCTAAG+CGG + chr4.1:42159777-42159796 None:intergenic 45.0%
TGTTATGCAGTTTCTCGGCA+TGG - chr4.1:42160376-42160395 MS.gene09363:intron 45.0%
! AGACTGGTTGTAAGACATGC+CGG + chr4.1:42160895-42160914 None:intergenic 45.0%
! CTCGTGGTCTTAAAATTCCG+GGG - chr4.1:42159801-42159820 MS.gene09363:intron 45.0%
!! GACGGGGCATTAATTTGTAG+TGG + chr4.1:42160086-42160105 None:intergenic 45.0%
!!! ATATATTTAAAAATTTTAAG+AGG + chr4.1:42161347-42161366 None:intergenic 5.0%
AGGAGGTTGGAAACTCGAGT+TGG - chr4.1:42160851-42160870 MS.gene09363:CDS 50.0%
CAAGGTCCAGGAACTTGACT+TGG - chr4.1:42159722-42159741 MS.gene09363:intron 50.0%
GGAGGTTGGAAACTCGAGTT+GGG - chr4.1:42160852-42160871 MS.gene09363:CDS 50.0%
GGCATTAGATCTCAAGGTCC+AGG - chr4.1:42159710-42159729 MS.gene09363:intron 50.0%
GGTGGAGCCATTGATATCTC+CGG - chr4.1:42160873-42160892 MS.gene09363:CDS 50.0%
GTCTTTGCTCTTCTTGTGCC+AGG + chr4.1:42160611-42160630 None:intergenic 50.0%
GTTGGTATGATGTTGTGGGG+TGG - chr4.1:42161179-42161198 MS.gene09363:CDS 50.0%
TATGCAGTTTCTCGGCATGG+AGG - chr4.1:42160379-42160398 MS.gene09363:intron 50.0%
TCGTACCCATACTAGTACGG+AGG + chr4.1:42161079-42161098 None:intergenic 50.0%
TTCCATGTGTGAGTCACTCG+TGG - chr4.1:42159785-42159804 MS.gene09363:intron 50.0%
!! GTGTTGGTTGAATTCTGCCC+CGG + chr4.1:42159821-42159840 None:intergenic 50.0%
GACCACGAGTGACTCACACA+TGG + chr4.1:42159790-42159809 None:intergenic 55.0%
! GCAGATCGACTCCCATCTTG+TGG + chr4.1:42159517-42159536 None:intergenic 55.0%
!! GGTTGGAAACTCGAGTTGGG+TGG - chr4.1:42160855-42160874 MS.gene09363:CDS 55.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 42159402 42161531 42159402 ID=MS.gene09363
chr4.1 mRNA 42159402 42161531 42159402 ID=MS.gene09363.t1;Parent=MS.gene09363
chr4.1 exon 42160644 42161531 42160644 ID=MS.gene09363.t1.exon1;Parent=MS.gene09363.t1
chr4.1 CDS 42160644 42161531 42160644 ID=cds.MS.gene09363.t1;Parent=MS.gene09363.t1
chr4.1 exon 42160395 42160547 42160395 ID=MS.gene09363.t1.exon2;Parent=MS.gene09363.t1
chr4.1 CDS 42160395 42160547 42160395 ID=cds.MS.gene09363.t1;Parent=MS.gene09363.t1
chr4.1 exon 42159841 42160110 42159841 ID=MS.gene09363.t1.exon3;Parent=MS.gene09363.t1
chr4.1 CDS 42159841 42160110 42159841 ID=cds.MS.gene09363.t1;Parent=MS.gene09363.t1
chr4.1 exon 42159402 42159485 42159402 ID=MS.gene09363.t1.exon4;Parent=MS.gene09363.t1
chr4.1 CDS 42159402 42159485 42159402 ID=cds.MS.gene09363.t1;Parent=MS.gene09363.t1
Gene Sequence

>MS.gene09363

ATGGCGTGCTCTGATGAAGAACATGATCGATTAAGCAATCTCTCAGACGATTTGATTTGTCATATTTTGTCTTTCCTACCAACCAAAGAGTCCTATAGAACATGTGTTCTATCCACAAGATGGGAGTCGATCTGCACCAAGATTCCCAACCTTCACTTTCAATTACCAGAGAATTCAGACCCTGTGTTATCCAAAGAAATCAAATTTGTAAATGTTGCTCTCCTAAGACGCACCGAAAATATAAGAAAACTAAGTCTTGATAGTGAGAATGGCTGCCTACCACATGATGTACACATGTGGGTTTCAAAGGCATTAGATCTCAAGGTCCAGGAACTTGACTTGGATCTGTTTCGCCATGAAAAAATCTTATTGCCGCTTAGGCTTTCCATGTGTGAGTCACTCGTGGTCTTAAAATTCCGGGGCAGAATTCAACCAACACTCAAGTCTTCTTTTCATGTATATTTACCGTCACTAAAGATTCTTCATCTCCACGAAAATGTGGCGTATTCTATCTTTGATGATTGTGCAGAGTATGATCTCAATAAGTTTCTATCTGGTTGTCCACATTTGGAGGAACTTTTTTTAGCTGGGACCTTTGCATTACCTATCAACACCTCTTTTCACTTTTTGAAGACATTATGCCTTTGTTTATATATGCCTACTTCTGTTATTAAGTGTTATCCACTACAAATTAATGCCCCGTCACTTGAAGATCTTTCTCTTGTTGATTTTTCATTGGCTCCTAGAAAATTTGACTTTACAAATTTGTCCAATCTTGATGAAGCTGCTATTTTCATTTGTAAGCCTGCGGATTTTAACAATTTGTATACAGTCCTGAAGGGACTTTCTAATGTCAAATCATTGGCTCTCGATTCTAACACTTTTCATGTAAGTTTCATAAATATTTTCCTTTTTTAATTACAAGTTTCATATTTAGTCACTCATATGCAATTCTATTCTTATTTTATCATCTTTGTTATGCAGTTTCTCGGCATGGAGGACAAACTTGACAACTTACATCTTCTCACTTTTCACAATTTATTATCTTTATCGGTTGAAATATCTGAGAATTGCAGTTGGAATATGCTTGTCAGCTTTCTACACAATGCACCAAAACTTAAGGATCTTGCAATTGAGGTGTGAATGATTTTTTAACTATATTTGCACAATTTTTTTTTTAAAGGATAAAATATAATAAGCTCAAAACCTGGCACAAGAAGAGCAAAGACCTAGCAAAAGATACGTATAGTTTGCAAATAAAACAGATCAACAAATTAATTAATTCAATACAATCTATATATGATCTATATTTGTGTAGATTGTCCTTCCAATTTAACCTTCTTTCAAACTATTTTACTTACAATTTATCTTATATGCTATCATTTGGAAAATTCTAATGATAATTTTTGGTTTACATGCAGAGTAAAATTGAAATCAATTCCCGAAGAAAGGAGGTTGGAAACTCGAGTTGGGTGGAGCCATTGATATCTCCGGCATGTCTTACAACCAGTCTCATTACATTTGAATTTGTTGGAATTCAAAACATAAAAACTGAGTTGGACTTTACGCGATATATTGTAAGTCACTCAAGTAAGCTAGAGAAGGTAAAGATTTTCACACCCACTTCAAAGAAAAGAAGAGTAGAAAAAAGTTTACGCAAGGGGTCAAAGAAATCCTCCGTACTAGTATGGGTACGAGTTTTACACACTTTCTTTTCTTCCATACAGAGTCTATATACTTTCTGTTTTAATGAAAAAGGTTGGTATGTTAATATTTTGTTGGTATGATGTTGTGGGGTGGTGATAGAACTTTCATCCTTTCTTACTCTTACAGACATTAACTCCGACCATCAACACAACTTTATATCTCTTGAATGTATATATATACTATTACATTCGTGGTTGAGAATAAGACTGTTTTTCTTAAAATATGTAAATTATATCCTCTTAAAATTTTTAAATATATTAATTTTTTTATCGGTATACTTTAATGATTTTATCATTTATATTTATAATCTTAAAATTAAGTATTCAATATTGGTTACAGGATATTAATTCAATTGAAGATCATTTGGATGCCTTCAAGGGTATTGAAGATCTCTTTTTTGAGCTGTTCTTGCCCAATAAATAA

Protein sequence

>MS.gene09363.t1

MACSDEEHDRLSNLSDDLICHILSFLPTKESYRTCVLSTRWESICTKIPNLHFQLPENSDPVLSKEIKFVNVALLRRTENIRKLSLDSENGCLPHDVHMWVSKALDLKVQELDLDLFRHEKILLPLRLSMCESLVVLKFRGRIQPTLKSSFHVYLPSLKILHLHENVAYSIFDDCAEYDLNKFLSGCPHLEELFLAGTFALPINTSFHFLKTLCLCLYMPTSVIKCYPLQINAPSLEDLSLVDFSLAPRKFDFTNLSNLDEAAIFICKPADFNNLYTVLKGLSNVKSLALDSNTFHFLGMEDKLDNLHLLTFHNLLSLSVEISENCSWNMLVSFLHNAPKLKDLAIESKIEINSRRKEVGNSSWVEPLISPACLTTSLITFEFVGIQNIKTELDFTRYIVSHSSKLEKVKIFTPTSKKRRVEKSLRKGSKKSSVLVWDINSIEDHLDAFKGIEDLFFELFLPNK