Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03752.t1 | KEH29904.1 | 88.5 | 470 | 35 | 1 | 1 | 470 | 1 | 451 | 4.30E-213 | 750.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03752.t1 | Q9LX55 | 24.7 | 429 | 234 | 12 | 9 | 400 | 13 | 389 | 2.8e-19 | 98.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03752.t1 | A0A072UJK1 | 88.5 | 470 | 35 | 1 | 1 | 470 | 1 | 451 | 3.1e-213 | 750.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03752.t1 | MTR_4g055990 | 90.213 | 470 | 27 | 1 | 1 | 470 | 1 | 451 | 0.0 | 848 |
MS.gene03752.t1 | MTR_4g055990 | 90.213 | 470 | 27 | 1 | 1 | 470 | 1 | 451 | 0.0 | 847 |
MS.gene03752.t1 | MTR_4g055580 | 81.064 | 470 | 64 | 3 | 1 | 470 | 92 | 536 | 0.0 | 736 |
MS.gene03752.t1 | MTR_4g056070 | 78.091 | 461 | 74 | 3 | 1 | 458 | 1 | 437 | 0.0 | 709 |
MS.gene03752.t1 | MTR_4g056040 | 76.170 | 470 | 81 | 3 | 1 | 470 | 1 | 439 | 0.0 | 702 |
MS.gene03752.t1 | MTR_4g056020 | 75.699 | 465 | 52 | 4 | 1 | 465 | 1 | 404 | 0.0 | 680 |
MS.gene03752.t1 | MTR_4g056030 | 69.362 | 470 | 83 | 4 | 1 | 470 | 1 | 409 | 0.0 | 622 |
MS.gene03752.t1 | MTR_1g038710 | 56.723 | 476 | 139 | 7 | 1 | 470 | 11 | 425 | 2.35e-162 | 468 |
MS.gene03752.t1 | MTR_1g090883 | 54.854 | 412 | 126 | 5 | 2 | 411 | 12 | 365 | 1.11e-134 | 395 |
MS.gene03752.t1 | MTR_7g110920 | 55.758 | 330 | 97 | 4 | 155 | 470 | 1 | 295 | 4.13e-112 | 335 |
MS.gene03752.t1 | MTR_4g093690 | 45.732 | 328 | 113 | 8 | 1 | 324 | 10 | 276 | 1.09e-68 | 222 |
MS.gene03752.t1 | MTR_4g056020 | 81.416 | 113 | 16 | 1 | 353 | 465 | 1 | 108 | 1.23e-58 | 191 |
MS.gene03752.t1 | MTR_4g056010 | 90.000 | 100 | 10 | 0 | 124 | 223 | 1 | 100 | 1.74e-56 | 184 |
MS.gene03752.t1 | MTR_1g090900 | 49.356 | 233 | 59 | 5 | 1 | 230 | 1 | 177 | 9.57e-52 | 175 |
MS.gene03752.t1 | MTR_5g080710 | 28.059 | 474 | 237 | 16 | 9 | 468 | 33 | 416 | 1.60e-22 | 100 |
MS.gene03752.t1 | MTR_8g062270 | 27.331 | 472 | 264 | 17 | 9 | 468 | 16 | 420 | 7.71e-22 | 98.6 |
MS.gene03752.t1 | MTR_8g058970 | 26.489 | 487 | 278 | 18 | 4 | 470 | 14 | 440 | 6.16e-21 | 95.9 |
MS.gene03752.t1 | MTR_7g115270 | 24.733 | 469 | 227 | 15 | 9 | 467 | 12 | 364 | 8.06e-21 | 95.1 |
MS.gene03752.t1 | MTR_8g014260 | 26.543 | 486 | 254 | 15 | 6 | 470 | 13 | 416 | 1.76e-20 | 94.4 |
MS.gene03752.t1 | MTR_1g090890 | 63.492 | 63 | 20 | 1 | 412 | 471 | 30 | 92 | 2.17e-20 | 87.0 |
MS.gene03752.t1 | MTR_8g445780 | 26.496 | 468 | 238 | 14 | 7 | 457 | 11 | 389 | 1.65e-19 | 90.9 |
MS.gene03752.t1 | MTR_8g468810 | 25.572 | 481 | 266 | 15 | 4 | 468 | 20 | 424 | 1.09e-18 | 89.0 |
MS.gene03752.t1 | MTR_5g084070 | 29.032 | 341 | 208 | 11 | 132 | 467 | 78 | 389 | 2.41e-18 | 87.8 |
MS.gene03752.t1 | MTR_2g007400 | 24.948 | 477 | 224 | 19 | 9 | 468 | 12 | 371 | 1.11e-17 | 85.5 |
MS.gene03752.t1 | MTR_8g467800 | 29.919 | 371 | 222 | 15 | 115 | 468 | 70 | 419 | 1.46e-17 | 85.5 |
MS.gene03752.t1 | MTR_7g056433 | 26.226 | 469 | 217 | 18 | 4 | 467 | 7 | 351 | 3.23e-17 | 84.0 |
MS.gene03752.t1 | MTR_8g468840 | 25.104 | 482 | 266 | 20 | 8 | 470 | 13 | 418 | 9.90e-17 | 82.8 |
MS.gene03752.t1 | MTR_8g014160 | 25.895 | 475 | 217 | 19 | 2 | 464 | 34 | 385 | 1.55e-15 | 79.0 |
MS.gene03752.t1 | MTR_5g007410 | 24.783 | 460 | 228 | 18 | 11 | 468 | 28 | 371 | 5.35e-15 | 77.8 |
MS.gene03752.t1 | MTR_8g468810 | 26.761 | 355 | 183 | 11 | 4 | 346 | 20 | 309 | 1.38e-14 | 75.5 |
MS.gene03752.t1 | MTR_8g468810 | 26.761 | 355 | 183 | 11 | 4 | 346 | 20 | 309 | 1.67e-14 | 75.1 |
MS.gene03752.t1 | MTR_2g083840 | 28.729 | 362 | 213 | 13 | 124 | 468 | 85 | 418 | 1.84e-14 | 75.9 |
MS.gene03752.t1 | MTR_8g468810 | 26.761 | 355 | 183 | 11 | 4 | 346 | 20 | 309 | 1.97e-14 | 75.1 |
MS.gene03752.t1 | MTR_4g080773 | 26.305 | 479 | 273 | 19 | 9 | 471 | 19 | 433 | 2.75e-14 | 75.5 |
MS.gene03752.t1 | MTR_4g080773 | 26.305 | 479 | 273 | 19 | 9 | 471 | 19 | 433 | 3.43e-14 | 75.5 |
MS.gene03752.t1 | MTR_8g468810 | 26.761 | 355 | 183 | 11 | 4 | 346 | 20 | 309 | 4.71e-14 | 74.3 |
MS.gene03752.t1 | MTR_6g044572 | 30.435 | 253 | 124 | 11 | 9 | 251 | 2 | 212 | 2.86e-12 | 68.9 |
MS.gene03752.t1 | MTR_8g062310 | 29.323 | 266 | 113 | 12 | 9 | 269 | 25 | 220 | 4.57e-12 | 68.6 |
MS.gene03752.t1 | MTR_6g044560 | 30.435 | 253 | 124 | 11 | 9 | 251 | 178 | 388 | 8.32e-12 | 68.2 |
MS.gene03752.t1 | MTR_8g467800 | 33.333 | 252 | 138 | 10 | 115 | 350 | 70 | 307 | 1.29e-11 | 66.6 |
MS.gene03752.t1 | MTR_5g008950 | 29.605 | 152 | 86 | 5 | 367 | 504 | 233 | 377 | 1.30e-11 | 66.6 |
MS.gene03752.t1 | MTR_8g058965 | 24.597 | 496 | 247 | 20 | 9 | 467 | 13 | 418 | 3.80e-11 | 65.5 |
MS.gene03752.t1 | MTR_4g045680 | 41.584 | 101 | 53 | 3 | 6 | 102 | 13 | 111 | 5.28e-11 | 64.7 |
MS.gene03752.t1 | MTR_7g110910 | 81.579 | 38 | 7 | 0 | 1 | 38 | 158 | 195 | 5.84e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03752.t1 | AT5G62970 | 29.299 | 471 | 254 | 20 | 9 | 464 | 2 | 408 | 1.01e-24 | 107 |
MS.gene03752.t1 | AT5G38396 | 27.837 | 467 | 239 | 17 | 9 | 446 | 2 | 399 | 2.38e-23 | 103 |
MS.gene03752.t1 | AT3G59160 | 26.761 | 426 | 231 | 16 | 9 | 401 | 13 | 390 | 1.07e-22 | 101 |
MS.gene03752.t1 | AT4G26340 | 27.331 | 472 | 241 | 21 | 9 | 468 | 2 | 383 | 1.51e-22 | 100 |
MS.gene03752.t1 | AT4G10400 | 25.431 | 464 | 251 | 14 | 9 | 468 | 2 | 374 | 5.85e-22 | 98.6 |
MS.gene03752.t1 | AT4G10400 | 25.431 | 464 | 251 | 14 | 9 | 468 | 2 | 374 | 5.85e-22 | 98.6 |
MS.gene03752.t1 | AT4G10400 | 25.431 | 464 | 251 | 14 | 9 | 468 | 2 | 374 | 5.85e-22 | 98.6 |
MS.gene03752.t1 | AT4G00315 | 26.971 | 482 | 251 | 19 | 9 | 468 | 2 | 404 | 6.56e-22 | 98.6 |
MS.gene03752.t1 | AT3G59190 | 27.294 | 425 | 215 | 13 | 9 | 404 | 12 | 371 | 2.32e-21 | 96.3 |
MS.gene03752.t1 | AT5G56380 | 26.681 | 476 | 241 | 17 | 9 | 460 | 2 | 393 | 2.39e-21 | 97.1 |
MS.gene03752.t1 | AT5G56380 | 26.681 | 476 | 241 | 17 | 9 | 460 | 2 | 393 | 2.39e-21 | 97.1 |
MS.gene03752.t1 | AT1G58310 | 28.029 | 421 | 222 | 16 | 9 | 401 | 8 | 375 | 2.54e-21 | 97.4 |
MS.gene03752.t1 | AT3G59190 | 27.442 | 430 | 217 | 14 | 9 | 409 | 12 | 375 | 4.66e-21 | 96.7 |
MS.gene03752.t1 | AT1G55660 | 26.096 | 479 | 259 | 19 | 9 | 468 | 53 | 455 | 9.80e-21 | 95.5 |
MS.gene03752.t1 | AT4G14103 | 27.626 | 438 | 224 | 16 | 8 | 420 | 7 | 376 | 1.06e-20 | 95.1 |
MS.gene03752.t1 | AT4G00320 | 26.950 | 423 | 227 | 13 | 3 | 401 | 7 | 371 | 1.23e-20 | 95.5 |
MS.gene03752.t1 | AT1G51370 | 27.273 | 506 | 253 | 20 | 7 | 490 | 17 | 429 | 6.52e-20 | 92.8 |
MS.gene03752.t1 | AT3G50710 | 26.439 | 469 | 247 | 17 | 9 | 464 | 2 | 385 | 1.41e-19 | 91.7 |
MS.gene03752.t1 | AT4G14103 | 27.163 | 416 | 208 | 15 | 9 | 400 | 8 | 352 | 1.55e-19 | 90.9 |
MS.gene03752.t1 | AT4G14103 | 27.163 | 416 | 208 | 15 | 9 | 400 | 8 | 352 | 1.55e-19 | 90.9 |
MS.gene03752.t1 | AT2G26860 | 29.538 | 325 | 198 | 9 | 149 | 464 | 86 | 388 | 1.92e-19 | 90.9 |
MS.gene03752.t1 | AT2G26860 | 29.538 | 325 | 198 | 9 | 149 | 464 | 86 | 388 | 1.92e-19 | 90.9 |
MS.gene03752.t1 | AT5G41840 | 26.636 | 428 | 221 | 11 | 9 | 401 | 14 | 383 | 2.78e-19 | 91.3 |
MS.gene03752.t1 | AT4G14096 | 25.635 | 433 | 233 | 14 | 8 | 420 | 7 | 370 | 2.93e-19 | 90.9 |
MS.gene03752.t1 | AT4G14096 | 25.635 | 433 | 233 | 14 | 8 | 420 | 7 | 370 | 2.93e-19 | 90.9 |
MS.gene03752.t1 | AT3G59170 | 27.635 | 427 | 229 | 16 | 9 | 401 | 7 | 387 | 3.14e-18 | 87.8 |
MS.gene03752.t1 | AT4G26350 | 24.066 | 482 | 247 | 15 | 9 | 465 | 2 | 389 | 3.22e-18 | 87.4 |
MS.gene03752.t1 | AT3G03030 | 25.986 | 431 | 231 | 11 | 9 | 409 | 2 | 374 | 7.90e-18 | 86.7 |
MS.gene03752.t1 | AT3G59210 | 27.818 | 417 | 219 | 13 | 5 | 401 | 3 | 357 | 1.59e-17 | 85.9 |
MS.gene03752.t1 | AT3G59210 | 27.818 | 417 | 219 | 13 | 5 | 401 | 3 | 357 | 1.59e-17 | 85.9 |
MS.gene03752.t1 | AT3G59210 | 27.818 | 417 | 219 | 13 | 5 | 401 | 3 | 357 | 1.59e-17 | 85.9 |
MS.gene03752.t1 | AT3G59210 | 27.818 | 417 | 219 | 13 | 5 | 401 | 3 | 357 | 1.59e-17 | 85.9 |
MS.gene03752.t1 | AT3G59210 | 27.818 | 417 | 219 | 13 | 5 | 401 | 3 | 357 | 1.59e-17 | 85.9 |
MS.gene03752.t1 | AT3G58880 | 25.546 | 458 | 255 | 13 | 9 | 446 | 3 | 394 | 1.95e-17 | 85.1 |
MS.gene03752.t1 | AT3G59200 | 25.000 | 432 | 217 | 12 | 8 | 404 | 6 | 365 | 3.00e-17 | 84.0 |
MS.gene03752.t1 | AT4G13965 | 26.981 | 467 | 237 | 20 | 9 | 464 | 10 | 383 | 3.57e-17 | 84.3 |
MS.gene03752.t1 | AT4G10420 | 27.679 | 336 | 194 | 12 | 155 | 479 | 1 | 298 | 4.23e-17 | 82.8 |
MS.gene03752.t1 | AT3G58860 | 25.586 | 469 | 258 | 16 | 6 | 456 | 4 | 399 | 1.15e-16 | 82.8 |
MS.gene03752.t1 | AT3G58920 | 25.768 | 423 | 226 | 13 | 9 | 402 | 2 | 365 | 1.33e-16 | 82.8 |
MS.gene03752.t1 | AT3G59200 | 24.359 | 468 | 240 | 13 | 8 | 440 | 6 | 394 | 1.50e-16 | 82.8 |
MS.gene03752.t1 | AT1G55660 | 27.195 | 353 | 179 | 12 | 9 | 346 | 53 | 342 | 1.55e-16 | 81.6 |
MS.gene03752.t1 | AT1G51370 | 27.594 | 453 | 221 | 17 | 7 | 445 | 17 | 376 | 3.82e-16 | 80.9 |
MS.gene03752.t1 | AT5G60610 | 28.963 | 328 | 187 | 13 | 151 | 464 | 83 | 378 | 5.85e-16 | 80.1 |
MS.gene03752.t1 | AT5G60610 | 28.963 | 328 | 187 | 13 | 151 | 464 | 83 | 378 | 5.85e-16 | 80.1 |
MS.gene03752.t1 | AT1G32375 | 25.474 | 475 | 253 | 17 | 9 | 470 | 2 | 388 | 6.67e-16 | 80.1 |
MS.gene03752.t1 | AT1G32375 | 25.474 | 475 | 253 | 17 | 9 | 470 | 2 | 388 | 6.67e-16 | 80.1 |
MS.gene03752.t1 | AT3G59180 | 27.704 | 379 | 213 | 17 | 120 | 455 | 33 | 393 | 1.16e-15 | 79.7 |
MS.gene03752.t1 | AT1G06630 | 28.218 | 404 | 218 | 17 | 8 | 402 | 11 | 351 | 1.29e-15 | 79.3 |
MS.gene03752.t1 | AT1G06630 | 28.218 | 404 | 218 | 17 | 8 | 402 | 11 | 351 | 1.29e-15 | 79.3 |
MS.gene03752.t1 | AT1G06630 | 28.218 | 404 | 218 | 17 | 8 | 402 | 11 | 351 | 1.29e-15 | 79.3 |
MS.gene03752.t1 | AT1G06630 | 28.218 | 404 | 218 | 17 | 8 | 402 | 11 | 351 | 1.29e-15 | 79.3 |
MS.gene03752.t1 | AT1G06630 | 28.218 | 404 | 218 | 17 | 8 | 402 | 20 | 360 | 1.51e-15 | 79.0 |
MS.gene03752.t1 | AT3G26930 | 28.947 | 304 | 172 | 12 | 174 | 464 | 80 | 352 | 2.13e-15 | 78.6 |
MS.gene03752.t1 | AT3G58900 | 26.555 | 418 | 222 | 10 | 9 | 402 | 2 | 358 | 2.34e-15 | 79.0 |
MS.gene03752.t1 | AT3G26930 | 28.947 | 304 | 172 | 12 | 174 | 464 | 125 | 397 | 2.65e-15 | 78.6 |
MS.gene03752.t1 | AT1G06630 | 28.218 | 404 | 218 | 17 | 8 | 402 | 11 | 351 | 2.89e-15 | 78.6 |
MS.gene03752.t1 | AT1G51370 | 30.242 | 248 | 105 | 8 | 7 | 254 | 17 | 196 | 3.84e-15 | 77.4 |
MS.gene03752.t1 | AT3G49030 | 26.216 | 473 | 249 | 20 | 7 | 468 | 19 | 402 | 7.96e-15 | 77.0 |
MS.gene03752.t1 | AT1G52650 | 24.904 | 522 | 271 | 20 | 9 | 494 | 2 | 438 | 1.17e-14 | 76.6 |
MS.gene03752.t1 | AT5G38590 | 27.394 | 376 | 222 | 16 | 113 | 477 | 53 | 388 | 1.47e-14 | 76.3 |
MS.gene03752.t1 | AT3G52680 | 25.647 | 464 | 213 | 15 | 9 | 445 | 21 | 379 | 1.68e-14 | 76.3 |
MS.gene03752.t1 | AT1G55030 | 24.569 | 464 | 251 | 19 | 9 | 464 | 19 | 391 | 1.70e-14 | 75.9 |
MS.gene03752.t1 | AT1G78750 | 24.746 | 493 | 268 | 18 | 2 | 470 | 11 | 424 | 1.75e-14 | 76.3 |
MS.gene03752.t1 | AT1G78750 | 24.746 | 493 | 268 | 18 | 2 | 470 | 11 | 424 | 1.75e-14 | 76.3 |
MS.gene03752.t1 | AT3G42770 | 28.986 | 345 | 180 | 13 | 14 | 350 | 4 | 291 | 1.77e-14 | 76.3 |
MS.gene03752.t1 | AT5G56700 | 31.014 | 345 | 196 | 17 | 131 | 464 | 29 | 342 | 1.91e-14 | 75.5 |
MS.gene03752.t1 | AT1G55030 | 24.569 | 464 | 251 | 19 | 9 | 464 | 9 | 381 | 2.38e-14 | 75.5 |
MS.gene03752.t1 | AT3G03030 | 26.882 | 372 | 187 | 11 | 9 | 352 | 2 | 316 | 2.94e-14 | 74.3 |
MS.gene03752.t1 | AT4G13960 | 24.897 | 486 | 253 | 17 | 9 | 463 | 2 | 406 | 3.17e-14 | 75.5 |
MS.gene03752.t1 | AT4G13960 | 24.897 | 486 | 253 | 17 | 9 | 463 | 2 | 406 | 3.17e-14 | 75.5 |
MS.gene03752.t1 | AT2G29930 | 27.685 | 419 | 195 | 20 | 9 | 402 | 12 | 347 | 4.25e-14 | 75.1 |
MS.gene03752.t1 | AT2G29930 | 27.685 | 419 | 195 | 20 | 9 | 402 | 12 | 347 | 4.25e-14 | 75.1 |
MS.gene03752.t1 | AT1G69630 | 25.653 | 421 | 223 | 14 | 2 | 402 | 11 | 361 | 6.05e-14 | 74.3 |
MS.gene03752.t1 | AT5G56410 | 26.439 | 469 | 264 | 20 | 9 | 464 | 2 | 402 | 1.54e-13 | 73.2 |
MS.gene03752.t1 | AT5G56400 | 25.737 | 373 | 203 | 17 | 124 | 468 | 90 | 416 | 1.78e-13 | 72.8 |
MS.gene03752.t1 | AT3G59240 | 24.877 | 406 | 230 | 12 | 9 | 401 | 8 | 351 | 3.11e-13 | 72.4 |
MS.gene03752.t1 | AT3G26920 | 24.923 | 325 | 209 | 10 | 147 | 464 | 4 | 300 | 9.18e-13 | 70.1 |
MS.gene03752.t1 | AT3G26920 | 24.923 | 325 | 209 | 10 | 147 | 464 | 4 | 300 | 9.18e-13 | 70.1 |
MS.gene03752.t1 | AT5G56440 | 24.842 | 475 | 251 | 20 | 9 | 464 | 2 | 389 | 1.41e-12 | 70.1 |
MS.gene03752.t1 | AT4G22280 | 29.904 | 311 | 186 | 13 | 116 | 412 | 48 | 340 | 5.80e-12 | 68.2 |
MS.gene03752.t1 | AT3G54160 | 27.964 | 329 | 195 | 12 | 96 | 402 | 22 | 330 | 7.48e-12 | 67.8 |
MS.gene03752.t1 | AT4G22280 | 31.104 | 299 | 170 | 14 | 122 | 404 | 54 | 332 | 8.92e-12 | 67.0 |
MS.gene03752.t1 | AT5G35995 | 26.333 | 300 | 171 | 12 | 137 | 409 | 78 | 354 | 1.18e-11 | 67.4 |
MS.gene03752.t1 | AT5G35995 | 26.333 | 300 | 171 | 12 | 137 | 409 | 78 | 354 | 1.18e-11 | 67.4 |
MS.gene03752.t1 | AT5G56690 | 27.586 | 464 | 250 | 19 | 11 | 464 | 4 | 391 | 1.41e-11 | 66.6 |
MS.gene03752.t1 | AT2G29930 | 32.922 | 243 | 111 | 14 | 182 | 402 | 15 | 227 | 1.67e-11 | 66.2 |
MS.gene03752.t1 | AT4G09920 | 25.360 | 347 | 188 | 12 | 9 | 351 | 2 | 281 | 2.35e-11 | 65.5 |
MS.gene03752.t1 | AT4G09920 | 25.360 | 347 | 188 | 12 | 9 | 351 | 2 | 281 | 2.35e-11 | 65.5 |
MS.gene03752.t1 | AT5G15620 | 26.588 | 425 | 216 | 17 | 9 | 412 | 2 | 351 | 2.66e-11 | 66.2 |
MS.gene03752.t1 | AT5G25860 | 25.118 | 422 | 233 | 15 | 9 | 409 | 12 | 371 | 2.92e-11 | 65.9 |
MS.gene03752.t1 | AT1G05080 | 27.273 | 330 | 191 | 13 | 152 | 464 | 103 | 400 | 3.98e-11 | 65.5 |
MS.gene03752.t1 | AT5G56370 | 28.652 | 356 | 199 | 17 | 124 | 464 | 57 | 372 | 4.33e-11 | 65.5 |
MS.gene03752.t1 | AT5G56370 | 28.652 | 356 | 199 | 17 | 124 | 464 | 57 | 372 | 4.33e-11 | 65.5 |
MS.gene03752.t1 | AT4G09920 | 25.723 | 346 | 186 | 13 | 9 | 350 | 2 | 280 | 4.56e-11 | 64.3 |
MS.gene03752.t1 | AT4G09920 | 25.723 | 346 | 186 | 13 | 9 | 350 | 2 | 280 | 4.56e-11 | 64.3 |
MS.gene03752.t1 | AT4G09920 | 25.723 | 346 | 186 | 13 | 9 | 350 | 2 | 280 | 4.56e-11 | 64.3 |
MS.gene03752.t1 | AT1G13780 | 23.506 | 502 | 267 | 21 | 9 | 477 | 10 | 427 | 6.96e-11 | 64.7 |
Find 99 sgRNAs with CRISPR-Local
Find 154 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCATTACATTTGAATTTAA+AGG | 0.124626 | 4.3:+45103063 | MS.gene03752:CDS |
AACATAGTTGACCCAATATT+TGG | 0.181738 | 4.3:-45104243 | None:intergenic |
TAAAGAATTGGTATCTTCTT+TGG | 0.229891 | 4.3:-45101585 | None:intergenic |
GCTTTAGCATATCCAAATAT+TGG | 0.259983 | 4.3:+45104231 | MS.gene03752:CDS |
CTAAGGCTTGATAGCGAAAA+AGG | 0.263082 | 4.3:+45101755 | MS.gene03752:CDS |
GAAACTTACATGAAAAGTTT+TGG | 0.271530 | 4.3:-45102380 | None:intergenic |
CTATATTCTCGGAGCGTCTT+TGG | 0.278515 | 4.3:-45101619 | None:intergenic |
ATTGCAAGATCCTTAAGTTT+TGG | 0.285282 | 4.3:-45102615 | None:intergenic |
TAAAGATTGGAATTCTTCTT+TGG | 0.289144 | 4.3:-45101528 | None:intergenic |
GCAGATCGACTCCCATCTTT+TGG | 0.302315 | 4.3:-45101450 | None:intergenic |
GGACAGCAAGATTTAAAGAT+TGG | 0.302591 | 4.3:-45101541 | None:intergenic |
TCTATCTGGTTGTCCACATT+TGG | 0.307537 | 4.3:+45102054 | MS.gene03752:CDS |
CTATATTCTCGGAGCGTCTT+AGG | 0.313964 | 4.3:-45101562 | None:intergenic |
CTTTAGCATATCCAAATATT+GGG | 0.349095 | 4.3:+45104232 | MS.gene03752:CDS |
ATCTTCTTTGGCTATATTCT+CGG | 0.349747 | 4.3:-45101573 | None:intergenic |
AACTCAGGGTCTGAAATTTC+TGG | 0.368291 | 4.3:-45101503 | None:intergenic |
GAAAGCAAGCTGTAAAGAAT+TGG | 0.371522 | 4.3:-45101597 | None:intergenic |
TATTAGTTTGACTATATTCT+CGG | 0.399370 | 4.3:-45101630 | None:intergenic |
ATCTCAAGGTCTAACATGCC+TGG | 0.403485 | 4.3:-45104314 | None:intergenic |
GAAAATTTGAAATCAATTCC+CGG | 0.407633 | 4.3:+45102974 | MS.gene03752:CDS |
ACTCGTGGTCTTAAAATTGC+GGG | 0.408358 | 4.3:+45101904 | MS.gene03752:CDS |
AAGAGCAGCTTCATCGAGAT+TGG | 0.416322 | 4.3:-45102275 | None:intergenic |
ACAGATCCAAGTCAAGTTCC+TGG | 0.422138 | 4.3:-45101832 | None:intergenic |
ACAGAATGCTCCAAAACTTA+AGG | 0.424972 | 4.3:+45102605 | MS.gene03752:CDS |
ATCTGGTTGTCCACATTTGG+AGG | 0.433975 | 4.3:+45102057 | MS.gene03752:CDS |
AGGAGGTTGGAAACTCTAGA+TGG | 0.436425 | 4.3:+45103001 | MS.gene03752:CDS |
GGTAAATGAAAGTGAAGGTT+GGG | 0.445905 | 4.3:-45101482 | None:intergenic |
CTTGCAGCTTAATTGATTCA+AGG | 0.446923 | 4.3:-45104269 | None:intergenic |
AATTTGTATACACTCTTGAA+AGG | 0.452090 | 4.3:+45102325 | MS.gene03752:CDS |
CAAGGTCCAGGAACTTGACT+TGG | 0.457085 | 4.3:+45101826 | MS.gene03752:CDS |
AGTTTCCAACCTCCTCTCTC+CGG | 0.464355 | 4.3:-45102993 | None:intergenic |
ACTAATACTTGACAGTAAGA+TGG | 0.466673 | 4.3:+45101646 | MS.gene03752:CDS |
AAATTCAAATGTAATGAGAC+TGG | 0.466724 | 4.3:-45103058 | None:intergenic |
CATGTGTTCTATCCAAAAGA+TGG | 0.467948 | 4.3:+45101438 | MS.gene03752:CDS |
AAAGTGAAGGTTGGGAATCT+TGG | 0.470105 | 4.3:-45101474 | None:intergenic |
GTGACTCACACGTGGAAAGC+TGG | 0.470578 | 4.3:-45101883 | None:intergenic |
TCAAAACATTAAAACTGAGT+TGG | 0.477665 | 4.3:+45103089 | MS.gene03752:CDS |
GTATACAAATTGTTAAAATC+CGG | 0.478212 | 4.3:-45102313 | None:intergenic |
TCTTTGCATTTGCAAGCGTC+CGG | 0.481989 | 4.3:+45102294 | MS.gene03752:CDS |
GCCACATGATGTACACTTGT+GGG | 0.485379 | 4.3:+45101676 | MS.gene03752:CDS |
AAGGATCTTGCAATTGCGGT+TGG | 0.485603 | 4.3:+45102624 | MS.gene03752:CDS |
ATTTGTATACACTCTTGAAA+GGG | 0.488919 | 4.3:+45102326 | MS.gene03752:CDS |
TCTCAAGGTCTAACATGCCT+GGG | 0.489640 | 4.3:-45104313 | None:intergenic |
AAGTAGGCATATATAACAAA+AGG | 0.493857 | 4.3:-45102147 | None:intergenic |
ACTTAAGGATCTTGCAATTG+CGG | 0.496044 | 4.3:+45102620 | MS.gene03752:CDS |
GGCATTAGATCTCAAGGTCC+AGG | 0.496808 | 4.3:+45101814 | MS.gene03752:CDS |
AATTCTTCTTTGGACAACTC+AGG | 0.497729 | 4.3:-45101518 | None:intergenic |
GCTTTCTAATGTTAAAACAT+TGG | 0.503057 | 4.3:+45102348 | MS.gene03752:CDS |
TGTACACTTGTGGGTTTCAA+AGG | 0.503354 | 4.3:+45101685 | MS.gene03752:CDS |
CTAATACTTGACAGTAAGAT+GGG | 0.504263 | 4.3:+45101647 | MS.gene03752:CDS |
TGGTAAATGAAAGTGAAGGT+TGG | 0.505664 | 4.3:-45101483 | None:intergenic |
TAGAATACGCCACAGTTTCA+CGG | 0.516230 | 4.3:-45101994 | None:intergenic |
AATGTTAAAACATTGGCTCT+CGG | 0.516570 | 4.3:+45102355 | MS.gene03752:CDS |
TATGAAGAACTTCAAGTGAC+GGG | 0.519558 | 4.3:-45102204 | None:intergenic |
GTTTCCAACCTCCTCTCTCC+GGG | 0.520079 | 4.3:-45102992 | None:intergenic |
TCTCTTCAATAAGTGAAAAG+AGG | 0.524063 | 4.3:-45102119 | None:intergenic |
ATTCTTCTTTGGACAACTCA+GGG | 0.524121 | 4.3:-45101517 | None:intergenic |
GCGTATTCTATGTTTGATGA+TGG | 0.525386 | 4.3:+45102007 | MS.gene03752:CDS |
TGTACACATGTGGGTTTCAA+AGG | 0.528762 | 4.3:+45101793 | MS.gene03752:CDS |
CCGAAAATATAAGAAAACTA+AGG | 0.538047 | 4.3:+45101738 | MS.gene03752:CDS |
CACTCGTGGTCTTAAAATTG+CGG | 0.539007 | 4.3:+45101903 | MS.gene03752:CDS |
TTCAAAGGCATTAGATCTCA+AGG | 0.542872 | 4.3:+45101808 | MS.gene03752:CDS |
TGGGGATTGTACTCTGCAGT+AGG | 0.548537 | 4.3:-45104294 | None:intergenic |
TGTTATGCAGTTTCTCAGCA+TGG | 0.553413 | 4.3:+45102479 | MS.gene03752:intron |
ATGTGTTCTATCCAAAAGAT+GGG | 0.563690 | 4.3:+45101439 | MS.gene03752:CDS |
GACGGGGCATTAATTTGTAG+TGG | 0.566180 | 4.3:-45102187 | None:intergenic |
TGAAATCAATTCCCGGAGAG+AGG | 0.569941 | 4.3:+45102981 | MS.gene03752:CDS |
AAATATCTGAGAATTGCAGT+TGG | 0.586019 | 4.3:+45102562 | MS.gene03752:CDS |
CAACACTTAATAGAAGAAGT+AGG | 0.587492 | 4.3:-45102163 | None:intergenic |
TACTGCAGAGTACAATCCCC+AGG | 0.588345 | 4.3:+45104296 | MS.gene03752:CDS |
AGACTGGTTGTAAGACATGC+CGG | 0.589947 | 4.3:-45103042 | None:intergenic |
ATATGAAGAACTTCAAGTGA+CGG | 0.594331 | 4.3:-45102205 | None:intergenic |
GGTGGAGCCATCAGTAACTC+CGG | 0.595318 | 4.3:+45103023 | MS.gene03752:CDS |
TCACACGTGGAAAGCTGGAG+CGG | 0.598731 | 4.3:-45101878 | None:intergenic |
AAAAGAAGTTCCTCCAAATG+TGG | 0.603065 | 4.3:-45102067 | None:intergenic |
AAGTGAAAAGAGGTATTGAT+CGG | 0.603172 | 4.3:-45102109 | None:intergenic |
AATTCCCGGAGAGAGGAGGT+TGG | 0.606183 | 4.3:+45102988 | MS.gene03752:CDS |
ACAAGTGTACATCATGTGGC+TGG | 0.606670 | 4.3:-45101673 | None:intergenic |
GCAATTCTCAGATATTTCAA+CGG | 0.608159 | 4.3:-45102556 | None:intergenic |
AGACATGCCGGAGTTACTGA+TGG | 0.614504 | 4.3:-45103030 | None:intergenic |
GGAGGTTGGAAACTCTAGAT+GGG | 0.616468 | 4.3:+45103002 | MS.gene03752:CDS |
GGTATTGATCGGTAATGCAA+AGG | 0.618727 | 4.3:-45102098 | None:intergenic |
TGAAGAGAAGAATTGAGTGT+TGG | 0.626009 | 4.3:-45101938 | None:intergenic |
TCTTCATCTCCGTGAAACTG+TGG | 0.632446 | 4.3:+45101985 | MS.gene03752:CDS |
TTCCACGTGTGAGTCACTCG+TGG | 0.634670 | 4.3:+45101889 | MS.gene03752:CDS |
GGTTGGAAACTCTAGATGGG+TGG | 0.637888 | 4.3:+45103005 | MS.gene03752:CDS |
AGCCACATGATGTACACTTG+TGG | 0.639873 | 4.3:+45101675 | MS.gene03752:CDS |
AATCAATTCCCGGAGAGAGG+AGG | 0.640354 | 4.3:+45102984 | MS.gene03752:CDS |
TTTCTGGTAAATGAAAGTGA+AGG | 0.651983 | 4.3:-45101487 | None:intergenic |
ACATGTGTACATCATGTGAC+TGG | 0.652666 | 4.3:-45101781 | None:intergenic |
AGATGAAGAATCTTTAGTGA+CGG | 0.657169 | 4.3:-45101971 | None:intergenic |
CTCAAGGTCTAACATGCCTG+GGG | 0.668243 | 4.3:-45104312 | None:intergenic |
CTCGTGGTCTTAAAATTGCG+GGG | 0.673910 | 4.3:+45101905 | MS.gene03752:CDS |
GTCACATGATGTACACATGT+GGG | 0.678429 | 4.3:+45101784 | MS.gene03752:CDS |
GACCACGAGTGACTCACACG+TGG | 0.682798 | 4.3:-45101891 | None:intergenic |
ACCCACAAGTGTACATCATG+TGG | 0.692380 | 4.3:-45101677 | None:intergenic |
TATGCAGTTTCTCAGCATGG+AGG | 0.703511 | 4.3:+45102482 | MS.gene03752:intron |
AGTCACATGATGTACACATG+TGG | 0.706369 | 4.3:+45101783 | MS.gene03752:CDS |
ATGAAGAACTTCAAGTGACG+GGG | 0.715969 | 4.3:-45102203 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAAATACAAATGTTAATTTT+TGG | + | chr4.3:45102939-45102958 | MS.gene03752:intron | 10.0% |
!! | AGATAAAATTGTAAGTAAAA+TGG | - | chr4.3:45102871-45102890 | None:intergenic | 15.0% |
!! | ATGACTTCAATTTATTTATT+AGG | - | chr4.3:45104040-45104059 | None:intergenic | 15.0% |
!! | ATGTAATTAAAAAATTTGAG+AGG | - | chr4.3:45103534-45103553 | None:intergenic | 15.0% |
!! | GAATTAATTAATTCGTTTAA+CGG | - | chr4.3:45102786-45102805 | None:intergenic | 15.0% |
!! | TTAAAATCAATAGTTCATAT+TGG | - | chr4.3:45103897-45103916 | None:intergenic | 15.0% |
!!! | AATTATTCAATATTTGTTAC+AGG | + | chr4.3:45103613-45103632 | MS.gene03752:intron | 15.0% |
!! | AAGTAAAATGGTTTAAAAGA+AGG | - | chr4.3:45102859-45102878 | None:intergenic | 20.0% |
!! | CTCATTACATTTGAATTTAA+AGG | + | chr4.3:45103063-45103082 | MS.gene03752:CDS | 20.0% |
!! | GTATACAAATTGTTAAAATC+CGG | - | chr4.3:45102316-45102335 | None:intergenic | 20.0% |
!! | TAATTCAATTGAAGATCATT+TGG | + | chr4.3:45103640-45103659 | MS.gene03752:intron | 20.0% |
!! | TATATATACAATTACATTCG+TGG | + | chr4.3:45103467-45103486 | MS.gene03752:intron | 20.0% |
!!! | CCTTAGTTTTCTTATATTTT+CGG | - | chr4.3:45101741-45101760 | None:intergenic | 20.0% |
!!! | TATTAGTTTGACTATATTCT+CGG | - | chr4.3:45101633-45101652 | None:intergenic | 20.0% |
! | AAATTCAAATGTAATGAGAC+TGG | - | chr4.3:45103061-45103080 | None:intergenic | 25.0% |
! | AAGAACTAGTAAAAGATACA+TGG | + | chr4.3:45102745-45102764 | MS.gene03752:intron | 25.0% |
! | AAGTAGGCATATATAACAAA+AGG | - | chr4.3:45102150-45102169 | None:intergenic | 25.0% |
! | AATATAACACTCCTTCATTA+TGG | - | chr4.3:45104096-45104115 | None:intergenic | 25.0% |
! | AATGAGAATAGAATTGCATA+TGG | - | chr4.3:45102450-45102469 | None:intergenic | 25.0% |
! | AATTTGTATACACTCTTGAA+AGG | + | chr4.3:45102325-45102344 | MS.gene03752:CDS | 25.0% |
! | ACTATATGCTATATATCAGT+TGG | + | chr4.3:45102916-45102935 | MS.gene03752:intron | 25.0% |
! | ATGAATGAAGAACAAAAAAC+AGG | - | chr4.3:45103786-45103805 | None:intergenic | 25.0% |
! | ATGAGAATAGAATTGCATAT+GGG | - | chr4.3:45102449-45102468 | None:intergenic | 25.0% |
! | ATTTGTATACACTCTTGAAA+GGG | + | chr4.3:45102326-45102345 | MS.gene03752:CDS | 25.0% |
! | CCGAAAATATAAGAAAACTA+AGG | + | chr4.3:45101738-45101757 | MS.gene03752:CDS | 25.0% |
! | CTAGCTATCAAAACTTATAT+TGG | + | chr4.3:45103705-45103724 | MS.gene03752:intron | 25.0% |
! | CTTTAGCATATCCAAATATT+GGG | + | chr4.3:45104232-45104251 | MS.gene03752:CDS | 25.0% |
! | GCTTTCTAATGTTAAAACAT+TGG | + | chr4.3:45102348-45102367 | MS.gene03752:CDS | 25.0% |
! | GGTAGTATGTTAATATTTGT+TGG | + | chr4.3:45103350-45103369 | MS.gene03752:intron | 25.0% |
! | TAAAGAATTGGTATCTTCTT+TGG | - | chr4.3:45101588-45101607 | None:intergenic | 25.0% |
! | TAAAGATTGGAATTCTTCTT+TGG | - | chr4.3:45101531-45101550 | None:intergenic | 25.0% |
! | TCAAAACATTAAAACTGAGT+TGG | + | chr4.3:45103089-45103108 | MS.gene03752:CDS | 25.0% |
!! | GAAAATTTGAAATCAATTCC+CGG | + | chr4.3:45102974-45102993 | MS.gene03752:CDS | 25.0% |
!! | GAAACTTACATGAAAAGTTT+TGG | - | chr4.3:45102383-45102402 | None:intergenic | 25.0% |
!! | GAAAGTATATAAACTCTGTA+TGG | - | chr4.3:45103274-45103293 | None:intergenic | 25.0% |
!! | GATCTCAATAATTTTCTATC+TGG | + | chr4.3:45102040-45102059 | MS.gene03752:CDS | 25.0% |
!! | GTATGTTAATATTTGTTGGT+AGG | + | chr4.3:45103354-45103373 | MS.gene03752:intron | 25.0% |
!! | TATAAGACTCTTTTGTTGAT+AGG | - | chr4.3:45101415-45101434 | None:intergenic | 25.0% |
!!! | TAATTTTTGGTTTACATGCA+GGG | + | chr4.3:45102952-45102971 | MS.gene03752:intron | 25.0% |
!!! | TCTGTTTTAATGAAAAGAGT+TGG | + | chr4.3:45103329-45103348 | MS.gene03752:intron | 25.0% |
!!! | TTAATTTTTGGTTTACATGC+AGG | + | chr4.3:45102951-45102970 | MS.gene03752:intron | 25.0% |
!!! | TTTCTGAAGTCATATTTTCT+AGG | - | chr4.3:45102250-45102269 | None:intergenic | 25.0% |
!!! | TTTTGATAGCTAGATTAAGA+GGG | - | chr4.3:45103698-45103717 | None:intergenic | 25.0% |
AAATATCTGAGAATTGCAGT+TGG | + | chr4.3:45102562-45102581 | MS.gene03752:CDS | 30.0% | |
AACATAAGAAGCTGAAAATC+TGG | + | chr4.3:45102709-45102728 | MS.gene03752:intron | 30.0% | |
AACATAGTTGACCCAATATT+TGG | - | chr4.3:45104246-45104265 | None:intergenic | 30.0% | |
AAGAGAAGATGAAAGTTCTA+TGG | - | chr4.3:45103394-45103413 | None:intergenic | 30.0% | |
AATGAGCATATCCATAATGA+AGG | + | chr4.3:45104082-45104101 | MS.gene03752:intron | 30.0% | |
ACTAATACTTGACAGTAAGA+TGG | + | chr4.3:45101646-45101665 | MS.gene03752:CDS | 30.0% | |
AGATGAAGAATCTTTAGTGA+CGG | - | chr4.3:45101974-45101993 | None:intergenic | 30.0% | |
AGTAGAAAAAAGTTTACGCA+AGG | + | chr4.3:45103191-45103210 | MS.gene03752:intron | 30.0% | |
ATATGAAGAACTTCAAGTGA+CGG | - | chr4.3:45102208-45102227 | None:intergenic | 30.0% | |
ATATTAGTATTACCACAGTC+TGG | - | chr4.3:45103836-45103855 | None:intergenic | 30.0% | |
ATCTTCTTTGGCTATATTCT+CGG | - | chr4.3:45101576-45101595 | None:intergenic | 30.0% | |
ATGTGTTCTATCCAAAAGAT+GGG | + | chr4.3:45101439-45101458 | MS.gene03752:CDS | 30.0% | |
CAACACTTAATAGAAGAAGT+AGG | - | chr4.3:45102166-45102185 | None:intergenic | 30.0% | |
CTAATACTTGACAGTAAGAT+GGG | + | chr4.3:45101647-45101666 | MS.gene03752:CDS | 30.0% | |
GCAATTCTCAGATATTTCAA+CGG | - | chr4.3:45102559-45102578 | None:intergenic | 30.0% | |
GCTTTAGCATATCCAAATAT+TGG | + | chr4.3:45104231-45104250 | MS.gene03752:CDS | 30.0% | |
GTAGAAAAAAGTTTACGCAA+GGG | + | chr4.3:45103192-45103211 | MS.gene03752:intron | 30.0% | |
TAGAAAAAAGTTTACGCAAG+GGG | + | chr4.3:45103193-45103212 | MS.gene03752:intron | 30.0% | |
TCTCTTCAATAAGTGAAAAG+AGG | - | chr4.3:45102122-45102141 | None:intergenic | 30.0% | |
! | AATGTGAAGTTGATTGGAAT+CGG | + | chr4.3:45104118-45104137 | MS.gene03752:intron | 30.0% |
! | ATTGCAAGATCCTTAAGTTT+TGG | - | chr4.3:45102618-45102637 | None:intergenic | 30.0% |
! | TATTGCAATGTGAAGTTGAT+TGG | + | chr4.3:45104112-45104131 | MS.gene03752:intron | 30.0% |
! | TTTACAAGCAAGTCTTATGT+AGG | - | chr4.3:45103931-45103950 | None:intergenic | 30.0% |
! | TTTCTGGTAAATGAAAGTGA+AGG | - | chr4.3:45101490-45101509 | None:intergenic | 30.0% |
!! | AAGTGAAAAGAGGTATTGAT+CGG | - | chr4.3:45102112-45102131 | None:intergenic | 30.0% |
!! | AATGTTAAAACATTGGCTCT+CGG | + | chr4.3:45102355-45102374 | MS.gene03752:CDS | 30.0% |
!! | GTTTTGATAGCTAGATTAAG+AGG | - | chr4.3:45103699-45103718 | None:intergenic | 30.0% |
AAAAGAAGTTCCTCCAAATG+TGG | - | chr4.3:45102070-45102089 | None:intergenic | 35.0% | |
AAGACATAAAGCTGTGTTGA+TGG | - | chr4.3:45103440-45103459 | None:intergenic | 35.0% | |
AATTCGTACCCATACTAGTA+AGG | - | chr4.3:45103232-45103251 | None:intergenic | 35.0% | |
AATTCTTCTTTGGACAACTC+AGG | - | chr4.3:45101521-45101540 | None:intergenic | 35.0% | |
ACAGAATGCTCCAAAACTTA+AGG | + | chr4.3:45102605-45102624 | MS.gene03752:CDS | 35.0% | |
ACTTAAGGATCTTGCAATTG+CGG | + | chr4.3:45102620-45102639 | MS.gene03752:CDS | 35.0% | |
AGAAATCCTCCTTACTAGTA+TGG | + | chr4.3:45103220-45103239 | MS.gene03752:intron | 35.0% | |
AGTGGTCTTCATTGAAATCT+TGG | - | chr4.3:45103672-45103691 | None:intergenic | 35.0% | |
ATTCTTCTTTGGACAACTCA+GGG | - | chr4.3:45101520-45101539 | None:intergenic | 35.0% | |
CATGTGTTCTATCCAAAAGA+TGG | + | chr4.3:45101438-45101457 | MS.gene03752:CDS | 35.0% | |
GAAAGCAAGCTGTAAAGAAT+TGG | - | chr4.3:45101600-45101619 | None:intergenic | 35.0% | |
GAAATCCTCCTTACTAGTAT+GGG | + | chr4.3:45103221-45103240 | MS.gene03752:intron | 35.0% | |
GCGTATTCTATGTTTGATGA+TGG | + | chr4.3:45102007-45102026 | MS.gene03752:CDS | 35.0% | |
GGACAGCAAGATTTAAAGAT+TGG | - | chr4.3:45101544-45101563 | None:intergenic | 35.0% | |
GGTAAATGAAAGTGAAGGTT+GGG | - | chr4.3:45101485-45101504 | None:intergenic | 35.0% | |
TATGAAGAACTTCAAGTGAC+GGG | - | chr4.3:45102207-45102226 | None:intergenic | 35.0% | |
TCACTCAAGTAAGTTACAGA+AGG | + | chr4.3:45103134-45103153 | MS.gene03752:intron | 35.0% | |
TGAAGAGAAGAATTGAGTGT+TGG | - | chr4.3:45101941-45101960 | None:intergenic | 35.0% | |
TGCATATGGGAGACTAAATA+TGG | - | chr4.3:45102436-45102455 | None:intergenic | 35.0% | |
TGGTAAATGAAAGTGAAGGT+TGG | - | chr4.3:45101486-45101505 | None:intergenic | 35.0% | |
! | ATTTGTTGGTAGGATGTTGT+GGG | + | chr4.3:45103364-45103383 | MS.gene03752:intron | 35.0% |
! | CTTGCAGCTTAATTGATTCA+AGG | - | chr4.3:45104272-45104291 | None:intergenic | 35.0% |
! | TATTTGTTGGTAGGATGTTG+TGG | + | chr4.3:45103363-45103382 | MS.gene03752:intron | 35.0% |
!! | TTATATTTTCGGTGCGTCTT+AGG | - | chr4.3:45101730-45101749 | None:intergenic | 35.0% |
!! | TTCAAAGGCATTAGATCTCA+AGG | + | chr4.3:45101808-45101827 | MS.gene03752:CDS | 35.0% |
!!! | GCGGCAATAAAACTTTTTCA+TGG | - | chr4.3:45101862-45101881 | None:intergenic | 35.0% |
AAAGTGAAGGTTGGGAATCT+TGG | - | chr4.3:45101477-45101496 | None:intergenic | 40.0% | |
ACATGTGTACATCATGTGAC+TGG | - | chr4.3:45101784-45101803 | None:intergenic | 40.0% | |
AGTCACATGATGTACACATG+TGG | + | chr4.3:45101783-45101802 | MS.gene03752:CDS | 40.0% | |
ATGAAGAACTTCAAGTGACG+GGG | - | chr4.3:45102206-45102225 | None:intergenic | 40.0% | |
GGTCTTCATTGAAATCTTGG+AGG | - | chr4.3:45103669-45103688 | None:intergenic | 40.0% | |
GTCACATGATGTACACATGT+GGG | + | chr4.3:45101784-45101803 | MS.gene03752:CDS | 40.0% | |
TAGAATACGCCACAGTTTCA+CGG | - | chr4.3:45101997-45102016 | None:intergenic | 40.0% | |
TCTATCTGGTTGTCCACATT+TGG | + | chr4.3:45102054-45102073 | MS.gene03752:CDS | 40.0% | |
TGTACACATGTGGGTTTCAA+AGG | + | chr4.3:45101793-45101812 | MS.gene03752:CDS | 40.0% | |
TGTACACTTGTGGGTTTCAA+AGG | + | chr4.3:45101685-45101704 | MS.gene03752:CDS | 40.0% | |
TGTTATGCAGTTTCTCAGCA+TGG | + | chr4.3:45102479-45102498 | MS.gene03752:intron | 40.0% | |
! | AACTCAGGGTCTGAAATTTC+TGG | - | chr4.3:45101506-45101525 | None:intergenic | 40.0% |
! | ACTCGTGGTCTTAAAATTGC+GGG | + | chr4.3:45101904-45101923 | MS.gene03752:CDS | 40.0% |
! | CACTCGTGGTCTTAAAATTG+CGG | + | chr4.3:45101903-45101922 | MS.gene03752:CDS | 40.0% |
! | TTTGTTGGTAGGATGTTGTG+GGG | + | chr4.3:45103365-45103384 | MS.gene03752:intron | 40.0% |
!! | CATAAAGCTGTGTTGATGGT+CGG | - | chr4.3:45103436-45103455 | None:intergenic | 40.0% |
!! | CTAAGGCTTGATAGCGAAAA+AGG | + | chr4.3:45101755-45101774 | MS.gene03752:CDS | 40.0% |
!! | GGTATTGATCGGTAATGCAA+AGG | - | chr4.3:45102101-45102120 | None:intergenic | 40.0% |
AAGAGCAGCTTCATCGAGAT+TGG | - | chr4.3:45102278-45102297 | None:intergenic | 45.0% | |
AAGGATCTTGCAATTGCGGT+TGG | + | chr4.3:45102624-45102643 | MS.gene03752:CDS | 45.0% | |
ACAAGTGTACATCATGTGGC+TGG | - | chr4.3:45101676-45101695 | None:intergenic | 45.0% | |
ACAGATCCAAGTCAAGTTCC+TGG | - | chr4.3:45101835-45101854 | None:intergenic | 45.0% | |
ACCCACAAGTGTACATCATG+TGG | - | chr4.3:45101680-45101699 | None:intergenic | 45.0% | |
AGCCACATGATGTACACTTG+TGG | + | chr4.3:45101675-45101694 | MS.gene03752:CDS | 45.0% | |
AGGAGGTTGGAAACTCTAGA+TGG | + | chr4.3:45103001-45103020 | MS.gene03752:CDS | 45.0% | |
ATCTGGTTGTCCACATTTGG+AGG | + | chr4.3:45102057-45102076 | MS.gene03752:CDS | 45.0% | |
GCCACATGATGTACACTTGT+GGG | + | chr4.3:45101676-45101695 | MS.gene03752:CDS | 45.0% | |
GCTAGATTAAGAGGGTTGAG+TGG | - | chr4.3:45103690-45103709 | None:intergenic | 45.0% | |
GGAGGTTGGAAACTCTAGAT+GGG | + | chr4.3:45103002-45103021 | MS.gene03752:CDS | 45.0% | |
TATGCAGTTTCTCAGCATGG+AGG | + | chr4.3:45102482-45102501 | MS.gene03752:intron | 45.0% | |
TCGTACCCATACTAGTAAGG+AGG | - | chr4.3:45103229-45103248 | None:intergenic | 45.0% | |
TCTTCATCTCCGTGAAACTG+TGG | + | chr4.3:45101985-45102004 | MS.gene03752:CDS | 45.0% | |
TCTTTGCATTTGCAAGCGTC+CGG | + | chr4.3:45102294-45102313 | MS.gene03752:CDS | 45.0% | |
TGAAATCAATTCCCGGAGAG+AGG | + | chr4.3:45102981-45103000 | MS.gene03752:CDS | 45.0% | |
! | AGACTGGTTGTAAGACATGC+CGG | - | chr4.3:45103045-45103064 | None:intergenic | 45.0% |
! | CTATATTCTCGGAGCGTCTT+AGG | - | chr4.3:45101565-45101584 | None:intergenic | 45.0% |
! | CTATATTCTCGGAGCGTCTT+TGG | - | chr4.3:45101565-45101584 | None:intergenic | 45.0% |
! | CTCGTGGTCTTAAAATTGCG+GGG | + | chr4.3:45101905-45101924 | MS.gene03752:CDS | 45.0% |
! | TTGTTGGTAGGATGTTGTGG+GGG | + | chr4.3:45103366-45103385 | MS.gene03752:intron | 45.0% |
!! | GACGGGGCATTAATTTGTAG+TGG | - | chr4.3:45102190-45102209 | None:intergenic | 45.0% |
AATCAATTCCCGGAGAGAGG+AGG | + | chr4.3:45102984-45103003 | MS.gene03752:CDS | 50.0% | |
AGACATGCCGGAGTTACTGA+TGG | - | chr4.3:45103033-45103052 | None:intergenic | 50.0% | |
AGTACAAGTCAGCCAGACTG+TGG | + | chr4.3:45103821-45103840 | MS.gene03752:intron | 50.0% | |
AGTTTCCAACCTCCTCTCTC+CGG | - | chr4.3:45102996-45103015 | None:intergenic | 50.0% | |
CAAGGTCCAGGAACTTGACT+TGG | + | chr4.3:45101826-45101845 | MS.gene03752:CDS | 50.0% | |
GGCATTAGATCTCAAGGTCC+AGG | + | chr4.3:45101814-45101833 | MS.gene03752:CDS | 50.0% | |
GGTTGGAAACTCTAGATGGG+TGG | + | chr4.3:45103005-45103024 | MS.gene03752:CDS | 50.0% | |
TACTGCAGAGTACAATCCCC+AGG | + | chr4.3:45104296-45104315 | MS.gene03752:CDS | 50.0% | |
TGGGGATTGTACTCTGCAGT+AGG | - | chr4.3:45104297-45104316 | None:intergenic | 50.0% | |
!! | GCAGATCGACTCCCATCTTT+TGG | - | chr4.3:45101453-45101472 | None:intergenic | 50.0% |
AATTCCCGGAGAGAGGAGGT+TGG | + | chr4.3:45102988-45103007 | MS.gene03752:CDS | 55.0% | |
GGTGGAGCCATCAGTAACTC+CGG | + | chr4.3:45103023-45103042 | MS.gene03752:CDS | 55.0% | |
GTGACTCACACGTGGAAAGC+TGG | - | chr4.3:45101886-45101905 | None:intergenic | 55.0% | |
GTTTCCAACCTCCTCTCTCC+GGG | - | chr4.3:45102995-45103014 | None:intergenic | 55.0% | |
TCACACGTGGAAAGCTGGAG+CGG | - | chr4.3:45101881-45101900 | None:intergenic | 55.0% | |
TTCCACGTGTGAGTCACTCG+TGG | + | chr4.3:45101889-45101908 | MS.gene03752:CDS | 55.0% | |
!! | GTCTGGCTGACTTGTACTGC+TGG | - | chr4.3:45103819-45103838 | None:intergenic | 55.0% |
GACCACGAGTGACTCACACG+TGG | - | chr4.3:45101894-45101913 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 45101338 | 45104326 | 45101338 | ID=MS.gene03752 |
chr4.3 | mRNA | 45101338 | 45104326 | 45101338 | ID=MS.gene03752.t1;Parent=MS.gene03752 |
chr4.3 | exon | 45101338 | 45102393 | 45101338 | ID=MS.gene03752.t1.exon1;Parent=MS.gene03752.t1 |
chr4.3 | CDS | 45101338 | 45102393 | 45101338 | ID=cds.MS.gene03752.t1;Parent=MS.gene03752.t1 |
chr4.3 | exon | 45102489 | 45102656 | 45102489 | ID=MS.gene03752.t1.exon2;Parent=MS.gene03752.t1 |
chr4.3 | CDS | 45102489 | 45102656 | 45102489 | ID=cds.MS.gene03752.t1;Parent=MS.gene03752.t1 |
chr4.3 | exon | 45102973 | 45103141 | 45102973 | ID=MS.gene03752.t1.exon3;Parent=MS.gene03752.t1 |
chr4.3 | CDS | 45102973 | 45103141 | 45102973 | ID=cds.MS.gene03752.t1;Parent=MS.gene03752.t1 |
chr4.3 | exon | 45104184 | 45104326 | 45104184 | ID=MS.gene03752.t1.exon4;Parent=MS.gene03752.t1 |
chr4.3 | CDS | 45104184 | 45104326 | 45104184 | ID=cds.MS.gene03752.t1;Parent=MS.gene03752.t1 |
Gene Sequence |
Protein sequence |