AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene07665


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07665.t1 MTR_4g056030 81.034 464 50 1 1 426 1 464 0.0 732
MS.gene07665.t1 MTR_4g056020 77.111 450 65 1 1 412 1 450 0.0 676
MS.gene07665.t1 MTR_4g055990 70.325 492 66 4 1 412 1 492 0.0 635
MS.gene07665.t1 MTR_4g055990 75.964 441 64 3 1 399 1 441 0.0 632
MS.gene07665.t1 MTR_4g055580 72.279 487 59 4 1 412 92 577 0.0 631
MS.gene07665.t1 MTR_4g056040 75.291 429 76 1 1 399 1 429 0.0 628
MS.gene07665.t1 MTR_4g056070 74.371 437 72 1 1 397 1 437 0.0 627
MS.gene07665.t1 MTR_1g038710 66.821 431 127 4 1 425 11 431 0.0 528
MS.gene07665.t1 MTR_1g090883 64.589 353 121 3 2 352 12 362 2.71e-143 413
MS.gene07665.t1 MTR_7g110920 52.601 346 100 5 99 425 1 301 1.64e-104 313
MS.gene07665.t1 MTR_4g093690 56.985 272 108 6 1 268 10 276 1.59e-84 260
MS.gene07665.t1 MTR_1g090900 68.362 177 53 2 1 174 1 177 8.45e-71 222
MS.gene07665.t1 MTR_4g056020 64.286 154 17 1 297 412 1 154 3.60e-58 188
MS.gene07665.t1 MTR_4g056010 85.859 99 14 0 69 167 2 100 1.11e-52 171
MS.gene07665.t1 MTR_5g084070 33.005 406 229 17 5 399 9 382 5.86e-31 123
MS.gene07665.t1 MTR_5g080710 31.655 417 226 16 5 399 29 408 1.55e-30 122
MS.gene07665.t1 MTR_8g445780 29.340 409 240 13 7 396 11 389 5.61e-28 114
MS.gene07665.t1 MTR_7g056433 29.782 413 206 19 4 403 7 348 4.70e-27 112
MS.gene07665.t1 MTR_4g032730 30.217 460 232 22 9 414 15 439 3.44e-25 107
MS.gene07665.t1 MTR_3g108560 29.950 404 205 15 6 403 17 348 1.04e-24 105
MS.gene07665.t1 MTR_8g467800 30.714 420 252 15 5 404 16 416 1.61e-24 105
MS.gene07665.t1 MTR_8g468810 29.904 418 250 17 4 399 20 416 4.05e-23 101
MS.gene07665.t1 MTR_8g062270 30.310 419 242 19 9 399 16 412 1.10e-22 100
MS.gene07665.t1 MTR_1g041245 37.629 194 107 6 9 197 11 195 1.13e-22 99.4
MS.gene07665.t1 MTR_2g083840 29.904 418 248 18 9 404 21 415 1.72e-22 99.8
MS.gene07665.t1 MTR_8g014260 27.635 427 243 15 6 399 13 406 7.15e-22 97.8
MS.gene07665.t1 MTR_8g058970 28.378 444 253 17 4 404 14 435 1.05e-21 97.4
MS.gene07665.t1 MTR_7g098510 27.586 406 210 13 9 403 18 350 3.90e-21 95.1
MS.gene07665.t1 MTR_7g007080 28.199 422 200 20 7 403 2 345 4.37e-21 94.7
MS.gene07665.t1 MTR_8g468840 28.471 425 252 17 8 404 13 413 1.63e-20 93.6
MS.gene07665.t1 MTR_8g468810 31.268 339 196 15 4 320 20 343 2.55e-20 92.4
MS.gene07665.t1 MTR_8g468810 32.013 303 173 13 4 288 20 307 3.68e-20 91.3
MS.gene07665.t1 MTR_3g107100 27.981 411 215 15 5 403 7 348 4.37e-20 92.0
MS.gene07665.t1 MTR_8g468810 32.013 303 173 13 4 288 20 307 4.67e-20 90.9
MS.gene07665.t1 MTR_8g468810 31.803 305 175 13 4 290 20 309 8.24e-20 90.5
MS.gene07665.t1 MTR_8g467800 32.459 305 178 10 5 294 16 307 1.11e-19 90.1
MS.gene07665.t1 MTR_6g045333 27.536 414 212 17 9 403 61 405 1.40e-19 90.9
MS.gene07665.t1 MTR_7g033990 25.307 407 218 15 9 403 11 343 3.14e-19 89.7
MS.gene07665.t1 MTR_8g062310 34.450 209 120 8 9 213 25 220 6.26e-19 89.0
MS.gene07665.t1 MTR_8g014160 28.708 418 208 17 2 399 34 381 8.72e-19 88.2
MS.gene07665.t1 MTR_7g033915 26.914 405 196 14 9 403 11 325 1.70e-18 87.0
MS.gene07665.t1 MTR_3g107120 27.725 422 220 13 1 403 1 356 2.04e-18 87.0
MS.gene07665.t1 MTR_0543s0010 36.979 192 95 9 9 193 86 258 2.44e-18 87.0
MS.gene07665.t1 MTR_0492s0020 36.979 192 95 9 9 193 86 258 2.51e-18 87.0
MS.gene07665.t1 MTR_2g007500 27.342 395 199 16 9 388 14 335 3.98e-18 85.5
MS.gene07665.t1 MTR_1g053025 26.634 413 224 16 9 403 2 353 7.94e-18 85.1
MS.gene07665.t1 MTR_3g108150 28.040 403 213 16 9 403 13 346 3.44e-17 83.2
MS.gene07665.t1 MTR_3g108560 37.037 189 105 7 6 193 17 192 4.41e-17 82.0
MS.gene07665.t1 MTR_4g050250 34.434 212 106 9 9 193 21 226 4.84e-17 83.2
MS.gene07665.t1 MTR_8g062080 33.171 205 115 6 1 193 15 209 5.82e-17 83.2
MS.gene07665.t1 MTR_7g007340 27.750 400 185 14 4 393 8 313 6.48e-17 82.4
MS.gene07665.t1 MTR_2g007400 27.725 422 204 20 9 399 12 363 6.53e-17 82.4
MS.gene07665.t1 MTR_3g107160 25.424 413 230 13 2 403 3 348 8.79e-17 82.0
MS.gene07665.t1 MTR_7g098570 37.173 191 103 7 9 193 20 199 9.18e-17 82.4
MS.gene07665.t1 MTR_7g115270 35.533 197 107 8 9 193 12 200 1.08e-16 82.0
MS.gene07665.t1 MTR_8g469020 33.480 227 126 10 9 211 7 232 1.13e-16 82.0
MS.gene07665.t1 MTR_7g056447 36.323 223 116 10 1 209 1 211 1.54e-16 80.1
MS.gene07665.t1 MTR_2g036470 27.295 414 210 21 9 403 14 355 2.22e-16 80.9
MS.gene07665.t1 MTR_7g032380 33.333 189 114 6 9 193 11 191 3.49e-16 79.7
MS.gene07665.t1 MTR_1g090890 62.264 53 17 1 350 399 29 81 4.44e-16 74.3
MS.gene07665.t1 MTR_6g011460 27.737 411 202 18 9 403 46 377 6.17e-16 79.7
MS.gene07665.t1 MTR_7g034115 34.848 198 109 8 9 198 11 196 6.25e-16 79.3
MS.gene07665.t1 MTR_3g048290 27.208 419 264 14 5 399 19 420 6.52e-16 80.1
MS.gene07665.t1 MTR_3g109982 27.027 444 259 14 6 403 10 434 7.21e-16 80.5
MS.gene07665.t1 MTR_4g039440 27.114 402 219 18 9 403 34 368 9.75e-16 79.0
MS.gene07665.t1 MTR_1g013560 25.176 425 252 13 1 399 11 395 1.03e-15 79.3
MS.gene07665.t1 MTR_8g062010 35.149 202 109 8 1 191 1 191 1.28e-15 79.0
MS.gene07665.t1 MTR_5g039950 28.084 381 214 15 9 378 23 354 1.40e-15 78.6
MS.gene07665.t1 MTR_8g058965 29.009 424 259 17 9 407 13 419 1.57e-15 78.6
MS.gene07665.t1 MTR_3g082890 26.225 408 228 13 6 399 94 442 1.90e-15 78.6
MS.gene07665.t1 MTR_3g071850 24.877 406 233 11 9 403 24 368 2.14e-15 79.0
MS.gene07665.t1 MTR_3g036250 26.161 409 202 15 6 399 2 325 5.39e-15 76.3
MS.gene07665.t1 MTR_8g085430 32.673 202 105 6 9 193 11 198 5.66e-15 75.9
MS.gene07665.t1 MTR_0009s0080 25.926 405 223 17 11 403 20 359 5.67e-15 76.6
MS.gene07665.t1 MTR_7g060470 26.161 409 228 16 9 403 3 351 7.06e-15 76.3
MS.gene07665.t1 MTR_1g013560 33.005 203 115 6 5 195 15 208 8.31e-15 75.9
MS.gene07665.t1 MTR_5g045510 35.233 193 104 11 9 193 12 191 9.75e-15 75.9
MS.gene07665.t1 MTR_8g070950 34.518 197 109 8 6 193 12 197 1.04e-14 76.3
MS.gene07665.t1 MTR_5g073420 31.500 200 107 7 9 193 11 195 1.44e-14 75.1
MS.gene07665.t1 MTR_5g007410 25.428 409 220 18 11 403 28 367 1.45e-14 75.5
MS.gene07665.t1 MTR_7g056287 25.000 408 214 15 9 403 3 331 1.81e-14 74.7
MS.gene07665.t1 MTR_8g468760 31.399 293 161 13 1 270 1 276 2.02e-14 75.1
MS.gene07665.t1 MTR_1g108820 26.471 408 216 17 9 403 8 344 2.08e-14 74.7
MS.gene07665.t1 MTR_3g023630 24.878 410 213 16 9 403 8 337 2.25e-14 74.7
MS.gene07665.t1 MTR_3g087260 28.472 432 245 17 9 403 12 416 3.26e-14 74.7
MS.gene07665.t1 MTR_7g034110 30.851 188 122 4 9 193 11 193 3.44e-14 73.9
MS.gene07665.t1 MTR_7g055943 27.033 418 217 19 3 403 34 380 4.04e-14 74.3
MS.gene07665.t1 MTR_1g115245 32.544 169 104 3 4 164 21 187 5.79e-14 72.8
MS.gene07665.t1 MTR_7g021630 28.150 373 196 19 6 342 14 350 1.07e-13 72.4
MS.gene07665.t1 MTR_7g056277 24.816 407 216 15 9 403 259 587 1.09e-13 73.6
MS.gene07665.t1 MTR_7g021630 28.150 373 196 19 6 342 14 350 1.12e-13 72.4
MS.gene07665.t1 MTR_2g091145 26.303 422 242 17 5 399 17 396 1.38e-13 72.8
MS.gene07665.t1 MTR_1g108820 34.536 194 101 9 9 193 8 184 1.42e-13 72.0
MS.gene07665.t1 MTR_7g033945 35.882 170 91 6 9 166 11 174 1.95e-13 68.9
MS.gene07665.t1 MTR_2g094750 27.681 401 224 20 11 361 92 476 2.35e-13 72.0
MS.gene07665.t1 MTR_6g022360 32.828 198 103 7 3 193 37 211 2.84e-13 71.6
MS.gene07665.t1 MTR_1g066830 32.812 192 111 8 9 193 8 188 2.87e-13 71.2
MS.gene07665.t1 MTR_7g026500 27.163 416 211 20 8 403 13 356 3.20e-13 71.2
MS.gene07665.t1 MTR_2g008320 26.108 406 215 16 9 399 52 387 5.08e-13 70.9
MS.gene07665.t1 MTR_4g050930 28.739 341 193 13 7 322 27 342 5.56e-13 70.5
MS.gene07665.t1 MTR_4g080787 27.191 445 226 22 9 399 19 419 5.70e-13 70.9
MS.gene07665.t1 MTR_2g005990 31.250 208 115 8 9 197 6 204 7.45e-13 70.1
MS.gene07665.t1 MTR_5g045170 29.717 212 88 7 11 193 16 195 7.69e-13 70.1
MS.gene07665.t1 MTR_4g050930 28.739 341 193 13 7 322 27 342 8.27e-13 70.5
MS.gene07665.t1 MTR_8g467790 35.122 205 98 10 9 193 148 337 9.18e-13 70.5
MS.gene07665.t1 MTR_4g080773 28.271 428 246 21 9 399 19 422 1.06e-12 70.1
MS.gene07665.t1 MTR_4g080773 28.271 428 246 21 9 399 19 422 1.10e-12 70.1
MS.gene07665.t1 MTR_5g061680 33.333 201 108 8 9 197 11 197 1.86e-12 68.6
MS.gene07665.t1 MTR_3g040700 30.366 191 119 6 9 193 43 225 2.66e-12 68.6
MS.gene07665.t1 MTR_1g021820 36.806 144 82 4 4 139 23 165 3.00e-12 68.6
MS.gene07665.t1 MTR_8g077460 32.407 216 113 7 4 198 5 208 4.06e-12 67.8
MS.gene07665.t1 MTR_4g047950 28.617 311 188 13 5 298 9 302 5.41e-12 67.4
MS.gene07665.t1 MTR_5g092960 27.928 444 243 23 5 404 15 425 6.04e-12 67.8
MS.gene07665.t1 MTR_1g085120 32.642 193 111 8 9 193 179 360 6.43e-12 67.4
MS.gene07665.t1 MTR_8g017280 31.690 284 168 12 8 278 35 305 6.52e-12 67.4
MS.gene07665.t1 MTR_5g021550 34.667 150 79 5 5 137 15 162 7.84e-12 63.5
MS.gene07665.t1 MTR_1g085120 32.642 193 111 8 9 193 167 348 7.88e-12 67.4
MS.gene07665.t1 MTR_2g047858 33.796 216 106 9 5 200 111 309 9.89e-12 67.0
MS.gene07665.t1 MTR_1g085120 32.642 193 111 8 9 193 92 273 1.28e-11 66.6
MS.gene07665.t1 MTR_8g017280 31.461 267 147 12 7 259 34 278 1.67e-11 65.1
MS.gene07665.t1 MTR_2g047848 25.653 421 249 19 4 399 2 383 1.82e-11 65.9
MS.gene07665.t1 MTR_4g134150 29.032 186 120 4 8 193 13 186 2.43e-11 63.9
MS.gene07665.t1 MTR_5g040850 25.060 419 247 13 4 399 2 376 3.00e-11 65.5
MS.gene07665.t1 MTR_3g110010 32.461 191 119 5 4 193 8 189 3.66e-11 65.5
MS.gene07665.t1 MTR_7g110910 81.579 38 7 0 1 38 158 195 4.36e-11 62.4
MS.gene07665.t1 MTR_4g050940 29.794 339 198 13 9 326 67 386 7.88e-11 64.3
MS.gene07665.t1 MTR_1g107385 33.981 206 108 8 9 193 32 230 8.33e-11 63.9
MS.gene07665.t1 MTR_3g082890 23.608 449 225 14 6 399 14 399 9.55e-11 63.9
MS.gene07665.t1 MTR_1g021825 29.851 201 120 6 4 195 83 271 9.86e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07665.t1 AT4G14103 31.398 379 209 14 8 356 7 364 1.30e-30 121
MS.gene07665.t1 AT4G14103 31.398 379 209 14 8 356 7 364 1.30e-30 121
MS.gene07665.t1 AT4G14103 31.622 370 202 14 8 347 7 355 4.80e-30 121
MS.gene07665.t1 AT4G10400 29.426 418 259 12 9 421 2 388 4.94e-30 120
MS.gene07665.t1 AT4G10400 29.426 418 259 12 9 421 2 388 4.94e-30 120
MS.gene07665.t1 AT4G10400 29.426 418 259 12 9 421 2 388 4.94e-30 120
MS.gene07665.t1 AT4G00315 29.882 425 242 18 9 403 2 400 2.83e-28 116
MS.gene07665.t1 AT4G14096 30.914 372 201 14 8 350 7 351 6.62e-28 115
MS.gene07665.t1 AT4G14096 30.914 372 201 14 8 350 7 351 6.62e-28 115
MS.gene07665.t1 AT3G59190 30.423 378 205 12 9 347 12 370 2.44e-26 110
MS.gene07665.t1 AT3G59190 30.343 379 206 12 9 348 12 371 4.00e-26 110
MS.gene07665.t1 AT3G50710 28.605 430 256 15 9 418 2 400 9.15e-26 108
MS.gene07665.t1 AT4G22280 31.496 381 210 13 9 368 2 352 2.35e-25 107
MS.gene07665.t1 AT1G55660 28.806 427 244 21 9 403 53 451 2.85e-25 108
MS.gene07665.t1 AT2G26860 30.597 402 249 14 9 399 2 384 3.37e-25 107
MS.gene07665.t1 AT2G26860 30.597 402 249 14 9 399 2 384 3.37e-25 107
MS.gene07665.t1 AT5G41830 26.509 464 270 16 3 417 7 448 5.45e-25 107
MS.gene07665.t1 AT4G26340 28.030 396 258 13 9 399 2 375 5.56e-25 106
MS.gene07665.t1 AT5G60610 29.136 405 241 16 9 399 2 374 7.85e-25 105
MS.gene07665.t1 AT5G60610 29.136 405 241 16 9 399 2 374 7.85e-25 105
MS.gene07665.t1 AT5G62970 28.472 432 239 14 9 399 2 404 1.05e-24 105
MS.gene07665.t1 AT3G03030 28.723 376 219 10 9 348 2 364 1.36e-24 105
MS.gene07665.t1 AT4G22280 31.944 360 194 13 9 347 2 331 3.36e-24 102
MS.gene07665.t1 AT5G38396 30.423 378 205 13 9 348 2 359 3.45e-24 104
MS.gene07665.t1 AT4G00320 28.392 398 229 13 3 361 7 387 6.30e-24 104
MS.gene07665.t1 AT1G51370 29.024 410 248 14 7 403 17 396 1.25e-23 102
MS.gene07665.t1 AT5G41840 28.941 387 214 12 9 348 14 386 8.83e-23 101
MS.gene07665.t1 AT5G56380 28.162 419 246 16 9 399 2 393 1.15e-22 100
MS.gene07665.t1 AT5G56380 28.162 419 246 16 9 399 2 393 1.15e-22 100
MS.gene07665.t1 AT3G58860 28.852 357 217 11 6 344 4 341 1.82e-22 99.8
MS.gene07665.t1 AT5G56440 27.674 430 258 14 9 415 2 401 2.14e-22 99.0
MS.gene07665.t1 AT5G38590 28.070 399 250 12 9 399 2 371 3.06e-22 98.6
MS.gene07665.t1 AT1G51370 29.167 384 230 13 7 378 17 370 9.80e-22 97.1
MS.gene07665.t1 AT1G55660 30.547 311 166 14 9 290 53 342 1.03e-21 96.3
MS.gene07665.t1 AT3G59250 28.049 410 235 13 9 405 7 369 1.19e-21 97.1
MS.gene07665.t1 AT3G59160 27.139 409 225 13 9 360 13 405 1.33e-21 97.1
MS.gene07665.t1 AT5G22700 29.358 436 227 21 9 404 6 400 1.73e-21 96.7
MS.gene07665.t1 AT5G22700 29.358 436 227 21 9 404 6 400 1.73e-21 96.7
MS.gene07665.t1 AT5G22700 29.358 436 227 21 9 404 6 400 1.73e-21 96.7
MS.gene07665.t1 AT5G22700 29.358 436 227 21 9 404 6 400 1.73e-21 96.7
MS.gene07665.t1 AT1G58310 28.205 390 213 10 8 348 7 378 1.86e-21 97.1
MS.gene07665.t1 AT1G78750 29.412 391 224 15 2 361 11 380 1.90e-21 96.7
MS.gene07665.t1 AT1G78750 29.412 391 224 15 2 361 11 380 1.90e-21 96.7
MS.gene07665.t1 AT3G59200 28.744 414 228 16 8 379 6 394 3.03e-21 96.3
MS.gene07665.t1 AT4G13960 28.457 376 208 11 9 348 2 352 3.50e-21 95.9
MS.gene07665.t1 AT4G13960 28.457 376 208 11 9 348 2 352 3.50e-21 95.9
MS.gene07665.t1 AT5G22700 29.358 436 227 21 9 404 43 437 3.57e-21 95.9
MS.gene07665.t1 AT3G59210 28.153 444 273 14 5 419 3 429 5.24e-21 95.5
MS.gene07665.t1 AT3G59210 28.153 444 273 14 5 419 3 429 5.24e-21 95.5
MS.gene07665.t1 AT3G59210 28.153 444 273 14 5 419 3 429 5.24e-21 95.5
MS.gene07665.t1 AT3G59210 28.153 444 273 14 5 419 3 429 5.24e-21 95.5
MS.gene07665.t1 AT3G59210 28.153 444 273 14 5 419 3 429 5.24e-21 95.5
MS.gene07665.t1 AT1G69630 30.270 370 218 14 2 348 11 363 5.51e-21 95.1
MS.gene07665.t1 AT3G59230 27.907 387 211 11 9 348 12 377 5.56e-21 95.5
MS.gene07665.t1 AT5G56420 28.642 405 244 18 8 399 5 377 7.61e-21 94.4
MS.gene07665.t1 AT5G56420 28.642 405 244 18 8 399 5 377 7.61e-21 94.4
MS.gene07665.t1 AT5G56420 28.642 405 244 18 8 399 5 377 7.61e-21 94.4
MS.gene07665.t1 AT1G51370 37.113 194 106 6 7 198 17 196 9.70e-21 93.2
MS.gene07665.t1 AT3G03030 29.630 324 183 9 9 296 2 316 1.10e-20 92.8
MS.gene07665.t1 AT3G59200 28.796 382 207 14 8 347 6 364 1.25e-20 93.2
MS.gene07665.t1 AT3G03040 27.763 371 224 9 9 348 2 359 1.35e-20 94.4
MS.gene07665.t1 AT1G78760 30.048 416 210 19 7 387 14 383 2.23e-20 93.2
MS.gene07665.t1 AT3G59170 29.398 415 227 13 9 368 7 410 2.24e-20 93.6
MS.gene07665.t1 AT3G58960 28.385 384 209 14 9 353 2 358 3.43e-20 92.8
MS.gene07665.t1 AT2G26030 28.333 420 255 17 9 404 4 401 4.14e-20 92.4
MS.gene07665.t1 AT2G26030 28.333 420 255 17 9 404 4 401 4.14e-20 92.4
MS.gene07665.t1 AT3G52680 29.008 393 222 13 9 381 21 376 7.21e-20 92.0
MS.gene07665.t1 AT3G58880 29.380 371 215 12 9 350 3 355 1.00e-19 91.3
MS.gene07665.t1 AT5G38386 25.989 354 193 12 9 348 2 300 1.11e-19 90.9
MS.gene07665.t1 AT5G38386 25.989 354 193 12 9 348 2 300 1.11e-19 90.9
MS.gene07665.t1 AT2G26030 27.830 424 257 18 9 404 4 406 1.13e-19 91.3
MS.gene07665.t1 AT1G06630 29.330 358 219 12 8 347 11 352 1.56e-19 89.7
MS.gene07665.t1 AT1G06630 29.330 358 219 12 8 347 11 352 1.56e-19 89.7
MS.gene07665.t1 AT1G06630 29.330 358 219 12 8 347 20 361 1.99e-19 90.1
MS.gene07665.t1 AT1G06630 29.330 358 219 12 8 347 11 352 2.06e-19 90.1
MS.gene07665.t1 AT1G06630 29.330 358 219 12 8 347 11 352 2.06e-19 90.1
MS.gene07665.t1 AT1G06630 29.330 358 219 12 8 347 11 352 2.06e-19 90.1
MS.gene07665.t1 AT1G06630 29.330 358 219 12 8 347 11 352 2.06e-19 90.1
MS.gene07665.t1 AT5G56370 30.075 399 239 17 9 399 2 368 2.11e-19 90.1
MS.gene07665.t1 AT5G56370 30.075 399 239 17 9 399 2 368 2.11e-19 90.1
MS.gene07665.t1 AT5G56410 28.037 428 252 19 9 405 2 404 2.14e-19 90.9
MS.gene07665.t1 AT4G26350 25.118 422 254 14 9 403 2 388 2.24e-19 90.1
MS.gene07665.t1 AT3G62440 27.806 392 226 17 9 361 2 375 3.38e-19 89.7
MS.gene07665.t1 AT1G06630 29.330 358 219 12 8 347 11 352 4.88e-19 89.4
MS.gene07665.t1 AT3G58900 29.058 382 206 13 9 348 2 360 4.94e-19 89.4
MS.gene07665.t1 AT5G44490 29.117 419 224 21 4 387 12 392 6.07e-19 89.0
MS.gene07665.t1 AT4G09920 29.866 298 180 12 9 295 2 281 9.81e-19 87.0
MS.gene07665.t1 AT4G09920 29.866 298 180 12 9 295 2 281 9.81e-19 87.0
MS.gene07665.t1 AT5G44490 29.117 419 224 21 4 387 12 392 1.01e-18 88.6
MS.gene07665.t1 AT5G53840 27.644 416 249 14 7 403 16 398 1.21e-18 88.2
MS.gene07665.t1 AT4G09920 29.966 297 179 12 9 294 2 280 1.88e-18 85.9
MS.gene07665.t1 AT4G09920 29.966 297 179 12 9 294 2 280 1.88e-18 85.9
MS.gene07665.t1 AT4G09920 29.966 297 179 12 9 294 2 280 1.88e-18 85.9
MS.gene07665.t1 AT1G66300 29.839 372 211 16 4 348 24 372 2.34e-18 87.4
MS.gene07665.t1 AT1G52650 28.232 379 206 16 9 348 2 353 2.79e-18 87.0
MS.gene07665.t1 AT3G58920 28.093 388 223 16 9 355 2 374 3.65e-18 86.7
MS.gene07665.t1 AT1G16930 30.328 366 203 15 9 347 15 355 4.88e-18 86.3
MS.gene07665.t1 AT1G16930 30.328 366 203 15 9 347 15 355 4.88e-18 86.3
MS.gene07665.t1 AT1G16930 30.328 366 203 15 9 347 15 355 4.88e-18 86.3
MS.gene07665.t1 AT3G59240 28.492 358 227 10 9 348 8 354 5.02e-18 86.7
MS.gene07665.t1 AT5G53635 28.125 416 218 21 11 387 2 375 6.03e-18 85.9
MS.gene07665.t1 AT5G38570 26.683 401 221 14 9 403 2 335 6.16e-18 85.5
MS.gene07665.t1 AT4G00160 28.756 386 234 12 9 381 16 373 6.43e-18 85.9
MS.gene07665.t1 AT1G66290 28.671 429 238 19 4 403 24 413 8.69e-18 85.5
MS.gene07665.t1 AT3G58940 27.222 360 220 11 9 348 2 339 9.21e-18 85.9
MS.gene07665.t1 AT3G58940 27.222 360 220 11 9 348 2 339 9.21e-18 85.9
MS.gene07665.t1 AT2G42720 29.288 379 197 17 9 348 2 348 9.34e-18 85.5
MS.gene07665.t1 AT1G55030 27.404 416 262 15 9 414 19 404 9.42e-18 85.5
MS.gene07665.t1 AT1G55030 27.404 416 262 15 9 414 9 394 1.20e-17 85.1
MS.gene07665.t1 AT5G56370 31.792 346 196 17 9 346 2 315 1.36e-17 83.6
MS.gene07665.t1 AT1G13780 26.895 409 246 16 9 386 10 396 1.43e-17 85.1
MS.gene07665.t1 AT5G38590 31.154 260 165 8 9 264 2 251 1.50e-17 83.2
MS.gene07665.t1 AT5G25860 29.539 369 218 15 9 348 12 367 1.72e-17 84.7
MS.gene07665.t1 AT2G04230 27.708 397 245 14 8 387 12 383 1.72e-17 84.7
MS.gene07665.t1 AT3G58930 26.804 388 217 12 9 348 2 370 1.81e-17 84.7
MS.gene07665.t1 AT3G58930 26.804 388 217 12 9 348 2 370 1.81e-17 84.7
MS.gene07665.t1 AT3G58930 26.804 388 217 12 9 348 2 370 1.81e-17 84.7
MS.gene07665.t1 AT5G56820 27.206 408 246 15 9 405 15 382 2.62e-17 84.0
MS.gene07665.t1 AT4G15060 29.677 310 171 13 6 290 23 310 4.18e-17 83.2
MS.gene07665.t1 AT3G42770 32.051 312 157 14 14 294 4 291 4.18e-17 84.0
MS.gene07665.t1 AT1G66310 30.053 376 222 15 4 359 14 368 5.23e-17 83.2
MS.gene07665.t1 AT5G22670 27.635 427 244 18 8 403 10 402 7.30e-17 82.8
MS.gene07665.t1 AT3G44060 30.000 370 215 19 14 360 4 352 1.12e-16 82.0
MS.gene07665.t1 AT5G38390 27.704 379 202 16 9 348 2 347 1.23e-16 82.0
MS.gene07665.t1 AT4G13965 29.095 409 241 19 9 403 10 383 1.35e-16 81.6
MS.gene07665.t1 AT4G15060 29.167 336 193 13 6 314 169 486 1.45e-16 82.0
MS.gene07665.t1 AT3G59000 26.260 377 224 10 9 348 2 361 1.50e-16 82.0
MS.gene07665.t1 AT1G05080 29.056 413 252 15 8 403 12 400 1.53e-16 81.6
MS.gene07665.t1 AT5G44950 28.922 408 233 18 8 389 3 379 2.00e-16 81.3
MS.gene07665.t1 AT5G22660 26.799 403 241 15 8 384 12 386 2.66e-16 80.9
MS.gene07665.t1 AT3G52680 29.050 358 198 12 9 346 21 342 2.84e-16 80.5
MS.gene07665.t1 AT5G25850 36.126 191 100 8 9 193 20 194 3.02e-16 80.9
MS.gene07665.t1 AT5G22700 28.605 423 206 20 9 404 43 396 3.19e-16 80.9
MS.gene07665.t1 AT3G58900 29.358 327 180 11 9 298 2 314 4.65e-16 79.0
MS.gene07665.t1 AT5G41630 27.166 427 232 15 8 377 11 415 5.31e-16 80.1
MS.gene07665.t1 AT5G38392 35.577 208 108 8 9 199 2 200 6.15e-16 77.0
MS.gene07665.t1 AT5G56690 29.668 391 231 16 11 382 4 369 7.31e-16 79.3
MS.gene07665.t1 AT3G58900 29.231 325 179 11 9 296 2 312 1.12e-15 78.2
MS.gene07665.t1 AT3G58900 29.231 325 179 11 9 296 2 312 1.12e-15 78.2
MS.gene07665.t1 AT3G26930 28.325 406 245 17 8 399 20 393 1.28e-15 79.0
MS.gene07665.t1 AT5G22610 27.626 438 248 17 8 404 17 426 1.43e-15 79.0
MS.gene07665.t1 AT5G18780 28.708 418 249 17 8 403 10 400 1.44e-15 79.0
MS.gene07665.t1 AT5G18780 28.708 418 249 17 8 403 10 400 1.44e-15 79.0
MS.gene07665.t1 AT1G13780 28.391 317 184 13 9 294 10 314 2.74e-15 77.0
MS.gene07665.t1 AT3G26922 31.469 286 181 10 8 290 13 286 1.19e-14 74.7
MS.gene07665.t1 AT3G26922 31.469 286 181 10 8 290 13 286 1.19e-14 74.7
MS.gene07665.t1 AT3G49030 27.595 395 240 14 7 387 19 381 1.31e-14 75.9
MS.gene07665.t1 AT5G22610 27.446 419 243 16 8 404 17 396 1.40e-14 75.9
MS.gene07665.t1 AT3G59180 28.618 304 176 11 69 348 41 327 1.89e-14 75.5
MS.gene07665.t1 AT3G58980 26.064 376 235 12 9 356 2 362 2.41e-14 75.5
MS.gene07665.t1 AT4G13985 27.419 372 231 13 4 350 14 371 2.90e-14 74.7
MS.gene07665.t1 AT1G32375 25.980 408 254 16 9 399 2 378 3.10e-14 74.7
MS.gene07665.t1 AT1G32375 25.980 408 254 16 9 399 2 378 3.10e-14 74.7
MS.gene07665.t1 AT4G10420 27.707 314 187 11 99 403 1 283 3.17e-14 73.6
MS.gene07665.t1 AT3G59000 30.698 215 122 8 9 197 2 215 4.17e-14 73.6
MS.gene07665.t1 AT5G53640 32.105 190 113 7 7 193 20 196 5.35e-14 71.6
MS.gene07665.t1 AT3G51530 27.320 388 228 15 9 376 30 383 6.26e-14 73.9
MS.gene07665.t1 AT5G18780 28.969 359 212 14 9 346 11 347 7.66e-14 73.2
MS.gene07665.t1 AT5G18780 28.969 359 212 14 9 346 11 347 7.66e-14 73.2
MS.gene07665.t1 AT5G56810 28.469 418 238 19 9 403 15 394 1.25e-13 72.8
MS.gene07665.t1 AT5G35995 27.321 377 202 18 8 348 4 344 1.38e-13 72.8
MS.gene07665.t1 AT5G35995 27.321 377 202 18 8 348 4 344 1.38e-13 72.8
MS.gene07665.t1 AT5G22730 26.066 422 264 15 8 403 27 426 1.70e-13 72.4
MS.gene07665.t1 AT5G22730 26.066 422 264 15 8 403 27 426 1.70e-13 72.4
MS.gene07665.t1 AT3G56780 24.444 450 248 15 11 399 9 427 1.82e-13 72.4
MS.gene07665.t1 AT5G18770 26.988 415 265 16 9 403 24 420 2.21e-13 72.0
MS.gene07665.t1 AT1G48400 25.369 406 223 15 8 355 9 392 2.34e-13 72.0
MS.gene07665.t1 AT1G16940 26.050 357 209 14 8 346 10 329 2.72e-13 71.6
MS.gene07665.t1 AT3G26930 27.249 378 229 17 36 399 3 348 4.61e-13 70.9
MS.gene07665.t1 AT1G06630 28.525 305 185 11 8 294 11 300 5.96e-13 69.7
MS.gene07665.t1 AT5G27750 25.917 436 248 19 9 398 5 411 7.64e-13 70.5
MS.gene07665.t1 AT5G22660 27.950 322 184 13 2 295 6 307 9.33e-13 69.3
MS.gene07665.t1 AT5G56390 25.990 404 261 14 9 399 2 380 1.02e-12 70.1
MS.gene07665.t1 AT3G56780 24.771 436 236 15 11 385 9 413 1.13e-12 69.7
MS.gene07665.t1 AT5G18770 26.912 353 225 13 9 342 24 362 1.89e-12 68.9
MS.gene07665.t1 AT5G56700 29.814 322 180 13 93 399 48 338 2.69e-12 68.2
MS.gene07665.t1 AT5G22720 27.083 432 238 19 4 399 18 408 3.03e-12 68.6
MS.gene07665.t1 AT3G54910 26.140 329 211 11 79 404 36 335 3.78e-12 67.8
MS.gene07665.t1 AT3G54910 26.140 329 211 11 79 404 36 335 3.78e-12 67.8
MS.gene07665.t1 AT3G54910 26.140 329 211 11 79 404 36 335 3.78e-12 67.8
MS.gene07665.t1 AT5G22730 30.808 198 120 6 8 199 27 213 5.62e-12 67.4
MS.gene07665.t1 AT5G27750 26.702 382 214 16 9 346 5 364 6.18e-12 67.4
MS.gene07665.t1 AT1G19070 62.222 45 17 0 9 53 2 46 1.03e-11 61.2
MS.gene07665.t1 AT3G49150 24.876 402 258 12 7 381 14 398 1.43e-11 66.6
MS.gene07665.t1 AT5G38590 32.836 134 88 2 9 140 2 135 2.36e-11 64.7
MS.gene07665.t1 AT3G58930 24.734 376 206 10 9 348 2 336 2.56e-11 65.9
MS.gene07665.t1 AT3G58930 24.734 376 206 10 9 348 2 336 2.56e-11 65.9
MS.gene07665.t1 AT3G14710 27.184 412 255 15 3 399 20 401 2.57e-11 65.5
MS.gene07665.t1 AT1G19410 27.711 415 217 17 15 386 6 380 9.02e-11 63.9
MS.gene07665.t1 AT2G29910 29.630 189 123 5 8 195 4 183 9.34e-11 63.2
MS.gene07665.t1 AT2G29910 29.630 189 123 5 8 195 4 183 9.34e-11 63.2

Find 77 sgRNAs with CRISPR-Local

Find 126 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGACTTAAATTTATTTAT+TGG 0.117769 4.1:-42445717 None:intergenic
ATTTACAAATTTGATTTCTT+TGG 0.216730 4.1:-42443787 None:intergenic
TCACAATTTATTATCTTTAT+CGG 0.257922 4.1:+42444628 MS.gene07665:CDS
ATGACTTAAATTTATTTATT+GGG 0.271672 4.1:-42445716 None:intergenic
CTCATTACATTTGAATTTGT+TGG 0.272022 4.1:+42445109 MS.gene07665:CDS
ACATGTTCTATAGGACTCTT+TGG 0.280320 4.1:-42443679 None:intergenic
ATTGCAAGATCCTTAAGTTT+TGG 0.305825 4.1:-42444707 None:intergenic
AGTTTCCAACCTCCTTTCTT+CGG 0.314970 4.1:-42445039 None:intergenic
TCTATCTGGTTGTCCACATT+TGG 0.320155 4.1:+42444145 MS.gene07665:CDS
TAATTCAATTGAAGATCATT+TGG 0.321337 4.1:+42445649 MS.gene07665:CDS
GTCTTTGTTATGCAGTTTCT+CGG 0.330203 4.1:+42444566 MS.gene07665:intron
GTTTCCAACCTCCTTTCTTC+GGG 0.346723 4.1:-42445038 None:intergenic
CACTCGTGGTCTTAAAATTA+CGG 0.360836 4.1:+42443994 MS.gene07665:CDS
GATCTCAATAAGTTTCTATC+TGG 0.393120 4.1:+42444131 MS.gene07665:CDS
GAGATCTTCAATACCCTTGA+AGG 0.396272 4.1:-42445675 None:intergenic
ACTTTCTAATGTCAAATCAT+TGG 0.400805 4.1:+42444439 MS.gene07665:CDS
TGACATTAGAAAGTCCCTTC+AGG 0.408452 4.1:-42444430 None:intergenic
AATAGCAGCTTCATCAAGAT+TGG 0.411607 4.1:-42444366 None:intergenic
ACTTAAGGATCTTGCAATTG+AGG 0.413085 4.1:+42444712 MS.gene07665:CDS
AAAGTGAAGGTTGGGAATCT+TGG 0.417455 4.1:-42443733 None:intergenic
ACAGATCCAAGTCAAGTTCC+TGG 0.422138 4.1:-42443923 None:intergenic
ACTCGTGGTCTTAAAATTAC+GGG 0.427699 4.1:+42443995 MS.gene07665:CDS
ATCTGGTTGTCCACATTTGG+AGG 0.433975 4.1:+42444148 MS.gene07665:CDS
GGTAATTGAAAGTGAAGGTT+GGG 0.443422 4.1:-42443741 None:intergenic
ACACAATGCACCAAAACTTA+AGG 0.445433 4.1:+42444697 MS.gene07665:CDS
CTAAGTCTTGATAGTGAGAA+TGG 0.446214 4.1:+42443846 MS.gene07665:CDS
TATAGGACTCTTTGGTTGGT+AGG 0.450093 4.1:-42443671 None:intergenic
CAAGGTCCAGGAACTTGACT+TGG 0.457085 4.1:+42443917 MS.gene07665:CDS
AAGTGAAAAGAGGTGTTGAT+AGG 0.462824 4.1:-42444200 None:intergenic
GGATAGAACACATGTTCTAT+AGG 0.464515 4.1:-42443688 None:intergenic
TACAAATTGTTAAAATCCGC+AGG 0.464746 4.1:-42444401 None:intergenic
GAGAAAGATCTTCAAGTGAC+GGG 0.472802 4.1:-42444295 None:intergenic
TGAAATCAATTCCCGAAGAA+AGG 0.482837 4.1:+42445027 MS.gene07665:CDS
AGATCATTTGGATGCCTTCA+AGG 0.486402 4.1:+42445661 MS.gene07665:CDS
GGCATTAGATCTCAAGGTCC+AGG 0.496808 4.1:+42443905 MS.gene07665:CDS
GGAGGTTGGAAACTCGAGTT+GGG 0.509671 4.1:+42445048 MS.gene07665:CDS
AACACAGGATCTGAATTCTC+TGG 0.517329 4.1:-42443762 None:intergenic
GTTCTATAGGACTCTTTGGT+TGG 0.518746 4.1:-42443675 None:intergenic
TGTTATGCAGTTTCTCGGCA+TGG 0.521848 4.1:+42444571 MS.gene07665:intron
TAACACTTAATAACAGAAGT+AGG 0.522805 4.1:-42444254 None:intergenic
TGTACACATGTGGGTTTCAA+AGG 0.528762 4.1:+42443884 MS.gene07665:CDS
CATGTGTTCTATCCACAAGA+TGG 0.542093 4.1:+42443697 MS.gene07665:CDS
TTCAAAGGCATTAGATCTCA+AGG 0.542872 4.1:+42443899 MS.gene07665:CDS
GATCATTTGGATGCCTTCAA+GGG 0.544625 4.1:+42445662 MS.gene07665:CDS
GGTGGAGCCATTGATATCTC+CGG 0.546718 4.1:+42445069 MS.gene07665:CDS
AAATTCAAATGTAATGAGAC+TGG 0.547394 4.1:-42445104 None:intergenic
GACGGGGCATTAATTTGTAG+TGG 0.550813 4.1:-42444278 None:intergenic
TGGTAATTGAAAGTGAAGGT+TGG 0.551378 4.1:-42443742 None:intergenic
CAATTTGTATACAGTCCTGA+AGG 0.553354 4.1:+42444415 MS.gene07665:CDS
TTGATTTCTTTGGATAACAC+AGG 0.555824 4.1:-42443777 None:intergenic
AGGAGGTTGGAAACTCGAGT+TGG 0.571978 4.1:+42445047 MS.gene07665:CDS
GCAGATCGACTCCCATCTTG+TGG 0.572297 4.1:-42443709 None:intergenic
ATGTGTTCTATCCACAAGAT+GGG 0.579779 4.1:+42443698 MS.gene07665:CDS
AGACTGGTTGTAAGACATGC+CGG 0.580136 4.1:-42445088 None:intergenic
TTCCATGTGTGAGTCACTCG+TGG 0.584920 4.1:+42443980 MS.gene07665:CDS
AGAGAAAGATCTTCAAGTGA+CGG 0.585255 4.1:-42444296 None:intergenic
AGACATGCCGGAGATATCAA+TGG 0.591239 4.1:-42445076 None:intergenic
AATTCCCGAAGAAAGGAGGT+TGG 0.591474 4.1:+42445034 MS.gene07665:CDS
AAATATCTGAGAAATGCAGT+TGG 0.592480 4.1:+42444654 MS.gene07665:CDS
AATCAATTCCCGAAGAAAGG+AGG 0.619715 4.1:+42445030 MS.gene07665:CDS
GGTTGGAAACTCGAGTTGGG+TGG 0.621687 4.1:+42445051 MS.gene07665:CDS
TCTTCATCTCCATGAAAATG+TGG 0.630405 4.1:+42444076 MS.gene07665:CDS
ACCACATGATGTACACATGT+GGG 0.639358 4.1:+42443875 MS.gene07665:CDS
AATTTGTATACAGTCCTGAA+GGG 0.640048 4.1:+42444416 MS.gene07665:CDS
GACCACGAGTGACTCACACA+TGG 0.648921 4.1:-42443982 None:intergenic
TGAAAAGAAGACTTGAGTGT+TGG 0.649400 4.1:-42444029 None:intergenic
AAGTAGGCATATATAAACAA+AGG 0.650404 4.1:-42444238 None:intergenic
CTCGTGGTCTTAAAATTACG+GGG 0.655217 4.1:+42443996 MS.gene07665:CDS
AACCACATGATGTACACATG+TGG 0.655277 4.1:+42443874 MS.gene07665:CDS
TCTCTGGTAATTGAAAGTGA+AGG 0.665693 4.1:-42443746 None:intergenic
GGTGTTGATAGGTAATGCAA+AGG 0.665875 4.1:-42444189 None:intergenic
AGATGAAGAATCTTTAGTGA+CGG 0.666233 4.1:-42444062 None:intergenic
ACCCACATGTGTACATCATG+TGG 0.680811 4.1:-42443876 None:intergenic
AGAAAGATCTTCAAGTGACG+GGG 0.690406 4.1:-42444294 None:intergenic
ACATGTGTACATCATGTGGT+TGG 0.696793 4.1:-42443872 None:intergenic
TCACACATGGAAAGCCTAAG+CGG 0.698789 4.1:-42443969 None:intergenic
TATGCAGTTTCTCGGCATGG+AGG 0.704407 4.1:+42444574 MS.gene07665:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATATATTAATTTTTTTAT+CGG + chr4.1:42445555-42445574 MS.gene07665:intron 0.0%
!!! AAAATTCTAATGATAATTTT+TGG + chr4.1:42444985-42445004 MS.gene07665:intron 10.0%
!! ATGAAACTTGTAATTAAAAA+AGG - chr4.1:42444508-42444527 None:intergenic 15.0%
!! TCACAATTTATTATCTTTAT+CGG + chr4.1:42444628-42444647 MS.gene07665:CDS 15.0%
!!! ACTTAGTTTTCTTATATTTT+CGG - chr4.1:42443832-42443851 None:intergenic 15.0%
!!! ATTTACAAATTTGATTTCTT+TGG - chr4.1:42443790-42443809 None:intergenic 15.0%
!!! TTGCACAATTTTTTTTTTAA+AGG + chr4.1:42444759-42444778 MS.gene07665:intron 15.0%
!! AAGTAAAATAGTTTGAAAGA+AGG - chr4.1:42444937-42444956 None:intergenic 20.0%
!! AATAAGAATAGAATTGCATA+TGG - chr4.1:42444541-42444560 None:intergenic 20.0%
!! ATAAGAATAGAATTGCATAT+GGG - chr4.1:42444540-42444559 None:intergenic 20.0%
!! TAATTCAATTGAAGATCATT+TGG + chr4.1:42445649-42445668 MS.gene07665:CDS 20.0%
!! TATATATACTATTACATTCG+TGG + chr4.1:42445476-42445495 MS.gene07665:intron 20.0%
!! TTATCTTATATGCTATCATT+TGG + chr4.1:42444962-42444981 MS.gene07665:intron 20.0%
!!! AATTATTCAATATTGGTTAC+AGG + chr4.1:42445622-42445641 MS.gene07665:intron 20.0%
!!! ACTTTCTGTTTTAATGAAAA+AGG + chr4.1:42445334-42445353 MS.gene07665:intron 20.0%
!!! TTGGTATGTTAATATTTTGT+TGG + chr4.1:42445357-42445376 MS.gene07665:intron 20.0%
!!! TTTGTAAAGACATATTTTCT+AGG - chr4.1:42444341-42444360 None:intergenic 20.0%
! AAATTCAAATGTAATGAGAC+TGG - chr4.1:42445107-42445126 None:intergenic 25.0%
! AAGTAGGCATATATAAACAA+AGG - chr4.1:42444241-42444260 None:intergenic 25.0%
! AATATAATAAGCTCAAAACC+TGG + chr4.1:42444786-42444805 MS.gene07665:intron 25.0%
! ACTTTCTAATGTCAAATCAT+TGG + chr4.1:42444439-42444458 MS.gene07665:CDS 25.0%
! AGTTTGAAAGAAGGTTAAAT+TGG - chr4.1:42444928-42444947 None:intergenic 25.0%
! CTCATTACATTTGAATTTGT+TGG + chr4.1:42445109-42445128 MS.gene07665:CDS 25.0%
! TAACACTTAATAACAGAAGT+AGG - chr4.1:42444257-42444276 None:intergenic 25.0%
! TCAAAACATAAAAACTGAGT+TGG + chr4.1:42445135-42445154 MS.gene07665:CDS 25.0%
!!! TCTGTTTTAATGAAAAAGGT+TGG + chr4.1:42445338-42445357 MS.gene07665:intron 25.0%
!!! TTCTCTTGTTGATTTTTCAT+TGG + chr4.1:42444313-42444332 MS.gene07665:CDS 25.0%
AAAAAAAGTTCCTCCAAATG+TGG - chr4.1:42444161-42444180 None:intergenic 30.0%
AAATATCTGAGAAATGCAGT+TGG + chr4.1:42444654-42444673 MS.gene07665:CDS 30.0%
AATGTCTGTAAGAGTAAGAA+AGG - chr4.1:42445416-42445435 None:intergenic 30.0%
AATTTGTATACAGTCCTGAA+GGG + chr4.1:42444416-42444435 MS.gene07665:CDS 30.0%
AGATGAAGAATCTTTAGTGA+CGG - chr4.1:42444065-42444084 None:intergenic 30.0%
AGTAGAAAAAAGTTTACGCA+AGG + chr4.1:42445237-42445256 MS.gene07665:intron 30.0%
GAGATATAAAGTTGTGTTGA+TGG - chr4.1:42445447-42445466 None:intergenic 30.0%
GATCTCAATAAGTTTCTATC+TGG + chr4.1:42444131-42444150 MS.gene07665:CDS 30.0%
GTAGAAAAAAGTTTACGCAA+GGG + chr4.1:42445238-42445257 MS.gene07665:intron 30.0%
TACAAATTGTTAAAATCCGC+AGG - chr4.1:42444404-42444423 None:intergenic 30.0%
TAGAAAAAAGTTTACGCAAG+GGG + chr4.1:42445239-42445258 MS.gene07665:intron 30.0%
TGAAAGAAGGTTAAATTGGA+AGG - chr4.1:42444924-42444943 None:intergenic 30.0%
TGTCTTCAAAAAGTGAAAAG+AGG - chr4.1:42444213-42444232 None:intergenic 30.0%
TTGATTTCTTTGGATAACAC+AGG - chr4.1:42443780-42443799 None:intergenic 30.0%
! AAAAAATCTTATTGCCGCTT+AGG + chr4.1:42443955-42443974 MS.gene07665:CDS 30.0%
! AACTCTATGTATCTTTTGCT+AGG - chr4.1:42444829-42444848 None:intergenic 30.0%
! ATTGCAAGATCCTTAAGTTT+TGG - chr4.1:42444710-42444729 None:intergenic 30.0%
! ATTTTGTTGGTATGATGTTG+TGG + chr4.1:42445370-42445389 MS.gene07665:intron 30.0%
! GAAAGTATATAGACTCTGTA+TGG - chr4.1:42445320-42445339 None:intergenic 30.0%
! TATTTTCATTTGTAAGCCTG+CGG + chr4.1:42444385-42444404 MS.gene07665:CDS 30.0%
! TTTTGTTGGTATGATGTTGT+GGG + chr4.1:42445371-42445390 MS.gene07665:intron 30.0%
!! TACTCTTCTTTTCTTTGAAG+TGG - chr4.1:42445221-42445240 None:intergenic 30.0%
!! TATAAAGTTGTGTTGATGGT+CGG - chr4.1:42445443-42445462 None:intergenic 30.0%
!!! ACTCTTCTTTTCTTTGAAGT+GGG - chr4.1:42445220-42445239 None:intergenic 30.0%
AATAGCAGCTTCATCAAGAT+TGG - chr4.1:42444369-42444388 None:intergenic 35.0%
ACACAATGCACCAAAACTTA+AGG + chr4.1:42444697-42444716 MS.gene07665:CDS 35.0%
ACATGTTCTATAGGACTCTT+TGG - chr4.1:42443682-42443701 None:intergenic 35.0%
ACTTAAGGATCTTGCAATTG+AGG + chr4.1:42444712-42444731 MS.gene07665:CDS 35.0%
AGAGAAAGATCTTCAAGTGA+CGG - chr4.1:42444299-42444318 None:intergenic 35.0%
ATGTGTTCTATCCACAAGAT+GGG + chr4.1:42443698-42443717 MS.gene07665:CDS 35.0%
CAATTTGTATACAGTCCTGA+AGG + chr4.1:42444415-42444434 MS.gene07665:CDS 35.0%
GGATAGAACACATGTTCTAT+AGG - chr4.1:42443691-42443710 None:intergenic 35.0%
GGTAATTGAAAGTGAAGGTT+GGG - chr4.1:42443744-42443763 None:intergenic 35.0%
TCTCTGGTAATTGAAAGTGA+AGG - chr4.1:42443749-42443768 None:intergenic 35.0%
TCTTCATCTCCATGAAAATG+TGG + chr4.1:42444076-42444095 MS.gene07665:CDS 35.0%
TGAAAAGAAGACTTGAGTGT+TGG - chr4.1:42444032-42444051 None:intergenic 35.0%
TGAAATCAATTCCCGAAGAA+AGG + chr4.1:42445027-42445046 MS.gene07665:CDS 35.0%
TGGTAATTGAAAGTGAAGGT+TGG - chr4.1:42443745-42443764 None:intergenic 35.0%
TTTGTTGGTATGATGTTGTG+GGG + chr4.1:42445372-42445391 MS.gene07665:intron 35.0%
! ACTCGTGGTCTTAAAATTAC+GGG + chr4.1:42443995-42444014 MS.gene07665:CDS 35.0%
! CACTCGTGGTCTTAAAATTA+CGG + chr4.1:42443994-42444013 MS.gene07665:CDS 35.0%
! GTCTTTGTTATGCAGTTTCT+CGG + chr4.1:42444566-42444585 MS.gene07665:intron 35.0%
! TAGAATACGCCACATTTTCA+TGG - chr4.1:42444088-42444107 None:intergenic 35.0%
!! AAGTGAAAAGAGGTGTTGAT+AGG - chr4.1:42444203-42444222 None:intergenic 35.0%
!! CTAAGTCTTGATAGTGAGAA+TGG + chr4.1:42443846-42443865 MS.gene07665:CDS 35.0%
!! TTATATTTTCGGTGCGTCTT+AGG - chr4.1:42443821-42443840 None:intergenic 35.0%
!! TTCAAAGGCATTAGATCTCA+AGG + chr4.1:42443899-42443918 MS.gene07665:CDS 35.0%
!!! GCGGCAATAAGATTTTTTCA+TGG - chr4.1:42443953-42443972 None:intergenic 35.0%
!!! TGGAGGAACTTTTTTTAGCT+GGG + chr4.1:42444165-42444184 MS.gene07665:CDS 35.0%
!!! TTGGAGGAACTTTTTTTAGC+TGG + chr4.1:42444164-42444183 MS.gene07665:CDS 35.0%
AAAGTGAAGGTTGGGAATCT+TGG - chr4.1:42443736-42443755 None:intergenic 40.0%
AACACAGGATCTGAATTCTC+TGG - chr4.1:42443765-42443784 None:intergenic 40.0%
AACCACATGATGTACACATG+TGG + chr4.1:42443874-42443893 MS.gene07665:CDS 40.0%
AACTCGTACCCATACTAGTA+CGG - chr4.1:42445278-42445297 None:intergenic 40.0%
AATCAATTCCCGAAGAAAGG+AGG + chr4.1:42445030-42445049 MS.gene07665:CDS 40.0%
ACATGTGTACATCATGTGGT+TGG - chr4.1:42443875-42443894 None:intergenic 40.0%
ACCACATGATGTACACATGT+GGG + chr4.1:42443875-42443894 MS.gene07665:CDS 40.0%
AGAAAGATCTTCAAGTGACG+GGG - chr4.1:42444297-42444316 None:intergenic 40.0%
AGAAATCCTCCGTACTAGTA+TGG + chr4.1:42445266-42445285 MS.gene07665:intron 40.0%
AGATCATTTGGATGCCTTCA+AGG + chr4.1:42445661-42445680 MS.gene07665:CDS 40.0%
AGTTTCCAACCTCCTTTCTT+CGG - chr4.1:42445042-42445061 None:intergenic 40.0%
CATGTGTTCTATCCACAAGA+TGG + chr4.1:42443697-42443716 MS.gene07665:CDS 40.0%
GAAATCCTCCGTACTAGTAT+GGG + chr4.1:42445267-42445286 MS.gene07665:intron 40.0%
GAGAAAGATCTTCAAGTGAC+GGG - chr4.1:42444298-42444317 None:intergenic 40.0%
GAGATCTTCAATACCCTTGA+AGG - chr4.1:42445678-42445697 None:intergenic 40.0%
GATCATTTGGATGCCTTCAA+GGG + chr4.1:42445662-42445681 MS.gene07665:CDS 40.0%
GTTCTATAGGACTCTTTGGT+TGG - chr4.1:42443678-42443697 None:intergenic 40.0%
TATAGGACTCTTTGGTTGGT+AGG - chr4.1:42443674-42443693 None:intergenic 40.0%
TCACTCAAGTAAGCTAGAGA+AGG + chr4.1:42445180-42445199 MS.gene07665:intron 40.0%
TCTATCTGGTTGTCCACATT+TGG + chr4.1:42444145-42444164 MS.gene07665:CDS 40.0%
TGACATTAGAAAGTCCCTTC+AGG - chr4.1:42444433-42444452 None:intergenic 40.0%
TGTACACATGTGGGTTTCAA+AGG + chr4.1:42443884-42443903 MS.gene07665:CDS 40.0%
! CTCGTGGTCTTAAAATTACG+GGG + chr4.1:42443996-42444015 MS.gene07665:CDS 40.0%
!! GGTGTTGATAGGTAATGCAA+AGG - chr4.1:42444192-42444211 None:intergenic 40.0%
AATTCCCGAAGAAAGGAGGT+TGG + chr4.1:42445034-42445053 MS.gene07665:CDS 45.0%
ACAGATCCAAGTCAAGTTCC+TGG - chr4.1:42443926-42443945 None:intergenic 45.0%
ACCCACATGTGTACATCATG+TGG - chr4.1:42443879-42443898 None:intergenic 45.0%
AGACATGCCGGAGATATCAA+TGG - chr4.1:42445079-42445098 None:intergenic 45.0%
ATCTGGTTGTCCACATTTGG+AGG + chr4.1:42444148-42444167 MS.gene07665:CDS 45.0%
GTTTCCAACCTCCTTTCTTC+GGG - chr4.1:42445041-42445060 None:intergenic 45.0%
TCACACATGGAAAGCCTAAG+CGG - chr4.1:42443972-42443991 None:intergenic 45.0%
TGTTATGCAGTTTCTCGGCA+TGG + chr4.1:42444571-42444590 MS.gene07665:intron 45.0%
! AGACTGGTTGTAAGACATGC+CGG - chr4.1:42445091-42445110 None:intergenic 45.0%
!! GACGGGGCATTAATTTGTAG+TGG - chr4.1:42444281-42444300 None:intergenic 45.0%
!! TAAAATTAATTATTCAATAT+TGG + chr4.1:42445615-42445634 MS.gene07665:intron 5.0%
!!! ATATATTTAAAAATTTTAAG+AGG - chr4.1:42445543-42445562 None:intergenic 5.0%
AGGAGGTTGGAAACTCGAGT+TGG + chr4.1:42445047-42445066 MS.gene07665:CDS 50.0%
CAAGGTCCAGGAACTTGACT+TGG + chr4.1:42443917-42443936 MS.gene07665:CDS 50.0%
GGAGGTTGGAAACTCGAGTT+GGG + chr4.1:42445048-42445067 MS.gene07665:CDS 50.0%
GGCATTAGATCTCAAGGTCC+AGG + chr4.1:42443905-42443924 MS.gene07665:CDS 50.0%
GGTGGAGCCATTGATATCTC+CGG + chr4.1:42445069-42445088 MS.gene07665:CDS 50.0%
GTCTTTGCTCTTCTTGTGCC+AGG - chr4.1:42444807-42444826 None:intergenic 50.0%
GTTGGTATGATGTTGTGGGG+TGG + chr4.1:42445375-42445394 MS.gene07665:intron 50.0%
TATGCAGTTTCTCGGCATGG+AGG + chr4.1:42444574-42444593 MS.gene07665:intron 50.0%
TCGTACCCATACTAGTACGG+AGG - chr4.1:42445275-42445294 None:intergenic 50.0%
TTCCATGTGTGAGTCACTCG+TGG + chr4.1:42443980-42443999 MS.gene07665:CDS 50.0%
GACCACGAGTGACTCACACA+TGG - chr4.1:42443985-42444004 None:intergenic 55.0%
! GCAGATCGACTCCCATCTTG+TGG - chr4.1:42443712-42443731 None:intergenic 55.0%
!! GGTTGGAAACTCGAGTTGGG+TGG + chr4.1:42445051-42445070 MS.gene07665:CDS 55.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 42443597 42445727 42443597 ID=MS.gene07665
chr4.1 mRNA 42443597 42445727 42443597 ID=MS.gene07665.t1;Parent=MS.gene07665
chr4.1 exon 42443597 42444484 42443597 ID=MS.gene07665.t1.exon1;Parent=MS.gene07665.t1
chr4.1 CDS 42443597 42444484 42443597 ID=cds.MS.gene07665.t1;Parent=MS.gene07665.t1
chr4.1 exon 42444581 42444733 42444581 ID=MS.gene07665.t1.exon2;Parent=MS.gene07665.t1
chr4.1 CDS 42444581 42444733 42444581 ID=cds.MS.gene07665.t1;Parent=MS.gene07665.t1
chr4.1 exon 42445019 42445174 42445019 ID=MS.gene07665.t1.exon3;Parent=MS.gene07665.t1
chr4.1 CDS 42445019 42445174 42445019 ID=cds.MS.gene07665.t1;Parent=MS.gene07665.t1
chr4.1 exon 42445644 42445727 42445644 ID=MS.gene07665.t1.exon4;Parent=MS.gene07665.t1
chr4.1 CDS 42445644 42445727 42445644 ID=cds.MS.gene07665.t1;Parent=MS.gene07665.t1
Gene Sequence

>MS.gene07665

ATGGCGTGCTCTGATGAAGAACATGATCGATTAAGCAATCTCTCAGACGATTTGATTTGTCATATTTTGTCTTTCCTACCAACCAAAGAGTCCTATAGAACATGTGTTCTATCCACAAGATGGGAGTCGATCTGCACCAAGATTCCCAACCTTCACTTTCAATTACCAGAGAATTCAGATCCTGTGTTATCCAAAGAAATCAAATTTGTAAATGTTGCTCTCCTAAGACGCACCGAAAATATAAGAAAACTAAGTCTTGATAGTGAGAATGGCTGCCAACCACATGATGTACACATGTGGGTTTCAAAGGCATTAGATCTCAAGGTCCAGGAACTTGACTTGGATCTGTTTCGCCATGAAAAAATCTTATTGCCGCTTAGGCTTTCCATGTGTGAGTCACTCGTGGTCTTAAAATTACGGGGCAAAATTCAACCAACACTCAAGTCTTCTTTTCATGTATATTTACCGTCACTAAAGATTCTTCATCTCCATGAAAATGTGGCGTATTCTATCTTTGATGATTGTGCAGAGTATGATCTCAATAAGTTTCTATCTGGTTGTCCACATTTGGAGGAACTTTTTTTAGCTGGGACCTTTGCATTACCTATCAACACCTCTTTTCACTTTTTGAAGACATTATGCCTTTGTTTATATATGCCTACTTCTGTTATTAAGTGTTATCCACTACAAATTAATGCCCCGTCACTTGAAGATCTTTCTCTTGTTGATTTTTCATTGGCTCCTAGAAAATATGTCTTTACAAACTTGTCCAATCTTGATGAAGCTGCTATTTTCATTTGTAAGCCTGCGGATTTTAACAATTTGTATACAGTCCTGAAGGGACTTTCTAATGTCAAATCATTGGCTCTCGATTCTAACACTTTTCATGTAAGTTTCATAAATATTTTCCTTTTTTAATTACAAGTTTCATATTTAGTCACCCATATGCAATTCTATTCTTATTTTATCGTCTTTGTTATGCAGTTTCTCGGCATGGAGGACAAACTTGACAACTTACATCTTCTCACTTTTCACAATTTATTATCTTTATCGGTTGAAATATCTGAGAAATGCAGTTGGAATATGCTTGTCAGCTTTCTACACAATGCACCAAAACTTAAGGATCTTGCAATTGAGGTGTGAATGATTTTTTTAACTATATTTGCACAATTTTTTTTTTAAAGGATAAAATATAATAAGCTCAAAACCTGGCACAAGAAGAGCAAAGACCTAGCAAAAGATACATAGAGTTTGCAAATAAAACAGATCAACAAATTAATTAATTCAATACAATCTATATATGATCTATATTTGTGTAGATTGTCCTTCCAATTTAACCTTCTTTCAAACTATTTTACTTACAATTTATCTTATATGCTATCATTTGGAAAATTCTAATGATAATTTTTGGTTTACATGCAGAGTAAAATTGAAATCAATTCCCGAAGAAAGGAGGTTGGAAACTCGAGTTGGGTGGAGCCATTGATATCTCCGGCATGTCTTACAACCAGTCTCATTACATTTGAATTTGTTGGAATTCAAAACATAAAAACTGAGTTGGACTTTACGCGATATATTGTAAGTCACTCAAGTAAGCTAGAGAAGGTAAAGATTTTCACACCCACTTCAAAGAAAAGAAGAGTAGAAAAAAGTTTACGCAAGGGGTCAAAGAAATCCTCCGTACTAGTATGGGTACGAGTTTTACACACTTTCTTTTCTTCCATACAGAGTCTATATACTTTCTGTTTTAATGAAAAAGGTTGGTATGTTAATATTTTGTTGGTATGATGTTGTGGGGTGGTGATAGAACTTTCATCCTTTCTTACTCTTACAGACATTAACTCCGACCATCAACACAACTTTATATCTCTTGAATGTATATATATACTATTACATTCGTGGTTGAGAATAAGACTGTTTTTCTTAAAATATGTAAATTATATCCTCTTAAAATTTTTAAATATATTAATTTTTTTATCGGTATACTTTAATGATTTTATCATTTATATTTATAATCTTAAAATTAATTATTCAATATTGGTTACAGGATATTAATTCAATTGAAGATCATTTGGATGCCTTCAAGGGTATTGAAGATCTCTTTTTTGAGCTGTTCTTGCCCAATAAATAA

Protein sequence

>MS.gene07665.t1

MACSDEEHDRLSNLSDDLICHILSFLPTKESYRTCVLSTRWESICTKIPNLHFQLPENSDPVLSKEIKFVNVALLRRTENIRKLSLDSENGCQPHDVHMWVSKALDLKVQELDLDLFRHEKILLPLRLSMCESLVVLKLRGKIQPTLKSSFHVYLPSLKILHLHENVAYSIFDDCAEYDLNKFLSGCPHLEELFLAGTFALPINTSFHFLKTLCLCLYMPTSVIKCYPLQINAPSLEDLSLVDFSLAPRKYVFTNLSNLDEAAIFICKPADFNNLYTVLKGLSNVKSLALDSNTFHFLGMEDKLDNLHLLTFHNLLSLSVEISEKCSWNMLVSFLHNAPKLKDLAIESKIEINSRRKEVGNSSWVEPLISPACLTTSLITFEFVGIQNIKTELDFTRYIDINSIEDHLDAFKGIEDLFFELFLPNK