AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene072547


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072547.t1 MTR_4g056040 69.397 464 104 4 165 590 5 468 0.0 599
MS.gene072547.t1 MTR_4g056020 69.725 436 124 2 161 588 1 436 0.0 588
MS.gene072547.t1 MTR_4g056030 69.676 432 123 3 165 588 5 436 0.0 577
MS.gene072547.t1 MTR_4g055990 65.063 478 117 4 161 588 1 478 0.0 565
MS.gene072547.t1 MTR_4g055990 65.000 480 118 4 161 590 1 480 0.0 565
MS.gene072547.t1 MTR_1g038710 68.860 456 119 7 150 588 1 450 0.0 565
MS.gene072547.t1 MTR_4g055580 61.133 512 145 5 130 588 53 563 0.0 557
MS.gene072547.t1 MTR_4g056070 65.826 436 102 2 161 549 1 436 0.0 540
MS.gene072547.t1 MTR_1g090883 62.707 362 119 6 150 500 1 357 4.04e-138 406
MS.gene072547.t1 MTR_7g110920 57.983 357 91 5 252 587 1 319 1.48e-119 357
MS.gene072547.t1 MTR_4g093690 59.851 269 96 6 160 419 9 274 1.55e-87 273
MS.gene072547.t1 MTR_1g090900 67.052 173 49 2 165 329 7 179 1.83e-64 210
MS.gene072547.t1 MTR_4g056020 69.065 139 42 1 451 588 2 140 9.46e-60 196
MS.gene072547.t1 MTR_4g056010 77.551 98 22 0 223 320 3 100 8.87e-42 146
MS.gene072547.t1 MTR_1g090890 66.667 87 27 1 504 590 33 117 3.48e-30 115
MS.gene072547.t1 MTR_5g084070 30.569 422 245 14 165 569 9 399 8.54e-29 119
MS.gene072547.t1 MTR_8g445780 31.250 400 233 15 169 549 13 389 3.42e-28 117
MS.gene072547.t1 MTR_5g080710 29.663 445 259 16 146 565 6 421 6.07e-27 114
MS.gene072547.t1 MTR_3g107100 28.878 419 216 14 165 567 7 359 1.17e-25 110
MS.gene072547.t1 MTR_3g108560 30.193 414 206 20 163 564 14 356 1.77e-24 106
MS.gene072547.t1 MTR_7g056433 27.644 416 218 16 165 564 8 356 4.13e-22 99.0
MS.gene072547.t1 MTR_2g007500 29.563 389 191 16 169 541 14 335 1.55e-21 96.7
MS.gene072547.t1 MTR_2g007450 24.839 467 260 17 155 585 2 413 2.24e-21 97.4
MS.gene072547.t1 MTR_1g053025 26.164 451 239 15 169 590 2 387 5.13e-21 95.9
MS.gene072547.t1 MTR_4g032730 27.669 459 246 18 162 564 8 436 3.01e-20 94.4
MS.gene072547.t1 MTR_7g115270 27.381 420 219 16 169 564 12 369 6.71e-20 92.4
MS.gene072547.t1 MTR_3g048290 27.610 431 264 14 165 564 19 432 8.62e-20 93.2
MS.gene072547.t1 MTR_8g062270 29.561 433 244 20 169 564 16 424 7.36e-19 90.1
MS.gene072547.t1 MTR_2g007400 24.891 458 238 19 169 589 12 400 2.32e-18 88.2
MS.gene072547.t1 MTR_8g014260 27.483 433 257 16 166 566 13 420 1.25e-17 86.3
MS.gene072547.t1 MTR_7g033915 25.416 421 219 13 169 578 11 347 1.78e-17 84.7
MS.gene072547.t1 MTR_3g107120 27.400 427 214 15 166 564 6 364 3.48e-17 84.3
MS.gene072547.t1 MTR_3g082890 25.195 512 295 18 81 564 3 454 1.09e-16 83.6
MS.gene072547.t1 MTR_4g039440 27.924 419 217 18 163 564 26 376 1.12e-16 82.8
MS.gene072547.t1 MTR_8g058970 26.682 446 263 16 165 564 15 442 1.43e-16 83.2
MS.gene072547.t1 MTR_8g468840 27.546 432 254 17 168 564 13 420 1.82e-16 82.4
MS.gene072547.t1 MTR_0492s0020 35.204 196 98 8 169 352 86 264 1.97e-16 82.4
MS.gene072547.t1 MTR_0543s0010 35.204 196 98 8 169 352 86 264 2.62e-16 82.0
MS.gene072547.t1 MTR_5g039950 27.711 415 231 16 169 564 23 387 3.79e-16 81.3
MS.gene072547.t1 MTR_2g083840 28.605 430 245 17 169 564 21 422 4.35e-16 81.3
MS.gene072547.t1 MTR_4g050930 27.523 327 208 9 167 475 27 342 5.39e-16 80.5
MS.gene072547.t1 MTR_5g045170 32.673 202 88 8 171 346 16 195 6.98e-16 80.5
MS.gene072547.t1 MTR_3g108560 35.714 196 107 10 163 351 14 197 1.14e-15 78.6
MS.gene072547.t1 MTR_4g050930 27.523 327 208 9 167 475 27 342 1.45e-15 80.1
MS.gene072547.t1 MTR_8g467800 29.327 416 248 16 165 553 16 412 1.56e-15 79.7
MS.gene072547.t1 MTR_8g058965 27.655 452 263 17 150 565 1 424 3.22e-15 79.0
MS.gene072547.t1 MTR_1g085120 25.116 430 229 16 169 576 167 525 4.47e-15 78.6
MS.gene072547.t1 MTR_1g041245 33.511 188 108 5 169 346 11 191 4.67e-15 77.8
MS.gene072547.t1 MTR_1g085120 25.116 430 229 16 169 576 92 450 5.50e-15 78.2
MS.gene072547.t1 MTR_8g014160 27.126 435 211 15 162 564 33 393 9.13e-15 77.0
MS.gene072547.t1 MTR_2g036470 26.168 428 226 18 169 574 14 373 1.18e-14 76.6
MS.gene072547.t1 MTR_2g008320 25.000 440 246 15 169 590 52 425 1.42e-14 76.6
MS.gene072547.t1 MTR_4g080787 26.757 441 250 19 169 564 19 431 1.65e-14 76.6
MS.gene072547.t1 MTR_5g058100 25.814 430 218 15 155 564 2 350 3.30e-14 75.1
MS.gene072547.t1 MTR_8g468810 27.739 429 252 19 169 564 25 428 3.49e-14 75.5
MS.gene072547.t1 MTR_5g045510 33.508 191 103 9 169 346 12 191 3.64e-14 74.7
MS.gene072547.t1 MTR_7g007080 32.569 218 106 10 167 359 2 203 5.61e-14 74.3
MS.gene072547.t1 MTR_7g026500 25.412 425 216 16 168 564 13 364 6.12e-14 74.3
MS.gene072547.t1 MTR_6g022360 35.106 188 105 6 169 352 43 217 7.06e-14 74.3
MS.gene072547.t1 MTR_4g045900 25.745 470 274 15 169 571 26 487 7.15e-14 74.7
MS.gene072547.t1 MTR_6g011460 26.777 422 201 16 169 564 46 385 8.99e-14 73.9
MS.gene072547.t1 MTR_4g092430 25.974 385 250 12 148 510 22 393 9.00e-14 74.3
MS.gene072547.t1 MTR_4g080590 26.667 420 263 18 169 565 23 420 9.67e-14 73.9
MS.gene072547.t1 MTR_7g098570 34.759 187 106 5 169 346 20 199 1.23e-13 73.9
MS.gene072547.t1 MTR_3g107160 25.721 416 228 12 165 564 6 356 1.61e-13 73.2
MS.gene072547.t1 MTR_3g023270 28.571 329 195 13 165 473 8 316 1.63e-13 72.8
MS.gene072547.t1 MTR_7g023310 23.364 428 276 15 166 564 23 427 2.55e-13 72.8
MS.gene072547.t1 MTR_2g007360 25.612 449 217 20 169 589 12 371 3.02e-13 72.0
MS.gene072547.t1 MTR_5g073340 23.118 372 206 10 169 536 8 303 5.06e-13 70.5
MS.gene072547.t1 MTR_7g056447 33.333 189 109 5 169 348 9 189 5.67e-13 70.1
MS.gene072547.t1 MTR_7g110910 66.038 53 17 1 150 202 148 199 6.89e-13 68.2
MS.gene072547.t1 MTR_8g062310 31.884 207 121 8 169 366 25 220 9.01e-13 70.9
MS.gene072547.t1 MTR_7g032380 29.167 216 128 5 169 370 11 215 9.82e-13 70.5
MS.gene072547.t1 MTR_7g055943 26.230 427 206 20 169 564 40 388 1.40e-12 70.5
MS.gene072547.t1 MTR_7g098510 34.759 187 106 6 169 346 18 197 1.68e-12 69.7
MS.gene072547.t1 MTR_3g082890 26.450 431 252 17 166 564 14 411 1.99e-12 70.1
MS.gene072547.t1 MTR_4g080590 29.096 354 212 16 169 499 23 360 2.07e-12 69.3
MS.gene072547.t1 MTR_4g080773 26.879 439 255 16 169 564 19 434 2.31e-12 70.1
MS.gene072547.t1 MTR_8g469020 26.959 434 259 16 169 565 7 419 2.41e-12 69.7
MS.gene072547.t1 MTR_4g080773 26.424 439 257 15 169 564 19 434 2.69e-12 69.7
MS.gene072547.t1 MTR_1g085120 31.658 199 110 8 169 352 179 366 2.72e-12 69.7
MS.gene072547.t1 MTR_1g108820 25.000 412 226 16 169 564 8 352 2.78e-12 69.3
MS.gene072547.t1 MTR_7g034115 33.673 196 97 9 169 346 11 191 2.98e-12 68.9
MS.gene072547.t1 MTR_3g099900 27.660 329 205 12 166 474 15 330 4.38e-12 68.6
MS.gene072547.t1 MTR_1g048340 26.444 329 203 10 162 481 9 307 4.68e-12 67.8
MS.gene072547.t1 MTR_6g088700 27.493 371 229 14 165 510 10 365 6.98e-12 68.2
MS.gene072547.t1 MTR_3g036250 33.333 192 111 6 166 346 2 187 7.19e-12 67.8
MS.gene072547.t1 MTR_4g045680 28.302 318 196 14 162 459 10 315 8.22e-12 67.8
MS.gene072547.t1 MTR_8g085430 31.841 201 111 8 169 351 11 203 9.06e-12 67.0
MS.gene072547.t1 MTR_3g108150 33.155 187 105 7 169 346 13 188 9.92e-12 67.4
MS.gene072547.t1 MTR_3g087260 26.622 447 253 15 169 569 12 429 1.51e-11 67.4
MS.gene072547.t1 MTR_3g463830 29.885 174 110 3 155 316 49 222 1.54e-11 66.6
MS.gene072547.t1 MTR_8g066650 26.048 334 212 14 163 475 74 393 2.30e-11 66.6
MS.gene072547.t1 MTR_7g033945 35.119 168 82 7 169 316 11 171 2.32e-11 63.2
MS.gene072547.t1 MTR_5g008950 34.579 107 63 3 464 566 233 336 4.13e-11 65.5
MS.gene072547.t1 MTR_8g467800 30.968 310 175 12 165 450 16 310 5.41e-11 64.7
MS.gene072547.t1 MTR_4g024780 28.962 183 106 7 165 330 142 317 5.94e-11 65.5
MS.gene072547.t1 MTR_4g051480 25.519 337 215 11 165 475 21 347 9.21e-11 65.5
MS.gene072547.t1 MTR_4g047950 34.132 167 91 6 165 316 9 171 9.35e-11 64.3
MS.gene072547.t1 MTR_1g108820 31.818 198 112 7 169 355 8 193 9.43e-11 64.3
MS.gene072547.t1 MTR_7g017280 23.810 357 199 13 166 473 145 477 9.75e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072547.t1 AT4G00315 30.734 436 243 19 169 569 2 413 2.36e-30 124
MS.gene072547.t1 AT4G26340 28.738 428 252 18 169 575 2 397 3.84e-28 117
MS.gene072547.t1 AT1G55660 29.817 436 247 19 169 569 53 464 4.03e-28 118
MS.gene072547.t1 AT3G59230 29.536 474 248 20 169 583 12 458 6.73e-27 114
MS.gene072547.t1 AT4G14103 29.921 381 203 12 169 509 8 364 7.24e-27 113
MS.gene072547.t1 AT4G14103 29.921 381 203 12 169 509 8 364 7.24e-27 113
MS.gene072547.t1 AT4G14103 29.759 373 198 12 168 500 7 355 1.52e-25 110
MS.gene072547.t1 AT4G13960 27.640 445 252 13 169 569 2 420 1.82e-24 107
MS.gene072547.t1 AT4G13960 27.640 445 252 13 169 569 2 420 1.82e-24 107
MS.gene072547.t1 AT5G62970 29.091 440 243 20 169 564 2 416 6.29e-24 105
MS.gene072547.t1 AT3G59190 27.467 375 213 10 169 500 12 370 1.22e-23 105
MS.gene072547.t1 AT3G59190 27.128 376 213 10 169 500 12 370 1.45e-23 103
MS.gene072547.t1 AT4G10400 26.555 418 244 13 169 564 2 378 2.33e-23 103
MS.gene072547.t1 AT4G10400 26.555 418 244 13 169 564 2 378 2.33e-23 103
MS.gene072547.t1 AT4G10400 26.555 418 244 13 169 564 2 378 2.33e-23 103
MS.gene072547.t1 AT2G26860 29.904 418 248 16 169 564 2 396 3.58e-23 102
MS.gene072547.t1 AT2G26860 29.904 418 248 16 169 564 2 396 3.58e-23 102
MS.gene072547.t1 AT3G62430 31.933 357 202 15 169 500 2 342 3.84e-23 102
MS.gene072547.t1 AT1G58310 27.708 480 249 19 164 573 3 454 3.97e-23 103
MS.gene072547.t1 AT5G56400 27.803 446 264 17 144 564 8 420 1.22e-22 101
MS.gene072547.t1 AT3G59250 28.401 419 227 17 169 565 7 374 1.43e-22 100
MS.gene072547.t1 AT1G06630 31.302 361 201 13 168 500 11 352 1.65e-22 100
MS.gene072547.t1 AT1G06630 31.302 361 201 13 168 500 11 352 1.65e-22 100
MS.gene072547.t1 AT1G06630 31.302 361 201 13 168 500 11 352 1.65e-22 100
MS.gene072547.t1 AT1G06630 31.302 361 201 13 168 500 11 352 1.65e-22 100
MS.gene072547.t1 AT1G06630 31.302 361 201 13 168 500 11 352 1.65e-22 99.8
MS.gene072547.t1 AT1G06630 31.302 361 201 13 168 500 11 352 1.65e-22 99.8
MS.gene072547.t1 AT1G06630 31.302 361 201 13 168 500 20 361 1.67e-22 100
MS.gene072547.t1 AT1G06630 31.302 361 201 13 168 500 11 352 1.78e-22 101
MS.gene072547.t1 AT4G14096 27.968 379 208 11 168 509 7 357 2.09e-22 100
MS.gene072547.t1 AT4G14096 27.968 379 208 11 168 509 7 357 2.09e-22 100
MS.gene072547.t1 AT2G42720 31.452 372 189 16 169 500 2 347 2.17e-22 100
MS.gene072547.t1 AT5G56440 28.506 435 253 17 169 572 2 409 2.54e-22 100
MS.gene072547.t1 AT5G38590 26.340 429 267 13 169 579 2 399 5.09e-22 99.4
MS.gene072547.t1 AT1G51370 28.302 424 242 14 167 564 17 404 9.38e-22 98.6
MS.gene072547.t1 AT1G16930 29.208 404 231 16 156 531 2 378 1.28e-21 98.6
MS.gene072547.t1 AT1G16930 29.208 404 231 16 156 531 2 378 1.28e-21 98.6
MS.gene072547.t1 AT1G16930 29.208 404 231 16 156 531 2 378 1.28e-21 98.6
MS.gene072547.t1 AT3G59160 27.494 411 214 15 169 513 13 405 1.42e-21 98.6
MS.gene072547.t1 AT4G26350 25.701 428 274 15 169 575 2 406 1.43e-21 98.2
MS.gene072547.t1 AT5G56380 26.651 424 247 13 169 556 2 397 2.27e-21 97.4
MS.gene072547.t1 AT5G56380 26.651 424 247 13 169 556 2 397 2.27e-21 97.4
MS.gene072547.t1 AT5G60610 30.024 413 236 20 169 560 2 382 3.15e-21 96.7
MS.gene072547.t1 AT5G60610 30.024 413 236 20 169 560 2 382 3.15e-21 96.7
MS.gene072547.t1 AT5G38396 29.737 380 196 14 169 500 2 358 4.92e-21 96.7
MS.gene072547.t1 AT2G26030 26.577 444 254 18 169 569 4 418 6.51e-21 96.3
MS.gene072547.t1 AT2G26030 26.351 444 250 18 169 569 4 413 8.45e-21 95.9
MS.gene072547.t1 AT2G26030 26.351 444 250 18 169 569 4 413 8.45e-21 95.9
MS.gene072547.t1 AT3G59000 27.171 449 252 14 169 566 2 426 8.87e-21 96.3
MS.gene072547.t1 AT1G52650 25.566 442 256 15 169 564 2 416 1.23e-20 95.5
MS.gene072547.t1 AT3G50710 26.437 435 230 14 169 560 2 389 1.65e-20 94.7
MS.gene072547.t1 AT1G55660 34.008 247 132 12 169 396 53 287 2.32e-20 93.6
MS.gene072547.t1 AT1G69630 27.826 460 271 19 154 579 2 434 5.84e-20 93.6
MS.gene072547.t1 AT1G66300 27.974 454 261 19 167 585 27 449 6.98e-20 93.2
MS.gene072547.t1 AT3G62440 28.861 395 211 17 169 514 2 375 9.81e-20 92.8
MS.gene072547.t1 AT4G22280 31.405 363 215 12 169 515 2 346 1.00e-19 92.4
MS.gene072547.t1 AT3G59200 27.143 420 220 16 168 532 6 394 1.14e-19 93.2
MS.gene072547.t1 AT3G59210 29.058 382 218 12 165 509 3 368 1.16e-19 92.8
MS.gene072547.t1 AT3G59210 29.058 382 218 12 165 509 3 368 1.16e-19 92.8
MS.gene072547.t1 AT3G59210 29.058 382 218 12 165 509 3 368 1.16e-19 92.8
MS.gene072547.t1 AT3G59210 29.058 382 218 12 165 509 3 368 1.16e-19 92.8
MS.gene072547.t1 AT3G59210 29.058 382 218 12 165 509 3 368 1.16e-19 92.8
MS.gene072547.t1 AT1G13780 27.045 440 246 16 169 562 10 420 1.31e-19 92.4
MS.gene072547.t1 AT2G29930 29.189 370 201 14 169 505 12 353 1.40e-19 92.4
MS.gene072547.t1 AT2G29930 29.189 370 201 14 169 505 12 353 1.40e-19 92.4
MS.gene072547.t1 AT1G51370 28.049 410 234 13 153 537 3 376 1.78e-19 91.7
MS.gene072547.t1 AT5G53840 29.286 420 256 14 162 564 11 406 3.04e-19 91.3
MS.gene072547.t1 AT5G38390 26.966 445 252 18 169 570 2 416 3.23e-19 91.3
MS.gene072547.t1 AT3G58880 28.723 376 204 13 169 503 3 355 6.92e-19 90.1
MS.gene072547.t1 AT1G32375 27.751 418 251 18 169 564 2 390 9.20e-19 89.4
MS.gene072547.t1 AT1G32375 27.751 418 251 18 169 564 2 390 9.20e-19 89.4
MS.gene072547.t1 AT1G05080 28.947 418 255 13 168 564 12 408 9.25e-19 89.7
MS.gene072547.t1 AT5G22670 27.962 422 252 17 168 561 10 407 9.94e-19 89.7
MS.gene072547.t1 AT3G52680 28.404 426 242 17 168 566 20 409 1.03e-18 89.7
MS.gene072547.t1 AT3G03030 27.056 377 215 11 169 500 2 363 1.10e-18 89.7
MS.gene072547.t1 AT5G44490 28.348 448 256 19 154 564 2 421 1.52e-18 89.4
MS.gene072547.t1 AT5G44490 28.348 448 256 19 154 564 2 421 1.89e-18 89.0
MS.gene072547.t1 AT5G44950 27.407 405 229 15 168 537 3 377 3.13e-18 87.8
MS.gene072547.t1 AT3G58960 28.954 373 218 13 169 508 2 360 3.27e-18 88.2
MS.gene072547.t1 AT4G00160 29.078 423 243 17 169 566 16 406 4.11e-18 87.8
MS.gene072547.t1 AT4G22280 32.184 348 202 12 169 500 2 331 4.54e-18 86.3
MS.gene072547.t1 AT4G13985 27.214 463 282 16 152 578 2 445 4.57e-18 87.8
MS.gene072547.t1 AT3G58920 26.455 378 225 10 169 503 2 369 5.40e-18 87.4
MS.gene072547.t1 AT3G59170 27.488 422 213 15 169 518 7 407 5.84e-18 87.4
MS.gene072547.t1 AT5G41830 27.612 402 218 13 164 514 8 387 6.29e-18 87.4
MS.gene072547.t1 AT3G26930 28.467 411 249 15 169 562 21 403 6.66e-18 87.0
MS.gene072547.t1 AT5G56370 27.660 423 254 15 169 574 2 389 1.24e-17 85.9
MS.gene072547.t1 AT5G56370 27.660 423 254 15 169 574 2 389 1.24e-17 85.9
MS.gene072547.t1 AT3G59200 27.720 386 199 15 168 500 6 364 1.24e-17 85.5
MS.gene072547.t1 AT5G53635 30.075 399 228 18 171 538 2 380 1.92e-17 85.5
MS.gene072547.t1 AT1G78760 27.174 368 207 13 167 500 14 354 2.15e-17 85.5
MS.gene072547.t1 AT1G66290 27.460 437 245 20 162 564 23 421 2.45e-17 85.5
MS.gene072547.t1 AT3G58900 27.536 414 241 11 169 538 2 400 2.70e-17 85.5
MS.gene072547.t1 AT3G58980 27.733 375 227 13 169 511 2 364 2.93e-17 85.9
MS.gene072547.t1 AT5G56420 25.178 421 277 14 168 575 5 400 4.09e-17 84.3
MS.gene072547.t1 AT5G56420 25.178 421 277 14 168 575 5 400 4.09e-17 84.3
MS.gene072547.t1 AT5G56420 25.178 421 277 14 168 575 5 400 4.09e-17 84.3
MS.gene072547.t1 AT5G41840 25.945 397 222 12 169 509 14 394 5.30e-17 84.7
MS.gene072547.t1 AT4G00320 26.963 382 218 11 164 500 8 373 5.93e-17 84.3
MS.gene072547.t1 AT3G58860 26.648 364 209 11 166 497 4 341 6.06e-17 84.3
MS.gene072547.t1 AT1G51370 33.065 248 126 8 167 399 17 239 9.90e-17 82.4
MS.gene072547.t1 AT3G56780 25.333 450 263 16 171 565 9 440 1.04e-16 83.6
MS.gene072547.t1 AT4G13965 27.990 418 247 18 169 566 10 393 1.08e-16 83.2
MS.gene072547.t1 AT1G66310 26.984 378 221 15 154 499 2 356 1.30e-16 83.2
MS.gene072547.t1 AT1G80470 24.880 418 271 16 167 562 13 409 1.43e-16 83.2
MS.gene072547.t1 AT3G26930 27.604 384 233 15 196 562 3 358 1.80e-16 82.4
MS.gene072547.t1 AT3G03040 26.810 373 216 9 169 500 2 358 1.88e-16 82.8
MS.gene072547.t1 AT5G56560 27.316 421 242 18 166 560 2 384 2.17e-16 82.0
MS.gene072547.t1 AT4G15060 28.010 382 213 19 152 500 10 362 5.24e-16 80.9
MS.gene072547.t1 AT5G22700 28.501 407 222 18 169 538 6 380 5.94e-16 80.9
MS.gene072547.t1 AT5G22700 28.501 407 222 18 169 538 6 380 5.94e-16 80.9
MS.gene072547.t1 AT5G22700 28.501 407 222 18 169 538 6 380 5.94e-16 80.9
MS.gene072547.t1 AT5G22700 28.501 407 222 18 169 538 6 380 5.94e-16 80.9
MS.gene072547.t1 AT3G49030 26.230 427 251 17 167 566 19 408 7.59e-16 80.5
MS.gene072547.t1 AT5G18780 25.587 426 255 14 169 562 11 406 1.12e-15 80.1
MS.gene072547.t1 AT5G18780 25.587 426 255 14 169 562 11 406 1.12e-15 80.1
MS.gene072547.t1 AT2G04230 26.136 440 271 15 169 583 13 423 1.27e-15 80.1
MS.gene072547.t1 AT5G22700 28.176 433 230 21 169 561 43 434 1.30e-15 80.1
MS.gene072547.t1 AT1G55030 27.073 410 252 17 169 562 19 397 2.13e-15 79.3
MS.gene072547.t1 AT3G59240 25.400 437 275 13 169 573 8 425 2.30e-15 79.3
MS.gene072547.t1 AT4G10420 28.972 321 190 13 252 564 1 291 2.34e-15 77.8
MS.gene072547.t1 AT1G55030 27.073 410 252 17 169 562 9 387 2.64e-15 79.0
MS.gene072547.t1 AT5G56700 31.161 353 200 19 228 566 29 352 2.85e-15 78.2
MS.gene072547.t1 AT2G42730 27.078 373 201 16 169 497 5 350 3.69e-15 78.6
MS.gene072547.t1 AT5G22660 25.835 449 281 17 169 586 13 440 3.77e-15 78.6
MS.gene072547.t1 AT5G22730 24.941 425 268 12 169 562 28 432 3.80e-15 78.6
MS.gene072547.t1 AT5G22730 24.941 425 268 12 169 562 28 432 3.80e-15 78.6
MS.gene072547.t1 AT3G42770 29.692 357 177 14 174 488 4 328 6.99e-15 78.2
MS.gene072547.t1 AT4G13960 26.902 368 216 11 229 569 10 351 7.20e-15 77.4
MS.gene072547.t1 AT4G13960 26.902 368 216 11 229 569 10 351 7.20e-15 77.4
MS.gene072547.t1 AT2G29910 29.096 354 188 16 164 474 24 357 9.13e-15 76.6
MS.gene072547.t1 AT5G15620 28.608 395 244 13 169 538 2 383 1.12e-14 77.0
MS.gene072547.t1 AT5G18770 26.526 426 258 15 169 562 24 426 1.12e-14 77.4
MS.gene072547.t1 AT2G29910 29.143 350 185 16 168 474 4 333 1.53e-14 75.9
MS.gene072547.t1 AT2G29910 29.143 350 185 16 168 474 4 333 1.53e-14 75.9
MS.gene072547.t1 AT2G29910 29.143 350 185 16 168 474 4 333 1.53e-14 75.9
MS.gene072547.t1 AT2G29910 29.143 350 185 16 168 474 4 333 1.53e-14 75.9
MS.gene072547.t1 AT5G56410 24.888 446 268 17 169 574 2 420 1.90e-14 76.6
MS.gene072547.t1 AT1G66320 25.053 475 274 18 151 585 18 450 1.92e-14 76.3
MS.gene072547.t1 AT3G58940 25.627 359 218 10 169 500 2 338 3.08e-14 76.3
MS.gene072547.t1 AT3G58940 25.627 359 218 10 169 500 2 338 3.08e-14 76.3
MS.gene072547.t1 AT3G03030 27.523 327 181 10 169 450 2 317 5.70e-14 73.9
MS.gene072547.t1 AT5G56810 26.824 425 245 15 169 564 15 402 1.15e-13 73.9
MS.gene072547.t1 AT5G38590 27.759 299 173 11 169 447 2 277 2.54e-13 71.2
MS.gene072547.t1 AT3G58900 27.864 323 183 8 169 451 2 314 3.18e-13 71.2
MS.gene072547.t1 AT5G56820 24.638 414 254 13 169 564 15 388 3.20e-13 72.4
MS.gene072547.t1 AT3G52680 29.692 357 190 15 169 499 21 342 3.86e-13 71.6
MS.gene072547.t1 AT1G48400 24.814 403 223 11 168 509 9 392 6.54e-13 71.6
MS.gene072547.t1 AT4G15060 29.762 252 137 10 169 397 172 406 6.89e-13 71.6
MS.gene072547.t1 AT3G58900 27.692 325 179 8 169 450 2 313 9.38e-13 70.1
MS.gene072547.t1 AT3G58900 27.692 325 179 8 169 450 2 313 9.38e-13 70.1
MS.gene072547.t1 AT3G49150 23.707 464 300 17 167 589 14 464 1.04e-12 70.9
MS.gene072547.t1 AT3G59180 25.515 388 225 13 228 573 48 413 1.17e-12 70.9
MS.gene072547.t1 AT3G56780 25.059 423 244 16 171 538 9 413 1.61e-12 70.1
MS.gene072547.t1 AT5G22610 27.064 436 254 17 169 562 18 431 1.71e-12 70.5
MS.gene072547.t1 AT5G18780 25.138 362 215 10 169 499 11 347 1.79e-12 69.7
MS.gene072547.t1 AT5G18780 25.138 362 215 10 169 499 11 347 1.79e-12 69.7
MS.gene072547.t1 AT4G09920 26.885 305 173 9 169 448 2 281 1.86e-12 68.9
MS.gene072547.t1 AT4G09920 26.885 305 173 9 169 448 2 281 1.86e-12 68.9
MS.gene072547.t1 AT5G38392 34.483 203 110 6 169 352 2 200 2.07e-12 67.4
MS.gene072547.t1 AT3G44060 28.499 393 228 21 174 538 4 371 2.25e-12 69.7
MS.gene072547.t1 AT1G22000 26.559 433 256 19 162 564 22 422 2.25e-12 70.1
MS.gene072547.t1 AT3G54910 27.381 336 212 11 232 564 36 342 2.47e-12 69.3
MS.gene072547.t1 AT3G54910 27.381 336 212 11 232 564 36 342 2.47e-12 69.3
MS.gene072547.t1 AT3G54910 27.381 336 212 11 232 564 36 342 2.47e-12 69.3
MS.gene072547.t1 AT5G22610 27.251 422 241 17 169 562 18 401 3.24e-12 69.3
MS.gene072547.t1 AT5G35995 27.559 381 215 18 168 515 4 356 3.31e-12 69.3
MS.gene072547.t1 AT5G35995 27.559 381 215 18 168 515 4 356 3.31e-12 69.3
MS.gene072547.t1 AT5G18770 27.095 358 211 13 169 495 24 362 3.73e-12 68.6
MS.gene072547.t1 AT3G26922 31.429 245 142 12 169 399 14 246 4.00e-12 67.8
MS.gene072547.t1 AT3G26922 31.429 245 142 12 169 399 14 246 4.00e-12 67.8
MS.gene072547.t1 AT1G21990 28.424 387 207 17 169 509 9 371 4.40e-12 68.9
MS.gene072547.t1 AT4G09920 26.974 304 172 9 169 447 2 280 4.70e-12 67.4
MS.gene072547.t1 AT4G09920 26.974 304 172 9 169 447 2 280 4.70e-12 67.4
MS.gene072547.t1 AT4G09920 26.974 304 172 9 169 447 2 280 4.70e-12 67.4
MS.gene072547.t1 AT5G44970 25.420 417 224 15 167 563 2 351 5.42e-12 68.2
MS.gene072547.t1 AT3G44810 28.333 360 213 14 171 500 9 353 7.60e-12 68.2
MS.gene072547.t1 AT2G29910 30.712 267 152 13 168 417 4 254 7.87e-12 67.4
MS.gene072547.t1 AT2G29910 30.712 267 152 13 168 417 4 254 7.87e-12 67.4
MS.gene072547.t1 AT4G03220 24.390 451 276 14 169 564 24 464 1.15e-11 67.8
MS.gene072547.t1 AT2G26030 25.779 353 193 15 253 569 21 340 1.54e-11 66.6
MS.gene072547.t1 AT5G22730 27.372 274 164 8 169 418 28 290 1.55e-11 67.0
MS.gene072547.t1 AT3G58930 25.275 364 210 13 169 500 2 335 4.27e-11 65.9
MS.gene072547.t1 AT3G58930 25.275 364 210 13 169 500 2 335 4.27e-11 65.9
MS.gene072547.t1 AT3G49030 25.412 425 231 17 167 566 19 382 5.30e-11 65.5
MS.gene072547.t1 AT5G56370 28.198 344 204 13 169 499 2 315 7.87e-11 64.3

Find 106 sgRNAs with CRISPR-Local

Find 142 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCATTGCATTTGAATTTAA+AGG 0.125528 7.3:+4303043 MS.gene072547:CDS
GTTTACAACCTCATATATTA+TGG 0.172229 7.3:-4302398 None:intergenic
TATTGCCGCTTAGGCTTTCT+AGG 0.227353 7.3:+4302023 MS.gene072547:CDS
TCACAATTTATTATCTTTAT+CGG 0.257922 7.3:+4302688 MS.gene072547:CDS
ATGGCAAGATCCTTAAGTTT+TGG 0.281670 7.3:-4302767 None:intergenic
TTCTACTACTTTCTCTGAAT+CGG 0.286108 7.3:-4303152 None:intergenic
CATCCGAGAGATTGCTTAAT+CGG 0.321375 7.3:-4301262 None:intergenic
CTATAGGCATGAATAAATAA+AGG 0.338690 7.3:-4302297 None:intergenic
TTCCATGGAGCAACAATTCC+AGG 0.342388 7.3:-4301994 None:intergenic
CGTCCGAGAGATTGCTTAAT+CGG 0.359389 7.3:-4301394 None:intergenic
CGTCTGAGAGGTTGCTTAAT+CGG 0.364741 7.3:-4301703 None:intergenic
CGTCCGAGAGATTGCTTAAT+CGG 0.375246 7.3:-4301364 None:intergenic
CATACTCCAACTGCAATTAT+CGG 0.380917 7.3:-4302720 None:intergenic
TCTATCCGGTTGTCCACATC+TGG 0.385568 7.3:+4302204 MS.gene072547:CDS
AGAAAGCCTAAGCGGCAATA+AGG 0.385894 7.3:-4302020 None:intergenic
CGTCCGAGAGATCGCTTAAT+CGG 0.392337 7.3:-4301601 None:intergenic
ACTTGTGGTCTTGAAGTTGC+GGG 0.396664 7.3:+4302054 MS.gene072547:CDS
TAAGACGCACCGAAAATATC+AGG 0.397351 7.3:+4301879 MS.gene072547:CDS
AAAGTGAAGGTCGGGGATCT+TGG 0.398450 7.3:-4301813 None:intergenic
TCTACTACTTTCTCTGAATC+GGG 0.403758 7.3:-4303151 None:intergenic
TAAGAGAAAGGAGATATTGA+TGG 0.410077 7.3:-4302260 None:intergenic
AAGAGTAGCTTCATCAAGAT+TGG 0.412017 7.3:-4302425 None:intergenic
ACAATTCCAGGTCAAGTTCC+TGG 0.413747 7.3:-4301982 None:intergenic
ACCCACATGTGTACATCTTC+TGG 0.416507 7.3:-4301935 None:intergenic
ACATAATACTCCAAAACTTA+AGG 0.417295 7.3:+4302757 MS.gene072547:CDS
TTTACAACCTCATATATTAT+GGG 0.427764 7.3:-4302397 None:intergenic
ACAGATTGGTATGGAATCTC+TGG 0.431531 7.3:-4301842 None:intergenic
ATCTTCGCCCATAATATATG+AGG 0.437696 7.3:+4302390 MS.gene072547:CDS
AATGTCAAATCATTGACTCT+TGG 0.439784 7.3:+4302505 MS.gene072547:CDS
GGTAATTCAAAGTGAAGGTC+GGG 0.442498 7.3:-4301821 None:intergenic
GTTGGAAACTCGAGTTGGGT+GGG 0.456767 7.3:+4302986 MS.gene072547:CDS
TTCCTCCAGATGTGGACAAC+CGG 0.460395 7.3:-4302209 None:intergenic
CACTTGTGGTCTTGAAGTTG+CGG 0.461529 7.3:+4302053 MS.gene072547:CDS
ACTTAAGGATCTTGCCATTG+AGG 0.465062 7.3:+4302772 MS.gene072547:CDS
TATAGGCATGAATAAATAAA+GGG 0.474257 7.3:-4302296 None:intergenic
TTCATATATATCAAGGATTG+AGG 0.474301 7.3:+4301187 MS.gene072547:intron
GTCGGGGATCTTGGTGCAGA+TGG 0.474821 7.3:-4301804 None:intergenic
TGAAAGACATGTCGGAGTTA+CGG 0.477178 7.3:-4303014 None:intergenic
AAATTCAAATGCAATGAGAC+TGG 0.478300 7.3:-4303038 None:intergenic
TCAAAAGAAGAACTGAATCC+TGG 0.483175 7.3:-4302088 None:intergenic
CCAATGTGAGATGCAACTAT+AGG 0.493695 7.3:-4302313 None:intergenic
TAATCTCTTTAATAAGAGAA+AGG 0.493855 7.3:-4302272 None:intergenic
CAAGGTCCAGGAACTTGACC+TGG 0.494419 7.3:+4301976 MS.gene072547:CDS
GATCTCGATAAATTTCTATC+CGG 0.494922 7.3:+4302190 MS.gene072547:CDS
GGCATTAGATCTCAAGGTCC+AGG 0.496808 7.3:+4301964 MS.gene072547:CDS
GAAATCCTCGGTACTAGTAT+TGG 0.498768 7.3:+4303198 MS.gene072547:CDS
TAGAAAGAACTTCAAGTGAC+GGG 0.502699 7.3:-4302354 None:intergenic
TTCTAGGTGTGAGTCACTTG+TGG 0.504741 7.3:+4302039 MS.gene072547:CDS
GGAGGTTGGAAACTCGAGTT+GGG 0.509671 7.3:+4302982 MS.gene072547:CDS
TGTACACATGTGGGTTTCAA+AGG 0.516400 7.3:+4301943 MS.gene072547:CDS
GAAGAGCAGCATATACAGAT+TGG 0.520233 7.3:-4301856 None:intergenic
AGTAGAAAGAAGTTTACTCA+AGG 0.539582 7.3:+4303168 MS.gene072547:CDS
CTAAGTCTCGATAGTGTGGT+AGG 0.540995 7.3:+4301905 MS.gene072547:CDS
TTCAAAGGCATTAGATCTCA+AGG 0.542872 7.3:+4301958 MS.gene072547:CDS
GTAGAAAGAAGTTTACTCAA+GGG 0.543204 7.3:+4303169 MS.gene072547:CDS
AAACATCATACATACCTCAA+TGG 0.547505 7.3:-4302786 None:intergenic
AGACGAGAATTCTGAAACAG+TGG 0.550727 7.3:+4301214 MS.gene072547:CDS
GCAGCATATACAGATTGGTA+TGG 0.551486 7.3:-4301851 None:intergenic
AATTCTCAAAGAAAGGAGGT+TGG 0.554584 7.3:+4302968 MS.gene072547:CDS
GACCTGGAATTGTTGCTCCA+TGG 0.556784 7.3:+4301992 MS.gene072547:CDS
GACGGGGCATTAATTTGCAC+AGG 0.557868 7.3:-4302337 None:intergenic
GGTGCAGATGGATCCCCACC+TGG 0.563183 7.3:-4301792 None:intergenic
AGACGAGAATTCTGAAACAG+TGG 0.563383 7.3:+4301316 MS.gene072547:CDS
TTGGAAACTCGAGTTGGGTG+GGG 0.565472 7.3:+4302987 MS.gene072547:CDS
AGACGAGAATTCTGAAACAG+TGG 0.570560 7.3:+4301655 MS.gene072547:CDS
AGGAGGTTGGAAACTCGAGT+TGG 0.571978 7.3:+4302981 MS.gene072547:CDS
TCACTCAAGGAAGTTAGAGC+GGG 0.572851 7.3:+4303114 MS.gene072547:CDS
GATCCGATTAAGCAATCTCT+CGG 0.573432 7.3:+4301391 MS.gene072547:CDS
CGACCGATTAAGCGATCTCT+CGG 0.576048 7.3:+4301598 MS.gene072547:CDS
AAAAGTAATTCCTCCAGATG+TGG 0.578065 7.3:-4302217 None:intergenic
AAGAGAAAGGAGATATTGAT+GGG 0.580175 7.3:-4302259 None:intergenic
TGGTAATTCAAAGTGAAGGT+CGG 0.580635 7.3:-4301822 None:intergenic
TGTTATGCAGATTATCAGCA+TGG 0.581338 7.3:+4302631 MS.gene072547:intron
AAATATCCGATAATTGCAGT+TGG 0.583465 7.3:+4302714 MS.gene072547:CDS
TGACCGATTAAGCAATCTCT+CGG 0.587870 7.3:+4301259 MS.gene072547:CDS
TTGCGGGGCAGAATTCGTCC+AGG 0.590859 7.3:+4302070 MS.gene072547:CDS
ATAGAAAGAACTTCAAGTGA+CGG 0.600777 7.3:-4302355 None:intergenic
ATCCGGTTGTCCACATCTGG+AGG 0.605027 7.3:+4302207 MS.gene072547:CDS
CCTATAGTTGCATCTCACAT+TGG 0.605957 7.3:+4302313 MS.gene072547:CDS
GGTTGGAAACTCGAGTTGGG+TGG 0.608269 7.3:+4302985 MS.gene072547:CDS
TGTATATTATAAATCACTCA+AGG 0.609042 7.3:+4303101 MS.gene072547:CDS
TAGAAAGAAGTTTACTCAAG+GGG 0.610799 7.3:+4303170 MS.gene072547:CDS
TGTGTTCTATCCACCAGGTG+GGG 0.610984 7.3:+4301779 MS.gene072547:CDS
ATCACTCAAGGAAGTTAGAG+CGG 0.615827 7.3:+4303113 MS.gene072547:CDS
TGACCGATTAAGCAATCTCT+CGG 0.617269 7.3:+4301361 MS.gene072547:CDS
GAACATGTGTTCTATCCACC+AGG 0.618313 7.3:+4301774 MS.gene072547:CDS
GAAACTAAGTCTCGATAGTG+TGG 0.619964 7.3:+4301901 MS.gene072547:CDS
ATGTGTTCTATCCACCAGGT+GGG 0.627828 7.3:+4301778 MS.gene072547:CDS
AACCAGAAGATGTACACATG+TGG 0.628998 7.3:+4301933 MS.gene072547:CDS
AGACATGTCGGAGTTACGGA+TGG 0.631627 7.3:-4303010 None:intergenic
TCTCTGGTAATTCAAAGTGA+AGG 0.632891 7.3:-4301826 None:intergenic
GAGAATTCTGAAACAGTGGT+AGG 0.633377 7.3:+4301659 MS.gene072547:CDS
ACCAGAAGATGTACACATGT+GGG 0.637381 7.3:+4301934 MS.gene072547:CDS
CTTGTGGTCTTGAAGTTGCG+GGG 0.638622 7.3:+4302055 MS.gene072547:CDS
AGATGAAGAATCTTTAGTGA+CGG 0.643601 7.3:-4302121 None:intergenic
AGTCTGTATACACTCATGAA+AGG 0.644670 7.3:+4302475 MS.gene072547:CDS
TCATACCAATACTAGTACCG+AGG 0.645128 7.3:-4303203 None:intergenic
GTAATTCAAAGTGAAGGTCG+GGG 0.651989 7.3:-4301820 None:intergenic
CAAGGGGTCAGAGAAATCCT+CGG 0.659059 7.3:+4303186 MS.gene072547:CDS
AGACTGGTTGAAAGACATGT+CGG 0.659512 7.3:-4303022 None:intergenic
TCACACCTAGAAAGCCTAAG+CGG 0.681212 7.3:-4302028 None:intergenic
CATGTGTTCTATCCACCAGG+TGG 0.687954 7.3:+4301777 MS.gene072547:CDS
AGACGAGAATTATGAAACAG+TGG 0.690294 7.3:+4301448 MS.gene072547:CDS
AGAAAGAACTTCAAGTGACG+GGG 0.690501 7.3:-4302353 None:intergenic
GCAGATGGATCCCCACCTGG+TGG 0.714103 7.3:-4301789 None:intergenic
TATGCAGATTATCAGCATGG+AGG 0.721753 7.3:+4302634 MS.gene072547:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGATTTGATTTTTAATATT+AGG + chr7.3:4301282-4301301 MS.gene072547:CDS 10.0%
!! TCACAATTTATTATCTTTAT+CGG + chr7.3:4302688-4302707 MS.gene072547:CDS 15.0%
!!! AAGATTCTAATGATAATTTT+TGG + chr7.3:4302914-4302933 MS.gene072547:intron 15.0%
!!! ATTTGCACAAATTTTTAAAA+AGG + chr7.3:4302819-4302838 MS.gene072547:intron 15.0%
!! TAATCTCTTTAATAAGAGAA+AGG - chr7.3:4302275-4302294 None:intergenic 20.0%
!! TATAGGCATGAATAAATAAA+GGG - chr7.3:4302299-4302318 None:intergenic 20.0%
!! TGAAAAAAATTCTCAAAGAA+AGG + chr7.3:4302961-4302980 MS.gene072547:CDS 20.0%
!! TGTATATTATAAATCACTCA+AGG + chr7.3:4303101-4303120 MS.gene072547:CDS 20.0%
!! TTGATATATATGAAAGAGAA+CGG - chr7.3:4301181-4301200 None:intergenic 20.0%
!! TTTACAACCTCATATATTAT+GGG - chr7.3:4302400-4302419 None:intergenic 20.0%
!!! ACGATTTGACTTTTAATATT+AGG + chr7.3:4301516-4301535 MS.gene072547:CDS 20.0%
!!! ACGATTTGATTTTTCATATT+AGG + chr7.3:4301414-4301433 MS.gene072547:CDS 20.0%
!!! ATGTAATTTGTGTTTGTTTT+TGG + chr7.3:4301113-4301132 MS.gene072547:intron 20.0%
!!! GATTTTTAATATTAGGATTG+AGG + chr7.3:4301289-4301308 MS.gene072547:CDS 20.0%
! AAAAAATTCTCAAAGAAAGG+AGG + chr7.3:4302964-4302983 MS.gene072547:CDS 25.0%
! AATGAAAAGAGATTTGCATA+TGG - chr7.3:4302602-4302621 None:intergenic 25.0%
! ACATAATACTCCAAAACTTA+AGG + chr7.3:4302757-4302776 MS.gene072547:CDS 25.0%
! ATAGTTTAGAGACGAAATAA+TGG + chr7.3:4300954-4300973 MS.gene072547:intron 25.0%
! ATGAAAAGAGATTTGCATAT+GGG - chr7.3:4302601-4302620 None:intergenic 25.0%
! CTATAGGCATGAATAAATAA+AGG - chr7.3:4302300-4302319 None:intergenic 25.0%
! CTCATTGCATTTGAATTTAA+AGG + chr7.3:4303043-4303062 MS.gene072547:CDS 25.0%
! GTTCTCTTTCATATATATCA+AGG + chr7.3:4301180-4301199 MS.gene072547:intron 25.0%
! GTTTACAACCTCATATATTA+TGG - chr7.3:4302401-4302420 None:intergenic 25.0%
! TCAAAACATAAAAACTGAGT+TGG + chr7.3:4303069-4303088 MS.gene072547:CDS 25.0%
! TTCATATATATCAAGGATTG+AGG + chr7.3:4301187-4301206 MS.gene072547:intron 25.0%
!! ACTTAGTTTCCTGATATTTT+CGG - chr7.3:4301891-4301910 None:intergenic 25.0%
!! GACTTTTAATATTAGGATTG+AGG + chr7.3:4301523-4301542 MS.gene072547:CDS 25.0%
!! GATTTTTCATATTAGGATTG+AGG + chr7.3:4301421-4301440 MS.gene072547:CDS 25.0%
!! TATAAGACTCTTTTGTTGAT+AGG - chr7.3:4301754-4301773 None:intergenic 25.0%
AAACATCATACATACCTCAA+TGG - chr7.3:4302789-4302808 None:intergenic 30.0%
AAATATCCGATAATTGCAGT+TGG + chr7.3:4302714-4302733 MS.gene072547:CDS 30.0%
AAATTCAAATGCAATGAGAC+TGG - chr7.3:4303041-4303060 None:intergenic 30.0%
AAGAGAAAGGAGATATTGAT+GGG - chr7.3:4302262-4302281 None:intergenic 30.0%
AGATGAAGAATCTTTAGTGA+CGG - chr7.3:4302124-4302143 None:intergenic 30.0%
AGTAGAAAGAAGTTTACTCA+AGG + chr7.3:4303168-4303187 MS.gene072547:CDS 30.0%
ATACAAAACCCTAAGTGAAA+AGG - chr7.3:4301028-4301047 None:intergenic 30.0%
ATAGAAAGAACTTCAAGTGA+CGG - chr7.3:4302358-4302377 None:intergenic 30.0%
GATCTCGATAAATTTCTATC+CGG + chr7.3:4302190-4302209 MS.gene072547:CDS 30.0%
GTAGAAAGAAGTTTACTCAA+GGG + chr7.3:4303169-4303188 MS.gene072547:CDS 30.0%
GTATACAGACTGTAAAAATC+TGG - chr7.3:4302466-4302485 None:intergenic 30.0%
TAAGAGAAAGGAGATATTGA+TGG - chr7.3:4302263-4302282 None:intergenic 30.0%
TAGAAAGAAGTTTACTCAAG+GGG + chr7.3:4303170-4303189 MS.gene072547:CDS 30.0%
TTCTACTACTTTCTCTGAAT+CGG - chr7.3:4303155-4303174 None:intergenic 30.0%
! TTTTCATATTAGGATTGAGG+AGG + chr7.3:4301424-4301443 MS.gene072547:CDS 30.0%
!! AATGTCAAATCATTGACTCT+TGG + chr7.3:4302505-4302524 MS.gene072547:CDS 30.0%
!! TTCATCCTGTGTTTTTATGA+AGG + chr7.3:4300996-4301015 MS.gene072547:intron 30.0%
AAAAGAGATTTGCATATGGG+TGG - chr7.3:4302598-4302617 None:intergenic 35.0%
AAAAGTAATTCCTCCAGATG+TGG - chr7.3:4302220-4302239 None:intergenic 35.0%
AAGAGTAGCTTCATCAAGAT+TGG - chr7.3:4302428-4302447 None:intergenic 35.0%
AATGGTGTGTGAACTTAGAT+AGG + chr7.3:4300972-4300991 MS.gene072547:intron 35.0%
AATTCTCAAAGAAAGGAGGT+TGG + chr7.3:4302968-4302987 MS.gene072547:CDS 35.0%
AGACGAGAATTATGAAACAG+TGG + chr7.3:4301448-4301467 MS.gene072547:CDS 35.0%
AGTAAAAGATACGCAGAGTT+TGG + chr7.3:4302891-4302910 MS.gene072547:intron 35.0%
AGTCTGTATACACTCATGAA+AGG + chr7.3:4302475-4302494 MS.gene072547:CDS 35.0%
ATCTTCGCCCATAATATATG+AGG + chr7.3:4302390-4302409 MS.gene072547:CDS 35.0%
CAATGCCTTCATAAAAACAC+AGG - chr7.3:4301004-4301023 None:intergenic 35.0%
CATACTCCAACTGCAATTAT+CGG - chr7.3:4302723-4302742 None:intergenic 35.0%
CGTCTCTAAACTATCTATGA+TGG - chr7.3:4300948-4300967 None:intergenic 35.0%
GAAAAATCAAATCGTCTGAG+AGG - chr7.3:4301718-4301737 None:intergenic 35.0%
TAATCGATGCATGTATGACA+TGG + chr7.3:4301053-4301072 MS.gene072547:intron 35.0%
TAGAAAGAACTTCAAGTGAC+GGG - chr7.3:4302357-4302376 None:intergenic 35.0%
TCAAAAGAAGAACTGAATCC+TGG - chr7.3:4302091-4302110 None:intergenic 35.0%
TCTACTACTTTCTCTGAATC+GGG - chr7.3:4303154-4303173 None:intergenic 35.0%
TCTCTGGTAATTCAAAGTGA+AGG - chr7.3:4301829-4301848 None:intergenic 35.0%
TGGTAATTCAAAGTGAAGGT+CGG - chr7.3:4301825-4301844 None:intergenic 35.0%
TGTTATGCAGATTATCAGCA+TGG + chr7.3:4302631-4302650 MS.gene072547:intron 35.0%
! AACTCTGCGTATCTTTTACT+TGG - chr7.3:4302891-4302910 None:intergenic 35.0%
! ATGGCAAGATCCTTAAGTTT+TGG - chr7.3:4302770-4302789 None:intergenic 35.0%
! GATTTTTCATATCACGATCG+AGG + chr7.3:4301628-4301647 MS.gene072547:CDS 35.0%
!! TCTGGAGGAATTACTTTTAG+AGG + chr7.3:4302222-4302241 MS.gene072547:CDS 35.0%
!! TTCAAAGGCATTAGATCTCA+AGG + chr7.3:4301958-4301977 MS.gene072547:CDS 35.0%
AACCAGAAGATGTACACATG+TGG + chr7.3:4301933-4301952 MS.gene072547:CDS 40.0%
ACAGATTGGTATGGAATCTC+TGG - chr7.3:4301845-4301864 None:intergenic 40.0%
ACCAGAAGATGTACACATGT+GGG + chr7.3:4301934-4301953 MS.gene072547:CDS 40.0%
ACTTAAGGATCTTGCCATTG+AGG + chr7.3:4302772-4302791 MS.gene072547:CDS 40.0%
AGAAAGAACTTCAAGTGACG+GGG - chr7.3:4302356-4302375 None:intergenic 40.0%
ATCACTCAAGGAAGTTAGAG+CGG + chr7.3:4303113-4303132 MS.gene072547:CDS 40.0%
CATCCGAGAGATTGCTTAAT+CGG - chr7.3:4301265-4301284 None:intergenic 40.0%
CCAATGTGAGATGCAACTAT+AGG - chr7.3:4302316-4302335 None:intergenic 40.0%
CCTATAGTTGCATCTCACAT+TGG + chr7.3:4302313-4302332 MS.gene072547:CDS 40.0%
GAAACTAAGTCTCGATAGTG+TGG + chr7.3:4301901-4301920 MS.gene072547:CDS 40.0%
GAAATCCTCGGTACTAGTAT+TGG + chr7.3:4303198-4303217 MS.gene072547:CDS 40.0%
GAAGAGCAGCATATACAGAT+TGG - chr7.3:4301859-4301878 None:intergenic 40.0%
GATCCGATTAAGCAATCTCT+CGG + chr7.3:4301391-4301410 MS.gene072547:CDS 40.0%
GCAGCATATACAGATTGGTA+TGG - chr7.3:4301854-4301873 None:intergenic 40.0%
GGTAATTCAAAGTGAAGGTC+GGG - chr7.3:4301824-4301843 None:intergenic 40.0%
GTAATTCAAAGTGAAGGTCG+GGG - chr7.3:4301823-4301842 None:intergenic 40.0%
TAAGACGCACCGAAAATATC+AGG + chr7.3:4301879-4301898 MS.gene072547:CDS 40.0%
TATGCAGATTATCAGCATGG+AGG + chr7.3:4302634-4302653 MS.gene072547:intron 40.0%
TCATACCAATACTAGTACCG+AGG - chr7.3:4303206-4303225 None:intergenic 40.0%
TGAAAGACATGTCGGAGTTA+CGG - chr7.3:4303017-4303036 None:intergenic 40.0%
TGACCGATTAAGCAATCTCT+CGG + chr7.3:4301259-4301278 MS.gene072547:CDS 40.0%
TGCATATGGGTGGCAAAATA+TGG - chr7.3:4302588-4302607 None:intergenic 40.0%
TGTACACATGTGGGTTTCAA+AGG + chr7.3:4301943-4301962 MS.gene072547:CDS 40.0%
! AACTATCTATGATGGTGCTC+AGG - chr7.3:4300940-4300959 None:intergenic 40.0%
! ACTATCTATGATGGTGCTCA+GGG - chr7.3:4300939-4300958 None:intergenic 40.0%
! AGACTGGTTGAAAGACATGT+CGG - chr7.3:4303025-4303044 None:intergenic 40.0%
! GAAAAACCTTATTGCCGCTT+AGG + chr7.3:4302014-4302033 MS.gene072547:CDS 40.0%
!! AGACGAGAATTCTGAAACAG+TGG + chr7.3:4301214-4301233 MS.gene072547:CDS 40.0%
!! GAGAATTCTGAAACAGTGGT+AGG + chr7.3:4301218-4301237 MS.gene072547:CDS 40.0%
!!! AGGCATTGACCTTTTCACTT+AGG + chr7.3:4301016-4301035 MS.gene072547:intron 40.0%
!!! GGCATTGACCTTTTCACTTA+GGG + chr7.3:4301017-4301036 MS.gene072547:intron 40.0%
ACAATTCCAGGTCAAGTTCC+TGG - chr7.3:4301985-4302004 None:intergenic 45.0%
ACCCACATGTGTACATCTTC+TGG - chr7.3:4301938-4301957 None:intergenic 45.0%
AGAAAGCCTAAGCGGCAATA+AGG - chr7.3:4302023-4302042 None:intergenic 45.0%
ATGTGTTCTATCCACCAGGT+GGG + chr7.3:4301778-4301797 MS.gene072547:CDS 45.0%
CGTCCGAGAGATTGCTTAAT+CGG - chr7.3:4301367-4301386 None:intergenic 45.0%
CGTCTGAGAGGTTGCTTAAT+CGG - chr7.3:4301706-4301725 None:intergenic 45.0%
CTAAGTCTCGATAGTGTGGT+AGG + chr7.3:4301905-4301924 MS.gene072547:CDS 45.0%
GAACATGTGTTCTATCCACC+AGG + chr7.3:4301774-4301793 MS.gene072547:CDS 45.0%
TCACACCTAGAAAGCCTAAG+CGG - chr7.3:4302031-4302050 None:intergenic 45.0%
TCACTCAAGGAAGTTAGAGC+GGG + chr7.3:4303114-4303133 MS.gene072547:CDS 45.0%
TTCCATGGAGCAACAATTCC+AGG - chr7.3:4301997-4302016 None:intergenic 45.0%
TTCTAGGTGTGAGTCACTTG+TGG + chr7.3:4302039-4302058 MS.gene072547:CDS 45.0%
! ACTTGTGGTCTTGAAGTTGC+GGG + chr7.3:4302054-4302073 MS.gene072547:CDS 45.0%
! CACTTGTGGTCTTGAAGTTG+CGG + chr7.3:4302053-4302072 MS.gene072547:CDS 45.0%
! GCGGCAATAAGGTTTTTCCA+TGG - chr7.3:4302012-4302031 None:intergenic 45.0%
! TATTGCCGCTTAGGCTTTCT+AGG + chr7.3:4302023-4302042 MS.gene072547:CDS 45.0%
AAAGTGAAGGTCGGGGATCT+TGG - chr7.3:4301816-4301835 None:intergenic 50.0%
AGACATGTCGGAGTTACGGA+TGG - chr7.3:4303013-4303032 None:intergenic 50.0%
AGGAGGTTGGAAACTCGAGT+TGG + chr7.3:4302981-4303000 MS.gene072547:CDS 50.0%
CAAGGGGTCAGAGAAATCCT+CGG + chr7.3:4303186-4303205 MS.gene072547:CDS 50.0%
CATGTGTTCTATCCACCAGG+TGG + chr7.3:4301777-4301796 MS.gene072547:CDS 50.0%
CGACCGATTAAGCGATCTCT+CGG + chr7.3:4301598-4301617 MS.gene072547:CDS 50.0%
CGTCCGAGAGATCGCTTAAT+CGG - chr7.3:4301604-4301623 None:intergenic 50.0%
GACCTGGAATTGTTGCTCCA+TGG + chr7.3:4301992-4302011 MS.gene072547:CDS 50.0%
GGAGGTTGGAAACTCGAGTT+GGG + chr7.3:4302982-4303001 MS.gene072547:CDS 50.0%
GGCATTAGATCTCAAGGTCC+AGG + chr7.3:4301964-4301983 MS.gene072547:CDS 50.0%
TCTATCCGGTTGTCCACATC+TGG + chr7.3:4302204-4302223 MS.gene072547:CDS 50.0%
TGTGTTCTATCCACCAGGTG+GGG + chr7.3:4301779-4301798 MS.gene072547:CDS 50.0%
TTCCTCCAGATGTGGACAAC+CGG - chr7.3:4302212-4302231 None:intergenic 50.0%
! CTTGTGGTCTTGAAGTTGCG+GGG + chr7.3:4302055-4302074 MS.gene072547:CDS 50.0%
!! GACGGGGCATTAATTTGCAC+AGG - chr7.3:4302340-4302359 None:intergenic 50.0%
!! GTTGGAAACTCGAGTTGGGT+GGG + chr7.3:4302986-4303005 MS.gene072547:CDS 50.0%
!! TTGGAAACTCGAGTTGGGTG+GGG + chr7.3:4302987-4303006 MS.gene072547:CDS 50.0%
ATCCGGTTGTCCACATCTGG+AGG + chr7.3:4302207-4302226 MS.gene072547:CDS 55.0%
CAAGGTCCAGGAACTTGACC+TGG + chr7.3:4301976-4301995 MS.gene072547:CDS 55.0%
!! GGTTGGAAACTCGAGTTGGG+TGG + chr7.3:4302985-4303004 MS.gene072547:CDS 55.0%
TTGCGGGGCAGAATTCGTCC+AGG + chr7.3:4302070-4302089 MS.gene072547:CDS 60.0%
! GTCGGGGATCTTGGTGCAGA+TGG - chr7.3:4301807-4301826 None:intergenic 60.0%
GCAGATGGATCCCCACCTGG+TGG - chr7.3:4301792-4301811 None:intergenic 65.0%
GGTGCAGATGGATCCCCACC+TGG - chr7.3:4301795-4301814 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 4300897 4303225 4300897 ID=MS.gene072547
chr7.3 mRNA 4300897 4303225 4300897 ID=MS.gene072547.t1;Parent=MS.gene072547
chr7.3 exon 4300897 4300901 4300897 ID=MS.gene072547.t1.exon1;Parent=MS.gene072547.t1
chr7.3 CDS 4300897 4300901 4300897 ID=cds.MS.gene072547.t1;Parent=MS.gene072547.t1
chr7.3 exon 4301202 4302543 4301202 ID=MS.gene072547.t1.exon2;Parent=MS.gene072547.t1
chr7.3 CDS 4301202 4302543 4301202 ID=cds.MS.gene072547.t1;Parent=MS.gene072547.t1
chr7.3 exon 4302641 4302793 4302641 ID=MS.gene072547.t1.exon3;Parent=MS.gene072547.t1
chr7.3 CDS 4302641 4302793 4302641 ID=cds.MS.gene072547.t1;Parent=MS.gene072547.t1
chr7.3 exon 4302953 4303225 4302953 ID=MS.gene072547.t1.exon4;Parent=MS.gene072547.t1
chr7.3 CDS 4302953 4303225 4302953 ID=cds.MS.gene072547.t1;Parent=MS.gene072547.t1
Gene Sequence

>MS.gene072547

ATGAGGTAAGTTTTTTTCTCAATATTAATTTTGTTTTAACCCTGAGCACCATCATAGATAGTTTAGAGACGAAATAATGGTGTGTGAACTTAGATAGGATTCATCCTGTGTTTTTATGAAGGCATTGACCTTTTCACTTAGGGTTTTGTATTTTCATAATCGATGCATGTATGACATGGACATGATATTATATGATTTTTCTTTTCTTTTTGAGTAATGTAATTTGTGTTTGTTTTTGGATCAGACTTTGAATAATTCTATGAAAGCATTTTTTTTAGTAACCGTTCTCTTTCATATATATCAAGGATTGAGGAAGTAGACGAGAATTCTGAAACAGTGGTGTGCTCTTACGAAGAAGAACATGACCGATTAAGCAATCTCTCGGATGATTTGATTTTTAATATTAGGATTGAGGAAGCAGACGAGAATTCTGAAACAGTGGTGTGCTCTTACGATGAAGAACATGACCGATTAAGCAATCTCTCGGACGATTTGATCCGATTAAGCAATCTCTCGGACGATTTGATTTTTCATATTAGGATTGAGGAGGTAGACGAGAATTATGAAACAGTGGTGTGCTCTTACGAAGAAGAACATGATCGATTAAGCAATTTCTCAGACGATTTGACTTTTAATATTAGGATTGAGGAAGCAGAAGAGAATTATTCTGAAACAGCAGTGTGCTCTTACGATGAAGAACACGACCGATTAAGCGATCTCTCGGACGATTTGATTTTTCATATCACGATCGAGGAAGCAGACGAGAATTCTGAAACAGTGGTAGGCTCTTACGATGAAGAACATGACCGATTAAGCAACCTCTCAGACGATTTGATTTTTCATATTTTGTCTTTCCTATCAACAAAAGAGTCTTATAGAACATGTGTTCTATCCACCAGGTGGGGATCCATCTGCACCAAGATCCCCGACCTTCACTTTGAATTACCAGAGATTCCATACCAATCTGTATATGCTGCTCTTCTAAGACGCACCGAAAATATCAGGAAACTAAGTCTCGATAGTGTGGTAGGCTGTCAACCAGAAGATGTACACATGTGGGTTTCAAAGGCATTAGATCTCAAGGTCCAGGAACTTGACCTGGAATTGTTGCTCCATGGAAAAACCTTATTGCCGCTTAGGCTTTCTAGGTGTGAGTCACTTGTGGTCTTGAAGTTGCGGGGCAGAATTCGTCCAGGATTCAGTTCTTCTTTTGATGTATATTTACCGTCACTAAAGATTCTTCATCTTCGATTAACTGTGTTACTTTCTATGTTTGACGATCATATCGAGTATGATCTCGATAAATTTCTATCCGGTTGTCCACATCTGGAGGAATTACTTTTAGAGGACATCTTTCAACAACCCATCAATATCTCCTTTCTCTTATTAAAGAGATTAACCCTTTATTTATTCATGCCTATAGTTGCATCTCACATTGGTCCTGTGCAAATTAATGCCCCGTCACTTGAAGTTCTTTCTATTACTGATTATTCATCTTCGCCCATAATATATGAGGTTGTAAACTTGTCCAATCTTGATGAAGCTACTCTTTTCATTGATCAGCTTCCAGATTTTTACAGTCTGTATACACTCATGAAAGGACTTTCTAATGTCAAATCATTGACTCTTGGTTCTAAAACTTTTCATGTAAGTTTCATAATTTTTTCTTTCTTTTTTAATGATAATTTCCATATTTTGCCACCCATATGCAAATCTCTTTTCATTCTTTAATCTTGTTATGCAGATTATCAGCATGGAGGACAAACTTGAAAAAGTACATCTTCTCACTTTTCACAATTTATTATCTTTATCGGTTGAAATATCCGATAATTGCAGTTGGAGTATGCTTGTTTGCTTTCTACATAATACTCCAAAACTTAAGGATCTTGCCATTGAGGTATGTATGATGTTTTCTCAACTATATTTGCACAAATTTTTAAAAAGGTAAAATATATTAATAAGCTCAAAATCTAGCACAAGAAATGCAAAGACCAAGTAAAAGATACGCAGAGTTTGGAAGATTCTAATGATAATTTTTGGTATTGTTTACATGCAGAAAGAAATTGAAAAAAATTCTCAAAGAAAGGAGGTTGGAAACTCGAGTTGGGTGGGGCCATCCGTAACTCCGACATGTCTTTCAACCAGTCTCATTGCATTTGAATTTAAAGGAATTCAAAACATAAAAACTGAGTTGGACTTTGCGCTGTATATTATAAATCACTCAAGGAAGTTAGAGCGGGTAAAGATTTTCACACCCGATTCAGAGAAAGTAGTAGAAAGAAGTTTACTCAAGGGGTCAGAGAAATCCTCGGTACTAGTATTGGTATGA

Protein sequence

>MS.gene072547.t1

MRIEEVDENSETVVCSYEEEHDRLSNLSDDLIFNIRIEEADENSETVVCSYDEEHDRLSNLSDDLIRLSNLSDDLIFHIRIEEVDENYETVVCSYEEEHDRLSNFSDDLTFNIRIEEAEENYSETAVCSYDEEHDRLSDLSDDLIFHITIEEADENSETVVGSYDEEHDRLSNLSDDLIFHILSFLSTKESYRTCVLSTRWGSICTKIPDLHFELPEIPYQSVYAALLRRTENIRKLSLDSVVGCQPEDVHMWVSKALDLKVQELDLELLLHGKTLLPLRLSRCESLVVLKLRGRIRPGFSSSFDVYLPSLKILHLRLTVLLSMFDDHIEYDLDKFLSGCPHLEELLLEDIFQQPINISFLLLKRLTLYLFMPIVASHIGPVQINAPSLEVLSITDYSSSPIIYEVVNLSNLDEATLFIDQLPDFYSLYTLMKGLSNVKSLTLGSKTFHIISMEDKLEKVHLLTFHNLLSLSVEISDNCSWSMLVCFLHNTPKLKDLAIEKEIEKNSQRKEVGNSSWVGPSVTPTCLSTSLIAFEFKGIQNIKTELDFALYIINHSRKLERVKIFTPDSEKVVERSLLKGSEKSSVLVLV