Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03749.t1 | XP_024638552.1 | 89.2 | 501 | 46 | 3 | 1 | 493 | 1 | 501 | 2.40E-229 | 804.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03749.t1 | Q3EAE5 | 27.2 | 475 | 264 | 16 | 9 | 456 | 2 | 421 | 4.9e-21 | 104.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03749.t1 | A0A072UVN2 | 89.2 | 501 | 46 | 3 | 1 | 493 | 1 | 501 | 1.8e-229 | 804.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03749.t1 | MTR_4g055990 | 88.224 | 501 | 51 | 3 | 1 | 493 | 1 | 501 | 0.0 | 877 |
MS.gene03749.t1 | MTR_4g055990 | 88.309 | 479 | 48 | 3 | 1 | 471 | 1 | 479 | 0.0 | 839 |
MS.gene03749.t1 | MTR_4g055580 | 84.725 | 491 | 73 | 1 | 1 | 489 | 92 | 582 | 0.0 | 827 |
MS.gene03749.t1 | MTR_4g056020 | 83.401 | 494 | 46 | 3 | 1 | 493 | 1 | 459 | 0.0 | 812 |
MS.gene03749.t1 | MTR_4g056040 | 79.873 | 472 | 89 | 3 | 1 | 471 | 1 | 467 | 0.0 | 751 |
MS.gene03749.t1 | MTR_4g056030 | 78.008 | 482 | 70 | 3 | 1 | 481 | 1 | 447 | 0.0 | 738 |
MS.gene03749.t1 | MTR_4g056070 | 82.151 | 437 | 72 | 3 | 1 | 431 | 1 | 437 | 0.0 | 710 |
MS.gene03749.t1 | MTR_1g038710 | 63.711 | 485 | 128 | 7 | 1 | 476 | 11 | 456 | 0.0 | 557 |
MS.gene03749.t1 | MTR_1g090883 | 55.641 | 390 | 129 | 7 | 2 | 386 | 12 | 362 | 9.65e-130 | 381 |
MS.gene03749.t1 | MTR_7g110920 | 56.425 | 358 | 98 | 5 | 134 | 471 | 1 | 320 | 2.11e-123 | 363 |
MS.gene03749.t1 | MTR_4g056020 | 89.571 | 163 | 17 | 0 | 331 | 493 | 1 | 163 | 1.76e-100 | 299 |
MS.gene03749.t1 | MTR_4g093690 | 51.140 | 307 | 105 | 8 | 1 | 302 | 10 | 276 | 1.29e-78 | 247 |
MS.gene03749.t1 | MTR_4g056010 | 93.000 | 100 | 7 | 0 | 103 | 202 | 1 | 100 | 1.55e-58 | 188 |
MS.gene03749.t1 | MTR_1g090900 | 52.336 | 214 | 60 | 5 | 1 | 209 | 1 | 177 | 4.15e-53 | 178 |
MS.gene03749.t1 | MTR_1g090890 | 61.538 | 91 | 29 | 2 | 384 | 471 | 29 | 116 | 3.92e-29 | 111 |
MS.gene03749.t1 | MTR_5g084070 | 27.629 | 485 | 271 | 17 | 5 | 473 | 9 | 429 | 7.57e-28 | 115 |
MS.gene03749.t1 | MTR_5g080710 | 28.097 | 452 | 248 | 15 | 9 | 446 | 33 | 421 | 9.88e-27 | 112 |
MS.gene03749.t1 | MTR_8g014260 | 27.778 | 468 | 252 | 15 | 6 | 447 | 13 | 420 | 1.68e-25 | 109 |
MS.gene03749.t1 | MTR_4g032730 | 28.243 | 478 | 246 | 22 | 9 | 445 | 15 | 436 | 3.32e-24 | 105 |
MS.gene03749.t1 | MTR_7g056433 | 27.394 | 449 | 220 | 18 | 4 | 445 | 7 | 356 | 4.50e-24 | 104 |
MS.gene03749.t1 | MTR_8g445780 | 27.477 | 444 | 237 | 15 | 7 | 430 | 11 | 389 | 4.35e-22 | 98.6 |
MS.gene03749.t1 | MTR_8g062270 | 27.556 | 450 | 272 | 18 | 9 | 445 | 16 | 424 | 1.72e-21 | 97.4 |
MS.gene03749.t1 | MTR_7g115270 | 25.727 | 447 | 233 | 14 | 9 | 445 | 12 | 369 | 1.69e-20 | 94.0 |
MS.gene03749.t1 | MTR_8g058970 | 26.282 | 468 | 280 | 17 | 4 | 445 | 14 | 442 | 5.39e-20 | 93.2 |
MS.gene03749.t1 | MTR_8g468810 | 26.840 | 462 | 265 | 17 | 4 | 445 | 20 | 428 | 8.63e-20 | 92.4 |
MS.gene03749.t1 | MTR_8g467800 | 27.009 | 448 | 258 | 14 | 5 | 434 | 16 | 412 | 1.16e-19 | 92.0 |
MS.gene03749.t1 | MTR_2g007400 | 24.846 | 487 | 250 | 20 | 9 | 474 | 12 | 403 | 8.45e-19 | 89.0 |
MS.gene03749.t1 | MTR_7g098570 | 26.009 | 446 | 216 | 15 | 9 | 445 | 20 | 360 | 3.68e-18 | 87.4 |
MS.gene03749.t1 | MTR_8g468840 | 25.934 | 455 | 273 | 16 | 8 | 445 | 13 | 420 | 3.74e-18 | 87.0 |
MS.gene03749.t1 | MTR_2g083840 | 27.234 | 470 | 241 | 19 | 9 | 445 | 21 | 422 | 1.92e-17 | 85.1 |
MS.gene03749.t1 | MTR_5g007410 | 26.196 | 439 | 229 | 20 | 11 | 445 | 28 | 375 | 2.77e-17 | 84.7 |
MS.gene03749.t1 | MTR_8g014160 | 26.813 | 455 | 223 | 18 | 4 | 445 | 36 | 393 | 3.25e-17 | 84.3 |
MS.gene03749.t1 | MTR_1g041245 | 30.317 | 221 | 113 | 6 | 9 | 228 | 11 | 191 | 3.91e-16 | 80.5 |
MS.gene03749.t1 | MTR_3g109982 | 25.413 | 484 | 260 | 16 | 9 | 445 | 13 | 442 | 5.70e-16 | 81.3 |
MS.gene03749.t1 | MTR_4g080773 | 27.155 | 464 | 263 | 19 | 9 | 445 | 19 | 434 | 2.95e-15 | 78.6 |
MS.gene03749.t1 | MTR_4g080773 | 27.155 | 464 | 263 | 19 | 9 | 445 | 19 | 434 | 4.45e-15 | 77.8 |
MS.gene03749.t1 | MTR_8g017280 | 28.521 | 284 | 149 | 12 | 7 | 285 | 34 | 268 | 2.03e-14 | 74.3 |
MS.gene03749.t1 | MTR_4g080787 | 25.806 | 465 | 265 | 19 | 9 | 445 | 19 | 431 | 3.52e-14 | 75.1 |
MS.gene03749.t1 | MTR_8g017280 | 28.723 | 282 | 147 | 12 | 9 | 285 | 36 | 268 | 4.78e-14 | 74.3 |
MS.gene03749.t1 | MTR_5g058100 | 25.210 | 476 | 242 | 19 | 1 | 467 | 1 | 371 | 5.62e-14 | 73.9 |
MS.gene03749.t1 | MTR_8g468810 | 27.596 | 337 | 181 | 13 | 4 | 324 | 20 | 309 | 1.22e-13 | 72.4 |
MS.gene03749.t1 | MTR_8g468810 | 27.596 | 337 | 181 | 13 | 4 | 324 | 20 | 309 | 1.26e-13 | 72.4 |
MS.gene03749.t1 | MTR_1g085120 | 26.432 | 454 | 235 | 21 | 9 | 458 | 92 | 450 | 1.43e-13 | 73.2 |
MS.gene03749.t1 | MTR_8g468810 | 27.596 | 337 | 181 | 13 | 4 | 324 | 20 | 309 | 1.62e-13 | 72.4 |
MS.gene03749.t1 | MTR_1g085120 | 26.432 | 454 | 235 | 21 | 9 | 458 | 167 | 525 | 2.32e-13 | 72.8 |
MS.gene03749.t1 | MTR_3g048290 | 26.293 | 464 | 269 | 17 | 5 | 445 | 19 | 432 | 2.89e-13 | 72.4 |
MS.gene03749.t1 | MTR_8g467800 | 27.941 | 340 | 181 | 11 | 5 | 328 | 16 | 307 | 3.11e-13 | 71.2 |
MS.gene03749.t1 | MTR_8g058965 | 26.141 | 482 | 250 | 23 | 9 | 450 | 13 | 428 | 2.63e-12 | 69.3 |
MS.gene03749.t1 | MTR_6g029350 | 28.507 | 221 | 127 | 9 | 267 | 479 | 6 | 203 | 4.60e-12 | 66.2 |
MS.gene03749.t1 | MTR_3g023630 | 23.490 | 447 | 223 | 16 | 9 | 445 | 8 | 345 | 5.64e-12 | 67.8 |
MS.gene03749.t1 | MTR_5g008950 | 31.132 | 106 | 68 | 2 | 345 | 447 | 233 | 336 | 9.32e-12 | 67.0 |
MS.gene03749.t1 | MTR_3g087260 | 27.500 | 480 | 238 | 20 | 9 | 445 | 12 | 424 | 9.39e-12 | 67.4 |
MS.gene03749.t1 | MTR_7g110910 | 81.579 | 38 | 7 | 0 | 1 | 38 | 158 | 195 | 1.96e-11 | 63.5 |
MS.gene03749.t1 | MTR_1g066830 | 23.556 | 450 | 251 | 18 | 9 | 457 | 8 | 365 | 2.18e-11 | 65.9 |
MS.gene03749.t1 | MTR_5g045170 | 29.279 | 222 | 111 | 8 | 11 | 228 | 16 | 195 | 6.70e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03749.t1 | AT4G10400 | 28.419 | 468 | 259 | 17 | 9 | 467 | 2 | 402 | 1.32e-29 | 120 |
MS.gene03749.t1 | AT4G10400 | 28.419 | 468 | 259 | 17 | 9 | 467 | 2 | 402 | 1.32e-29 | 120 |
MS.gene03749.t1 | AT4G10400 | 28.419 | 468 | 259 | 17 | 9 | 467 | 2 | 402 | 1.32e-29 | 120 |
MS.gene03749.t1 | AT4G14103 | 30.467 | 407 | 208 | 16 | 9 | 390 | 8 | 364 | 2.55e-27 | 113 |
MS.gene03749.t1 | AT4G14103 | 30.467 | 407 | 208 | 16 | 9 | 390 | 8 | 364 | 2.55e-27 | 113 |
MS.gene03749.t1 | AT4G14103 | 31.017 | 403 | 202 | 17 | 9 | 386 | 8 | 359 | 3.36e-27 | 114 |
MS.gene03749.t1 | AT3G59190 | 29.188 | 394 | 217 | 12 | 9 | 378 | 12 | 367 | 1.76e-26 | 111 |
MS.gene03749.t1 | AT5G62970 | 30.599 | 451 | 263 | 22 | 9 | 445 | 2 | 416 | 1.93e-26 | 112 |
MS.gene03749.t1 | AT3G59160 | 27.338 | 417 | 248 | 13 | 9 | 394 | 13 | 405 | 2.59e-26 | 112 |
MS.gene03749.t1 | AT3G59190 | 29.188 | 394 | 217 | 12 | 9 | 378 | 12 | 367 | 5.16e-26 | 111 |
MS.gene03749.t1 | AT1G55660 | 27.932 | 469 | 254 | 19 | 9 | 450 | 53 | 464 | 1.14e-25 | 110 |
MS.gene03749.t1 | AT4G00315 | 27.917 | 480 | 254 | 19 | 9 | 456 | 2 | 421 | 2.06e-25 | 108 |
MS.gene03749.t1 | AT3G59170 | 29.529 | 403 | 230 | 14 | 9 | 379 | 7 | 387 | 3.13e-25 | 108 |
MS.gene03749.t1 | AT3G59230 | 27.536 | 483 | 262 | 16 | 9 | 450 | 12 | 447 | 7.93e-25 | 107 |
MS.gene03749.t1 | AT4G26340 | 26.829 | 451 | 260 | 16 | 9 | 450 | 2 | 391 | 9.98e-25 | 106 |
MS.gene03749.t1 | AT2G26860 | 27.902 | 448 | 259 | 14 | 9 | 445 | 2 | 396 | 1.06e-24 | 106 |
MS.gene03749.t1 | AT2G26860 | 27.902 | 448 | 259 | 14 | 9 | 445 | 2 | 396 | 1.06e-24 | 106 |
MS.gene03749.t1 | AT1G58310 | 30.127 | 395 | 225 | 13 | 9 | 379 | 8 | 375 | 1.30e-24 | 107 |
MS.gene03749.t1 | AT5G56380 | 25.941 | 478 | 270 | 15 | 9 | 461 | 2 | 420 | 7.33e-24 | 104 |
MS.gene03749.t1 | AT5G56380 | 25.941 | 478 | 270 | 15 | 9 | 461 | 2 | 420 | 7.33e-24 | 104 |
MS.gene03749.t1 | AT1G51370 | 29.122 | 467 | 242 | 21 | 7 | 454 | 17 | 413 | 1.02e-23 | 103 |
MS.gene03749.t1 | AT4G14096 | 28.645 | 391 | 207 | 15 | 8 | 378 | 7 | 345 | 8.45e-23 | 101 |
MS.gene03749.t1 | AT4G14096 | 28.645 | 391 | 207 | 15 | 8 | 378 | 7 | 345 | 8.45e-23 | 101 |
MS.gene03749.t1 | AT3G50710 | 26.754 | 456 | 243 | 15 | 9 | 441 | 2 | 389 | 2.68e-22 | 99.8 |
MS.gene03749.t1 | AT5G38590 | 26.395 | 466 | 262 | 15 | 9 | 459 | 2 | 401 | 3.45e-22 | 99.0 |
MS.gene03749.t1 | AT5G60610 | 27.252 | 444 | 257 | 14 | 9 | 445 | 2 | 386 | 7.03e-22 | 97.8 |
MS.gene03749.t1 | AT5G60610 | 27.252 | 444 | 257 | 14 | 9 | 445 | 2 | 386 | 7.03e-22 | 97.8 |
MS.gene03749.t1 | AT5G38396 | 28.283 | 396 | 220 | 14 | 9 | 380 | 2 | 357 | 1.02e-21 | 98.2 |
MS.gene03749.t1 | AT4G13965 | 26.898 | 461 | 257 | 21 | 9 | 456 | 10 | 403 | 1.15e-21 | 97.8 |
MS.gene03749.t1 | AT5G41830 | 25.869 | 518 | 294 | 18 | 3 | 491 | 7 | 463 | 7.60e-21 | 95.9 |
MS.gene03749.t1 | AT4G00320 | 28.266 | 421 | 234 | 15 | 3 | 395 | 7 | 387 | 2.09e-20 | 94.4 |
MS.gene03749.t1 | AT3G59200 | 26.708 | 483 | 262 | 20 | 8 | 450 | 6 | 436 | 2.77e-20 | 94.4 |
MS.gene03749.t1 | AT5G56370 | 27.601 | 471 | 249 | 21 | 9 | 462 | 2 | 397 | 4.02e-20 | 93.2 |
MS.gene03749.t1 | AT5G56370 | 27.601 | 471 | 249 | 21 | 9 | 462 | 2 | 397 | 4.02e-20 | 93.2 |
MS.gene03749.t1 | AT3G52680 | 25.887 | 479 | 245 | 16 | 9 | 457 | 21 | 419 | 5.60e-20 | 92.8 |
MS.gene03749.t1 | AT2G04230 | 26.151 | 478 | 294 | 17 | 8 | 475 | 12 | 440 | 6.12e-20 | 92.8 |
MS.gene03749.t1 | AT5G41840 | 27.251 | 411 | 220 | 13 | 9 | 380 | 14 | 384 | 8.99e-20 | 92.8 |
MS.gene03749.t1 | AT1G32375 | 26.850 | 473 | 255 | 19 | 9 | 461 | 2 | 403 | 1.13e-19 | 91.7 |
MS.gene03749.t1 | AT1G32375 | 26.850 | 473 | 255 | 19 | 9 | 461 | 2 | 403 | 1.13e-19 | 91.7 |
MS.gene03749.t1 | AT5G56400 | 27.079 | 469 | 240 | 22 | 9 | 451 | 33 | 425 | 1.19e-19 | 92.0 |
MS.gene03749.t1 | AT3G03030 | 27.000 | 400 | 225 | 10 | 9 | 380 | 2 | 362 | 1.44e-19 | 91.7 |
MS.gene03749.t1 | AT3G59210 | 29.146 | 398 | 216 | 15 | 5 | 379 | 3 | 357 | 1.92e-19 | 91.3 |
MS.gene03749.t1 | AT3G59210 | 29.146 | 398 | 216 | 15 | 5 | 379 | 3 | 357 | 1.92e-19 | 91.3 |
MS.gene03749.t1 | AT3G59210 | 29.146 | 398 | 216 | 15 | 5 | 379 | 3 | 357 | 1.92e-19 | 91.3 |
MS.gene03749.t1 | AT3G59210 | 29.146 | 398 | 216 | 15 | 5 | 379 | 3 | 357 | 1.92e-19 | 91.3 |
MS.gene03749.t1 | AT3G59210 | 29.146 | 398 | 216 | 15 | 5 | 379 | 3 | 357 | 1.92e-19 | 91.3 |
MS.gene03749.t1 | AT3G49030 | 26.763 | 482 | 262 | 18 | 7 | 468 | 19 | 429 | 2.07e-19 | 90.9 |
MS.gene03749.t1 | AT1G51370 | 29.535 | 430 | 215 | 20 | 7 | 418 | 17 | 376 | 2.15e-19 | 90.9 |
MS.gene03749.t1 | AT3G62430 | 29.293 | 396 | 200 | 16 | 9 | 380 | 2 | 341 | 2.69e-19 | 90.5 |
MS.gene03749.t1 | AT3G58960 | 25.813 | 492 | 257 | 15 | 9 | 447 | 2 | 438 | 5.91e-19 | 89.7 |
MS.gene03749.t1 | AT4G26350 | 24.348 | 460 | 261 | 16 | 9 | 446 | 2 | 396 | 1.41e-18 | 88.6 |
MS.gene03749.t1 | AT5G56410 | 28.298 | 470 | 272 | 23 | 9 | 459 | 2 | 425 | 1.51e-18 | 89.0 |
MS.gene03749.t1 | AT3G58860 | 27.532 | 385 | 224 | 13 | 6 | 380 | 4 | 343 | 2.83e-18 | 87.8 |
MS.gene03749.t1 | AT3G59200 | 27.451 | 408 | 211 | 17 | 8 | 380 | 6 | 363 | 5.99e-18 | 85.9 |
MS.gene03749.t1 | AT1G78760 | 27.178 | 482 | 240 | 21 | 7 | 453 | 14 | 419 | 1.40e-17 | 85.5 |
MS.gene03749.t1 | AT4G10420 | 27.378 | 347 | 207 | 11 | 134 | 467 | 1 | 315 | 1.75e-17 | 84.0 |
MS.gene03749.t1 | AT1G55660 | 28.696 | 345 | 172 | 15 | 9 | 328 | 53 | 348 | 2.32e-17 | 84.0 |
MS.gene03749.t1 | AT2G26030 | 26.609 | 466 | 253 | 21 | 9 | 443 | 4 | 411 | 2.42e-17 | 84.7 |
MS.gene03749.t1 | AT4G22280 | 28.822 | 399 | 219 | 14 | 9 | 396 | 2 | 346 | 2.74e-17 | 84.3 |
MS.gene03749.t1 | AT2G26030 | 26.782 | 463 | 251 | 21 | 9 | 443 | 4 | 406 | 2.75e-17 | 84.7 |
MS.gene03749.t1 | AT2G26030 | 26.782 | 463 | 251 | 21 | 9 | 443 | 4 | 406 | 2.75e-17 | 84.7 |
MS.gene03749.t1 | AT1G51370 | 28.792 | 389 | 197 | 16 | 7 | 381 | 17 | 339 | 1.08e-16 | 82.0 |
MS.gene03749.t1 | AT4G22280 | 29.688 | 384 | 203 | 15 | 9 | 380 | 2 | 330 | 2.27e-16 | 80.9 |
MS.gene03749.t1 | AT3G58920 | 26.667 | 405 | 223 | 14 | 9 | 380 | 2 | 365 | 2.68e-16 | 81.6 |
MS.gene03749.t1 | AT3G58930 | 27.119 | 413 | 214 | 13 | 9 | 380 | 2 | 368 | 2.82e-16 | 81.6 |
MS.gene03749.t1 | AT3G58930 | 27.119 | 413 | 214 | 13 | 9 | 380 | 2 | 368 | 2.82e-16 | 81.6 |
MS.gene03749.t1 | AT3G58930 | 27.119 | 413 | 214 | 13 | 9 | 380 | 2 | 368 | 2.82e-16 | 81.6 |
MS.gene03749.t1 | AT3G58980 | 24.540 | 489 | 281 | 14 | 9 | 470 | 2 | 429 | 4.45e-16 | 81.3 |
MS.gene03749.t1 | AT5G56700 | 30.986 | 355 | 197 | 18 | 110 | 447 | 29 | 352 | 4.69e-16 | 80.1 |
MS.gene03749.t1 | AT2G42730 | 26.681 | 461 | 267 | 18 | 9 | 445 | 5 | 418 | 5.25e-16 | 80.9 |
MS.gene03749.t1 | AT3G58900 | 27.828 | 442 | 245 | 16 | 9 | 419 | 2 | 400 | 7.69e-16 | 80.1 |
MS.gene03749.t1 | AT3G59180 | 26.913 | 379 | 210 | 16 | 118 | 449 | 60 | 418 | 8.34e-16 | 80.1 |
MS.gene03749.t1 | AT1G69630 | 27.295 | 403 | 217 | 14 | 2 | 380 | 11 | 361 | 8.38e-16 | 80.1 |
MS.gene03749.t1 | AT5G53840 | 26.856 | 458 | 249 | 21 | 7 | 445 | 16 | 406 | 1.09e-15 | 79.7 |
MS.gene03749.t1 | AT5G22670 | 26.856 | 458 | 252 | 19 | 8 | 442 | 10 | 407 | 1.10e-15 | 79.7 |
MS.gene03749.t1 | AT3G03040 | 25.743 | 404 | 216 | 11 | 9 | 378 | 2 | 355 | 1.14e-15 | 79.7 |
MS.gene03749.t1 | AT2G42720 | 28.358 | 402 | 199 | 18 | 9 | 379 | 2 | 345 | 1.62e-15 | 79.0 |
MS.gene03749.t1 | AT1G52650 | 25.696 | 467 | 265 | 15 | 9 | 445 | 2 | 416 | 1.81e-15 | 79.0 |
MS.gene03749.t1 | AT4G09920 | 28.354 | 328 | 180 | 12 | 9 | 329 | 2 | 281 | 1.88e-15 | 77.8 |
MS.gene03749.t1 | AT4G09920 | 28.354 | 328 | 180 | 12 | 9 | 329 | 2 | 281 | 1.88e-15 | 77.8 |
MS.gene03749.t1 | AT3G44060 | 29.073 | 399 | 215 | 20 | 14 | 394 | 4 | 352 | 1.96e-15 | 79.0 |
MS.gene03749.t1 | AT3G42770 | 30.330 | 333 | 169 | 14 | 14 | 328 | 4 | 291 | 2.10e-15 | 79.3 |
MS.gene03749.t1 | AT5G15620 | 28.676 | 408 | 209 | 19 | 9 | 391 | 2 | 352 | 2.20e-15 | 78.6 |
MS.gene03749.t1 | AT3G26920 | 26.769 | 325 | 207 | 11 | 126 | 442 | 4 | 305 | 3.01e-15 | 77.4 |
MS.gene03749.t1 | AT3G26920 | 26.769 | 325 | 207 | 11 | 126 | 442 | 4 | 305 | 3.01e-15 | 77.4 |
MS.gene03749.t1 | AT3G26930 | 25.664 | 452 | 252 | 17 | 8 | 443 | 20 | 403 | 4.00e-15 | 77.8 |
MS.gene03749.t1 | AT4G13985 | 26.010 | 396 | 232 | 15 | 4 | 380 | 14 | 367 | 4.00e-15 | 78.2 |
MS.gene03749.t1 | AT1G78750 | 25.124 | 402 | 234 | 14 | 2 | 380 | 11 | 368 | 4.02e-15 | 78.2 |
MS.gene03749.t1 | AT1G78750 | 25.124 | 402 | 234 | 14 | 2 | 380 | 11 | 368 | 4.02e-15 | 78.2 |
MS.gene03749.t1 | AT4G09920 | 28.440 | 327 | 179 | 12 | 9 | 328 | 2 | 280 | 5.43e-15 | 75.9 |
MS.gene03749.t1 | AT4G09920 | 28.440 | 327 | 179 | 12 | 9 | 328 | 2 | 280 | 5.43e-15 | 75.9 |
MS.gene03749.t1 | AT4G09920 | 28.440 | 327 | 179 | 12 | 9 | 328 | 2 | 280 | 5.43e-15 | 75.9 |
MS.gene03749.t1 | AT5G38590 | 27.545 | 334 | 179 | 12 | 9 | 333 | 2 | 281 | 8.08e-15 | 75.5 |
MS.gene03749.t1 | AT4G15060 | 24.945 | 457 | 240 | 18 | 6 | 429 | 23 | 409 | 8.30e-15 | 77.0 |
MS.gene03749.t1 | AT3G54910 | 26.842 | 380 | 243 | 14 | 102 | 472 | 20 | 373 | 9.01e-15 | 76.3 |
MS.gene03749.t1 | AT3G54910 | 26.842 | 380 | 243 | 14 | 102 | 472 | 20 | 373 | 9.01e-15 | 76.3 |
MS.gene03749.t1 | AT3G54910 | 26.842 | 380 | 243 | 14 | 102 | 472 | 20 | 373 | 9.01e-15 | 76.3 |
MS.gene03749.t1 | AT5G56820 | 23.480 | 477 | 271 | 18 | 9 | 468 | 15 | 414 | 1.01e-14 | 76.6 |
MS.gene03749.t1 | AT3G26930 | 27.961 | 304 | 181 | 11 | 153 | 443 | 80 | 358 | 1.03e-14 | 76.3 |
MS.gene03749.t1 | AT3G59240 | 26.154 | 390 | 225 | 14 | 9 | 380 | 8 | 352 | 1.20e-14 | 76.6 |
MS.gene03749.t1 | AT5G53635 | 25.910 | 467 | 249 | 21 | 11 | 445 | 2 | 403 | 3.84e-14 | 74.7 |
MS.gene03749.t1 | AT1G66290 | 25.322 | 466 | 256 | 19 | 4 | 445 | 24 | 421 | 3.84e-14 | 75.1 |
MS.gene03749.t1 | AT1G66310 | 25.667 | 487 | 274 | 19 | 4 | 467 | 14 | 435 | 5.82e-14 | 74.3 |
MS.gene03749.t1 | AT5G41630 | 25.393 | 445 | 249 | 14 | 9 | 411 | 12 | 415 | 8.25e-14 | 73.9 |
MS.gene03749.t1 | AT1G05080 | 26.350 | 463 | 250 | 17 | 8 | 445 | 12 | 408 | 8.29e-14 | 73.9 |
MS.gene03749.t1 | AT5G44950 | 22.961 | 466 | 266 | 14 | 9 | 445 | 4 | 405 | 9.03e-14 | 73.6 |
MS.gene03749.t1 | AT1G13780 | 24.473 | 474 | 256 | 19 | 9 | 443 | 10 | 420 | 1.76e-13 | 72.8 |
MS.gene03749.t1 | AT3G59150 | 25.793 | 473 | 271 | 18 | 9 | 446 | 13 | 440 | 4.87e-13 | 71.6 |
MS.gene03749.t1 | AT1G66320 | 26.431 | 367 | 219 | 17 | 103 | 445 | 87 | 426 | 5.47e-13 | 71.2 |
MS.gene03749.t1 | AT2G29930 | 27.318 | 399 | 200 | 21 | 9 | 380 | 12 | 347 | 9.54e-13 | 70.5 |
MS.gene03749.t1 | AT2G29930 | 27.318 | 399 | 200 | 21 | 9 | 380 | 12 | 347 | 9.54e-13 | 70.5 |
MS.gene03749.t1 | AT5G25860 | 27.320 | 388 | 232 | 18 | 9 | 380 | 12 | 365 | 1.28e-12 | 70.1 |
MS.gene03749.t1 | AT3G58940 | 26.221 | 389 | 217 | 11 | 9 | 380 | 2 | 337 | 1.83e-12 | 70.1 |
MS.gene03749.t1 | AT3G58940 | 26.221 | 389 | 217 | 11 | 9 | 380 | 2 | 337 | 1.83e-12 | 70.1 |
MS.gene03749.t1 | AT5G18770 | 25.595 | 504 | 276 | 20 | 9 | 476 | 24 | 464 | 2.15e-12 | 69.7 |
MS.gene03749.t1 | AT3G58900 | 28.977 | 352 | 183 | 13 | 9 | 332 | 2 | 314 | 2.16e-12 | 68.6 |
MS.gene03749.t1 | AT3G58900 | 29.213 | 356 | 183 | 14 | 9 | 334 | 2 | 318 | 2.22e-12 | 68.6 |
MS.gene03749.t1 | AT3G58900 | 29.213 | 356 | 183 | 14 | 9 | 334 | 2 | 318 | 2.22e-12 | 68.6 |
MS.gene03749.t1 | AT5G56390 | 25.109 | 458 | 259 | 16 | 9 | 447 | 2 | 394 | 3.10e-12 | 68.9 |
MS.gene03749.t1 | AT5G38392 | 33.475 | 236 | 110 | 10 | 9 | 234 | 2 | 200 | 3.69e-12 | 66.2 |
MS.gene03749.t1 | AT5G35995 | 24.747 | 396 | 216 | 15 | 9 | 380 | 5 | 342 | 4.65e-12 | 68.6 |
MS.gene03749.t1 | AT5G35995 | 24.747 | 396 | 216 | 15 | 9 | 380 | 5 | 342 | 4.65e-12 | 68.6 |
MS.gene03749.t1 | AT5G22700 | 23.983 | 467 | 254 | 18 | 9 | 442 | 6 | 404 | 9.70e-12 | 67.4 |
MS.gene03749.t1 | AT5G22700 | 23.983 | 467 | 254 | 18 | 9 | 442 | 6 | 404 | 9.70e-12 | 67.4 |
MS.gene03749.t1 | AT5G22700 | 23.983 | 467 | 254 | 18 | 9 | 442 | 6 | 404 | 9.70e-12 | 67.4 |
MS.gene03749.t1 | AT5G22700 | 23.983 | 467 | 254 | 18 | 9 | 442 | 6 | 404 | 9.70e-12 | 67.4 |
MS.gene03749.t1 | AT3G60040 | 26.494 | 385 | 236 | 14 | 9 | 380 | 13 | 363 | 1.41e-11 | 67.4 |
MS.gene03749.t1 | AT5G22700 | 23.983 | 467 | 254 | 18 | 9 | 442 | 43 | 441 | 1.89e-11 | 66.6 |
MS.gene03749.t1 | AT3G60040 | 26.494 | 385 | 236 | 14 | 9 | 380 | 232 | 582 | 2.09e-11 | 67.0 |
MS.gene03749.t1 | AT3G60040 | 26.494 | 385 | 236 | 14 | 9 | 380 | 230 | 580 | 2.18e-11 | 66.6 |
MS.gene03749.t1 | AT3G60040 | 26.494 | 385 | 236 | 14 | 9 | 380 | 232 | 582 | 2.18e-11 | 67.0 |
MS.gene03749.t1 | AT3G60040 | 26.494 | 385 | 236 | 14 | 9 | 380 | 233 | 583 | 2.30e-11 | 67.0 |
MS.gene03749.t1 | AT5G22660 | 23.983 | 467 | 262 | 17 | 8 | 445 | 12 | 414 | 4.15e-11 | 65.5 |
MS.gene03749.t1 | AT1G66640 | 25.208 | 361 | 216 | 16 | 103 | 445 | 61 | 385 | 4.51e-11 | 65.1 |
MS.gene03749.t1 | AT3G49030 | 24.896 | 482 | 245 | 20 | 7 | 468 | 19 | 403 | 6.57e-11 | 64.7 |
MS.gene03749.t1 | AT3G59000 | 28.745 | 247 | 118 | 9 | 9 | 231 | 2 | 214 | 6.69e-11 | 64.3 |
MS.gene03749.t1 | AT3G59000 | 30.846 | 201 | 107 | 5 | 9 | 204 | 2 | 175 | 9.16e-11 | 64.3 |
Find 94 sgRNAs with CRISPR-Local
Find 126 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCATTACATTTGAATTTAA+AGG | 0.124626 | 4.3:+45072017 | MS.gene03749:CDS |
AGTTTCCAACCTCCTTTCTT+TGG | 0.204522 | 4.3:-45071947 | None:intergenic |
ACTCAAGGATCTTGCAATTA+TGG | 0.222983 | 4.3:+45071583 | MS.gene03749:CDS |
AGAAATCCTCCTTACTAGTA+TGG | 0.274449 | 4.3:+45072174 | MS.gene03749:CDS |
CTGTCTCTCTTGCATTAGTT+TGG | 0.282510 | 4.3:-45070608 | None:intergenic |
CTATATTCTCGGTGCGTCTT+TGG | 0.284156 | 4.3:-45070585 | None:intergenic |
ATTGCAAGATCCTTGAGTTT+TGG | 0.287479 | 4.3:-45071578 | None:intergenic |
GCAGATCGACTCCCATCTTT+TGG | 0.302315 | 4.3:-45070479 | None:intergenic |
TCTATCTGGTTGTCCACATT+TGG | 0.307537 | 4.3:+45071020 | MS.gene03749:CDS |
GTTTCCAACCTCCTTTCTTT+GGG | 0.310062 | 4.3:-45071946 | None:intergenic |
TAATTCAATTGAAGATCATT+TGG | 0.321337 | 4.3:+45072608 | MS.gene03749:CDS |
CATTAGTTTGGCTATATTCT+CGG | 0.336654 | 4.3:-45070596 | None:intergenic |
TCGCAATTTATTATATTTAA+CGG | 0.338276 | 4.3:+45071499 | MS.gene03749:CDS |
CACTGAAGGCTCCACCCATC+TGG | 0.366063 | 4.3:-45071970 | None:intergenic |
ACTCGTGGTCTTAAAATTGC+GGG | 0.408358 | 4.3:+45070870 | MS.gene03749:CDS |
AAAGTGAAGGTTGGGAATCT+TGG | 0.417455 | 4.3:-45070503 | None:intergenic |
GGTGGTCTTCATTGACATCT+TGG | 0.419009 | 4.3:-45072637 | None:intergenic |
ACAGATCCAAGTCAAGTTCC+TGG | 0.422138 | 4.3:-45070798 | None:intergenic |
ATCTGGTTGTCCACATTTGG+AGG | 0.433975 | 4.3:+45071023 | MS.gene03749:CDS |
ATTTCTTCTTTGGACATCAC+AGG | 0.436128 | 4.3:-45070547 | None:intergenic |
GGTAATTGAAAGTGAAGGTT+GGG | 0.443422 | 4.3:-45070511 | None:intergenic |
TAAGTGAAAAGAGGTGTTGA+TGG | 0.446688 | 4.3:-45071076 | None:intergenic |
TATTTGCATTTGTAAGCGTC+TGG | 0.451435 | 4.3:+45071257 | MS.gene03749:CDS |
AATGTCAAAACATTGGTTCT+CGG | 0.452658 | 4.3:+45071318 | MS.gene03749:CDS |
CAAGGTCCAGGAACTTGACT+TGG | 0.457085 | 4.3:+45070792 | MS.gene03749:CDS |
AAATTCAAATGTAATGAGAC+TGG | 0.466724 | 4.3:-45072012 | None:intergenic |
CATGTGTTCTATCCAAAAGA+TGG | 0.467948 | 4.3:+45070467 | MS.gene03749:CDS |
TGTAAGTCACTCAAGTAAGT+TGG | 0.491102 | 4.3:+45072082 | MS.gene03749:CDS |
TGATGAGGAGATTAAGAGGG+TGG | 0.496420 | 4.3:-45072660 | None:intergenic |
GGCATTAGATCTCAAGGTCC+AGG | 0.496808 | 4.3:+45070780 | MS.gene03749:CDS |
TGAAATCAACTCCCAAAGAA+AGG | 0.507406 | 4.3:+45071935 | MS.gene03749:CDS |
TATGAAGAACTTCAAGTGAC+GGG | 0.519558 | 4.3:-45071167 | None:intergenic |
ACTTCGTACCCATACTAGTA+AGG | 0.520038 | 4.3:-45072183 | None:intergenic |
CGGTGCGTCTTTGGAAAGCA+AGG | 0.521282 | 4.3:-45070576 | None:intergenic |
TCTCTTCAATAAGTGAAAAG+AGG | 0.524063 | 4.3:-45071085 | None:intergenic |
TGTACACATGTGGGTTTCAA+AGG | 0.528762 | 4.3:+45070651 | MS.gene03749:CDS |
TGTACACATGTGGGTTTCAA+AGG | 0.528762 | 4.3:+45070759 | MS.gene03749:CDS |
ATCACAGGGTCTGAAATCTC+TGG | 0.529937 | 4.3:-45070532 | None:intergenic |
CCGAAAATATAAGAAAACTA+AGG | 0.538047 | 4.3:+45070704 | MS.gene03749:CDS |
CACTCGTGGTCTTAAAATTG+CGG | 0.539007 | 4.3:+45070869 | MS.gene03749:CDS |
GAAATCCTCCTTACTAGTAT+GGG | 0.541457 | 4.3:+45072175 | MS.gene03749:CDS |
TTCAAAGGCATTAGATCTCA+AGG | 0.542872 | 4.3:+45070774 | MS.gene03749:CDS |
TTTCTTCTTTGGACATCACA+GGG | 0.548590 | 4.3:-45070546 | None:intergenic |
TGGTAATTGAAAGTGAAGGT+TGG | 0.551378 | 4.3:-45070512 | None:intergenic |
CTAAGGCTTCGTAGCGACAA+AGG | 0.553006 | 4.3:+45070721 | MS.gene03749:CDS |
TGTTATGCAGTTTCTCAGCA+TGG | 0.553413 | 4.3:+45071442 | MS.gene03749:intron |
GATGAGGAGATTAAGAGGGT+GGG | 0.559269 | 4.3:-45072659 | None:intergenic |
GGACAACACTTAACAGAAGT+AGG | 0.560485 | 4.3:-45071129 | None:intergenic |
ATGTGTTCTATCCAAAAGAT+GGG | 0.563690 | 4.3:+45070468 | MS.gene03749:CDS |
ATGAGGAGATTAAGAGGGTG+GGG | 0.565218 | 4.3:-45072658 | None:intergenic |
GACGGGGCATTAATTTGTAG+TGG | 0.566180 | 4.3:-45071150 | None:intergenic |
AAGTGAAAAGAGGTGTTGAT+GGG | 0.567500 | 4.3:-45071075 | None:intergenic |
TAGAATACCTCACAGTTTCA+CGG | 0.569419 | 4.3:-45070960 | None:intergenic |
AACTCCCAAAGAAAGGAGGT+TGG | 0.569947 | 4.3:+45071942 | MS.gene03749:CDS |
ACTTTCGAATGTCAAAACAT+TGG | 0.572766 | 4.3:+45071311 | MS.gene03749:CDS |
AATAGCAGCTTCATCAAGAG+TGG | 0.581159 | 4.3:-45071238 | None:intergenic |
ACAGAATGCTCCAAAACTCA+AGG | 0.586809 | 4.3:+45071568 | MS.gene03749:CDS |
TGAAAAGAAGAATTGAGTGT+TGG | 0.588267 | 4.3:-45070904 | None:intergenic |
AGACTGGTTGTAAGACATGC+CGG | 0.589947 | 4.3:-45071996 | None:intergenic |
AAATGTCTGAGAATTGCAGT+TGG | 0.591820 | 4.3:+45071525 | MS.gene03749:CDS |
TCACTCAAGTAAGTTGGAGA+AGG | 0.592918 | 4.3:+45072088 | MS.gene03749:CDS |
GGTGGAGCCTTCAGTGACTC+CGG | 0.594165 | 4.3:+45071977 | MS.gene03749:CDS |
ATATGAAGAACTTCAAGTGA+CGG | 0.594331 | 4.3:-45071168 | None:intergenic |
AAAAGAAGTTCCTCCAAATG+TGG | 0.603065 | 4.3:-45071033 | None:intergenic |
AGGAGATTAAGAGGGTGGGG+TGG | 0.608644 | 4.3:-45072655 | None:intergenic |
AGACATGCCGGAGTCACTGA+AGG | 0.615639 | 4.3:-45071984 | None:intergenic |
AGGAGGTTGGAAACTCCAGA+TGG | 0.616739 | 4.3:+45071955 | MS.gene03749:CDS |
GGTGTTGATGGGTAATGCAA+AGG | 0.626011 | 4.3:-45071064 | None:intergenic |
AATTTGTATACACTCATGAA+AGG | 0.627380 | 4.3:+45071288 | MS.gene03749:CDS |
TTCCACGTGTGAGTCACTCG+TGG | 0.631019 | 4.3:+45070855 | MS.gene03749:CDS |
ACTAATGCAAGAGAGACAGA+TGG | 0.635475 | 4.3:+45070612 | MS.gene03749:CDS |
GGTTGGAAACTCCAGATGGG+TGG | 0.638430 | 4.3:+45071959 | MS.gene03749:CDS |
CTAATGCAAGAGAGACAGAT+GGG | 0.644579 | 4.3:+45070613 | MS.gene03749:CDS |
AAGTAGGCATATATAAACAA+AGG | 0.650404 | 4.3:-45071113 | None:intergenic |
GCCACATGATGTACACATGT+GGG | 0.650684 | 4.3:+45070642 | MS.gene03749:CDS |
GCCACATGATGTACACATGT+GGG | 0.650684 | 4.3:+45070750 | MS.gene03749:CDS |
GGAGGTTGGAAACTCCAGAT+GGG | 0.652028 | 4.3:+45071956 | MS.gene03749:CDS |
ACATGTGTACATCATGTGGC+TGG | 0.656362 | 4.3:-45070639 | None:intergenic |
ACATGTGTACATCATGTGGC+TGG | 0.656362 | 4.3:-45070747 | None:intergenic |
AGATGAAGAATCTTTAGTGA+CGG | 0.657169 | 4.3:-45070937 | None:intergenic |
AGGTATTCTATGTTTGATGA+CGG | 0.657979 | 4.3:+45070973 | MS.gene03749:CDS |
ACCCACATGTGTACATCATG+TGG | 0.672342 | 4.3:-45070643 | None:intergenic |
ACCCACATGTGTACATCATG+TGG | 0.672342 | 4.3:-45070751 | None:intergenic |
AATCAACTCCCAAAGAAAGG+AGG | 0.673141 | 4.3:+45071938 | MS.gene03749:CDS |
TTCATCTCCGTGAAACTGTG+AGG | 0.673351 | 4.3:+45070953 | MS.gene03749:CDS |
CTCGTGGTCTTAAAATTGCG+GGG | 0.673910 | 4.3:+45070871 | MS.gene03749:CDS |
TCGTACCCATACTAGTAAGG+AGG | 0.674938 | 4.3:-45072180 | None:intergenic |
GACCACGAGTGACTCACACG+TGG | 0.682798 | 4.3:-45070857 | None:intergenic |
AGCCACATGATGTACACATG+TGG | 0.685172 | 4.3:+45070641 | MS.gene03749:CDS |
AGCCACATGATGTACACATG+TGG | 0.685172 | 4.3:+45070749 | MS.gene03749:CDS |
TCTCTGGTAATTGAAAGTGA+AGG | 0.696256 | 4.3:-45070516 | None:intergenic |
TCACACGTGGAAAGCCTAAG+CGG | 0.701582 | 4.3:-45070844 | None:intergenic |
TATGCAGTTTCTCAGCATGG+AGG | 0.703511 | 4.3:+45071445 | MS.gene03749:intron |
ATGAAGAACTTCAAGTGACG+GGG | 0.715969 | 4.3:-45071166 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GAATTAATTAAATTGTTTAT+CGG | - | chr4.3:45071738-45071757 | None:intergenic | 10.0% |
!! | TTGAAAAAGAAAAATATTTA+TGG | - | chr4.3:45071367-45071386 | None:intergenic | 10.0% |
!! | TTTAAAAGATGAAATATAAT+AGG | + | chr4.3:45071648-45071667 | MS.gene03749:intron | 10.0% |
!! | ATGTAATTAAAAAATTTGAG+AGG | - | chr4.3:45072499-45072518 | None:intergenic | 15.0% |
!! | TCGCAATTTATTATATTTAA+CGG | + | chr4.3:45071499-45071518 | MS.gene03749:CDS | 15.0% |
!!! | AAAATTCTAACGATATTTTT+TGG | + | chr4.3:45071893-45071912 | MS.gene03749:intron | 15.0% |
!! | AATAAGAACAGAATTGAATA+TGG | - | chr4.3:45071413-45071432 | None:intergenic | 20.0% |
!! | AATTATTCAATATTTGTCAC+AGG | + | chr4.3:45072581-45072600 | MS.gene03749:intron | 20.0% |
!! | ACGTAAAATAGTTTAAAAGA+AGG | - | chr4.3:45071812-45071831 | None:intergenic | 20.0% |
!! | AGTATATAATAAACTCTGTA+TGG | - | chr4.3:45072228-45072247 | None:intergenic | 20.0% |
!! | AGTTTAAAAGAAGGTTAAAT+TGG | - | chr4.3:45071803-45071822 | None:intergenic | 20.0% |
!! | ATAAGAACAGAATTGAATAT+GGG | - | chr4.3:45071412-45071431 | None:intergenic | 20.0% |
!! | CTCATTACATTTGAATTTAA+AGG | + | chr4.3:45072017-45072036 | MS.gene03749:CDS | 20.0% |
!! | GTTTAAAAGAAGGTTAAATT+GGG | - | chr4.3:45071802-45071821 | None:intergenic | 20.0% |
!! | TAATTCAATTGAAGATCATT+TGG | + | chr4.3:45072608-45072627 | MS.gene03749:CDS | 20.0% |
!! | TATGTTTAAATGAAAAGAGT+TGG | + | chr4.3:45072249-45072268 | MS.gene03749:intron | 20.0% |
!!! | CCTTAGTTTTCTTATATTTT+CGG | - | chr4.3:45070707-45070726 | None:intergenic | 20.0% |
! | AAATTCAAATGTAATGAGAC+TGG | - | chr4.3:45072015-45072034 | None:intergenic | 25.0% |
! | AAGTAGGCATATATAAACAA+AGG | - | chr4.3:45071116-45071135 | None:intergenic | 25.0% |
! | AATTTGTATACACTCATGAA+AGG | + | chr4.3:45071288-45071307 | MS.gene03749:CDS | 25.0% |
! | CCGAAAATATAAGAAAACTA+AGG | + | chr4.3:45070704-45070723 | MS.gene03749:CDS | 25.0% |
! | CTATTTACTATATATCCAGT+TGG | + | chr4.3:45071870-45071889 | MS.gene03749:intron | 25.0% |
! | GTTGGTATCTTAATATTTGT+TGG | + | chr4.3:45072267-45072286 | MS.gene03749:intron | 25.0% |
! | TCAAAACATAAAAACTGAGT+TGG | + | chr4.3:45072043-45072062 | MS.gene03749:CDS | 25.0% |
!! | GATCTCAATAATTTTCTATC+TGG | + | chr4.3:45071006-45071025 | MS.gene03749:CDS | 25.0% |
!! | TATAACACTCTTTTGTTGAT+AGG | - | chr4.3:45070444-45070463 | None:intergenic | 25.0% |
!! | TTTGTGAAGTCATATTTTCT+AGG | - | chr4.3:45071213-45071232 | None:intergenic | 25.0% |
!!! | AAGGTTTTTGATTTCTTCTT+TGG | - | chr4.3:45070560-45070579 | None:intergenic | 25.0% |
ACTTTCGAATGTCAAAACAT+TGG | + | chr4.3:45071311-45071330 | MS.gene03749:CDS | 30.0% | |
AGATGAAGAATCTTTAGTGA+CGG | - | chr4.3:45070940-45070959 | None:intergenic | 30.0% | |
AGGTATTCTATGTTTGATGA+CGG | + | chr4.3:45070973-45070992 | MS.gene03749:CDS | 30.0% | |
AGTAGAAAAAAGTTTACGCA+TGG | + | chr4.3:45072145-45072164 | MS.gene03749:CDS | 30.0% | |
ATATGAAGAACTTCAAGTGA+CGG | - | chr4.3:45071171-45071190 | None:intergenic | 30.0% | |
ATGTGTTCTATCCAAAAGAT+GGG | + | chr4.3:45070468-45070487 | MS.gene03749:CDS | 30.0% | |
GTAGAAAAAAGTTTACGCAT+GGG | + | chr4.3:45072146-45072165 | MS.gene03749:CDS | 30.0% | |
TAAAAGAAGGTTAAATTGGG+AGG | - | chr4.3:45071799-45071818 | None:intergenic | 30.0% | |
TAGAAAAAAGTTTACGCATG+GGG | + | chr4.3:45072147-45072166 | MS.gene03749:CDS | 30.0% | |
TCTCTTCAATAAGTGAAAAG+AGG | - | chr4.3:45071088-45071107 | None:intergenic | 30.0% | |
TGAAAAGAAGAATTGAGTGT+TGG | - | chr4.3:45070907-45070926 | None:intergenic | 30.0% | |
TGAATATGGGAGAGTAAATA+TGG | - | chr4.3:45071399-45071418 | None:intergenic | 30.0% | |
! | AAAAAATCTTATTGCCGCTT+AGG | + | chr4.3:45070830-45070849 | MS.gene03749:CDS | 30.0% |
! | ATTTGTTGGTATGATGTTGT+GGG | + | chr4.3:45072281-45072300 | MS.gene03749:intron | 30.0% |
! | CATTAGTTTGGCTATATTCT+CGG | - | chr4.3:45070599-45070618 | None:intergenic | 30.0% |
! | TATCGTTAGAATTTTCCAAC+TGG | - | chr4.3:45071888-45071907 | None:intergenic | 30.0% |
! | TATTTGTTGGTATGATGTTG+TGG | + | chr4.3:45072280-45072299 | MS.gene03749:intron | 30.0% |
!! | AATGTCAAAACATTGGTTCT+CGG | + | chr4.3:45071318-45071337 | MS.gene03749:CDS | 30.0% |
AAAAGAAGTTCCTCCAAATG+TGG | - | chr4.3:45071036-45071055 | None:intergenic | 35.0% | |
AAATGTCTGAGAATTGCAGT+TGG | + | chr4.3:45071525-45071544 | MS.gene03749:CDS | 35.0% | |
ACTCAAGGATCTTGCAATTA+TGG | + | chr4.3:45071583-45071602 | MS.gene03749:CDS | 35.0% | |
AGAAATCCTCCTTACTAGTA+TGG | + | chr4.3:45072174-45072193 | MS.gene03749:CDS | 35.0% | |
ATATAATAGGCTCGAAAGTC+TGG | + | chr4.3:45071661-45071680 | MS.gene03749:intron | 35.0% | |
ATTTCTTCTTTGGACATCAC+AGG | - | chr4.3:45070550-45070569 | None:intergenic | 35.0% | |
CATGTGTTCTATCCAAAAGA+TGG | + | chr4.3:45070467-45070486 | MS.gene03749:CDS | 35.0% | |
GAAAGATAAAGCTGTGTTGT+TGG | - | chr4.3:45072357-45072376 | None:intergenic | 35.0% | |
GAAATCCTCCTTACTAGTAT+GGG | + | chr4.3:45072175-45072194 | MS.gene03749:CDS | 35.0% | |
GGTAATTGAAAGTGAAGGTT+GGG | - | chr4.3:45070514-45070533 | None:intergenic | 35.0% | |
TAGAATACCTCACAGTTTCA+CGG | - | chr4.3:45070963-45070982 | None:intergenic | 35.0% | |
TATGAAGAACTTCAAGTGAC+GGG | - | chr4.3:45071170-45071189 | None:intergenic | 35.0% | |
TATTTGCATTTGTAAGCGTC+TGG | + | chr4.3:45071257-45071276 | MS.gene03749:CDS | 35.0% | |
TCTCTGGTAATTGAAAGTGA+AGG | - | chr4.3:45070519-45070538 | None:intergenic | 35.0% | |
TGAAATCAACTCCCAAAGAA+AGG | + | chr4.3:45071935-45071954 | MS.gene03749:CDS | 35.0% | |
TGGTAATTGAAAGTGAAGGT+TGG | - | chr4.3:45070515-45070534 | None:intergenic | 35.0% | |
TGTAAGTCACTCAAGTAAGT+TGG | + | chr4.3:45072082-45072101 | MS.gene03749:CDS | 35.0% | |
TTTCTTCTTTGGACATCACA+GGG | - | chr4.3:45070549-45070568 | None:intergenic | 35.0% | |
TTTGTTGGTATGATGTTGTG+GGG | + | chr4.3:45072282-45072301 | MS.gene03749:intron | 35.0% | |
! | ACTCTTCTTTTCTTTGCAGT+AGG | - | chr4.3:45072128-45072147 | None:intergenic | 35.0% |
! | ATTGCAAGATCCTTGAGTTT+TGG | - | chr4.3:45071581-45071600 | None:intergenic | 35.0% |
! | TATGTCTAGAACAGTAAGAG+AGG | - | chr4.3:45072326-45072345 | None:intergenic | 35.0% |
!! | AAGTGAAAAGAGGTGTTGAT+GGG | - | chr4.3:45071078-45071097 | None:intergenic | 35.0% |
!! | TAAGTGAAAAGAGGTGTTGA+TGG | - | chr4.3:45071079-45071098 | None:intergenic | 35.0% |
!! | TTATATTTTCGGTGCGTCTT+AGG | - | chr4.3:45070696-45070715 | None:intergenic | 35.0% |
!! | TTCAAAGGCATTAGATCTCA+AGG | + | chr4.3:45070774-45070793 | MS.gene03749:CDS | 35.0% |
!!! | GCGGCAATAAGATTTTTTCA+TGG | - | chr4.3:45070828-45070847 | None:intergenic | 35.0% |
AAAGTGAAGGTTGGGAATCT+TGG | - | chr4.3:45070506-45070525 | None:intergenic | 40.0% | |
AATAGCAGCTTCATCAAGAG+TGG | - | chr4.3:45071241-45071260 | None:intergenic | 40.0% | |
AATCAACTCCCAAAGAAAGG+AGG | + | chr4.3:45071938-45071957 | MS.gene03749:CDS | 40.0% | |
ACAGAATGCTCCAAAACTCA+AGG | + | chr4.3:45071568-45071587 | MS.gene03749:CDS | 40.0% | |
ACTAATGCAAGAGAGACAGA+TGG | + | chr4.3:45070612-45070631 | MS.gene03749:CDS | 40.0% | |
ACTTCGTACCCATACTAGTA+AGG | - | chr4.3:45072186-45072205 | None:intergenic | 40.0% | |
AGTTTCCAACCTCCTTTCTT+TGG | - | chr4.3:45071950-45071969 | None:intergenic | 40.0% | |
ATGAAGAACTTCAAGTGACG+GGG | - | chr4.3:45071169-45071188 | None:intergenic | 40.0% | |
CACACACACAATTACATTCG+TGG | + | chr4.3:45072403-45072422 | MS.gene03749:intron | 40.0% | |
CTAATGCAAGAGAGACAGAT+GGG | + | chr4.3:45070613-45070632 | MS.gene03749:CDS | 40.0% | |
CTGTCTCTCTTGCATTAGTT+TGG | - | chr4.3:45070611-45070630 | None:intergenic | 40.0% | |
GGACAACACTTAACAGAAGT+AGG | - | chr4.3:45071132-45071151 | None:intergenic | 40.0% | |
GTTTCCAACCTCCTTTCTTT+GGG | - | chr4.3:45071949-45071968 | None:intergenic | 40.0% | |
TCTATCTGGTTGTCCACATT+TGG | + | chr4.3:45071020-45071039 | MS.gene03749:CDS | 40.0% | |
TGTACACATGTGGGTTTCAA+AGG | + | chr4.3:45070651-45070670 | MS.gene03749:CDS | 40.0% | |
TGTTATGCAGTTTCTCAGCA+TGG | + | chr4.3:45071442-45071461 | MS.gene03749:intron | 40.0% | |
! | ACTCGTGGTCTTAAAATTGC+GGG | + | chr4.3:45070870-45070889 | MS.gene03749:CDS | 40.0% |
! | CACTCGTGGTCTTAAAATTG+CGG | + | chr4.3:45070869-45070888 | MS.gene03749:CDS | 40.0% |
! | GATAAAGCTGTGTTGTTGGT+CGG | - | chr4.3:45072353-45072372 | None:intergenic | 40.0% |
! | TCACTCAAGTAAGTTGGAGA+AGG | + | chr4.3:45072088-45072107 | MS.gene03749:CDS | 40.0% |
AACTCCCAAAGAAAGGAGGT+TGG | + | chr4.3:45071942-45071961 | MS.gene03749:CDS | 45.0% | |
ACAGATCCAAGTCAAGTTCC+TGG | - | chr4.3:45070801-45070820 | None:intergenic | 45.0% | |
ACATGTGTACATCATGTGGC+TGG | - | chr4.3:45070642-45070661 | None:intergenic | 45.0% | |
ACCCACATGTGTACATCATG+TGG | - | chr4.3:45070646-45070665 | None:intergenic | 45.0% | |
AGCCACATGATGTACACATG+TGG | + | chr4.3:45070641-45070660 | MS.gene03749:CDS | 45.0% | |
ATCTGGTTGTCCACATTTGG+AGG | + | chr4.3:45071023-45071042 | MS.gene03749:CDS | 45.0% | |
GCACAAGAAGAGCAAAGACT+TGG | + | chr4.3:45071683-45071702 | MS.gene03749:intron | 45.0% | |
GCCACATGATGTACACATGT+GGG | + | chr4.3:45070642-45070661 | MS.gene03749:CDS | 45.0% | |
GGTGGTCTTCATTGACATCT+TGG | - | chr4.3:45072640-45072659 | None:intergenic | 45.0% | |
TATGCAGTTTCTCAGCATGG+AGG | + | chr4.3:45071445-45071464 | MS.gene03749:intron | 45.0% | |
TCGTACCCATACTAGTAAGG+AGG | - | chr4.3:45072183-45072202 | None:intergenic | 45.0% | |
TTCATCTCCGTGAAACTGTG+AGG | + | chr4.3:45070953-45070972 | MS.gene03749:CDS | 45.0% | |
! | AGACTGGTTGTAAGACATGC+CGG | - | chr4.3:45071999-45072018 | None:intergenic | 45.0% |
! | ATCACAGGGTCTGAAATCTC+TGG | - | chr4.3:45070535-45070554 | None:intergenic | 45.0% |
! | CTATATTCTCGGTGCGTCTT+TGG | - | chr4.3:45070588-45070607 | None:intergenic | 45.0% |
! | CTCGTGGTCTTAAAATTGCG+GGG | + | chr4.3:45070871-45070890 | MS.gene03749:CDS | 45.0% |
!! | GACGGGGCATTAATTTGTAG+TGG | - | chr4.3:45071153-45071172 | None:intergenic | 45.0% |
!! | GGTGTTGATGGGTAATGCAA+AGG | - | chr4.3:45071067-45071086 | None:intergenic | 45.0% |
AGGAGGTTGGAAACTCCAGA+TGG | + | chr4.3:45071955-45071974 | MS.gene03749:CDS | 50.0% | |
CAAGGTCCAGGAACTTGACT+TGG | + | chr4.3:45070792-45070811 | MS.gene03749:CDS | 50.0% | |
CTAAGGCTTCGTAGCGACAA+AGG | + | chr4.3:45070721-45070740 | MS.gene03749:CDS | 50.0% | |
GGAGGTTGGAAACTCCAGAT+GGG | + | chr4.3:45071956-45071975 | MS.gene03749:CDS | 50.0% | |
GGCATTAGATCTCAAGGTCC+AGG | + | chr4.3:45070780-45070799 | MS.gene03749:CDS | 50.0% | |
GTTGGTATGATGTTGTGGGG+TGG | + | chr4.3:45072285-45072304 | MS.gene03749:intron | 50.0% | |
TCACACGTGGAAAGCCTAAG+CGG | - | chr4.3:45070847-45070866 | None:intergenic | 50.0% | |
!! | GCAGATCGACTCCCATCTTT+TGG | - | chr4.3:45070482-45070501 | None:intergenic | 50.0% |
AGACATGCCGGAGTCACTGA+AGG | - | chr4.3:45071987-45072006 | None:intergenic | 55.0% | |
GGTTGGAAACTCCAGATGGG+TGG | + | chr4.3:45071959-45071978 | MS.gene03749:CDS | 55.0% | |
TTCCACGTGTGAGTCACTCG+TGG | + | chr4.3:45070855-45070874 | MS.gene03749:CDS | 55.0% | |
! | CGGTGCGTCTTTGGAAAGCA+AGG | - | chr4.3:45070579-45070598 | None:intergenic | 55.0% |
CACTGAAGGCTCCACCCATC+TGG | - | chr4.3:45071973-45071992 | None:intergenic | 60.0% | |
GACCACGAGTGACTCACACG+TGG | - | chr4.3:45070860-45070879 | None:intergenic | 60.0% | |
GGTGGAGCCTTCAGTGACTC+CGG | + | chr4.3:45071977-45071996 | MS.gene03749:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 45070367 | 45072671 | 45070367 | ID=MS.gene03749 |
chr4.3 | mRNA | 45070367 | 45072671 | 45070367 | ID=MS.gene03749.t1;Parent=MS.gene03749 |
chr4.3 | exon | 45070367 | 45071356 | 45070367 | ID=MS.gene03749.t1.exon1;Parent=MS.gene03749.t1 |
chr4.3 | CDS | 45070367 | 45071356 | 45070367 | ID=cds.MS.gene03749.t1;Parent=MS.gene03749.t1 |
chr4.3 | exon | 45071452 | 45071604 | 45071452 | ID=MS.gene03749.t1.exon2;Parent=MS.gene03749.t1 |
chr4.3 | CDS | 45071452 | 45071604 | 45071452 | ID=cds.MS.gene03749.t1;Parent=MS.gene03749.t1 |
chr4.3 | exon | 45071927 | 45072196 | 45071927 | ID=MS.gene03749.t1.exon3;Parent=MS.gene03749.t1 |
chr4.3 | CDS | 45071927 | 45072196 | 45071927 | ID=cds.MS.gene03749.t1;Parent=MS.gene03749.t1 |
chr4.3 | exon | 45072603 | 45072671 | 45072603 | ID=MS.gene03749.t1.exon4;Parent=MS.gene03749.t1 |
chr4.3 | CDS | 45072603 | 45072671 | 45072603 | ID=cds.MS.gene03749.t1;Parent=MS.gene03749.t1 |
Gene Sequence |
Protein sequence |